Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018748.01.T01 | AES86950.1 | 77.186 | 469 | 72 | 5 | 1 | 456 | 1 | 447 | 0 | 699 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018748.01.T01 | G7JQ74 | 77.186 | 469 | 72 | 5 | 1 | 456 | 1 | 447 | 0.0 | 699 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018748.01.T01 | MTR_4g017410 | 77.186 | 469 | 72 | 5 | 1 | 456 | 1 | 447 | 0.0 | 699 |
MsG0480018748.01.T01 | MTR_4g017440 | 67.949 | 468 | 135 | 6 | 1 | 456 | 1 | 465 | 0.0 | 603 |
MsG0480018748.01.T01 | MTR_4g017830 | 66.098 | 469 | 141 | 5 | 1 | 456 | 1 | 464 | 0.0 | 602 |
MsG0480018748.01.T01 | MTR_4g017550 | 71.663 | 427 | 105 | 5 | 39 | 456 | 18 | 437 | 0.0 | 594 |
MsG0480018748.01.T01 | MTR_4g017550 | 28.571 | 245 | 127 | 9 | 9 | 233 | 244 | 460 | 4.24e-13 | 71.6 |
MsG0480018748.01.T01 | MTR_4g017470 | 67.161 | 472 | 100 | 6 | 1 | 456 | 1 | 433 | 0.0 | 584 |
MsG0480018748.01.T01 | MTR_4g019340 | 63.871 | 465 | 126 | 7 | 10 | 456 | 36 | 476 | 0.0 | 553 |
MsG0480018748.01.T01 | MTR_4g017610 | 61.926 | 457 | 158 | 8 | 1 | 456 | 1 | 442 | 0.0 | 535 |
MsG0480018748.01.T01 | MTR_4g019310 | 39.203 | 477 | 244 | 15 | 1 | 456 | 1 | 452 | 5.53e-94 | 295 |
MsG0480018748.01.T01 | MTR_4g019310 | 26.378 | 254 | 162 | 9 | 4 | 249 | 257 | 493 | 3.17e-12 | 68.9 |
MsG0480018748.01.T01 | MTR_7g066410 | 34.350 | 492 | 256 | 17 | 13 | 460 | 11 | 479 | 4.69e-66 | 222 |
MsG0480018748.01.T01 | MTR_7g066410 | 26.000 | 250 | 151 | 7 | 5 | 240 | 277 | 506 | 8.33e-12 | 67.8 |
MsG0480018748.01.T01 | MTR_7g066570 | 35.282 | 479 | 251 | 17 | 1 | 456 | 1 | 443 | 5.82e-65 | 221 |
MsG0480018748.01.T01 | MTR_7g066570 | 28.000 | 250 | 139 | 10 | 6 | 240 | 251 | 474 | 4.74e-14 | 75.1 |
MsG0480018748.01.T01 | MTR_7g058710 | 33.473 | 478 | 244 | 18 | 1 | 449 | 1 | 433 | 4.85e-63 | 213 |
MsG0480018748.01.T01 | MTR_7g066350 | 33.895 | 475 | 229 | 16 | 3 | 456 | 2 | 412 | 6.09e-63 | 212 |
MsG0480018748.01.T01 | MTR_7g066340 | 33.547 | 468 | 247 | 15 | 1 | 456 | 1 | 416 | 2.57e-62 | 211 |
MsG0480018748.01.T01 | MTR_7g066340 | 27.119 | 236 | 128 | 5 | 5 | 240 | 256 | 447 | 7.49e-15 | 77.4 |
MsG0480018748.01.T01 | MTR_7g066430 | 32.906 | 468 | 264 | 14 | 13 | 455 | 5 | 447 | 3.64e-59 | 203 |
MsG0480018748.01.T01 | MTR_7g066260 | 32.766 | 470 | 240 | 14 | 8 | 456 | 11 | 425 | 7.04e-59 | 202 |
MsG0480018748.01.T01 | MTR_7g066260 | 27.586 | 232 | 123 | 9 | 11 | 240 | 268 | 456 | 3.28e-11 | 65.9 |
MsG0480018748.01.T01 | MTR_7g063900 | 32.645 | 484 | 259 | 16 | 1 | 456 | 1 | 445 | 8.68e-57 | 197 |
MsG0480018748.01.T01 | MTR_7g063660 | 33.333 | 465 | 259 | 17 | 8 | 456 | 5 | 434 | 1.21e-54 | 191 |
MsG0480018748.01.T01 | MTR_7g063660 | 29.167 | 192 | 107 | 6 | 264 | 442 | 1 | 176 | 2.62e-13 | 72.4 |
MsG0480018748.01.T01 | MTR_1g041315 | 33.874 | 493 | 226 | 21 | 1 | 456 | 1 | 430 | 9.05e-54 | 189 |
MsG0480018748.01.T01 | MTR_7g012680 | 32.181 | 463 | 230 | 17 | 5 | 450 | 7 | 402 | 1.66e-52 | 184 |
MsG0480018748.01.T01 | MTR_7g066360 | 32.979 | 470 | 239 | 16 | 2 | 456 | 4 | 412 | 1.14e-50 | 180 |
MsG0480018748.01.T01 | MTR_7g062280 | 32.172 | 488 | 259 | 17 | 1 | 456 | 1 | 448 | 4.81e-49 | 176 |
MsG0480018748.01.T01 | MTR_7g066290 | 37.366 | 372 | 190 | 13 | 7 | 357 | 12 | 361 | 5.78e-49 | 174 |
MsG0480018748.01.T01 | MTR_7g063880 | 31.838 | 468 | 250 | 19 | 1 | 449 | 1 | 418 | 2.22e-48 | 174 |
MsG0480018748.01.T01 | MTR_7g066400 | 32.285 | 477 | 225 | 20 | 1 | 456 | 1 | 400 | 7.71e-48 | 172 |
MsG0480018748.01.T01 | MTR_7g066580 | 29.247 | 465 | 246 | 14 | 18 | 456 | 1 | 408 | 4.39e-47 | 169 |
MsG0480018748.01.T01 | MTR_7g066580 | 27.801 | 241 | 132 | 7 | 11 | 232 | 214 | 431 | 3.93e-13 | 71.6 |
MsG0480018748.01.T01 | MTR_7g063830 | 31.754 | 422 | 227 | 12 | 1 | 391 | 1 | 392 | 5.92e-47 | 169 |
MsG0480018748.01.T01 | MTR_7g063830 | 27.419 | 186 | 109 | 5 | 267 | 439 | 5 | 177 | 3.63e-11 | 65.5 |
MsG0480018748.01.T01 | MTR_7g062300 | 30.977 | 481 | 262 | 17 | 1 | 456 | 1 | 436 | 8.41e-47 | 169 |
MsG0480018748.01.T01 | MTR_7g063890 | 30.704 | 469 | 261 | 15 | 15 | 456 | 30 | 461 | 9.48e-47 | 170 |
MsG0480018748.01.T01 | MTR_4g019240 | 65.600 | 125 | 38 | 3 | 1 | 124 | 1 | 121 | 7.62e-46 | 159 |
MsG0480018748.01.T01 | MTR_7g063840 | 32.474 | 388 | 212 | 13 | 1 | 370 | 1 | 356 | 8.74e-43 | 158 |
MsG0480018748.01.T01 | MTR_7g066480 | 30.989 | 455 | 216 | 15 | 13 | 456 | 17 | 384 | 3.79e-40 | 150 |
MsG0480018748.01.T01 | MTR_7g066310 | 29.387 | 473 | 181 | 15 | 7 | 456 | 4 | 346 | 5.15e-40 | 149 |
MsG0480018748.01.T01 | MTR_3g065200 | 30.134 | 448 | 240 | 17 | 13 | 455 | 4 | 383 | 6.90e-40 | 150 |
MsG0480018748.01.T01 | MTR_7g063820 | 30.870 | 460 | 260 | 16 | 1 | 439 | 1 | 423 | 1.38e-38 | 147 |
MsG0480018748.01.T01 | MTR_7g058700 | 31.496 | 381 | 170 | 13 | 24 | 367 | 531 | 857 | 2.30e-36 | 144 |
MsG0480018748.01.T01 | MTR_7g063920 | 27.837 | 467 | 252 | 13 | 1 | 456 | 1 | 393 | 3.97e-36 | 139 |
MsG0480018748.01.T01 | MTR_7g063670 | 29.386 | 456 | 248 | 15 | 1 | 442 | 4 | 399 | 6.16e-34 | 134 |
MsG0480018748.01.T01 | MTR_2g029400 | 26.739 | 460 | 235 | 10 | 8 | 456 | 10 | 378 | 1.42e-33 | 132 |
MsG0480018748.01.T01 | MTR_7g066490 | 33.028 | 327 | 184 | 11 | 13 | 335 | 17 | 312 | 1.99e-33 | 131 |
MsG0480018748.01.T01 | MTR_3g007740 | 31.579 | 342 | 192 | 10 | 1 | 335 | 1 | 307 | 8.86e-33 | 130 |
MsG0480018748.01.T01 | MTR_1g014060 | 35.193 | 233 | 126 | 9 | 13 | 238 | 1 | 215 | 2.30e-28 | 116 |
MsG0480018748.01.T01 | MTR_7g066280 | 27.778 | 396 | 203 | 18 | 101 | 456 | 1 | 353 | 6.59e-23 | 101 |
MsG0480018748.01.T01 | MTR_7g062270 | 35.000 | 200 | 100 | 9 | 1 | 192 | 1 | 178 | 2.05e-19 | 90.5 |
MsG0480018748.01.T01 | MTR_8g445860 | 30.126 | 239 | 142 | 9 | 13 | 243 | 14 | 235 | 4.88e-19 | 86.7 |
MsG0480018748.01.T01 | MTR_8g445860 | 28.272 | 191 | 122 | 4 | 268 | 449 | 9 | 193 | 1.18e-12 | 68.2 |
MsG0480018748.01.T01 | MTR_1g115440 | 29.339 | 242 | 143 | 9 | 13 | 243 | 12 | 236 | 6.96e-19 | 86.3 |
MsG0480018748.01.T01 | MTR_7g066680 | 31.855 | 248 | 141 | 9 | 223 | 456 | 37 | 270 | 3.67e-18 | 86.3 |
MsG0480018748.01.T01 | MTR_0150s0010 | 28.740 | 254 | 151 | 9 | 1 | 243 | 1 | 235 | 3.03e-16 | 78.6 |
MsG0480018748.01.T01 | MTR_0150s0010 | 41.791 | 67 | 39 | 0 | 267 | 333 | 5 | 71 | 9.19e-11 | 62.4 |
MsG0480018748.01.T01 | MTR_1g115435 | 27.386 | 241 | 132 | 8 | 13 | 248 | 8 | 210 | 1.73e-15 | 75.9 |
MsG0480018748.01.T01 | MTR_8g023240 | 22.131 | 366 | 223 | 9 | 6 | 349 | 31 | 356 | 1.80e-15 | 79.3 |
MsG0480018748.01.T01 | MTR_1g115455 | 27.419 | 248 | 136 | 8 | 13 | 243 | 10 | 230 | 9.64e-14 | 71.2 |
MsG0480018748.01.T01 | MTR_1g115455 | 38.298 | 94 | 49 | 2 | 264 | 349 | 1 | 93 | 3.65e-12 | 66.6 |
MsG0480018748.01.T01 | MTR_6g006800 | 70.213 | 47 | 13 | 1 | 1 | 47 | 1 | 46 | 2.64e-13 | 65.5 |
MsG0480018748.01.T01 | MTR_1g115450 | 41.333 | 75 | 44 | 0 | 267 | 341 | 2 | 76 | 2.54e-12 | 64.7 |
MsG0480018748.01.T01 | MTR_1g115450 | 35.345 | 116 | 60 | 3 | 13 | 128 | 8 | 108 | 2.01e-11 | 62.4 |
MsG0480018748.01.T01 | MTR_8g445920 | 41.791 | 67 | 39 | 0 | 267 | 333 | 5 | 71 | 3.15e-12 | 63.5 |
MsG0480018748.01.T01 | MTR_8g044890 | 41.791 | 67 | 39 | 0 | 267 | 333 | 5 | 71 | 3.15e-12 | 63.5 |
MsG0480018748.01.T01 | MTR_7g100420 | 49.206 | 63 | 32 | 0 | 12 | 74 | 39 | 101 | 3.27e-12 | 68.6 |
MsG0480018748.01.T01 | MTR_0150s0030 | 42.029 | 69 | 40 | 0 | 267 | 335 | 3 | 71 | 1.06e-11 | 64.7 |
MsG0480018748.01.T01 | MTR_8g445910 | 43.478 | 69 | 39 | 0 | 267 | 335 | 3 | 71 | 5.34e-11 | 63.5 |
MsG0480018748.01.T01 | MTR_8g044880 | 43.478 | 69 | 39 | 0 | 267 | 335 | 3 | 71 | 6.38e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018748.01.T01 | AT5G01120 | 31.659 | 458 | 270 | 12 | 15 | 451 | 12 | 447 | 1.14e-58 | 202 |
MsG0480018748.01.T01 | AT5G43240 | 33.051 | 472 | 263 | 18 | 13 | 456 | 10 | 456 | 1.82e-56 | 196 |
MsG0480018748.01.T01 | AT5G43240 | 33.051 | 472 | 263 | 18 | 13 | 456 | 10 | 456 | 1.82e-56 | 196 |
MsG0480018748.01.T01 | AT5G43240 | 33.051 | 472 | 263 | 18 | 13 | 456 | 10 | 456 | 1.82e-56 | 196 |
MsG0480018748.01.T01 | AT5G01130 | 31.749 | 463 | 245 | 17 | 2 | 454 | 4 | 405 | 4.54e-51 | 181 |
MsG0480018748.01.T01 | AT3G09110 | 35.522 | 335 | 184 | 10 | 9 | 333 | 6 | 318 | 4.45e-49 | 172 |
MsG0480018748.01.T01 | AT5G01140 | 30.357 | 448 | 257 | 14 | 15 | 454 | 12 | 412 | 6.39e-48 | 172 |
MsG0480018748.01.T01 | AT5G01150 | 29.336 | 467 | 282 | 13 | 2 | 452 | 4 | 438 | 1.43e-47 | 172 |
MsG0480018748.01.T01 | AT3G09140 | 29.336 | 467 | 278 | 12 | 11 | 450 | 8 | 449 | 3.38e-47 | 171 |
MsG0480018748.01.T01 | AT3G09140 | 30.189 | 212 | 121 | 8 | 264 | 452 | 1 | 208 | 8.43e-13 | 70.9 |
MsG0480018748.01.T01 | AT3G09140 | 27.677 | 495 | 278 | 13 | 11 | 450 | 8 | 477 | 4.98e-42 | 157 |
MsG0480018748.01.T01 | AT3G09140 | 30.189 | 212 | 121 | 8 | 264 | 452 | 1 | 208 | 1.15e-12 | 70.5 |
MsG0480018748.01.T01 | AT3G09120 | 32.099 | 324 | 193 | 9 | 13 | 326 | 7 | 313 | 7.28e-42 | 152 |
MsG0480018748.01.T01 | AT5G37320 | 30.085 | 472 | 272 | 20 | 7 | 454 | 3 | 440 | 1.82e-36 | 141 |
MsG0480018748.01.T01 | AT5G43240 | 30.195 | 308 | 185 | 10 | 166 | 456 | 18 | 312 | 2.42e-27 | 113 |
Find 102 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGCTTCACATGGATTTC+TGG | 0.119581 | 4:-9350053 | None:intergenic |
CATCATTTGAATTGAGATTT+TGG | 0.129092 | 4:-9349991 | None:intergenic |
CAAGAGAATAATACACAAAA+TGG | 0.224923 | 4:+9350229 | MsG0480018748.01.T01:CDS |
CTTGCAGCTGTTGATGGAAT+TGG | 0.234153 | 4:+9350330 | MsG0480018748.01.T01:CDS |
TAAGATATCACCGGTTTAAA+AGG | 0.235377 | 4:-9351997 | None:intergenic |
AGAAAATGGATCATTGTTTC+TGG | 0.236079 | 4:+9350264 | MsG0480018748.01.T01:CDS |
AGGTCGGTTATCTTTGTTCT+TGG | 0.278077 | 4:-9351323 | None:intergenic |
AGGAGTGATTTCTAAGTCTA+AGG | 0.286294 | 4:+9351747 | MsG0480018748.01.T01:CDS |
ACTACATATTACTATGGTAT+AGG | 0.294051 | 4:+9351676 | MsG0480018748.01.T01:CDS |
CACCAGTGACAACAGGAAAT+TGG | 0.303337 | 4:+9351381 | MsG0480018748.01.T01:CDS |
ATCTCAATTCAAATGATGTT+TGG | 0.325115 | 4:+9349996 | MsG0480018748.01.T01:CDS |
TGCCGTTGATGGTGGCTAAA+AGG | 0.328993 | 4:-9349895 | None:intergenic |
CCCTCAGAATCCAAGTTCTT+AGG | 0.332053 | 4:-9350205 | None:intergenic |
GGGGTCTTTGTAAGAGAAAA+TGG | 0.335839 | 4:+9350250 | MsG0480018748.01.T01:CDS |
GACTTACTTGCAGCTGTTGA+TGG | 0.339065 | 4:+9350324 | MsG0480018748.01.T01:CDS |
GGAATTGGGGTATTCAGATT+TGG | 0.342273 | 4:+9350345 | MsG0480018748.01.T01:CDS |
CTACGTGAATACTCTGTCTT+AGG | 0.344373 | 4:-9351703 | None:intergenic |
GTGAAGAGCGCAGCATTATA+TGG | 0.362149 | 4:+9351850 | MsG0480018748.01.T01:CDS |
TTGCAGCTGTTGATGGAATT+GGG | 0.365599 | 4:+9350331 | MsG0480018748.01.T01:CDS |
CTACATATTACTATGGTATA+GGG | 0.380267 | 4:+9351677 | MsG0480018748.01.T01:CDS |
AATGCTTCACATGGATTTCT+GGG | 0.382524 | 4:-9350052 | None:intergenic |
TTTCGCTACGGGAAGGTGTT+AGG | 0.390074 | 4:+9352080 | MsG0480018748.01.T01:CDS |
AAGAGAATAATACACAAAAT+GGG | 0.398578 | 4:+9350230 | MsG0480018748.01.T01:CDS |
GTGGGTGGTGGTTGAACTTC+CGG | 0.401357 | 4:-9351655 | None:intergenic |
AGCTTCCTTACCATGCCATT+AGG | 0.401925 | 4:+9351484 | MsG0480018748.01.T01:CDS |
ACACGTCCAGCAAAAGAATT+AGG | 0.402172 | 4:-9351529 | None:intergenic |
CCACCCACTACATATTACTA+TGG | 0.404760 | 4:+9351670 | MsG0480018748.01.T01:CDS |
AAACCAGCCCCTCAACATTC+CGG | 0.416958 | 4:+9351636 | MsG0480018748.01.T01:CDS |
TTCTTAGGCTGTCTATTAGT+GGG | 0.418576 | 4:-9350190 | None:intergenic |
CAAAGGCTCATCAAAGGTTA+AGG | 0.420904 | 4:-9351275 | None:intergenic |
TCTCGGTTCCATTGCAATCA+AGG | 0.422873 | 4:-9351791 | None:intergenic |
ACTGCTGATGCAAGTTGGTT+AGG | 0.427676 | 4:-9351343 | None:intergenic |
GTTCTTAGGCTGTCTATTAG+TGG | 0.429169 | 4:-9350191 | None:intergenic |
CTTCCGGAATGTTGAGGGGC+TGG | 0.432152 | 4:-9351639 | None:intergenic |
TTCAGATTTGGCTCAAATAG+AGG | 0.433676 | 4:+9350357 | MsG0480018748.01.T01:CDS |
CTTGATCCGTTGAGGGATCT+CGG | 0.448216 | 4:-9351808 | None:intergenic |
GTACAAAAGTGTGGAGAACT+TGG | 0.451915 | 4:+9351561 | MsG0480018748.01.T01:CDS |
AATGCCCCTCAAAATATTAG+TGG | 0.452492 | 4:+9349775 | MsG0480018748.01.T01:CDS |
GGATCCGTTGTAAAGCTTCT+CGG | 0.455599 | 4:+9351505 | MsG0480018748.01.T01:CDS |
TGCCTTGCACCAGTGACAAC+AGG | 0.457008 | 4:+9351374 | MsG0480018748.01.T01:CDS |
TTGAACTTCCGGAATGTTGA+GGG | 0.460651 | 4:-9351644 | None:intergenic |
AACCCTTGAGAATCGAGGTC+CGG | 0.462024 | 4:+9352050 | MsG0480018748.01.T01:CDS |
TAATAGACAGCCTAAGAACT+TGG | 0.472478 | 4:+9350195 | MsG0480018748.01.T01:CDS |
AGCAAAATCCTTGATTGCAA+TGG | 0.473177 | 4:+9351783 | MsG0480018748.01.T01:CDS |
ATGTCTGTGTTACTCGATCC+TGG | 0.473190 | 4:+9351589 | MsG0480018748.01.T01:CDS |
GTTGAACTTCCGGAATGTTG+AGG | 0.473700 | 4:-9351645 | None:intergenic |
AACAGCATTTGTTTGCAGAC+AGG | 0.475302 | 4:-9350025 | None:intergenic |
ATCCAATTTCCTGTTGTCAC+TGG | 0.480035 | 4:-9351383 | None:intergenic |
GCTGGTTTAGACAACTAAAC+TGG | 0.481695 | 4:-9351621 | None:intergenic |
TGGTGCCAAGTGGAAGAGAT+AGG | 0.487529 | 4:-9349865 | None:intergenic |
GGATCAAGAGATGATGCTAC+TGG | 0.488902 | 4:+9351823 | MsG0480018748.01.T01:CDS |
AGCTTCCTATCTCTTCCACT+TGG | 0.491188 | 4:+9349860 | MsG0480018748.01.T01:CDS |
ATCATCTCTTGATCCGTTGA+GGG | 0.492757 | 4:-9351815 | None:intergenic |
AGCTTTACAACGGATCCTAA+TGG | 0.495250 | 4:-9351499 | None:intergenic |
GAAGTCAACAAAATCTCCAT+TGG | 0.498206 | 4:-9351455 | None:intergenic |
TAGCTTGCACCGTTATATAG+AGG | 0.502779 | 4:+9351723 | MsG0480018748.01.T01:CDS |
ACCCTTGAGAATCGAGGTCC+GGG | 0.505758 | 4:+9352051 | MsG0480018748.01.T01:CDS |
CAGAATCTTGATTGTACCTG+TGG | 0.516497 | 4:+9350163 | MsG0480018748.01.T01:CDS |
GCCTAAGAACTTGGATTCTG+AGG | 0.520425 | 4:+9350204 | MsG0480018748.01.T01:CDS |
AGGAAAGAATCAGAAGAAAG+TGG | 0.520631 | 4:-9351898 | None:intergenic |
CTAAACTGGTGTGCTATACC+AGG | 0.532086 | 4:-9351607 | None:intergenic |
CTCTAACTGCTGATGCAAGT+TGG | 0.535856 | 4:-9351348 | None:intergenic |
CTCCCGGACCTCGATTCTCA+AGG | 0.537806 | 4:-9352053 | None:intergenic |
TTAAATCTTTCAAATATGAA+AGG | 0.539040 | 4:-9351918 | None:intergenic |
AGCGCAGCATTATATGGTAT+AGG | 0.542285 | 4:+9351856 | MsG0480018748.01.T01:CDS |
AAGTAAGTCACAGACGAACT+TGG | 0.543235 | 4:-9350310 | None:intergenic |
CCCGTAGCGAAAACAACTCC+CGG | 0.563638 | 4:-9352069 | None:intergenic |
TTCCTGTTGTCACTGGTGCA+AGG | 0.566131 | 4:-9351376 | None:intergenic |
GGAGTGATTTCTAAGTCTAA+GGG | 0.566521 | 4:+9351748 | MsG0480018748.01.T01:CDS |
TCACTCCTCCCTCTATATAA+CGG | 0.567399 | 4:-9351732 | None:intergenic |
CTGATGCAAGTTGGTTAGGT+CGG | 0.567745 | 4:-9351339 | None:intergenic |
ATAATCTTTGCAGAAACCAA+TGG | 0.568343 | 4:+9351439 | MsG0480018748.01.T01:CDS |
TGGTAATTTGTACAAAAGTG+TGG | 0.569416 | 4:+9351552 | MsG0480018748.01.T01:CDS |
CATCATCTCTTGATCCGTTG+AGG | 0.577105 | 4:-9351816 | None:intergenic |
CGGATCCTAATGGCATGGTA+AGG | 0.586168 | 4:-9351489 | None:intergenic |
CCAAGATAAAACAAAGAGGA+AGG | 0.589756 | 4:-9351942 | None:intergenic |
TTCATGCACAATGCTTCACA+TGG | 0.593963 | 4:-9350061 | None:intergenic |
TCCCGGACCTCGATTCTCAA+GGG | 0.595882 | 4:-9352052 | None:intergenic |
AAAACCAAGATAAAACAAAG+AGG | 0.598550 | 4:-9351946 | None:intergenic |
TAGTAATATGTAGTGGGTGG+TGG | 0.598894 | 4:-9351667 | None:intergenic |
ATTTGTCAAAGGCTCATCAA+AGG | 0.603692 | 4:-9351281 | None:intergenic |
AGCTTGCACCGTTATATAGA+GGG | 0.609591 | 4:+9351724 | MsG0480018748.01.T01:CDS |
ATACCATAGTAATATGTAGT+GGG | 0.610428 | 4:-9351673 | None:intergenic |
TGCAGCTGTTGATGGAATTG+GGG | 0.616569 | 4:+9350332 | MsG0480018748.01.T01:CDS |
AGAGAATAATACACAAAATG+GGG | 0.618529 | 4:+9350231 | MsG0480018748.01.T01:CDS |
CCTAAGAACTTGGATTCTGA+GGG | 0.620194 | 4:+9350205 | MsG0480018748.01.T01:CDS |
ACAAAACATTGGCAAACAAG+AGG | 0.622350 | 4:+9350387 | MsG0480018748.01.T01:CDS |
GAGGAAGTCACACAAAACAT+TGG | 0.622642 | 4:+9350376 | MsG0480018748.01.T01:CDS |
AGGTTAAGGTATGCTTGAGG+AGG | 0.627220 | 4:-9351261 | None:intergenic |
TATACCATAGTAATATGTAG+TGG | 0.628329 | 4:-9351674 | None:intergenic |
CCATAGTAATATGTAGTGGG+TGG | 0.647197 | 4:-9351670 | None:intergenic |
TACAACGGATCCTAATGGCA+TGG | 0.650564 | 4:-9351494 | None:intergenic |
AGCAAAACCCTTGAGAATCG+AGG | 0.652812 | 4:+9352045 | MsG0480018748.01.T01:CDS |
CGTTGATGGTGGCTAAAAGG+CGG | 0.657293 | 4:-9349892 | None:intergenic |
TGAACTTCCGGAATGTTGAG+GGG | 0.660190 | 4:-9351643 | None:intergenic |
CAAAGGTTAAGGTATGCTTG+AGG | 0.663046 | 4:-9351264 | None:intergenic |
GGTGGCTAAAAGGCGGACAA+TGG | 0.668124 | 4:-9349885 | None:intergenic |
ATGGAACCGAGATCCCTCAA+CGG | 0.675491 | 4:+9351802 | MsG0480018748.01.T01:CDS |
TTGCACCGTTATATAGAGGG+AGG | 0.682014 | 4:+9351727 | MsG0480018748.01.T01:CDS |
AGGCGGACAATGGTGCCAAG+TGG | 0.686421 | 4:-9349875 | None:intergenic |
AGGTCCGAGAAGCTTTACAA+CGG | 0.701078 | 4:-9351509 | None:intergenic |
GATCGAGTAACACAGACATG+CGG | 0.763585 | 4:-9351585 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAGATCTATTAAAGAA+AGG | - | Chr4:9351160-9351179 | None:intergenic | 15.0% |
!! | ACAAAAATAAAGAAATACTA+TGG | + | Chr4:9350653-9350672 | MsG0480018748.01.T01:intron | 15.0% |
!! | CAAAAATAAAGAAATACTAT+GGG | + | Chr4:9350654-9350673 | MsG0480018748.01.T01:intron | 15.0% |
!! | TTAAATCTTTCAAATATGAA+AGG | - | Chr4:9351921-9351940 | None:intergenic | 15.0% |
!! | AAGAAAAAATAAGATATCAC+CGG | - | Chr4:9352009-9352028 | None:intergenic | 20.0% |
!! | AAGAGAATAATACACAAAAT+GGG | + | Chr4:9350230-9350249 | MsG0480018748.01.T01:CDS | 20.0% |
!! | AATATCAAATAATAGTCGTA+TGG | - | Chr4:9350828-9350847 | None:intergenic | 20.0% |
!! | AATTAACAAATTCAATGCAA+TGG | - | Chr4:9350460-9350479 | None:intergenic | 20.0% |
!! | ATTAACAAATTCAATGCAAT+GGG | - | Chr4:9350459-9350478 | None:intergenic | 20.0% |
!! | TAATTAAAAAAATTGCATCC+TGG | + | Chr4:9350908-9350927 | MsG0480018748.01.T01:intron | 20.0% |
!! | TTGTTAATTTCACAATCATT+TGG | + | Chr4:9350471-9350490 | MsG0480018748.01.T01:intron | 20.0% |
!!! | AACTTTTAGTTGAAATCTAA+AGG | + | Chr4:9350732-9350751 | MsG0480018748.01.T01:intron | 20.0% |
!!! | GTGATATCTTATTTTTTCTT+GGG | + | Chr4:9352009-9352028 | MsG0480018748.01.T01:CDS | 20.0% |
!!! | TTTTTTTGTTAGAAAACATG+TGG | + | Chr4:9351071-9351090 | MsG0480018748.01.T01:intron | 20.0% |
! | AAAACCAAGATAAAACAAAG+AGG | - | Chr4:9351949-9351968 | None:intergenic | 25.0% |
! | ACAAGAAAAAGCAATACTAT+GGG | + | Chr4:9350697-9350716 | MsG0480018748.01.T01:intron | 25.0% |
! | ACTACATATTACTATGGTAT+AGG | + | Chr4:9351676-9351695 | MsG0480018748.01.T01:CDS | 25.0% |
! | AGAGAATAATACACAAAATG+GGG | + | Chr4:9350231-9350250 | MsG0480018748.01.T01:CDS | 25.0% |
! | ATACCATAGTAATATGTAGT+GGG | - | Chr4:9351676-9351695 | None:intergenic | 25.0% |
! | ATCTCAATTCAAATGATGTT+TGG | + | Chr4:9349996-9350015 | MsG0480018748.01.T01:CDS | 25.0% |
! | CAAGAGAATAATACACAAAA+TGG | + | Chr4:9350229-9350248 | MsG0480018748.01.T01:CDS | 25.0% |
! | CATTTACCAAACATTCTTAT+CGG | - | Chr4:9350766-9350785 | None:intergenic | 25.0% |
! | CTACATATTACTATGGTATA+GGG | + | Chr4:9351677-9351696 | MsG0480018748.01.T01:CDS | 25.0% |
! | GCAAAAAATGTATTTGTCAA+AGG | - | Chr4:9351295-9351314 | None:intergenic | 25.0% |
! | TACAAGAAAAAGCAATACTA+TGG | + | Chr4:9350696-9350715 | MsG0480018748.01.T01:intron | 25.0% |
! | TATACCATAGTAATATGTAG+TGG | - | Chr4:9351677-9351696 | None:intergenic | 25.0% |
!! | ATTGTTCTTTTATCTTCTTG+TGG | - | Chr4:9349758-9349777 | None:intergenic | 25.0% |
!! | ATTTGAATTGAGATTTTGGA+CGG | - | Chr4:9349990-9350009 | None:intergenic | 25.0% |
!! | CATCATTTGAATTGAGATTT+TGG | - | Chr4:9349994-9350013 | None:intergenic | 25.0% |
!!! | AGTATTGCTTTTTCTTGTAT+TGG | - | Chr4:9350695-9350714 | None:intergenic | 25.0% |
!!! | ATCTTATTTTTTCTTGGGAA+GGG | + | Chr4:9352014-9352033 | MsG0480018748.01.T01:CDS | 25.0% |
!!! | CTTTGTTTTATCTTGGTTTT+CGG | + | Chr4:9351949-9351968 | MsG0480018748.01.T01:CDS | 25.0% |
!!! | GGTGATATCTTATTTTTTCT+TGG | + | Chr4:9352008-9352027 | MsG0480018748.01.T01:CDS | 25.0% |
!!! | GTATTGCTTTTTCTTGTATT+GGG | - | Chr4:9350694-9350713 | None:intergenic | 25.0% |
!!! | TATCTTATTTTTTCTTGGGA+AGG | + | Chr4:9352013-9352032 | MsG0480018748.01.T01:CDS | 25.0% |
!!! | TTTGTCCACTAATATTTTGA+GGG | - | Chr4:9349783-9349802 | None:intergenic | 25.0% |
!!! | TTTGTTTTATCTTGGTTTTC+GGG | + | Chr4:9351950-9351969 | MsG0480018748.01.T01:CDS | 25.0% |
!!! | TTTTTGATGTTTTCAAGGAA+TGG | - | Chr4:9349956-9349975 | None:intergenic | 25.0% |
AGAAAATGGATCATTGTTTC+TGG | + | Chr4:9350264-9350283 | MsG0480018748.01.T01:CDS | 30.0% | |
ATAATCTTTGCAGAAACCAA+TGG | + | Chr4:9351439-9351458 | MsG0480018748.01.T01:CDS | 30.0% | |
CACACAAAAAACTTACTTGA+TGG | - | Chr4:9350115-9350134 | None:intergenic | 30.0% | |
GTGAATAAGCAGTAAATTCA+AGG | - | Chr4:9350598-9350617 | None:intergenic | 30.0% | |
TACTGCTTATTCACCTTAAA+GGG | + | Chr4:9350604-9350623 | MsG0480018748.01.T01:intron | 30.0% | |
TTACTGCTTATTCACCTTAA+AGG | + | Chr4:9350603-9350622 | MsG0480018748.01.T01:intron | 30.0% | |
! | ACAAAGTATGAGAGAGTATA+AGG | + | Chr4:9350875-9350894 | MsG0480018748.01.T01:intron | 30.0% |
! | AGAGGTTTTTGATGTTTTCA+AGG | - | Chr4:9349961-9349980 | None:intergenic | 30.0% |
! | ATTTTTGTCAATTAGCCAAG+TGG | - | Chr4:9350641-9350660 | None:intergenic | 30.0% |
! | GTTTGTCCACTAATATTTTG+AGG | - | Chr4:9349784-9349803 | None:intergenic | 30.0% |
! | TACGTTTGAACCTTTTAAAC+CGG | + | Chr4:9351987-9352006 | MsG0480018748.01.T01:CDS | 30.0% |
! | TGGTAATTTGTACAAAAGTG+TGG | + | Chr4:9351552-9351571 | MsG0480018748.01.T01:CDS | 30.0% |
!! | AAGAAAGTGGTTTTACTCTT+AGG | - | Chr4:9351888-9351907 | None:intergenic | 30.0% |
!! | TAAGATATCACCGGTTTAAA+AGG | - | Chr4:9352000-9352019 | None:intergenic | 30.0% |
!! | TGTTTTTGTTGAAGCAACAA+AGG | + | Chr4:9349817-9349836 | MsG0480018748.01.T01:CDS | 30.0% |
!! | TTGTCCACTAATATTTTGAG+GGG | - | Chr4:9349782-9349801 | None:intergenic | 30.0% |
AACACCACCATATTAGAGTA+AGG | + | Chr4:9351017-9351036 | MsG0480018748.01.T01:intron | 35.0% | |
AATGCCCCTCAAAATATTAG+TGG | + | Chr4:9349775-9349794 | MsG0480018748.01.T01:CDS | 35.0% | |
AATGCTTCACATGGATTTCT+GGG | - | Chr4:9350055-9350074 | None:intergenic | 35.0% | |
ACAAAACATTGGCAAACAAG+AGG | + | Chr4:9350387-9350406 | MsG0480018748.01.T01:CDS | 35.0% | |
AGCAAAATCCTTGATTGCAA+TGG | + | Chr4:9351783-9351802 | MsG0480018748.01.T01:CDS | 35.0% | |
AGGAAAGAATCAGAAGAAAG+TGG | - | Chr4:9351901-9351920 | None:intergenic | 35.0% | |
AGGAGTGATTTCTAAGTCTA+AGG | + | Chr4:9351747-9351766 | MsG0480018748.01.T01:CDS | 35.0% | |
ATTTGTCAAAGGCTCATCAA+AGG | - | Chr4:9351284-9351303 | None:intergenic | 35.0% | |
CCAAGATAAAACAAAGAGGA+AGG | - | Chr4:9351945-9351964 | None:intergenic | 35.0% | |
CTAGTGACCTTACTCTAATA+TGG | - | Chr4:9351027-9351046 | None:intergenic | 35.0% | |
GAAGTCAACAAAATCTCCAT+TGG | - | Chr4:9351458-9351477 | None:intergenic | 35.0% | |
GGAGTGATTTCTAAGTCTAA+GGG | + | Chr4:9351748-9351767 | MsG0480018748.01.T01:CDS | 35.0% | |
TAATAGACAGCCTAAGAACT+TGG | + | Chr4:9350195-9350214 | MsG0480018748.01.T01:CDS | 35.0% | |
TAGAAAACATGTGGTTTCAG+CGG | + | Chr4:9351080-9351099 | MsG0480018748.01.T01:intron | 35.0% | |
TTCTTAGGCTGTCTATTAGT+GGG | - | Chr4:9350193-9350212 | None:intergenic | 35.0% | |
! | AATTGAGATTTTGGACGGTA+CGG | - | Chr4:9349985-9350004 | None:intergenic | 35.0% |
! | TGATCACAACTTAGTTGGTA+GGG | + | Chr4:9350536-9350555 | MsG0480018748.01.T01:intron | 35.0% |
! | TTCAGATTTGGCTCAAATAG+AGG | + | Chr4:9350357-9350376 | MsG0480018748.01.T01:CDS | 35.0% |
!! | TAAGCACCGATAAGAATGTT+TGG | + | Chr4:9350757-9350776 | MsG0480018748.01.T01:intron | 35.0% |
!! | TTGATCATTTTTGCCGTTGA+TGG | - | Chr4:9349909-9349928 | None:intergenic | 35.0% |
!!! | CCTTCCTCTTTGTTTTATCT+TGG | + | Chr4:9351942-9351961 | MsG0480018748.01.T01:CDS | 35.0% |
AAAAATTGCATCCTGGCACA+AGG | + | Chr4:9350915-9350934 | MsG0480018748.01.T01:intron | 40.0% | |
AACAGCATTTGTTTGCAGAC+AGG | - | Chr4:9350028-9350047 | None:intergenic | 40.0% | |
AAGTAAGTCACAGACGAACT+TGG | - | Chr4:9350313-9350332 | None:intergenic | 40.0% | |
ACACGTCCAGCAAAAGAATT+AGG | - | Chr4:9351532-9351551 | None:intergenic | 40.0% | |
AGCGCAGCATTATATGGTAT+AGG | + | Chr4:9351856-9351875 | MsG0480018748.01.T01:CDS | 40.0% | |
AGCTTGCACCGTTATATAGA+GGG | + | Chr4:9351724-9351743 | MsG0480018748.01.T01:CDS | 40.0% | |
AGCTTTACAACGGATCCTAA+TGG | - | Chr4:9351502-9351521 | None:intergenic | 40.0% | |
AGGTCGGTTATCTTTGTTCT+TGG | - | Chr4:9351326-9351345 | None:intergenic | 40.0% | |
ATCATCTCTTGATCCGTTGA+GGG | - | Chr4:9351818-9351837 | None:intergenic | 40.0% | |
ATCCAATTTCCTGTTGTCAC+TGG | - | Chr4:9351386-9351405 | None:intergenic | 40.0% | |
CAAAGGCTCATCAAAGGTTA+AGG | - | Chr4:9351278-9351297 | None:intergenic | 40.0% | |
CAAAGGTTAAGGTATGCTTG+AGG | - | Chr4:9351267-9351286 | None:intergenic | 40.0% | |
CAAGGTTCAAACACCAACTA+CGG | - | Chr4:9350580-9350599 | None:intergenic | 40.0% | |
CAATGCTTCACATGGATTTC+TGG | - | Chr4:9350056-9350075 | None:intergenic | 40.0% | |
CAGAATCTTGATTGTACCTG+TGG | + | Chr4:9350163-9350182 | MsG0480018748.01.T01:CDS | 40.0% | |
CCACCCACTACATATTACTA+TGG | + | Chr4:9351670-9351689 | MsG0480018748.01.T01:CDS | 40.0% | |
CCTAAGAACTTGGATTCTGA+GGG | + | Chr4:9350205-9350224 | MsG0480018748.01.T01:CDS | 40.0% | |
CTACGTGAATACTCTGTCTT+AGG | - | Chr4:9351706-9351725 | None:intergenic | 40.0% | |
CTCTGTGATCACAACTTAGT+TGG | + | Chr4:9350531-9350550 | MsG0480018748.01.T01:intron | 40.0% | |
GAGGAAGTCACACAAAACAT+TGG | + | Chr4:9350376-9350395 | MsG0480018748.01.T01:CDS | 40.0% | |
GGGGTCTTTGTAAGAGAAAA+TGG | + | Chr4:9350250-9350269 | MsG0480018748.01.T01:CDS | 40.0% | |
GTGACCTTACTCTAATATGG+TGG | - | Chr4:9351024-9351043 | None:intergenic | 40.0% | |
GTGATCACAACTTAGTTGGT+AGG | + | Chr4:9350535-9350554 | MsG0480018748.01.T01:intron | 40.0% | |
GTTCTTAGGCTGTCTATTAG+TGG | - | Chr4:9350194-9350213 | None:intergenic | 40.0% | |
TCACTCCTCCCTCTATATAA+CGG | - | Chr4:9351735-9351754 | None:intergenic | 40.0% | |
TTCATGCACAATGCTTCACA+TGG | - | Chr4:9350064-9350083 | None:intergenic | 40.0% | |
TTGAACTTCCGGAATGTTGA+GGG | - | Chr4:9351647-9351666 | None:intergenic | 40.0% | |
! | AATTCTTTTGCTGGACGTGT+TGG | + | Chr4:9351532-9351551 | MsG0480018748.01.T01:CDS | 40.0% |
! | CCATAGTAATATGTAGTGGG+TGG | - | Chr4:9351673-9351692 | None:intergenic | 40.0% |
! | GCTGGTTTAGACAACTAAAC+TGG | - | Chr4:9351624-9351643 | None:intergenic | 40.0% |
! | GGAATTGGGGTATTCAGATT+TGG | + | Chr4:9350345-9350364 | MsG0480018748.01.T01:CDS | 40.0% |
! | GTACAAAAGTGTGGAGAACT+TGG | + | Chr4:9351561-9351580 | MsG0480018748.01.T01:CDS | 40.0% |
! | TAGCTTGCACCGTTATATAG+AGG | + | Chr4:9351723-9351742 | MsG0480018748.01.T01:CDS | 40.0% |
! | TTGCAGCTGTTGATGGAATT+GGG | + | Chr4:9350331-9350350 | MsG0480018748.01.T01:CDS | 40.0% |
!! | ATCATTTTTGCCGTTGATGG+TGG | - | Chr4:9349906-9349925 | None:intergenic | 40.0% |
!! | TAGTAATATGTAGTGGGTGG+TGG | - | Chr4:9351670-9351689 | None:intergenic | 40.0% |
!!! | TCTATTAGTGGGTTTTCCAC+AGG | - | Chr4:9350182-9350201 | None:intergenic | 40.0% |
AAGGAAATCCATCGTAACCC+TGG | - | Chr4:9351141-9351160 | None:intergenic | 45.0% | |
AGCAAAACCCTTGAGAATCG+AGG | + | Chr4:9352045-9352064 | MsG0480018748.01.T01:CDS | 45.0% | |
AGCTTCCTATCTCTTCCACT+TGG | + | Chr4:9349860-9349879 | MsG0480018748.01.T01:CDS | 45.0% | |
AGCTTCCTTACCATGCCATT+AGG | + | Chr4:9351484-9351503 | MsG0480018748.01.T01:CDS | 45.0% | |
AGGTCCGAGAAGCTTTACAA+CGG | - | Chr4:9351512-9351531 | None:intergenic | 45.0% | |
AGGTTAAGGTATGCTTGAGG+AGG | - | Chr4:9351264-9351283 | None:intergenic | 45.0% | |
CACCAGTGACAACAGGAAAT+TGG | + | Chr4:9351381-9351400 | MsG0480018748.01.T01:CDS | 45.0% | |
CATCATCTCTTGATCCGTTG+AGG | - | Chr4:9351819-9351838 | None:intergenic | 45.0% | |
CCCTCAGAATCCAAGTTCTT+AGG | - | Chr4:9350208-9350227 | None:intergenic | 45.0% | |
CTAAACTGGTGTGCTATACC+AGG | - | Chr4:9351610-9351629 | None:intergenic | 45.0% | |
CTCTAACTGCTGATGCAAGT+TGG | - | Chr4:9351351-9351370 | None:intergenic | 45.0% | |
GACTTACTTGCAGCTGTTGA+TGG | + | Chr4:9350324-9350343 | MsG0480018748.01.T01:CDS | 45.0% | |
GATCGAGTAACACAGACATG+CGG | - | Chr4:9351588-9351607 | None:intergenic | 45.0% | |
GCCTAAGAACTTGGATTCTG+AGG | + | Chr4:9350204-9350223 | MsG0480018748.01.T01:CDS | 45.0% | |
GGATCAAGAGATGATGCTAC+TGG | + | Chr4:9351823-9351842 | MsG0480018748.01.T01:CDS | 45.0% | |
GGATCCGTTGTAAAGCTTCT+CGG | + | Chr4:9351505-9351524 | MsG0480018748.01.T01:CDS | 45.0% | |
GTTGAACTTCCGGAATGTTG+AGG | - | Chr4:9351648-9351667 | None:intergenic | 45.0% | |
TACAACGGATCCTAATGGCA+TGG | - | Chr4:9351497-9351516 | None:intergenic | 45.0% | |
TCTCGGTTCCATTGCAATCA+AGG | - | Chr4:9351794-9351813 | None:intergenic | 45.0% | |
TGAACTTCCGGAATGTTGAG+GGG | - | Chr4:9351646-9351665 | None:intergenic | 45.0% | |
TTGCACCGTTATATAGAGGG+AGG | + | Chr4:9351727-9351746 | MsG0480018748.01.T01:CDS | 45.0% | |
! | ACTGAAGCATCTCTTCTCAG+AGG | + | Chr4:9351105-9351124 | MsG0480018748.01.T01:intron | 45.0% |
! | ATGTCTGTGTTACTCGATCC+TGG | + | Chr4:9351589-9351608 | MsG0480018748.01.T01:CDS | 45.0% |
! | CTCGGACCTAATTCTTTTGC+TGG | + | Chr4:9351523-9351542 | MsG0480018748.01.T01:CDS | 45.0% |
! | CTTGCAGCTGTTGATGGAAT+TGG | + | Chr4:9350330-9350349 | MsG0480018748.01.T01:CDS | 45.0% |
! | GTGAAGAGCGCAGCATTATA+TGG | + | Chr4:9351850-9351869 | MsG0480018748.01.T01:CDS | 45.0% |
! | TGCAGCTGTTGATGGAATTG+GGG | + | Chr4:9350332-9350351 | MsG0480018748.01.T01:CDS | 45.0% |
!! | ACTGCTGATGCAAGTTGGTT+AGG | - | Chr4:9351346-9351365 | None:intergenic | 45.0% |
!! | CTGATGCAAGTTGGTTAGGT+CGG | - | Chr4:9351342-9351361 | None:intergenic | 45.0% |
!!! | TATTATTTGATATTTTATAA+TGG | + | Chr4:9350834-9350853 | MsG0480018748.01.T01:intron | 5.0% |
AAACCAGCCCCTCAACATTC+CGG | + | Chr4:9351636-9351655 | MsG0480018748.01.T01:CDS | 50.0% | |
AACCCTTGAGAATCGAGGTC+CGG | + | Chr4:9352050-9352069 | MsG0480018748.01.T01:CDS | 50.0% | |
AATCCATCGTAACCCTGGAG+TGG | - | Chr4:9351136-9351155 | None:intergenic | 50.0% | |
ATGGAACCGAGATCCCTCAA+CGG | + | Chr4:9351802-9351821 | MsG0480018748.01.T01:CDS | 50.0% | |
CGGATCCTAATGGCATGGTA+AGG | - | Chr4:9351492-9351511 | None:intergenic | 50.0% | |
CTTGATCCGTTGAGGGATCT+CGG | - | Chr4:9351811-9351830 | None:intergenic | 50.0% | |
GCATAGCAACATGCCGTAGT+TGG | + | Chr4:9350564-9350583 | MsG0480018748.01.T01:intron | 50.0% | |
GGCTAGAGTCTCACCCTTTA+AGG | - | Chr4:9350620-9350639 | None:intergenic | 50.0% | |
TCAGAGGAACTTCCACTCCA+GGG | + | Chr4:9351121-9351140 | MsG0480018748.01.T01:intron | 50.0% | |
TTCCTGTTGTCACTGGTGCA+AGG | - | Chr4:9351379-9351398 | None:intergenic | 50.0% | |
! | CGCCTTTTAGCCACCATCAA+CGG | + | Chr4:9349893-9349912 | MsG0480018748.01.T01:CDS | 50.0% |
! | GATTTTGGACGGTACGGTAG+AGG | - | Chr4:9349979-9349998 | None:intergenic | 50.0% |
! | TGGTGCCAAGTGGAAGAGAT+AGG | - | Chr4:9349868-9349887 | None:intergenic | 50.0% |
!! | CGTTGATGGTGGCTAAAAGG+CGG | - | Chr4:9349895-9349914 | None:intergenic | 50.0% |
!! | GAGTTGTTTTCGCTACGGGA+AGG | + | Chr4:9352073-9352092 | MsG0480018748.01.T01:CDS | 50.0% |
!! | TCCGGGAGTTGTTTTCGCTA+CGG | + | Chr4:9352068-9352087 | MsG0480018748.01.T01:CDS | 50.0% |
!! | TGCCGTTGATGGTGGCTAAA+AGG | - | Chr4:9349898-9349917 | None:intergenic | 50.0% |
ACCCTTGAGAATCGAGGTCC+GGG | + | Chr4:9352051-9352070 | MsG0480018748.01.T01:CDS | 55.0% | |
AGGGTGAGACTCTAGCCACT+TGG | + | Chr4:9350623-9350642 | MsG0480018748.01.T01:intron | 55.0% | |
ATCCTGGCACAAGGTGTGCA+AGG | + | Chr4:9350924-9350943 | MsG0480018748.01.T01:intron | 55.0% | |
ATCCTTGCACACCTTGTGCC+AGG | - | Chr4:9350929-9350948 | None:intergenic | 55.0% | |
CCCGTAGCGAAAACAACTCC+CGG | - | Chr4:9352072-9352091 | None:intergenic | 55.0% | |
CTCAGAGGAACTTCCACTCC+AGG | + | Chr4:9351120-9351139 | MsG0480018748.01.T01:intron | 55.0% | |
CTTCCACTCCAGGGTTACGA+TGG | + | Chr4:9351130-9351149 | MsG0480018748.01.T01:intron | 55.0% | |
GGTGGCTAAAAGGCGGACAA+TGG | - | Chr4:9349888-9349907 | None:intergenic | 55.0% | |
TCCCGGACCTCGATTCTCAA+GGG | - | Chr4:9352055-9352074 | None:intergenic | 55.0% | |
TGCCTTGCACCAGTGACAAC+AGG | + | Chr4:9351374-9351393 | MsG0480018748.01.T01:CDS | 55.0% | |
! | GTGGGTGGTGGTTGAACTTC+CGG | - | Chr4:9351658-9351677 | None:intergenic | 55.0% |
!! | CCGGGAGTTGTTTTCGCTAC+GGG | + | Chr4:9352069-9352088 | MsG0480018748.01.T01:CDS | 55.0% |
CTCCCGGACCTCGATTCTCA+AGG | - | Chr4:9352056-9352075 | None:intergenic | 60.0% | |
CTTCCGGAATGTTGAGGGGC+TGG | - | Chr4:9351642-9351661 | None:intergenic | 60.0% | |
! | AGGCGGACAATGGTGCCAAG+TGG | - | Chr4:9349878-9349897 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 9349740 | 9352101 | 9349740 | ID=MsG0480018748.01;Name=MsG0480018748.01 |
Chr4 | mRNA | 9349740 | 9352101 | 9349740 | ID=MsG0480018748.01.T01;Parent=MsG0480018748.01;Name=MsG0480018748.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|2|0|505 |
Chr4 | exon | 9349740 | 9350408 | 9349740 | ID=MsG0480018748.01.T01:exon:2598;Parent=MsG0480018748.01.T01 |
Chr4 | exon | 9351253 | 9352101 | 9351253 | ID=MsG0480018748.01.T01:exon:2599;Parent=MsG0480018748.01.T01 |
Chr4 | CDS | 9349740 | 9350408 | 9349740 | ID=MsG0480018748.01.T01:cds;Parent=MsG0480018748.01.T01 |
Chr4 | CDS | 9351253 | 9352101 | 9351253 | ID=MsG0480018748.01.T01:cds;Parent=MsG0480018748.01.T01 |
Gene Sequence |
Protein sequence |