Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038994.01.T01 | XP_013449059.1 | 91.093 | 494 | 36 | 2 | 29 | 514 | 1 | 494 | 0 | 914 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038994.01.T01 | A0A072U0X6 | 91.093 | 494 | 36 | 2 | 29 | 514 | 1 | 494 | 0.0 | 914 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038994.01.T01 | MTR_7g066260 | 91.093 | 494 | 36 | 2 | 29 | 514 | 1 | 494 | 0.0 | 914 |
| MsG0780038994.01.T01 | MTR_7g066290 | 65.948 | 464 | 119 | 5 | 29 | 483 | 1 | 434 | 0.0 | 565 |
| MsG0780038994.01.T01 | MTR_7g066360 | 63.765 | 494 | 152 | 10 | 29 | 511 | 1 | 478 | 0.0 | 551 |
| MsG0780038994.01.T01 | MTR_7g066340 | 56.674 | 487 | 182 | 8 | 37 | 511 | 6 | 475 | 3.10e-174 | 499 |
| MsG0780038994.01.T01 | MTR_7g066570 | 56.859 | 503 | 171 | 12 | 29 | 496 | 1 | 492 | 6.24e-172 | 497 |
| MsG0780038994.01.T01 | MTR_7g066350 | 60.398 | 452 | 156 | 10 | 39 | 478 | 5 | 445 | 5.33e-167 | 481 |
| MsG0780038994.01.T01 | MTR_1g041315 | 56.455 | 457 | 171 | 8 | 31 | 466 | 2 | 451 | 1.19e-165 | 478 |
| MsG0780038994.01.T01 | MTR_7g012680 | 54.777 | 471 | 179 | 10 | 31 | 488 | 2 | 451 | 6.78e-159 | 460 |
| MsG0780038994.01.T01 | MTR_7g066400 | 53.030 | 462 | 159 | 11 | 39 | 478 | 8 | 433 | 7.95e-153 | 444 |
| MsG0780038994.01.T01 | MTR_7g058710 | 50.501 | 499 | 180 | 13 | 29 | 482 | 1 | 477 | 8.18e-148 | 432 |
| MsG0780038994.01.T01 | MTR_7g066310 | 51.163 | 473 | 159 | 8 | 40 | 511 | 4 | 405 | 3.18e-142 | 416 |
| MsG0780038994.01.T01 | MTR_7g066580 | 49.284 | 489 | 157 | 14 | 49 | 488 | 1 | 447 | 3.22e-135 | 399 |
| MsG0780038994.01.T01 | MTR_7g058700 | 48.780 | 451 | 148 | 9 | 55 | 482 | 531 | 921 | 7.11e-119 | 372 |
| MsG0780038994.01.T01 | MTR_7g066430 | 43.326 | 487 | 224 | 12 | 43 | 482 | 4 | 485 | 2.67e-115 | 350 |
| MsG0780038994.01.T01 | MTR_7g066430 | 25.703 | 249 | 161 | 8 | 33 | 263 | 247 | 489 | 2.06e-12 | 69.7 |
| MsG0780038994.01.T01 | MTR_1g014060 | 45.946 | 444 | 163 | 11 | 56 | 488 | 13 | 390 | 1.60e-111 | 337 |
| MsG0780038994.01.T01 | MTR_2g029400 | 45.094 | 479 | 145 | 13 | 34 | 472 | 5 | 405 | 2.96e-111 | 337 |
| MsG0780038994.01.T01 | MTR_7g066280 | 45.946 | 444 | 154 | 11 | 122 | 511 | 1 | 412 | 6.14e-110 | 333 |
| MsG0780038994.01.T01 | MTR_7g066280 | 25.283 | 265 | 138 | 10 | 39 | 263 | 146 | 390 | 7.05e-12 | 67.8 |
| MsG0780038994.01.T01 | MTR_7g066410 | 40.820 | 512 | 232 | 12 | 38 | 482 | 5 | 512 | 1.13e-109 | 336 |
| MsG0780038994.01.T01 | MTR_7g063660 | 40.084 | 479 | 234 | 11 | 42 | 482 | 8 | 471 | 7.23e-99 | 307 |
| MsG0780038994.01.T01 | MTR_7g066480 | 44.130 | 460 | 191 | 13 | 42 | 485 | 15 | 424 | 1.06e-98 | 305 |
| MsG0780038994.01.T01 | MTR_7g062300 | 41.079 | 482 | 236 | 10 | 34 | 480 | 3 | 471 | 5.36e-98 | 305 |
| MsG0780038994.01.T01 | MTR_7g063880 | 41.237 | 485 | 229 | 13 | 33 | 483 | 1 | 463 | 1.99e-97 | 303 |
| MsG0780038994.01.T01 | MTR_7g062280 | 39.673 | 489 | 235 | 12 | 42 | 482 | 9 | 485 | 1.03e-95 | 299 |
| MsG0780038994.01.T01 | MTR_7g063900 | 42.285 | 499 | 222 | 16 | 29 | 480 | 1 | 480 | 6.93e-93 | 292 |
| MsG0780038994.01.T01 | MTR_7g066490 | 43.400 | 447 | 197 | 16 | 43 | 485 | 16 | 410 | 8.61e-92 | 286 |
| MsG0780038994.01.T01 | MTR_7g063820 | 41.818 | 495 | 216 | 17 | 37 | 480 | 3 | 476 | 2.34e-91 | 288 |
| MsG0780038994.01.T01 | MTR_7g063890 | 42.653 | 490 | 215 | 14 | 42 | 482 | 26 | 498 | 4.34e-87 | 277 |
| MsG0780038994.01.T01 | MTR_7g063920 | 38.703 | 478 | 217 | 9 | 33 | 482 | 1 | 430 | 1.02e-86 | 274 |
| MsG0780038994.01.T01 | MTR_7g063830 | 38.854 | 471 | 223 | 15 | 39 | 482 | 6 | 438 | 2.32e-85 | 271 |
| MsG0780038994.01.T01 | MTR_3g007740 | 39.579 | 475 | 213 | 16 | 42 | 482 | 8 | 442 | 1.50e-84 | 269 |
| MsG0780038994.01.T01 | MTR_7g063840 | 38.526 | 475 | 234 | 14 | 44 | 480 | 11 | 465 | 2.64e-83 | 266 |
| MsG0780038994.01.T01 | MTR_3g065200 | 38.512 | 457 | 200 | 14 | 43 | 469 | 3 | 408 | 1.03e-81 | 262 |
| MsG0780038994.01.T01 | MTR_4g019310 | 37.626 | 497 | 237 | 17 | 40 | 478 | 5 | 486 | 8.63e-81 | 261 |
| MsG0780038994.01.T01 | MTR_7g063670 | 38.829 | 461 | 231 | 13 | 44 | 480 | 16 | 449 | 1.05e-75 | 246 |
| MsG0780038994.01.T01 | MTR_4g017830 | 34.156 | 527 | 265 | 17 | 34 | 494 | 3 | 513 | 5.05e-75 | 246 |
| MsG0780038994.01.T01 | MTR_4g019340 | 35.000 | 480 | 242 | 15 | 44 | 470 | 39 | 501 | 2.35e-71 | 236 |
| MsG0780038994.01.T01 | MTR_4g017610 | 33.130 | 492 | 258 | 16 | 36 | 478 | 6 | 475 | 1.12e-66 | 223 |
| MsG0780038994.01.T01 | MTR_4g017440 | 33.988 | 509 | 253 | 20 | 36 | 478 | 7 | 498 | 7.52e-66 | 222 |
| MsG0780038994.01.T01 | MTR_4g017410 | 33.401 | 491 | 267 | 16 | 37 | 479 | 3 | 481 | 2.88e-64 | 218 |
| MsG0780038994.01.T01 | MTR_7g066680 | 46.823 | 299 | 96 | 5 | 241 | 478 | 38 | 334 | 2.24e-62 | 208 |
| MsG0780038994.01.T01 | MTR_4g017550 | 33.403 | 479 | 226 | 19 | 70 | 480 | 18 | 471 | 3.61e-55 | 192 |
| MsG0780038994.01.T01 | MTR_4g017550 | 28.384 | 229 | 123 | 8 | 43 | 250 | 247 | 455 | 8.01e-12 | 67.8 |
| MsG0780038994.01.T01 | MTR_4g017470 | 30.899 | 534 | 240 | 18 | 39 | 501 | 8 | 483 | 1.37e-53 | 189 |
| MsG0780038994.01.T01 | MTR_2g067310 | 56.044 | 182 | 36 | 3 | 48 | 229 | 53 | 190 | 1.45e-53 | 181 |
| MsG0780038994.01.T01 | MTR_7g066390 | 60.000 | 170 | 33 | 3 | 330 | 499 | 1 | 135 | 4.83e-53 | 177 |
| MsG0780038994.01.T01 | MTR_7g063720 | 41.463 | 205 | 102 | 2 | 292 | 482 | 26 | 226 | 4.35e-42 | 150 |
| MsG0780038994.01.T01 | MTR_7g062270 | 46.552 | 174 | 85 | 4 | 44 | 215 | 11 | 178 | 3.23e-40 | 150 |
| MsG0780038994.01.T01 | MTR_8g023240 | 28.747 | 487 | 266 | 21 | 44 | 483 | 38 | 490 | 5.06e-34 | 135 |
| MsG0780038994.01.T01 | MTR_7g100420 | 36.050 | 319 | 165 | 8 | 193 | 482 | 89 | 397 | 3.50e-32 | 128 |
| MsG0780038994.01.T01 | MTR_7g100420 | 50.667 | 75 | 30 | 2 | 28 | 98 | 27 | 98 | 3.30e-12 | 68.6 |
| MsG0780038994.01.T01 | MTR_7g063850 | 35.616 | 219 | 108 | 6 | 292 | 482 | 69 | 282 | 3.65e-27 | 111 |
| MsG0780038994.01.T01 | MTR_1g115440 | 31.250 | 256 | 135 | 8 | 33 | 263 | 1 | 240 | 3.66e-25 | 104 |
| MsG0780038994.01.T01 | MTR_1g115440 | 26.068 | 234 | 136 | 4 | 279 | 476 | 1 | 233 | 3.17e-16 | 78.6 |
| MsG0780038994.01.T01 | MTR_8g445860 | 30.508 | 236 | 126 | 8 | 273 | 475 | 1 | 231 | 1.12e-22 | 97.4 |
| MsG0780038994.01.T01 | MTR_8g445860 | 29.508 | 244 | 130 | 9 | 43 | 262 | 13 | 238 | 1.16e-21 | 94.4 |
| MsG0780038994.01.T01 | MTR_0150s0010 | 30.932 | 236 | 144 | 5 | 42 | 263 | 9 | 239 | 1.36e-22 | 97.1 |
| MsG0780038994.01.T01 | MTR_0150s0010 | 27.928 | 222 | 119 | 6 | 292 | 475 | 13 | 231 | 2.77e-18 | 84.7 |
| MsG0780038994.01.T01 | MTR_4g019240 | 40.870 | 115 | 54 | 5 | 39 | 143 | 9 | 119 | 1.02e-17 | 81.6 |
| MsG0780038994.01.T01 | MTR_7g063690 | 34.104 | 173 | 92 | 7 | 152 | 316 | 64 | 222 | 2.81e-16 | 79.0 |
| MsG0780038994.01.T01 | MTR_7g063690 | 66.667 | 48 | 16 | 0 | 44 | 91 | 13 | 60 | 6.27e-12 | 66.2 |
| MsG0780038994.01.T01 | MTR_1g115450 | 40.000 | 85 | 46 | 1 | 43 | 127 | 7 | 86 | 1.33e-14 | 71.2 |
| MsG0780038994.01.T01 | MTR_7g063760 | 49.206 | 63 | 31 | 1 | 419 | 480 | 3 | 65 | 9.07e-14 | 67.0 |
| MsG0780038994.01.T01 | MTR_8g445910 | 40.000 | 95 | 48 | 3 | 43 | 133 | 8 | 97 | 4.25e-13 | 70.1 |
| MsG0780038994.01.T01 | MTR_8g044880 | 42.353 | 85 | 43 | 2 | 43 | 126 | 8 | 87 | 6.90e-13 | 69.7 |
| MsG0780038994.01.T01 | MTR_1g115455 | 41.176 | 85 | 45 | 1 | 43 | 127 | 9 | 88 | 8.61e-13 | 68.6 |
| MsG0780038994.01.T01 | MTR_0150s0030 | 37.895 | 95 | 50 | 3 | 43 | 133 | 8 | 97 | 1.85e-12 | 67.0 |
| MsG0780038994.01.T01 | MTR_1g115470 | 41.053 | 95 | 49 | 2 | 45 | 137 | 8 | 97 | 2.23e-12 | 69.3 |
| MsG0780038994.01.T01 | MTR_8g445920 | 40.000 | 80 | 43 | 1 | 42 | 121 | 9 | 83 | 1.06e-11 | 62.0 |
| MsG0780038994.01.T01 | MTR_8g044890 | 40.000 | 80 | 43 | 1 | 42 | 121 | 9 | 83 | 1.06e-11 | 62.0 |
| MsG0780038994.01.T01 | MTR_7g063870 | 45.833 | 72 | 34 | 1 | 37 | 103 | 25 | 96 | 4.87e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038994.01.T01 | AT5G43240 | 30.962 | 520 | 289 | 15 | 44 | 511 | 10 | 511 | 9.67e-55 | 192 |
| MsG0780038994.01.T01 | AT5G43240 | 30.962 | 520 | 289 | 15 | 44 | 511 | 10 | 511 | 9.67e-55 | 192 |
| MsG0780038994.01.T01 | AT5G43240 | 30.962 | 520 | 289 | 15 | 44 | 511 | 10 | 511 | 9.67e-55 | 192 |
| MsG0780038994.01.T01 | AT5G01120 | 30.143 | 491 | 288 | 14 | 44 | 486 | 10 | 493 | 5.98e-54 | 190 |
| MsG0780038994.01.T01 | AT5G01130 | 31.087 | 460 | 273 | 11 | 43 | 482 | 9 | 444 | 5.91e-53 | 186 |
| MsG0780038994.01.T01 | AT5G01150 | 30.675 | 489 | 270 | 15 | 45 | 483 | 11 | 480 | 2.61e-50 | 180 |
| MsG0780038994.01.T01 | AT3G09140 | 29.941 | 511 | 269 | 16 | 40 | 483 | 6 | 494 | 3.36e-50 | 180 |
| MsG0780038994.01.T01 | AT3G09140 | 28.386 | 539 | 269 | 16 | 40 | 483 | 6 | 522 | 3.53e-46 | 169 |
| MsG0780038994.01.T01 | AT5G01140 | 28.689 | 488 | 271 | 14 | 45 | 492 | 11 | 461 | 4.50e-46 | 168 |
| MsG0780038994.01.T01 | AT3G09110 | 32.710 | 321 | 196 | 8 | 45 | 354 | 11 | 322 | 5.06e-46 | 164 |
| MsG0780038994.01.T01 | AT3G09120 | 32.609 | 322 | 186 | 11 | 38 | 340 | 1 | 310 | 2.02e-41 | 151 |
| MsG0780038994.01.T01 | AT5G37320 | 29.352 | 494 | 277 | 19 | 38 | 478 | 1 | 475 | 1.52e-37 | 144 |
| MsG0780038994.01.T01 | AT5G43240 | 28.065 | 367 | 207 | 11 | 190 | 511 | 13 | 367 | 6.64e-20 | 92.0 |
Find 102 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTGAAGCAGTGAAATT+TGG | 0.160011 | 7:-56532961 | MsG0780038994.01.T01:CDS |
| GATCCTAAATCCTCTCTTTC+TGG | 0.176316 | 7:-56531914 | MsG0780038994.01.T01:CDS |
| CTTACCATCTGATTCTAATA+AGG | 0.204419 | 7:-56532284 | MsG0780038994.01.T01:CDS |
| CTTCTTCCTTTGGCTTCTTC+AGG | 0.227923 | 7:+56531147 | None:intergenic |
| TCCGCAGCTCCTCTCTTTCT+TGG | 0.228573 | 7:+56534080 | None:intergenic |
| GTTGAGTAGCATTTCTTTAC+AGG | 0.237436 | 7:+56532876 | None:intergenic |
| TGTTGGGAATGGCTTTATTA+AGG | 0.238339 | 7:-56532653 | MsG0780038994.01.T01:CDS |
| CTGACCCAACGTTACAGTTT+AGG | 0.265072 | 7:-56532318 | MsG0780038994.01.T01:CDS |
| GATTTCTATAAGTGGTTATA+CGG | 0.266948 | 7:+56532737 | None:intergenic |
| AAAGAGAGGAGCTGCGGATT+TGG | 0.274864 | 7:-56534075 | MsG0780038994.01.T01:CDS |
| AGCTCCTCTCTTTCTTGGAT+TGG | 0.277330 | 7:+56534085 | None:intergenic |
| TAGCATTTCTTTACAGGTAT+TGG | 0.277585 | 7:+56532882 | None:intergenic |
| CAAAGGACCATTAACAATTA+TGG | 0.282360 | 7:-56531882 | MsG0780038994.01.T01:CDS |
| TACGCCTCCATTGAGTTTCT+AGG | 0.284614 | 7:+56532853 | None:intergenic |
| CGAAGTCACCTTGAGAGTTT+TGG | 0.304893 | 7:-56533103 | MsG0780038994.01.T01:CDS |
| AAGTTCCAATTGGTAGTATC+TGG | 0.332361 | 7:+56531984 | None:intergenic |
| CTGGTTCTTGAGTCCAAAAT+TGG | 0.338872 | 7:+56532003 | None:intergenic |
| GCTCCTCTCTTTCTTGGATT+GGG | 0.340232 | 7:+56534086 | None:intergenic |
| TCTTGTAGGGGATATATTAA+TGG | 0.342173 | 7:-56532763 | MsG0780038994.01.T01:CDS |
| AATATCTATCAAAGCAGTTT+TGG | 0.346758 | 7:+56531181 | None:intergenic |
| CCTCCAGAAAGAGAGGATTT+AGG | 0.352149 | 7:+56531911 | None:intergenic |
| GCAAGGACTGGCAGTCTTGT+AGG | 0.369793 | 7:-56532777 | MsG0780038994.01.T01:CDS |
| AAACTTGTTCCAAGATCATT+AGG | 0.370772 | 7:+56532589 | None:intergenic |
| TTAGCCCAAACTTCTTCCTT+TGG | 0.373898 | 7:+56531137 | None:intergenic |
| AGAAGCCAAAGGAAGAAGTT+TGG | 0.375285 | 7:-56531142 | MsG0780038994.01.T01:CDS |
| ATATTGAAGCAGTGAAATTT+GGG | 0.376057 | 7:-56532960 | MsG0780038994.01.T01:CDS |
| TGAATGCAGAGAGATGTTTA+AGG | 0.380741 | 7:-56532069 | MsG0780038994.01.T01:CDS |
| ATTCTATGATTTCTATCCTA+TGG | 0.386617 | 7:-56533163 | MsG0780038994.01.T01:CDS |
| TTACCATCTGATTCTAATAA+GGG | 0.396508 | 7:-56532283 | MsG0780038994.01.T01:CDS |
| TGTGTGATGCCTAATGATCT+TGG | 0.396811 | 7:-56532598 | MsG0780038994.01.T01:CDS |
| AGCTTCTTAACCTTACCATT+AGG | 0.407652 | 7:-56533015 | MsG0780038994.01.T01:CDS |
| GAAGCCAAAGGAAGAAGTTT+GGG | 0.408612 | 7:-56531141 | MsG0780038994.01.T01:CDS |
| ATCTTGATGAACACTATCTA+TGG | 0.410521 | 7:-56532906 | MsG0780038994.01.T01:CDS |
| ATTTCCTCCACGTCATTAAG+AGG | 0.412745 | 7:+56531788 | None:intergenic |
| TCTGTCACCATAATTGTTAA+TGG | 0.423257 | 7:+56531875 | None:intergenic |
| CTTGTAGGGGATATATTAAT+GGG | 0.428714 | 7:-56532762 | MsG0780038994.01.T01:CDS |
| GATTTCTATCCTATGGCATC+TGG | 0.438641 | 7:-56533156 | MsG0780038994.01.T01:CDS |
| CAAGGACTGGCAGTCTTGTA+GGG | 0.455929 | 7:-56532776 | MsG0780038994.01.T01:CDS |
| CCAACGTTACAGTTTAGGAT+TGG | 0.456467 | 7:-56532313 | MsG0780038994.01.T01:CDS |
| CAATCCTAAACTGTAACGTT+GGG | 0.456539 | 7:+56532314 | None:intergenic |
| TTAATAAAGCCATTCCCAAC+AGG | 0.457135 | 7:+56532655 | None:intergenic |
| AAAGTTGTATATGCTGAAGC+AGG | 0.470963 | 7:-56533063 | MsG0780038994.01.T01:CDS |
| TAGATATGAAACAGCGTCAA+TGG | 0.470976 | 7:+56531826 | None:intergenic |
| AGTCTAGAAATAGTTCCTAA+TGG | 0.475346 | 7:+56533000 | None:intergenic |
| GCATTTCTGATTTCTATAAG+TGG | 0.478212 | 7:+56532729 | None:intergenic |
| AAAACGGATTTGACTCCTGT+TGG | 0.478327 | 7:-56532670 | MsG0780038994.01.T01:CDS |
| CCAATCCTAAACTGTAACGT+TGG | 0.486182 | 7:+56532313 | None:intergenic |
| ACGCCTCCATTGAGTTTCTA+GGG | 0.488729 | 7:+56532854 | None:intergenic |
| GATTTGACTCCTGTTGGGAA+TGG | 0.494885 | 7:-56532664 | MsG0780038994.01.T01:CDS |
| AAGAACCAGATACTACCAAT+TGG | 0.496758 | 7:-56531989 | MsG0780038994.01.T01:CDS |
| CAAAGCTACTGCCGTCAAAA+CGG | 0.498581 | 7:-56532686 | MsG0780038994.01.T01:CDS |
| AAACGGATTTGACTCCTGTT+GGG | 0.499817 | 7:-56532669 | MsG0780038994.01.T01:CDS |
| GGAGTGTTGCAAATGCTAGA+AGG | 0.519900 | 7:-56532142 | MsG0780038994.01.T01:CDS |
| TTTCGTTAGTATTGGTGTAG+AGG | 0.525427 | 7:-56531765 | MsG0780038994.01.T01:CDS |
| GTTGACGCACAAGTTCCAAT+TGG | 0.529412 | 7:+56531974 | None:intergenic |
| CATTTGCAACACTCCTCCCA+TGG | 0.530725 | 7:+56532150 | None:intergenic |
| TCAACATCCGCTTTGACAAA+CGG | 0.540818 | 7:-56531616 | MsG0780038994.01.T01:CDS |
| AGAAATAGTTCCTAATGGTA+AGG | 0.545251 | 7:+56533005 | None:intergenic |
| TTACAGTTTAGGATTGGAAA+CGG | 0.547429 | 7:-56532307 | MsG0780038994.01.T01:CDS |
| ACTCAACCCTAGAAACTCAA+TGG | 0.548659 | 7:-56532860 | MsG0780038994.01.T01:CDS |
| CGTTAGTATTGGTGTAGAGG+AGG | 0.549157 | 7:-56531762 | MsG0780038994.01.T01:intron |
| TCCTCTGACAGACTTTATCA+AGG | 0.550982 | 7:-56532359 | MsG0780038994.01.T01:CDS |
| AGAGAGATGTTTAAGGTCAC+AGG | 0.559907 | 7:-56532062 | MsG0780038994.01.T01:CDS |
| ATACCCTTATTAGAATCAGA+TGG | 0.560811 | 7:+56532280 | None:intergenic |
| TTTCTAACATTTCCCATGGG+AGG | 0.563322 | 7:-56532163 | MsG0780038994.01.T01:CDS |
| ATCAGAAATGCATCTGTGGA+AGG | 0.565067 | 7:-56532717 | MsG0780038994.01.T01:CDS |
| CACTTTGATACAGTGTACTC+AGG | 0.565558 | 7:+56532935 | None:intergenic |
| TTAGGATCAACAAGTTTCGC+GGG | 0.571667 | 7:+56531929 | None:intergenic |
| GACATATCCTCCAGAAAGAG+AGG | 0.573373 | 7:+56531904 | None:intergenic |
| TGTATATGCTGAAGCAGGGA+AGG | 0.577810 | 7:-56533058 | MsG0780038994.01.T01:CDS |
| TTCATATCTAGAAAGAATGA+AGG | 0.578901 | 7:-56531813 | MsG0780038994.01.T01:CDS |
| TTTAGGATCAACAAGTTTCG+CGG | 0.579897 | 7:+56531928 | None:intergenic |
| TATTTCTAGACTTGTAGCTA+AGG | 0.580006 | 7:-56532989 | MsG0780038994.01.T01:CDS |
| CTTTCTGGAGGATATGTCAA+AGG | 0.584702 | 7:-56531899 | MsG0780038994.01.T01:CDS |
| GGCTTCTTCAGGTTGTACAA+TGG | 0.592081 | 7:+56531158 | None:intergenic |
| TCCTTGATAAAGTCTGTCAG+AGG | 0.594500 | 7:+56532358 | None:intergenic |
| GTTGCAATGCCAGATGCCAT+AGG | 0.603282 | 7:+56533147 | None:intergenic |
| GATTCAAAGAACACTTACAA+AGG | 0.610618 | 7:-56534053 | MsG0780038994.01.T01:intron |
| CTTGAGGCCGTTTGTCAAAG+CGG | 0.611309 | 7:+56531609 | None:intergenic |
| ACAGCGTCAATGGATGACAT+TGG | 0.611356 | 7:+56531836 | None:intergenic |
| GTTGTCGACCAAAACTCTCA+AGG | 0.613169 | 7:+56533095 | None:intergenic |
| TTTCCTCCACGTCATTAAGA+GGG | 0.615237 | 7:+56531789 | None:intergenic |
| TTACATTTGCTTCAGACACA+CGG | 0.616719 | 7:-56532568 | MsG0780038994.01.T01:CDS |
| AATTATGGTGACAGATGACT+TGG | 0.616777 | 7:-56531867 | MsG0780038994.01.T01:CDS |
| ATTTGCAACACTCCTCCCAT+GGG | 0.620362 | 7:+56532151 | None:intergenic |
| GTTTGTCAAAGCGGATGTTG+AGG | 0.622650 | 7:+56531618 | None:intergenic |
| AGAAATCAGAAATGCATCTG+TGG | 0.624051 | 7:-56532721 | MsG0780038994.01.T01:CDS |
| TCAACTTGCACGTTTGATAG+CGG | 0.627462 | 7:-56531956 | MsG0780038994.01.T01:CDS |
| TTGCACGTAAAATACTGCGC+AGG | 0.631734 | 7:+56532796 | None:intergenic |
| TCCAAGAAAGAGAGGAGCTG+CGG | 0.632635 | 7:-56534081 | MsG0780038994.01.T01:CDS |
| AAGTTGTATATGCTGAAGCA+GGG | 0.633791 | 7:-56533062 | MsG0780038994.01.T01:CDS |
| AACGGCCTCAAGCAGTACAT+AGG | 0.634113 | 7:-56531598 | MsG0780038994.01.T01:intron |
| CCTAAATCCTCTCTTTCTGG+AGG | 0.635757 | 7:-56531911 | MsG0780038994.01.T01:CDS |
| TGACCCAATCCAAGAAAGAG+AGG | 0.647839 | 7:-56534089 | MsG0780038994.01.T01:CDS |
| GTACAACCTGAAGAAGCCAA+AGG | 0.662118 | 7:-56531153 | MsG0780038994.01.T01:CDS |
| AAGGACTGGCAGTCTTGTAG+GGG | 0.662149 | 7:-56532775 | MsG0780038994.01.T01:CDS |
| GAAGGTCCCTCTTAATGACG+TGG | 0.665769 | 7:-56531795 | MsG0780038994.01.T01:CDS |
| ACTAACCTATGTACTGCTTG+AGG | 0.678228 | 7:+56531593 | None:intergenic |
| GCAACTGAATCACTTGAACA+AGG | 0.688328 | 7:-56533129 | MsG0780038994.01.T01:CDS |
| GGTCCCTCTTAATGACGTGG+AGG | 0.689620 | 7:-56531792 | MsG0780038994.01.T01:CDS |
| CAACCCTAGAAACTCAATGG+AGG | 0.697460 | 7:-56532857 | MsG0780038994.01.T01:CDS |
| ACACGGTCTAAATGACATAG+CGG | 0.746573 | 7:-56532551 | MsG0780038994.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATATTACTAAAAAAAAAT+TGG | - | Chr7:56531823-56531842 | MsG0780038994.01.T01:CDS | 10.0% |
| !!! | TCAAGTTAATAATTTTTAAT+TGG | - | Chr7:56533938-56533957 | MsG0780038994.01.T01:intron | 10.0% |
| !!! | TTTTACACAATTTTATTTTT+TGG | + | Chr7:56531957-56531976 | None:intergenic | 10.0% |
| !! | ATTATTTGTTTATGAACAAT+AGG | - | Chr7:56531571-56531590 | MsG0780038994.01.T01:intron | 15.0% |
| !!! | AACTTTATTAACTTGTAAAA+TGG | + | Chr7:56532001-56532020 | None:intergenic | 15.0% |
| !!! | AATTTTATTTTTTGGTCAAA+TGG | + | Chr7:56531949-56531968 | None:intergenic | 15.0% |
| !! | AAAAGAAACATTCAAATCAT+TGG | - | Chr7:56533680-56533699 | MsG0780038994.01.T01:intron | 20.0% |
| !! | AATGAAATAGATCATAAATG+TGG | - | Chr7:56531781-56531800 | MsG0780038994.01.T01:CDS | 20.0% |
| !! | ACAATATTTGATTGCATATA+TGG | - | Chr7:56533536-56533555 | MsG0780038994.01.T01:intron | 20.0% |
| !! | TATTAAGTATTTATTTGTGC+AGG | - | Chr7:56532792-56532811 | MsG0780038994.01.T01:CDS | 20.0% |
| !! | TTTATCAAGGAAAAAATTCT+TGG | - | Chr7:56532865-56532884 | MsG0780038994.01.T01:CDS | 20.0% |
| !!! | AAACTGCTACTTTTATAATT+CGG | - | Chr7:56532581-56532600 | MsG0780038994.01.T01:CDS | 20.0% |
| !!! | ACATTTTACTTGTCTTATTT+GGG | - | Chr7:56531649-56531668 | MsG0780038994.01.T01:CDS | 20.0% |
| !!! | TACATTTTACTTGTCTTATT+TGG | - | Chr7:56531648-56531667 | MsG0780038994.01.T01:CDS | 20.0% |
| ! | AAATTAAATGAGTGAAGCAA+AGG | + | Chr7:56531274-56531293 | None:intergenic | 25.0% |
| ! | AACTAAATATTGTTTCAACC+AGG | - | Chr7:56533861-56533880 | MsG0780038994.01.T01:intron | 25.0% |
| ! | AATAGCAATTGGTCATAAAA+AGG | + | Chr7:56531895-56531914 | None:intergenic | 25.0% |
| ! | AGAAATAATAAGTACTACGA+CGG | + | Chr7:56533775-56533794 | None:intergenic | 25.0% |
| ! | AGGTTTAGCTATTATTATGA+TGG | + | Chr7:56531875-56531894 | None:intergenic | 25.0% |
| ! | ATATTGAAGCAGTGAAATTT+GGG | - | Chr7:56532251-56532270 | MsG0780038994.01.T01:CDS | 25.0% |
| ! | ATTCTATGATTTCTATCCTA+TGG | - | Chr7:56532048-56532067 | MsG0780038994.01.T01:CDS | 25.0% |
| ! | CAAAATGATTACTCATTAAG+AGG | - | Chr7:56531522-56531541 | MsG0780038994.01.T01:intron | 25.0% |
| ! | GACATTTCATAATATATGCA+GGG | + | Chr7:56531476-56531495 | None:intergenic | 25.0% |
| ! | GAGATCAATCAATTTAAATG+TGG | - | Chr7:56531418-56531437 | MsG0780038994.01.T01:intron | 25.0% |
| ! | GATTTCTATAAGTGGTTATA+CGG | + | Chr7:56532477-56532496 | None:intergenic | 25.0% |
| ! | TGGTTGAAACAATATTTAGT+TGG | + | Chr7:56533862-56533881 | None:intergenic | 25.0% |
| ! | TTACCATCTGATTCTAATAA+GGG | - | Chr7:56532928-56532947 | MsG0780038994.01.T01:CDS | 25.0% |
| ! | TTCATATCTAGAAAGAATGA+AGG | - | Chr7:56533398-56533417 | MsG0780038994.01.T01:intron | 25.0% |
| !! | AATATCTATCAAAGCAGTTT+TGG | + | Chr7:56534033-56534052 | None:intergenic | 25.0% |
| !! | TGAGCTTTAATAATTAGTTG+AGG | - | Chr7:56531702-56531721 | MsG0780038994.01.T01:intron | 25.0% |
| !! | TGCTTCACTCATTTAATTTA+AGG | - | Chr7:56531275-56531294 | MsG0780038994.01.T01:intron | 25.0% |
| !!! | AACTGCTACTTTTATAATTC+GGG | - | Chr7:56532582-56532601 | MsG0780038994.01.T01:CDS | 25.0% |
| !!! | CATTTTACTTGTCTTATTTG+GGG | - | Chr7:56531650-56531669 | MsG0780038994.01.T01:intron | 25.0% |
| !!! | TAGTAGATCGAGTATTTTTT+GGG | + | Chr7:56531630-56531649 | None:intergenic | 25.0% |
| AACACTAGTTATCAACAAGA+AGG | - | Chr7:56532696-56532715 | MsG0780038994.01.T01:CDS | 30.0% | |
| AGAAATAGTTCCTAATGGTA+AGG | + | Chr7:56532209-56532228 | None:intergenic | 30.0% | |
| AGTCTAGAAATAGTTCCTAA+TGG | + | Chr7:56532214-56532233 | None:intergenic | 30.0% | |
| ATACCCTTATTAGAATCAGA+TGG | + | Chr7:56532934-56532953 | None:intergenic | 30.0% | |
| ATCTTGATGAACACTATCTA+TGG | - | Chr7:56532305-56532324 | MsG0780038994.01.T01:CDS | 30.0% | |
| CAAAGGACCATTAACAATTA+TGG | - | Chr7:56533329-56533348 | MsG0780038994.01.T01:intron | 30.0% | |
| CATTAAGAGGTCAATCATTT+CGG | - | Chr7:56531535-56531554 | MsG0780038994.01.T01:intron | 30.0% | |
| CTCTAGCTATTAGACTATTT+AGG | + | Chr7:56531401-56531420 | None:intergenic | 30.0% | |
| CTTACCATCTGATTCTAATA+AGG | - | Chr7:56532927-56532946 | MsG0780038994.01.T01:CDS | 30.0% | |
| CTTGTAGGGGATATATTAAT+GGG | - | Chr7:56532449-56532468 | MsG0780038994.01.T01:intron | 30.0% | |
| GATATTGAAGCAGTGAAATT+TGG | - | Chr7:56532250-56532269 | MsG0780038994.01.T01:CDS | 30.0% | |
| GATTCAAAGAACACTTACAA+AGG | - | Chr7:56531158-56531177 | MsG0780038994.01.T01:CDS | 30.0% | |
| GCATTTCTGATTTCTATAAG+TGG | + | Chr7:56532485-56532504 | None:intergenic | 30.0% | |
| GGACATTTCATAATATATGC+AGG | + | Chr7:56531477-56531496 | None:intergenic | 30.0% | |
| TAACCTGAGATAAGCAAATT+AGG | + | Chr7:56532029-56532048 | None:intergenic | 30.0% | |
| TAGCATTTCTTTACAGGTAT+TGG | + | Chr7:56532332-56532351 | None:intergenic | 30.0% | |
| TAGTCTAGTTGTAAAAAGAC+AGG | + | Chr7:56531248-56531267 | None:intergenic | 30.0% | |
| TCAAACGTTGAAATAGCAAT+TGG | + | Chr7:56531906-56531925 | None:intergenic | 30.0% | |
| TCAATTTAAATGTGGAGTAG+TGG | - | Chr7:56531426-56531445 | MsG0780038994.01.T01:intron | 30.0% | |
| TCTGTCACCATAATTGTTAA+TGG | + | Chr7:56533339-56533358 | None:intergenic | 30.0% | |
| TCTTGTAGGGGATATATTAA+TGG | - | Chr7:56532448-56532467 | MsG0780038994.01.T01:intron | 30.0% | |
| TCTTTATATCTGCATGTACA+TGG | - | Chr7:56533974-56533993 | MsG0780038994.01.T01:intron | 30.0% | |
| ! | AAACTTGTTCCAAGATCATT+AGG | + | Chr7:56532625-56532644 | None:intergenic | 30.0% |
| ! | AGTTTTCTAACATTTCCCAT+GGG | - | Chr7:56533045-56533064 | MsG0780038994.01.T01:CDS | 30.0% |
| ! | ATATTTCTACGTAGGATGAT+AGG | - | Chr7:56531356-56531375 | MsG0780038994.01.T01:intron | 30.0% |
| ! | GAGGAAATTTTCGTTAGTAT+TGG | - | Chr7:56533438-56533457 | MsG0780038994.01.T01:intron | 30.0% |
| ! | TAGTTTTCTAACATTTCCCA+TGG | - | Chr7:56533044-56533063 | MsG0780038994.01.T01:CDS | 30.0% |
| ! | TTACAGTTTAGGATTGGAAA+CGG | - | Chr7:56532904-56532923 | MsG0780038994.01.T01:CDS | 30.0% |
| !! | ATTCCTAATTTGCTTATCTC+AGG | - | Chr7:56532023-56532042 | MsG0780038994.01.T01:CDS | 30.0% |
| !! | TATTTCTAGACTTGTAGCTA+AGG | - | Chr7:56532222-56532241 | MsG0780038994.01.T01:CDS | 30.0% |
| !!! | ATCGAGTATTTTTTGGGAAA+GGG | + | Chr7:56531624-56531643 | None:intergenic | 30.0% |
| !!! | GTAGTAGATCGAGTATTTTT+TGG | + | Chr7:56531631-56531650 | None:intergenic | 30.0% |
| AAAGTTGTATATGCTGAAGC+AGG | - | Chr7:56532148-56532167 | MsG0780038994.01.T01:CDS | 35.0% | |
| AAGAACCAGATACTACCAAT+TGG | - | Chr7:56533222-56533241 | MsG0780038994.01.T01:intron | 35.0% | |
| AAGTTGTATATGCTGAAGCA+GGG | - | Chr7:56532149-56532168 | MsG0780038994.01.T01:CDS | 35.0% | |
| AATTATGGTGACAGATGACT+TGG | - | Chr7:56533344-56533363 | MsG0780038994.01.T01:intron | 35.0% | |
| ACTAGTTATCAACAAGAAGG+AGG | - | Chr7:56532699-56532718 | MsG0780038994.01.T01:CDS | 35.0% | |
| AGAAATCAGAAATGCATCTG+TGG | - | Chr7:56532490-56532509 | MsG0780038994.01.T01:intron | 35.0% | |
| AGCTTCTTAACCTTACCATT+AGG | - | Chr7:56532196-56532215 | MsG0780038994.01.T01:CDS | 35.0% | |
| ATTTACCTTACCTTCCTCTA+AGG | - | Chr7:56531182-56531201 | MsG0780038994.01.T01:CDS | 35.0% | |
| CAATCCTAAACTGTAACGTT+GGG | + | Chr7:56532900-56532919 | None:intergenic | 35.0% | |
| CATAATATATGCAGGGTTTG+TGG | + | Chr7:56531469-56531488 | None:intergenic | 35.0% | |
| CCAAAATTGGCAAAAATACG+AGG | + | Chr7:56533198-56533217 | None:intergenic | 35.0% | |
| CTTACTTCTTGATCCAACTT+CGG | + | Chr7:56533833-56533852 | None:intergenic | 35.0% | |
| GTTGAGTAGCATTTCTTTAC+AGG | + | Chr7:56532338-56532357 | None:intergenic | 35.0% | |
| TAGATATGAAACAGCGTCAA+TGG | + | Chr7:56533388-56533407 | None:intergenic | 35.0% | |
| TATCAACTGAGTTAAGCTCA+CGG | - | Chr7:56531497-56531516 | MsG0780038994.01.T01:intron | 35.0% | |
| TGAATGCAGAGAGATGTTTA+AGG | - | Chr7:56533142-56533161 | MsG0780038994.01.T01:CDS | 35.0% | |
| TGATTGCATATATGGTTGCA+GGG | - | Chr7:56533544-56533563 | MsG0780038994.01.T01:intron | 35.0% | |
| TTAATAAAGCCATTCCCAAC+AGG | + | Chr7:56532559-56532578 | None:intergenic | 35.0% | |
| TTACATTTGCTTCAGACACA+CGG | - | Chr7:56532643-56532662 | MsG0780038994.01.T01:CDS | 35.0% | |
| TTGATTGCATATATGGTTGC+AGG | - | Chr7:56533543-56533562 | MsG0780038994.01.T01:intron | 35.0% | |
| TTTACCTTACCTTCCTCTAA+GGG | - | Chr7:56531183-56531202 | MsG0780038994.01.T01:CDS | 35.0% | |
| ! | AAGTTCCAATTGGTAGTATC+TGG | + | Chr7:56533230-56533249 | None:intergenic | 35.0% |
| ! | GTGCATCTATATTTCTACGT+AGG | - | Chr7:56531348-56531367 | MsG0780038994.01.T01:intron | 35.0% |
| ! | TTTAGGATCAACAAGTTTCG+CGG | + | Chr7:56533286-56533305 | None:intergenic | 35.0% |
| !! | CCTCGTATTTTTGCCAATTT+TGG | - | Chr7:56533195-56533214 | MsG0780038994.01.T01:intron | 35.0% |
| !! | TGTTGGGAATGGCTTTATTA+AGG | - | Chr7:56532558-56532577 | MsG0780038994.01.T01:CDS | 35.0% |
| !! | TTTCGTTAGTATTGGTGTAG+AGG | - | Chr7:56533446-56533465 | MsG0780038994.01.T01:intron | 35.0% |
| !! | TTTTTGGTCAAATGGTGTAG+TGG | + | Chr7:56531941-56531960 | None:intergenic | 35.0% |
| !!! | GATCGAGTATTTTTTGGGAA+AGG | + | Chr7:56531625-56531644 | None:intergenic | 35.0% |
| ACACGGTCTAAATGACATAG+CGG | - | Chr7:56532660-56532679 | MsG0780038994.01.T01:CDS | 40.0% | |
| ACTAACCTATGTACTGCTTG+AGG | + | Chr7:56533621-56533640 | None:intergenic | 40.0% | |
| ACTCAACCCTAGAAACTCAA+TGG | - | Chr7:56532351-56532370 | MsG0780038994.01.T01:CDS | 40.0% | |
| AGAAGCCAAAGGAAGAAGTT+TGG | - | Chr7:56534069-56534088 | MsG0780038994.01.T01:CDS | 40.0% | |
| ATCAACTGAGTTAAGCTCAC+GGG | - | Chr7:56531498-56531517 | MsG0780038994.01.T01:intron | 40.0% | |
| ATCAGAAATGCATCTGTGGA+AGG | - | Chr7:56532494-56532513 | MsG0780038994.01.T01:intron | 40.0% | |
| ATTGGTGTAGAGGAGGTAAA+TGG | - | Chr7:56533456-56533475 | MsG0780038994.01.T01:intron | 40.0% | |
| ATTTCCTCCACGTCATTAAG+AGG | + | Chr7:56533426-56533445 | None:intergenic | 40.0% | |
| ATTTGCCATCGAATGAAGCA+TGG | - | Chr7:56533909-56533928 | MsG0780038994.01.T01:intron | 40.0% | |
| CACTTTGATACAGTGTACTC+AGG | + | Chr7:56532279-56532298 | None:intergenic | 40.0% | |
| CCAATCCTAAACTGTAACGT+TGG | + | Chr7:56532901-56532920 | None:intergenic | 40.0% | |
| GAAGCCAAAGGAAGAAGTTT+GGG | - | Chr7:56534070-56534089 | MsG0780038994.01.T01:CDS | 40.0% | |
| GAGAACACGAATTTGAATCC+TGG | + | Chr7:56533882-56533901 | None:intergenic | 40.0% | |
| GATCCTAAATCCTCTCTTTC+TGG | - | Chr7:56533297-56533316 | MsG0780038994.01.T01:intron | 40.0% | |
| GATTTCTATCCTATGGCATC+TGG | - | Chr7:56532055-56532074 | MsG0780038994.01.T01:CDS | 40.0% | |
| GCAACTGAATCACTTGAACA+AGG | - | Chr7:56532082-56532101 | MsG0780038994.01.T01:CDS | 40.0% | |
| GTGAGCTTAACTCAGTTGAT+AGG | + | Chr7:56531498-56531517 | None:intergenic | 40.0% | |
| TATATCTGCATGTACATGGC+AGG | - | Chr7:56533978-56533997 | MsG0780038994.01.T01:intron | 40.0% | |
| TCAACATCCGCTTTGACAAA+CGG | - | Chr7:56533595-56533614 | MsG0780038994.01.T01:intron | 40.0% | |
| TCAACTTGCACGTTTGATAG+CGG | - | Chr7:56533255-56533274 | MsG0780038994.01.T01:intron | 40.0% | |
| TCCACGTTATGAAAGCAGAA+AGG | - | Chr7:56533794-56533813 | MsG0780038994.01.T01:intron | 40.0% | |
| TCCTCTGACAGACTTTATCA+AGG | - | Chr7:56532852-56532871 | MsG0780038994.01.T01:CDS | 40.0% | |
| TCCTTGATAAAGTCTGTCAG+AGG | + | Chr7:56532856-56532875 | None:intergenic | 40.0% | |
| TCCTTTCTGCTTTCATAACG+TGG | + | Chr7:56533798-56533817 | None:intergenic | 40.0% | |
| TGTGTGATGCCTAATGATCT+TGG | - | Chr7:56532613-56532632 | MsG0780038994.01.T01:CDS | 40.0% | |
| TTAGCCCAAACTTCTTCCTT+TGG | + | Chr7:56534077-56534096 | None:intergenic | 40.0% | |
| TTAGGATCAACAAGTTTCGC+GGG | + | Chr7:56533285-56533304 | None:intergenic | 40.0% | |
| TTTCCTCCACGTCATTAAGA+GGG | + | Chr7:56533425-56533444 | None:intergenic | 40.0% | |
| TTTCTAACATTTCCCATGGG+AGG | - | Chr7:56533048-56533067 | MsG0780038994.01.T01:CDS | 40.0% | |
| ! | AAAACGGATTTGACTCCTGT+TGG | - | Chr7:56532541-56532560 | MsG0780038994.01.T01:CDS | 40.0% |
| ! | AAACGGATTTGACTCCTGTT+GGG | - | Chr7:56532542-56532561 | MsG0780038994.01.T01:CDS | 40.0% |
| ! | AGAGAGATGTTTAAGGTCAC+AGG | - | Chr7:56533149-56533168 | MsG0780038994.01.T01:CDS | 40.0% |
| ! | AGGAGTCAAATCCGTTTTGA+CGG | + | Chr7:56532539-56532558 | None:intergenic | 40.0% |
| ! | AGTATTTTACGTGCAAGGAC+TGG | - | Chr7:56532422-56532441 | MsG0780038994.01.T01:intron | 40.0% |
| ! | CCAACGTTACAGTTTAGGAT+TGG | - | Chr7:56532898-56532917 | MsG0780038994.01.T01:CDS | 40.0% |
| ! | CTGGTTCTTGAGTCCAAAAT+TGG | + | Chr7:56533211-56533230 | None:intergenic | 40.0% |
| ! | CTTTCTGGAGGATATGTCAA+AGG | - | Chr7:56533312-56533331 | MsG0780038994.01.T01:intron | 40.0% |
| !! | AAGAAGGAGGCATGTTTTCT+CGG | - | Chr7:56532712-56532731 | MsG0780038994.01.T01:CDS | 40.0% |
| AAGTCCTGGTAATCCGAAGT+TGG | - | Chr7:56533817-56533836 | MsG0780038994.01.T01:intron | 45.0% | |
| ACAGCGTCAATGGATGACAT+TGG | + | Chr7:56533378-56533397 | None:intergenic | 45.0% | |
| ACGCCTCCATTGAGTTTCTA+GGG | + | Chr7:56532360-56532379 | None:intergenic | 45.0% | |
| AGCTCCTCTCTTTCTTGGAT+TGG | + | Chr7:56531129-56531148 | None:intergenic | 45.0% | |
| AGTACCCTTAGAGGAAGGTA+AGG | + | Chr7:56531190-56531209 | None:intergenic | 45.0% | |
| ATTTGCAACACTCCTCCCAT+GGG | + | Chr7:56533063-56533082 | None:intergenic | 45.0% | |
| CAAAGCTACTGCCGTCAAAA+CGG | - | Chr7:56532525-56532544 | MsG0780038994.01.T01:intron | 45.0% | |
| CAACCCTAGAAACTCAATGG+AGG | - | Chr7:56532354-56532373 | MsG0780038994.01.T01:CDS | 45.0% | |
| CCTAAATCCTCTCTTTCTGG+AGG | - | Chr7:56533300-56533319 | MsG0780038994.01.T01:intron | 45.0% | |
| CCTCCAGAAAGAGAGGATTT+AGG | + | Chr7:56533303-56533322 | None:intergenic | 45.0% | |
| CTGACCCAACGTTACAGTTT+AGG | - | Chr7:56532893-56532912 | MsG0780038994.01.T01:CDS | 45.0% | |
| GACATATCCTCCAGAAAGAG+AGG | + | Chr7:56533310-56533329 | None:intergenic | 45.0% | |
| GATTTGACTCCTGTTGGGAA+TGG | - | Chr7:56532547-56532566 | MsG0780038994.01.T01:CDS | 45.0% | |
| GCTCCTCTCTTTCTTGGATT+GGG | + | Chr7:56531128-56531147 | None:intergenic | 45.0% | |
| GTACAACCTGAAGAAGCCAA+AGG | - | Chr7:56534058-56534077 | MsG0780038994.01.T01:CDS | 45.0% | |
| GTACTAAGCAGCTCGAACTT+GGG | - | Chr7:56531205-56531224 | MsG0780038994.01.T01:CDS | 45.0% | |
| GTTGACGCACAAGTTCCAAT+TGG | + | Chr7:56533240-56533259 | None:intergenic | 45.0% | |
| GTTGTCGACCAAAACTCTCA+AGG | + | Chr7:56532119-56532138 | None:intergenic | 45.0% | |
| GTTTGTCAAAGCGGATGTTG+AGG | + | Chr7:56533596-56533615 | None:intergenic | 45.0% | |
| TACGCCTCCATTGAGTTTCT+AGG | + | Chr7:56532361-56532380 | None:intergenic | 45.0% | |
| TGAAAGCAGAAAGGAAGTCC+TGG | - | Chr7:56533803-56533822 | MsG0780038994.01.T01:intron | 45.0% | |
| TGACCCAATCCAAGAAAGAG+AGG | - | Chr7:56531122-56531141 | MsG0780038994.01.T01:CDS | 45.0% | |
| TGATCCAACTTCGGATTACC+AGG | + | Chr7:56533824-56533843 | None:intergenic | 45.0% | |
| TGCTTAGTACCCTTAGAGGA+AGG | + | Chr7:56531195-56531214 | None:intergenic | 45.0% | |
| TGTATATGCTGAAGCAGGGA+AGG | - | Chr7:56532153-56532172 | MsG0780038994.01.T01:CDS | 45.0% | |
| TTGCACGTAAAATACTGCGC+AGG | + | Chr7:56532418-56532437 | None:intergenic | 45.0% | |
| ! | CGAAGTCACCTTGAGAGTTT+TGG | - | Chr7:56532108-56532127 | MsG0780038994.01.T01:CDS | 45.0% |
| ! | CTTCTTCCTTTGGCTTCTTC+AGG | + | Chr7:56534067-56534086 | None:intergenic | 45.0% |
| ! | TGCGCAGTATTTTACGTGCA+AGG | - | Chr7:56532417-56532436 | MsG0780038994.01.T01:intron | 45.0% |
| !! | CGTTAGTATTGGTGTAGAGG+AGG | - | Chr7:56533449-56533468 | MsG0780038994.01.T01:intron | 45.0% |
| !! | GGAGTGTTGCAAATGCTAGA+AGG | - | Chr7:56533069-56533088 | MsG0780038994.01.T01:CDS | 45.0% |
| !! | GGCTTCTTCAGGTTGTACAA+TGG | + | Chr7:56534056-56534075 | None:intergenic | 45.0% |
| AAAGAGAGGAGCTGCGGATT+TGG | - | Chr7:56531136-56531155 | MsG0780038994.01.T01:CDS | 50.0% | |
| AACGGCCTCAAGCAGTACAT+AGG | - | Chr7:56533613-56533632 | MsG0780038994.01.T01:intron | 50.0% | |
| AGCTCGAACTTGGGACATCT+CGG | - | Chr7:56531214-56531233 | MsG0780038994.01.T01:CDS | 50.0% | |
| CATTTGCAACACTCCTCCCA+TGG | + | Chr7:56533064-56533083 | None:intergenic | 50.0% | |
| CTTGAGGCCGTTTGTCAAAG+CGG | + | Chr7:56533605-56533624 | None:intergenic | 50.0% | |
| GAAGGTCCCTCTTAATGACG+TGG | - | Chr7:56533416-56533435 | MsG0780038994.01.T01:intron | 50.0% | |
| GACAGCCATGCTTCATTCGA+TGG | + | Chr7:56533917-56533936 | None:intergenic | 50.0% | |
| GAGCTGCTTAGTACCCTTAG+AGG | + | Chr7:56531199-56531218 | None:intergenic | 50.0% | |
| GGTACTAAGCAGCTCGAACT+TGG | - | Chr7:56531204-56531223 | MsG0780038994.01.T01:CDS | 50.0% | |
| GTTGCAATGCCAGATGCCAT+AGG | + | Chr7:56532067-56532086 | None:intergenic | 50.0% | |
| TCCAAGAAAGAGAGGAGCTG+CGG | - | Chr7:56531130-56531149 | MsG0780038994.01.T01:CDS | 50.0% | |
| ! | AAGGACTGGCAGTCTTGTAG+GGG | - | Chr7:56532436-56532455 | MsG0780038994.01.T01:intron | 50.0% |
| ! | CAAGGACTGGCAGTCTTGTA+GGG | - | Chr7:56532435-56532454 | MsG0780038994.01.T01:intron | 50.0% |
| GGTCCCTCTTAATGACGTGG+AGG | - | Chr7:56533419-56533438 | MsG0780038994.01.T01:intron | 55.0% | |
| TCCGCAGCTCCTCTCTTTCT+TGG | + | Chr7:56531134-56531153 | None:intergenic | 55.0% | |
| ! | GCAAGGACTGGCAGTCTTGT+AGG | - | Chr7:56532434-56532453 | MsG0780038994.01.T01:intron | 55.0% |
| GTGGAGTAGTGGCGTGTCTG+CGG | - | Chr7:56531437-56531456 | MsG0780038994.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 56531118 | 56534115 | 56531118 | ID=MsG0780038994.01;Name=MsG0780038994.01 |
| Chr7 | mRNA | 56531118 | 56534115 | 56531118 | ID=MsG0780038994.01.T01;Parent=MsG0780038994.01;Name=MsG0780038994.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|1|1|5|0|520 |
| Chr7 | exon | 56534054 | 56534115 | 56534054 | ID=MsG0780038994.01.T01:exon:8068;Parent=MsG0780038994.01.T01 |
| Chr7 | exon | 56532531 | 56533188 | 56532531 | ID=MsG0780038994.01.T01:exon:8067;Parent=MsG0780038994.01.T01 |
| Chr7 | exon | 56531763 | 56532419 | 56531763 | ID=MsG0780038994.01.T01:exon:8066;Parent=MsG0780038994.01.T01 |
| Chr7 | exon | 56531599 | 56531668 | 56531599 | ID=MsG0780038994.01.T01:exon:8065;Parent=MsG0780038994.01.T01 |
| Chr7 | exon | 56531118 | 56531233 | 56531118 | ID=MsG0780038994.01.T01:exon:8064;Parent=MsG0780038994.01.T01 |
| Chr7 | CDS | 56534054 | 56534115 | 56534054 | ID=MsG0780038994.01.T01:cds;Parent=MsG0780038994.01.T01 |
| Chr7 | CDS | 56532531 | 56533188 | 56532531 | ID=MsG0780038994.01.T01:cds;Parent=MsG0780038994.01.T01 |
| Chr7 | CDS | 56531763 | 56532419 | 56531763 | ID=MsG0780038994.01.T01:cds;Parent=MsG0780038994.01.T01 |
| Chr7 | CDS | 56531599 | 56531668 | 56531599 | ID=MsG0780038994.01.T01:cds;Parent=MsG0780038994.01.T01 |
| Chr7 | CDS | 56531118 | 56531233 | 56531118 | ID=MsG0780038994.01.T01:cds;Parent=MsG0780038994.01.T01 |
| Gene Sequence |
| Protein sequence |
