AlfalfaGEDB | MsG0580026179.01

M. sativa cultivar ZhongmuNo.1 / MsG0580026179.01

KEGG: K01166
GO: GO:0003723 GO:0033897
PFAM: PF00445

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026179.01.T01	XP_003613797.1	90.336	238	13	1	1	238	1	228	4.61E-145	414

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026179.01.T01	P42815	57.511	233	88	2	6	238	1	222	4.79E-100	293

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026179.01.T01	G7KFA9	90.336	238	13	1	1	238	1	228	2.20e-145	414

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047899.01	MsG0580026179.01	0.872809	2.389847e-67	1.013647e-63
MsG0080049040.01	MsG0580026179.01	0.812188	4.808232e-51	3.036627e-48
MsG0080049068.01	MsG0580026179.01	0.818728	1.684344e-52	1.270909e-49
MsG0180000292.01	MsG0580026179.01	0.865795	4.556062e-65	1.501229e-61
MsG0180000404.01	MsG0580026179.01	0.830248	3.268238e-55	3.424693e-52
MsG0180000670.01	MsG0580026179.01	0.812452	4.208730e-51	2.677206e-48
MsG0180001085.01	MsG0580026179.01	0.808519	2.976844e-50	1.705690e-47
MsG0180002929.01	MsG0580026179.01	0.819352	1.215029e-52	9.326810e-50
MsG0180003741.01	MsG0580026179.01	0.839873	1.221435e-57	1.709460e-54
MsG0180004541.01	MsG0580026179.01	0.822891	1.858486e-53	1.575706e-50
MsG0180005039.01	MsG0580026179.01	0.811582	6.515047e-51	4.048086e-48
MsG0180005113.01	MsG0580026179.01	0.802881	4.545928e-49	2.252086e-46
MsG0180005485.01	MsG0580026179.01	0.841553	4.430261e-58	6.533344e-55
MsG0180005750.01	MsG0580026179.01	0.805977	1.028750e-49	5.518623e-47
MsG0180005807.01	MsG0580026179.01	0.816157	6.391724e-52	4.494468e-49
MsG0280010611.01	MsG0580026179.01	0.836993	6.754753e-57	8.656078e-54
MsG0480019221.01	MsG0580026179.01	0.832693	8.171969e-56	9.203762e-53
MsG0480019340.01	MsG0580026179.01	0.852929	3.342032e-61	7.097089e-58
MsG0480020315.01	MsG0580026179.01	0.881535	2.214828e-70	1.302577e-66
MsG0480020517.01	MsG0580026179.01	0.867770	1.071491e-65	3.784931e-62
MsG0480020690.01	MsG0580026179.01	0.825294	5.071129e-54	4.603422e-51
MsG0480021060.01	MsG0580026179.01	0.835336	1.780588e-56	2.170991e-53
MsG0480021814.01	MsG0580026179.01	0.805097	1.573202e-49	8.250481e-47
MsG0480021894.01	MsG0580026179.01	0.837603	4.716715e-57	6.158276e-54
MsG0480022149.01	MsG0580026179.01	0.804508	2.088585e-49	1.078781e-46
MsG0480022260.01	MsG0580026179.01	0.801576	8.436180e-49	4.042828e-46
MsG0480022355.01	MsG0580026179.01	0.810604	1.061369e-50	6.426213e-48
MsG0480023054.01	MsG0580026179.01	0.805738	1.154741e-49	6.156931e-47
MsG0480023661.01	MsG0580026179.01	0.802397	5.719080e-49	2.798710e-46
MsG0580024443.01	MsG0580026179.01	0.801779	7.666441e-49	3.692809e-46
MsG0580024533.01	MsG0580026179.01	0.803806	2.923617e-49	1.483135e-46
MsG0580024966.01	MsG0580026179.01	0.812021	5.228078e-51	3.286749e-48
MsG0580025411.01	MsG0580026179.01	0.811493	6.812114e-51	4.222979e-48
MsG0580025502.01	MsG0580026179.01	0.839759	1.307597e-57	1.823490e-54
MsG0580025561.01	MsG0580026179.01	-0.808118	3.623454e-50	2.054466e-47
MsG0580025607.01	MsG0580026179.01	0.860742	1.670266e-63	4.613929e-60
MsG0580025668.01	MsG0580026179.01	0.855482	6.126409e-62	1.416513e-58
MsG0580025828.01	MsG0580026179.01	0.860266	2.327923e-63	6.325613e-60
MsG0580025971.01	MsG0580026179.01	0.832588	8.674860e-56	9.739652e-53
MsG0380015693.01	MsG0580026179.01	0.829126	6.129746e-55	6.216307e-52
MsG0380015896.01	MsG0580026179.01	0.807292	5.427194e-50	3.011462e-47
MsG0380016192.01	MsG0580026179.01	0.853227	2.746623e-61	5.893289e-58
MsG0380016864.01	MsG0580026179.01	0.823055	1.701785e-53	1.449626e-50
MsG0380017087.01	MsG0580026179.01	0.801707	7.930802e-49	3.813180e-46
MsG0380017423.01	MsG0580026179.01	0.818635	1.768903e-52	1.331251e-49
MsG0380018069.01	MsG0580026179.01	0.800868	1.177793e-48	5.544393e-46
MsG0480018200.01	MsG0580026179.01	0.828880	7.030342e-55	7.077382e-52
MsG0580026179.01	MsG0580027394.01	0.807498	4.909206e-50	2.738678e-47
MsG0580026179.01	MsG0580027763.01	0.853672	2.047096e-61	4.457545e-58
MsG0580026179.01	MsG0580029310.01	0.824166	9.352629e-54	8.220134e-51
MsG0580026179.01	MsG0580029529.01	0.823739	1.177523e-53	1.022705e-50
MsG0580026179.01	MsG0680030784.01	0.810752	9.857815e-51	5.992385e-48
MsG0580026179.01	MsG0680030908.01	0.878895	1.938946e-69	1.029695e-65
MsG0580026179.01	MsG0680031959.01	0.801836	7.461199e-49	3.599328e-46
MsG0580026179.01	MsG0680032651.01	0.806011	1.011982e-49	5.433427e-47
MsG0580026179.01	MsG0680033377.01	0.816785	4.624422e-52	3.308092e-49
MsG0580026179.01	MsG0680034750.01	0.803030	4.234645e-49	2.105812e-46
MsG0580026179.01	MsG0680034767.01	0.813948	1.976130e-51	1.308431e-48
MsG0580026179.01	MsG0780035992.01	0.846942	1.581623e-59	2.766799e-56
MsG0580026179.01	MsG0780036243.01	0.840546	8.147882e-58	1.164517e-54
MsG0580026179.01	MsG0780036307.01	0.826667	2.392142e-54	2.258114e-51
MsG0580026179.01	MsG0780037341.01	0.837654	4.576307e-57	5.984931e-54
MsG0580026179.01	MsG0780037395.01	0.843992	9.961148e-59	1.585842e-55
MsG0580026179.01	MsG0780038784.01	0.835526	1.594377e-56	1.954722e-53
MsG0580026179.01	MsG0780038846.01	0.821343	4.247128e-53	3.446170e-50
MsG0580026179.01	MsG0780039675.01	0.819789	9.655159e-53	7.503567e-50
MsG0580026179.01	MsG0780041138.01	0.808489	3.021079e-50	1.729688e-47
MsG0580026179.01	MsG0780041259.01	0.835519	1.601040e-56	1.962526e-53
MsG0580026179.01	MsG0880042555.01	0.812534	4.040009e-51	2.575318e-48
MsG0580026179.01	MsG0880042958.01	0.808271	3.361018e-50	1.913466e-47
MsG0580026179.01	MsG0880043174.01	0.825577	4.344323e-54	3.975434e-51
MsG0580026179.01	MsG0880044392.01	0.805321	1.412515e-49	7.450528e-47
MsG0580026179.01	MsG0880044704.01	0.856127	3.968916e-62	9.375088e-59
MsG0580026179.01	MsG0880045101.01	0.808998	2.350955e-50	1.364136e-47
MsG0580026179.01	MsG0880045558.01	0.849177	3.822320e-60	7.186664e-57
MsG0580026179.01	MsG0880045668.01	0.819451	1.153403e-52	8.879232e-50
MsG0580026179.01	MsG0880046765.01	0.800119	1.673261e-48	7.728369e-46
MsG0580026179.01	MsG0880047422.01	-0.814055	1.871953e-51	1.243059e-48
MsG0580026179.01	MsG0880047442.01	0.832791	7.727697e-56	8.728588e-53
MsG0280007075.01	MsG0580026179.01	0.847086	1.444244e-59	2.538494e-56
MsG0280007432.01	MsG0580026179.01	0.820040	8.463173e-53	6.623441e-50
MsG0280007750.01	MsG0580026179.01	0.821961	3.056650e-53	2.523688e-50
MsG0280008390.01	MsG0580026179.01	0.827602	1.429218e-54	1.386206e-51
MsG0280008418.01	MsG0580026179.01	0.824522	7.713471e-54	6.848896e-51
MsG0280009756.01	MsG0580026179.01	0.800483	1.411352e-48	6.578979e-46
MsG0280010353.01	MsG0580026179.01	0.803597	3.231144e-49	1.630442e-46
MsG0280010503.01	MsG0580026179.01	0.821216	4.543367e-53	3.673733e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026179.01.T01	MTR_5g041040	90.336	238	13	1	1	238	1	228	5.58e-149	414
MsG0580026179.01.T01	MTR_5g041010	68.908	238	63	2	1	238	1	227	2.24e-120	342
MsG0580026179.01.T01	MTR_5g041080	71.130	239	58	2	1	238	1	229	1.61e-118	337
MsG0580026179.01.T01	MTR_5g041095	68.619	239	63	3	1	238	1	228	5.37e-106	305
MsG0580026179.01.T01	MTR_5g040940	57.009	214	82	1	25	238	25	228	1.31e-91	269
MsG0580026179.01.T01	MTR_5g040960	55.745	235	91	4	7	238	6	230	1.32e-89	264
MsG0580026179.01.T01	MTR_3g030640	35.176	199	115	9	43	236	79	268	1.74e-25	100
MsG0580026179.01.T01	MTR_3g030660	34.673	199	116	10	43	236	84	273	2.83e-24	97.8
MsG0580026179.01.T01	MTR_8g028080	36.139	202	95	7	26	204	41	231	9.13e-24	97.1
MsG0580026179.01.T01	MTR_5g086410	30.332	211	135	9	30	236	12	214	3.09e-21	88.6
MsG0580026179.01.T01	MTR_0129s0080	29.464	224	136	8	6	222	3	211	4.39e-21	88.6
MsG0580026179.01.T01	MTR_2g021750	33.708	178	107	7	46	222	165	332	1.26e-20	89.4
MsG0580026179.01.T01	MTR_6g071425	33.168	202	122	8	43	235	83	280	2.76e-20	87.4
MsG0580026179.01.T01	MTR_2g021830	32.597	181	105	8	46	224	14	179	1.72e-19	83.2
MsG0580026179.01.T01	MTR_5g086770	32.903	155	93	4	69	221	62	207	4.06e-18	80.5
MsG0580026179.01.T01	MTR_6g071505	33.005	203	117	8	43	235	76	269	1.71e-17	79.7
MsG0580026179.01.T01	MTR_2g104370	33.824	136	79	4	96	221	52	186	2.19e-17	77.8
MsG0580026179.01.T01	MTR_4g057825	28.910	211	120	10	28	236	21	203	1.03e-16	76.3
MsG0580026179.01.T01	MTR_6g090200	27.542	236	136	11	3	235	1	204	2.02e-16	75.5
MsG0580026179.01.T01	MTR_2g021910	28.037	214	128	9	21	232	534	723	2.65e-14	72.0
MsG0580026179.01.T01	MTR_2g021910	30.500	200	114	9	14	212	230	405	3.20e-14	72.0
MsG0580026179.01.T01	MTR_0002s1200	30.500	200	126	8	42	236	108	299	4.21e-14	70.5
MsG0580026179.01.T01	MTR_1g048200	28.141	199	114	9	43	222	109	297	1.35e-13	69.3
MsG0580026179.01.T01	MTR_5g022810	24.554	224	147	10	30	236	11	229	6.22e-12	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026179.01.T01	AT1G26820	57.511	233	88	2	6	238	1	222	4.89e-101	293
MsG0580026179.01.T01	AT1G14220	55.794	233	92	2	6	238	7	228	2.74e-96	281
MsG0580026179.01.T01	AT2G02990	51.695	236	104	1	3	238	5	230	1.50e-89	264
MsG0580026179.01.T01	AT1G14210	45.690	232	111	4	9	236	6	226	6.73e-67	207
MsG0580026179.01.T01	AT2G39780	36.842	228	116	10	24	238	28	240	2.10e-33	121
MsG0580026179.01.T01	AT2G39780	30.837	227	99	10	24	238	28	208	1.98e-18	81.3

Find 47 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACATGTGTGCGGACATTTC+TGG	0.161608	5:+31857426	MsG0580026179.01.T01:CDS
TTAAGGACTTGGAAAATAAT+TGG	0.199378	5:+31856891	MsG0580026179.01.T01:CDS
GTGGAGTAAAATTTATTATC+TGG	0.272659	5:-31857306	None:intergenic
TCTCTATTACATTCTATTCC+TGG	0.336181	5:-31857372	None:intergenic
CTGAAAATGTATCTTCAATA+AGG	0.341118	5:+31857609	MsG0580026179.01.T01:three_prime_UTR
ATAGATCTCAGACCTTATTA+AGG	0.345632	5:+31856874	MsG0580026179.01.T01:intron
CTCAGACCTTATTAAGGACT+TGG	0.350106	5:+31856880	MsG0580026179.01.T01:CDS
AAGTGTCTTTGATAAATCTA+AGG	0.352998	5:+31856752	MsG0580026179.01.T01:CDS
TCTTGTAACCTGCATTCTTA+AGG	0.363598	5:-31857063	None:intergenic
ACATGTGTGCGGACATTTCT+GGG	0.368274	5:+31857427	MsG0580026179.01.T01:CDS
AAATAAATTTACTTAAAACT+TGG	0.373695	5:-31857511	None:intergenic
AATAAATTTACTTAAAACTT+GGG	0.399663	5:-31857510	None:intergenic
CTCTATTACATTCTATTCCT+GGG	0.404362	5:-31857371	None:intergenic
AACCTGCATTCTTAAGGATC+TGG	0.416497	5:-31857057	None:intergenic
AGTGAAATACCATTGCTACT+AGG	0.448454	5:-31856929	None:intergenic
GTGAAATACCATTGCTACTA+GGG	0.468797	5:-31856928	None:intergenic
CTCCAGATCCTTAAGAATGC+AGG	0.469885	5:+31857055	MsG0580026179.01.T01:CDS
GAGTGCCCTGGTCTTCCAAT+GGG	0.481203	5:+31857462	MsG0580026179.01.T01:CDS
AATCAAATTCTTGAGCAGAA+AGG	0.483669	5:-31856422	None:intergenic
TTTGAGTCACAGATTGCTCC+TGG	0.486696	5:-31856621	None:intergenic
ATACCCTGTAGCCTGTTGTA+TGG	0.491172	5:-31857346	None:intergenic
TTTCACTATGGTCACATGAA+TGG	0.494000	5:+31856945	MsG0580026179.01.T01:CDS
TGAGTGCCCTGGTCTTCCAA+TGG	0.494252	5:+31857461	MsG0580026179.01.T01:CDS
CAGCTACCCATTGGAAGACC+AGG	0.504798	5:-31857468	None:intergenic
CTTAGGCCTAACTTCAATGA+TGG	0.510786	5:+31856702	MsG0580026179.01.T01:CDS
CTACTAGGGCAGCTCAAAGA+TGG	0.516232	5:-31856914	None:intergenic
TTGCTAATGATGCAGTGGCC+AGG	0.521593	5:+31856603	MsG0580026179.01.T01:CDS
GATGATCCATCATTGAAGTT+AGG	0.526231	5:-31856708	None:intergenic
GTAGCAATGGTATTTCACTA+TGG	0.532633	5:+31856933	MsG0580026179.01.T01:CDS
TCAAAATTCATTGAGTGCCC+TGG	0.537116	5:+31857450	MsG0580026179.01.T01:CDS
ATATTGAAGTATCAAAAGCT+TGG	0.542439	5:-31856385	None:intergenic
ACATGTAAACTTGATAAAGC+TGG	0.553440	5:-31857410	None:intergenic
GATGCCATACAACAGGCTAC+AGG	0.561281	5:+31857342	MsG0580026179.01.T01:CDS
ATAAATTTACTTAAAACTTG+GGG	0.568252	5:-31857509	None:intergenic
TTGAGCTGCCCTAGTAGCAA+TGG	0.583698	5:+31856920	MsG0580026179.01.T01:CDS
TTAGCGCCACAGCTACCCAT+TGG	0.584200	5:-31857477	None:intergenic
GGTCTTCCAATGGGTAGCTG+TGG	0.598566	5:+31857471	MsG0580026179.01.T01:CDS
GGCATCTAAAATGTTACCTG+TGG	0.603734	5:-31857325	None:intergenic
TTATCAAGTTTACATGTGTG+CGG	0.617597	5:+31857416	MsG0580026179.01.T01:CDS
ATGCCATACAACAGGCTACA+GGG	0.622104	5:+31857343	MsG0580026179.01.T01:CDS
CAGGCTACAGGGTATTCCCC+AGG	0.622346	5:+31857354	MsG0580026179.01.T01:CDS
TCTATTACATTCTATTCCTG+GGG	0.626261	5:-31857370	None:intergenic
GTTAGGCCTAAGTCCAGCAA+TGG	0.644262	5:-31856691	None:intergenic
TTAATTTGCTAATGATGCAG+TGG	0.649424	5:+31856598	MsG0580026179.01.T01:CDS
GCAATGGTAAAATCTGCTGT+CGG	0.669210	5:-31856675	None:intergenic
AGCTACCCATTGGAAGACCA+GGG	0.682922	5:-31857467	None:intergenic
TCACATGAATGGATGAAACA+TGG	0.720853	5:+31856956	MsG0580026179.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAATTTACTTAAAACT+TGG	-	Chr5:31857514-31857533	None:intergenic	10.0%
!!	AATAAATTTACTTAAAACTT+GGG	-	Chr5:31857513-31857532	None:intergenic	10.0%
!!!	AATTAAATGATTAGAAATTT+TGG	-	Chr5:31857264-31857283	None:intergenic	10.0%
!!!	TATTTTTATTATATAGAACA+TGG	+	Chr5:31857529-31857548	MsG0580026179.01.T01:three_prime_UTR	10.0%
!!	ATAAATTTACTTAAAACTTG+GGG	-	Chr5:31857512-31857531	None:intergenic	15.0%
!!	ATTTAATTGCATTGAATTTC+AGG	+	Chr5:31857276-31857295	MsG0580026179.01.T01:intron	20.0%
!!	TTTAATTGCATTGAATTTCA+GGG	+	Chr5:31857277-31857296	MsG0580026179.01.T01:intron	20.0%
!!!	ACTTTTAATATTACAGTTTG+AGG	-	Chr5:31856736-31856755	None:intergenic	20.0%
!!!	CTTTTAATATTACAGTTTGA+GGG	-	Chr5:31856735-31856754	None:intergenic	20.0%
!	AAGTGTCTTTGATAAATCTA+AGG	+	Chr5:31856752-31856771	MsG0580026179.01.T01:CDS	25.0%
!	CTGAAAATGTATCTTCAATA+AGG	+	Chr5:31857609-31857628	MsG0580026179.01.T01:three_prime_UTR	25.0%
!	GTGGAGTAAAATTTATTATC+TGG	-	Chr5:31857309-31857328	None:intergenic	25.0%
!	GTTACATAAGTAATCATCAA+AGG	-	Chr5:31857102-31857121	None:intergenic	25.0%
!	TTAAGGACTTGGAAAATAAT+TGG	+	Chr5:31856891-31856910	MsG0580026179.01.T01:CDS	25.0%
!!	ATATTGAAGTATCAAAAGCT+TGG	-	Chr5:31856388-31856407	None:intergenic	25.0%
!!	GATAATAAATTTTACTCCAC+AGG	+	Chr5:31857309-31857328	MsG0580026179.01.T01:CDS	25.0%
!!	TATTTTCCAAGTCCTTAATA+AGG	-	Chr5:31856889-31856908	None:intergenic	25.0%
!!	TTTCTTCTATTTTATTCTGC+AGG	+	Chr5:31856443-31856462	MsG0580026179.01.T01:CDS	25.0%
	AAGCTTGGACAAAAATGAAA+TGG	-	Chr5:31856373-31856392	None:intergenic	30.0%
	AATCAAATTCTTGAGCAGAA+AGG	-	Chr5:31856425-31856444	None:intergenic	30.0%
	ACATGTAAACTTGATAAAGC+TGG	-	Chr5:31857413-31857432	None:intergenic	30.0%
	ATAGATCTCAGACCTTATTA+AGG	+	Chr5:31856874-31856893	MsG0580026179.01.T01:intron	30.0%
	CTCTATTACATTCTATTCCT+GGG	-	Chr5:31857374-31857393	None:intergenic	30.0%
	TCTATTACATTCTATTCCTG+GGG	-	Chr5:31857373-31857392	None:intergenic	30.0%
	TCTCTATTACATTCTATTCC+TGG	-	Chr5:31857375-31857394	None:intergenic	30.0%
	TTATCAAGTTTACATGTGTG+CGG	+	Chr5:31857416-31857435	MsG0580026179.01.T01:CDS	30.0%
!	TGTTTTCTCTTTCTCTTGAA+AGG	-	Chr5:31856330-31856349	None:intergenic	30.0%
!	TTTCTCTTGAAAGGAGTTTT+TGG	-	Chr5:31856321-31856340	None:intergenic	30.0%
!!	TTAATTTGCTAATGATGCAG+TGG	+	Chr5:31856598-31856617	MsG0580026179.01.T01:CDS	30.0%
	AGTGAAATACCATTGCTACT+AGG	-	Chr5:31856932-31856951	None:intergenic	35.0%
	GATGATCCATCATTGAAGTT+AGG	-	Chr5:31856711-31856730	None:intergenic	35.0%
	GTAGCAATGGTATTTCACTA+TGG	+	Chr5:31856933-31856952	MsG0580026179.01.T01:CDS	35.0%
	GTGAAATACCATTGCTACTA+GGG	-	Chr5:31856931-31856950	None:intergenic	35.0%
	TCACATGAATGGATGAAACA+TGG	+	Chr5:31856956-31856975	MsG0580026179.01.T01:CDS	35.0%
	TCTTGTAACCTGCATTCTTA+AGG	-	Chr5:31857066-31857085	None:intergenic	35.0%
	TTTCACTATGGTCACATGAA+TGG	+	Chr5:31856945-31856964	MsG0580026179.01.T01:CDS	35.0%
!	ATTTTACCATTGCTGGACTT+AGG	+	Chr5:31856685-31856704	MsG0580026179.01.T01:CDS	35.0%
!	CATTTTAGATGCCATACAAC+AGG	+	Chr5:31857335-31857354	MsG0580026179.01.T01:CDS	35.0%
	AACCTGCATTCTTAAGGATC+TGG	-	Chr5:31857060-31857079	None:intergenic	40.0%
	CTCAGACCTTATTAAGGACT+TGG	+	Chr5:31856880-31856899	MsG0580026179.01.T01:CDS	40.0%
	CTTAGGCCTAACTTCAATGA+TGG	+	Chr5:31856702-31856721	MsG0580026179.01.T01:CDS	40.0%
	GCAATGGTAAAATCTGCTGT+CGG	-	Chr5:31856678-31856697	None:intergenic	40.0%
	TCAAAATTCATTGAGTGCCC+TGG	+	Chr5:31857450-31857469	MsG0580026179.01.T01:CDS	40.0%
!	ACAGCAGATTTTACCATTGC+TGG	+	Chr5:31856678-31856697	MsG0580026179.01.T01:CDS	40.0%
!	GGCATCTAAAATGTTACCTG+TGG	-	Chr5:31857328-31857347	None:intergenic	40.0%
!!!	AAAATCTGCTGTCGGTTTTC+CGG	-	Chr5:31856670-31856689	None:intergenic	40.0%
	ACATGTGTGCGGACATTTCT+GGG	+	Chr5:31857427-31857446	MsG0580026179.01.T01:CDS	45.0%
	ATACCCTGTAGCCTGTTGTA+TGG	-	Chr5:31857349-31857368	None:intergenic	45.0%
	ATGCCATACAACAGGCTACA+GGG	+	Chr5:31857343-31857362	MsG0580026179.01.T01:CDS	45.0%
	ATGTACAGCTCTCAACGCTT+TGG	-	Chr5:31857239-31857258	None:intergenic	45.0%
	CTCCAGATCCTTAAGAATGC+AGG	+	Chr5:31857055-31857074	MsG0580026179.01.T01:CDS	45.0%
	TACATGTGTGCGGACATTTC+TGG	+	Chr5:31857426-31857445	MsG0580026179.01.T01:CDS	45.0%
	TGTGTCAGACGAGACAAGTA+TGG	-	Chr5:31857208-31857227	None:intergenic	45.0%
	TTTGAGTCACAGATTGCTCC+TGG	-	Chr5:31856624-31856643	None:intergenic	45.0%
!	TTTTCGCAAAACAGCAGCTC+TGG	-	Chr5:31856647-31856666	None:intergenic	45.0%
!!!	AGCTGCTGTTTTGCGAAAAC+CGG	+	Chr5:31856648-31856667	MsG0580026179.01.T01:CDS	45.0%
	AGCTACCCATTGGAAGACCA+GGG	-	Chr5:31857470-31857489	None:intergenic	50.0%
	CTACTAGGGCAGCTCAAAGA+TGG	-	Chr5:31856917-31856936	None:intergenic	50.0%
	GATGCCATACAACAGGCTAC+AGG	+	Chr5:31857342-31857361	MsG0580026179.01.T01:CDS	50.0%
	GTTAGGCCTAAGTCCAGCAA+TGG	-	Chr5:31856694-31856713	None:intergenic	50.0%
	TTGAGCTGCCCTAGTAGCAA+TGG	+	Chr5:31856920-31856939	MsG0580026179.01.T01:CDS	50.0%
	TTGCTAATGATGCAGTGGCC+AGG	+	Chr5:31856603-31856622	MsG0580026179.01.T01:CDS	50.0%
	CAGCTACCCATTGGAAGACC+AGG	-	Chr5:31857471-31857490	None:intergenic	55.0%
	GGTCTTCCAATGGGTAGCTG+TGG	+	Chr5:31857471-31857490	MsG0580026179.01.T01:CDS	55.0%
	GGTGTCTGACTGACACATCG+TGG	-	Chr5:31857187-31857206	None:intergenic	55.0%
	TTAGCGCCACAGCTACCCAT+TGG	-	Chr5:31857480-31857499	None:intergenic	55.0%
!	GAGTGCCCTGGTCTTCCAAT+GGG	+	Chr5:31857462-31857481	MsG0580026179.01.T01:CDS	55.0%
!	TGAGTGCCCTGGTCTTCCAA+TGG	+	Chr5:31857461-31857480	MsG0580026179.01.T01:CDS	55.0%
!	CAGGCTACAGGGTATTCCCC+AGG	+	Chr5:31857354-31857373	MsG0580026179.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	31856312	31857669	31856312	ID=MsG0580026179.01;Name=MsG0580026179.01
Chr5	mRNA	31856312	31857669	31856312	ID=MsG0580026179.01.T01;Parent=MsG0580026179.01;Name=MsG0580026179.01.T01;_AED=0.48;_eAED=0.48;_QI=45\|0.66\|0.75\|1\|1\|1\|4\|148\|238
Chr5	exon	31856312	31856464	31856312	ID=MsG0580026179.01.T01:exon:24956;Parent=MsG0580026179.01.T01
Chr5	exon	31856588	31856773	31856588	ID=MsG0580026179.01.T01:exon:24957;Parent=MsG0580026179.01.T01
Chr5	exon	31856878	31857076	31856878	ID=MsG0580026179.01.T01:exon:24958;Parent=MsG0580026179.01.T01
Chr5	exon	31857298	31857669	31857298	ID=MsG0580026179.01.T01:exon:24959;Parent=MsG0580026179.01.T01
Chr5	five_prime_UTR	31856312	31856356	31856312	ID=MsG0580026179.01.T01:five_prime_utr;Parent=MsG0580026179.01.T01
Chr5	CDS	31856357	31856464	31856357	ID=MsG0580026179.01.T01:cds;Parent=MsG0580026179.01.T01
Chr5	CDS	31856588	31856773	31856588	ID=MsG0580026179.01.T01:cds;Parent=MsG0580026179.01.T01
Chr5	CDS	31856878	31857076	31856878	ID=MsG0580026179.01.T01:cds;Parent=MsG0580026179.01.T01
Chr5	CDS	31857298	31857521	31857298	ID=MsG0580026179.01.T01:cds;Parent=MsG0580026179.01.T01
Chr5	three_prime_UTR	31857522	31857669	31857522	ID=MsG0580026179.01.T01:three_prime_utr;Parent=MsG0580026179.01.T01

Gene Sequence

>MsG0580026179.01.T01

ATGAAACTCAACACCATTTCATTTTTGTCCAAGCTTTTGATACTTCAATATCTTTCTGTTCAAAGCCTTTCTGCTCAAGAATTTGATTTCTTCTATTTTATTCTGCAGTATTGCACTGTTAATTTGCTAATGATGCAGTGGCCAGGAGCAATCTGTGACTCAAACCAGAGCTGCTGTTTTGCGAAAACCGGAAAACCGACAGCAGATTTTACCATTGCTGGACTTAGGCCTAACTTCAATGATGGATCATCTCCCTCAAACTGTAATATTAAAAGTGTCTTTGATAAATCTAAGATCTCAGACCTTATTAAGGACTTGGAAAATAATTGGCCATCTTTGAGCTGCCCTAGTAGCAATGGTATTTCACTATGGTCACATGAATGGATGAAACATGGTACATGTTCAGAATCTAAGCTTACTCAACATGACTACTTTCAAACAGCTCTCAAACTCAAGAAAAAATCAAATCTTCTCCAGATCCTTAAGAATGCAGGGATTGAACCAGATAATAAATTTTACTCCACAGGTAACATTTTAGATGCCATACAACAGGCTACAGGGTATTCCCCAGGAATAGAATGTAATAGAGATTCAGCTCATAACAGCCAGCTTTATCAAGTTTACATGTGTGCGGACATTTCTGGGTCAAAATTCATTGAGTGCCCTGGTCTTCCAATGGGTAGCTGTGGCGCTAATGTACAATTCCCCAAGTTTTAA

Protein sequence

>MsG0580026179.01.T01

MKLNTISFLSKLLILQYLSVQSLSAQEFDFFYFILQYCTVNLLMMQWPGAICDSNQSCCFAKTGKPTADFTIAGLRPNFNDGSSPSNCNIKSVFDKSKISDLIKDLENNWPSLSCPSSNGISLWSHEWMKHGTCSESKLTQHDYFQTALKLKKKSNLLQILKNAGIEPDNKFYSTGNILDAIQQATGYSPGIECNRDSAHNSQLYQVYMCADISGSKFIECPGLPMGSCGANVQFPKF*