Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018747.01.T01 | AES86950.1 | 76.145 | 524 | 85 | 7 | 1 | 508 | 1 | 500 | 0 | 766 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018747.01.T01 | G7JQ74 | 76.145 | 524 | 85 | 7 | 1 | 508 | 1 | 500 | 0.0 | 766 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018747.01.T01 | MTR_4g017410 | 76.145 | 524 | 85 | 7 | 1 | 508 | 1 | 500 | 0.0 | 766 |
MsG0480018747.01.T01 | MTR_4g017470 | 68.571 | 525 | 109 | 6 | 1 | 508 | 1 | 486 | 0.0 | 664 |
MsG0480018747.01.T01 | MTR_4g017440 | 67.515 | 511 | 150 | 6 | 1 | 498 | 1 | 508 | 0.0 | 663 |
MsG0480018747.01.T01 | MTR_4g017830 | 66.016 | 512 | 157 | 5 | 1 | 499 | 1 | 508 | 0.0 | 660 |
MsG0480018747.01.T01 | MTR_4g017550 | 73.362 | 458 | 106 | 6 | 41 | 489 | 20 | 470 | 0.0 | 655 |
MsG0480018747.01.T01 | MTR_4g017550 | 27.888 | 251 | 134 | 8 | 9 | 239 | 244 | 467 | 2.91e-13 | 72.4 |
MsG0480018747.01.T01 | MTR_4g019340 | 63.710 | 496 | 129 | 8 | 10 | 482 | 36 | 503 | 0.0 | 597 |
MsG0480018747.01.T01 | MTR_4g017610 | 60.941 | 489 | 176 | 7 | 1 | 488 | 1 | 475 | 0.0 | 574 |
MsG0480018747.01.T01 | MTR_4g019310 | 41.233 | 519 | 266 | 16 | 1 | 500 | 1 | 499 | 3.19e-111 | 339 |
MsG0480018747.01.T01 | MTR_7g066570 | 35.917 | 529 | 281 | 18 | 1 | 506 | 1 | 494 | 1.23e-81 | 265 |
MsG0480018747.01.T01 | MTR_7g066410 | 35.238 | 525 | 274 | 17 | 13 | 493 | 11 | 513 | 1.42e-75 | 247 |
MsG0480018747.01.T01 | MTR_7g066410 | 26.639 | 244 | 146 | 7 | 10 | 239 | 282 | 506 | 9.70e-12 | 67.8 |
MsG0480018747.01.T01 | MTR_7g058710 | 33.397 | 524 | 282 | 16 | 1 | 498 | 1 | 483 | 1.96e-75 | 246 |
MsG0480018747.01.T01 | MTR_7g066340 | 34.791 | 503 | 261 | 18 | 2 | 492 | 6 | 453 | 3.50e-75 | 245 |
MsG0480018747.01.T01 | MTR_7g066430 | 34.714 | 507 | 282 | 15 | 13 | 494 | 5 | 487 | 1.94e-73 | 241 |
MsG0480018747.01.T01 | MTR_7g066350 | 35.306 | 507 | 244 | 16 | 3 | 488 | 2 | 445 | 5.68e-73 | 239 |
MsG0480018747.01.T01 | MTR_7g066260 | 34.940 | 498 | 249 | 16 | 13 | 489 | 16 | 459 | 3.43e-72 | 238 |
MsG0480018747.01.T01 | MTR_7g066260 | 29.661 | 236 | 129 | 9 | 271 | 485 | 15 | 234 | 7.79e-13 | 70.9 |
MsG0480018747.01.T01 | MTR_7g012680 | 33.794 | 506 | 256 | 17 | 7 | 498 | 11 | 451 | 1.20e-67 | 224 |
MsG0480018747.01.T01 | MTR_7g063660 | 33.858 | 508 | 284 | 18 | 8 | 498 | 5 | 477 | 1.22e-64 | 217 |
MsG0480018747.01.T01 | MTR_7g063660 | 29.101 | 189 | 105 | 6 | 266 | 441 | 4 | 176 | 4.68e-13 | 71.6 |
MsG0480018747.01.T01 | MTR_1g041315 | 33.728 | 507 | 239 | 20 | 5 | 476 | 7 | 451 | 8.47e-63 | 213 |
MsG0480018747.01.T01 | MTR_7g066360 | 34.959 | 492 | 245 | 17 | 13 | 489 | 15 | 446 | 1.13e-61 | 209 |
MsG0480018747.01.T01 | MTR_7g063900 | 33.140 | 516 | 273 | 18 | 10 | 493 | 8 | 483 | 3.01e-61 | 209 |
MsG0480018747.01.T01 | MTR_7g062280 | 33.205 | 518 | 277 | 17 | 13 | 498 | 11 | 491 | 4.88e-60 | 206 |
MsG0480018747.01.T01 | MTR_7g066400 | 33.006 | 509 | 244 | 20 | 1 | 488 | 1 | 433 | 2.25e-59 | 202 |
MsG0480018747.01.T01 | MTR_7g063880 | 32.554 | 513 | 276 | 21 | 1 | 493 | 1 | 463 | 8.19e-58 | 199 |
MsG0480018747.01.T01 | MTR_7g062300 | 31.783 | 516 | 283 | 18 | 1 | 491 | 1 | 472 | 4.11e-57 | 197 |
MsG0480018747.01.T01 | MTR_7g066580 | 30.140 | 501 | 264 | 15 | 18 | 492 | 1 | 441 | 8.60e-55 | 190 |
MsG0480018747.01.T01 | MTR_7g066580 | 27.530 | 247 | 138 | 8 | 11 | 238 | 214 | 438 | 1.03e-11 | 67.4 |
MsG0480018747.01.T01 | MTR_7g063840 | 31.189 | 513 | 288 | 18 | 7 | 498 | 5 | 473 | 3.73e-54 | 189 |
MsG0480018747.01.T01 | MTR_7g063890 | 31.845 | 515 | 286 | 17 | 13 | 499 | 28 | 505 | 1.59e-52 | 186 |
MsG0480018747.01.T01 | MTR_7g063830 | 31.076 | 502 | 252 | 15 | 13 | 493 | 11 | 439 | 1.52e-51 | 182 |
MsG0480018747.01.T01 | MTR_7g063830 | 26.275 | 255 | 152 | 9 | 266 | 502 | 5 | 241 | 1.98e-11 | 66.6 |
MsG0480018747.01.T01 | MTR_7g066480 | 32.724 | 492 | 234 | 15 | 13 | 493 | 17 | 422 | 6.90e-51 | 179 |
MsG0480018747.01.T01 | MTR_7g066310 | 30.972 | 494 | 211 | 16 | 7 | 488 | 4 | 379 | 1.32e-50 | 178 |
MsG0480018747.01.T01 | MTR_7g063820 | 32.630 | 521 | 291 | 21 | 1 | 498 | 1 | 484 | 3.29e-50 | 179 |
MsG0480018747.01.T01 | MTR_7g066290 | 36.340 | 377 | 199 | 14 | 1 | 356 | 5 | 361 | 1.82e-49 | 176 |
MsG0480018747.01.T01 | MTR_7g063920 | 29.412 | 510 | 274 | 15 | 1 | 498 | 1 | 436 | 2.64e-48 | 173 |
MsG0480018747.01.T01 | MTR_7g063670 | 31.262 | 515 | 276 | 17 | 1 | 498 | 4 | 457 | 3.11e-48 | 173 |
MsG0480018747.01.T01 | MTR_3g007740 | 30.159 | 504 | 280 | 16 | 1 | 493 | 1 | 443 | 1.57e-46 | 168 |
MsG0480018747.01.T01 | MTR_7g066490 | 30.533 | 488 | 236 | 13 | 13 | 493 | 17 | 408 | 2.08e-43 | 159 |
MsG0480018747.01.T01 | MTR_2g029400 | 29.167 | 480 | 237 | 14 | 13 | 480 | 15 | 403 | 1.19e-42 | 157 |
MsG0480018747.01.T01 | MTR_4g019240 | 62.400 | 125 | 37 | 4 | 1 | 121 | 1 | 119 | 6.66e-42 | 148 |
MsG0480018747.01.T01 | MTR_4g019240 | 68.627 | 51 | 16 | 0 | 451 | 501 | 113 | 163 | 2.93e-13 | 68.6 |
MsG0480018747.01.T01 | MTR_3g065200 | 29.645 | 479 | 265 | 18 | 13 | 486 | 4 | 415 | 6.95e-41 | 153 |
MsG0480018747.01.T01 | MTR_7g058700 | 31.592 | 402 | 177 | 15 | 10 | 366 | 509 | 857 | 1.23e-38 | 150 |
MsG0480018747.01.T01 | MTR_7g066280 | 29.040 | 427 | 224 | 16 | 100 | 488 | 1 | 386 | 1.84e-33 | 131 |
MsG0480018747.01.T01 | MTR_1g014060 | 36.279 | 215 | 113 | 9 | 21 | 228 | 9 | 206 | 1.35e-28 | 117 |
MsG0480018747.01.T01 | MTR_1g014060 | 32.558 | 258 | 127 | 11 | 253 | 498 | 168 | 390 | 2.87e-14 | 75.1 |
MsG0480018747.01.T01 | MTR_7g066680 | 33.585 | 265 | 148 | 10 | 222 | 472 | 37 | 287 | 6.71e-24 | 103 |
MsG0480018747.01.T01 | MTR_8g445860 | 29.707 | 239 | 142 | 8 | 13 | 242 | 14 | 235 | 4.66e-19 | 87.0 |
MsG0480018747.01.T01 | MTR_8g445860 | 29.565 | 230 | 146 | 6 | 267 | 486 | 9 | 232 | 2.78e-18 | 84.7 |
MsG0480018747.01.T01 | MTR_7g063850 | 26.646 | 319 | 187 | 11 | 194 | 498 | 3 | 288 | 5.48e-19 | 87.8 |
MsG0480018747.01.T01 | MTR_1g115440 | 28.631 | 241 | 145 | 9 | 13 | 242 | 12 | 236 | 2.44e-18 | 84.7 |
MsG0480018747.01.T01 | MTR_1g115440 | 28.862 | 246 | 140 | 7 | 262 | 486 | 2 | 233 | 1.43e-17 | 82.4 |
MsG0480018747.01.T01 | MTR_7g062270 | 33.500 | 200 | 102 | 10 | 1 | 191 | 1 | 178 | 3.84e-18 | 86.7 |
MsG0480018747.01.T01 | MTR_8g023240 | 23.404 | 517 | 300 | 17 | 12 | 494 | 37 | 491 | 6.69e-18 | 87.0 |
MsG0480018747.01.T01 | MTR_7g100420 | 28.443 | 334 | 182 | 10 | 176 | 488 | 96 | 393 | 3.81e-17 | 84.0 |
MsG0480018747.01.T01 | MTR_0150s0010 | 29.644 | 253 | 149 | 10 | 1 | 242 | 1 | 235 | 9.36e-16 | 77.4 |
MsG0480018747.01.T01 | MTR_0150s0010 | 27.848 | 237 | 146 | 5 | 266 | 486 | 5 | 232 | 2.78e-15 | 75.9 |
MsG0480018747.01.T01 | MTR_4g019330 | 30.556 | 216 | 89 | 5 | 285 | 498 | 32 | 188 | 2.30e-15 | 75.1 |
MsG0480018747.01.T01 | MTR_1g115435 | 27.083 | 240 | 133 | 8 | 13 | 247 | 8 | 210 | 1.87e-14 | 73.2 |
MsG0480018747.01.T01 | MTR_1g115455 | 26.721 | 247 | 138 | 7 | 13 | 242 | 10 | 230 | 1.78e-13 | 70.5 |
MsG0480018747.01.T01 | MTR_1g115455 | 40.278 | 72 | 43 | 0 | 263 | 334 | 1 | 72 | 5.41e-12 | 66.2 |
MsG0480018747.01.T01 | MTR_1g115450 | 41.333 | 75 | 44 | 0 | 266 | 340 | 2 | 76 | 4.63e-13 | 67.0 |
MsG0480018747.01.T01 | MTR_1g115450 | 33.043 | 115 | 63 | 2 | 13 | 127 | 8 | 108 | 4.30e-11 | 61.2 |
MsG0480018747.01.T01 | MTR_6g006800 | 70.213 | 47 | 13 | 1 | 1 | 47 | 1 | 46 | 1.04e-12 | 63.5 |
MsG0480018747.01.T01 | MTR_8g445920 | 38.889 | 72 | 44 | 0 | 266 | 337 | 5 | 76 | 2.77e-12 | 63.9 |
MsG0480018747.01.T01 | MTR_8g044890 | 38.889 | 72 | 44 | 0 | 266 | 337 | 5 | 76 | 2.77e-12 | 63.9 |
MsG0480018747.01.T01 | MTR_0150s0030 | 40.000 | 75 | 45 | 0 | 266 | 340 | 3 | 77 | 5.98e-12 | 65.5 |
MsG0480018747.01.T01 | MTR_8g445910 | 41.667 | 72 | 42 | 0 | 266 | 337 | 3 | 74 | 4.12e-11 | 63.9 |
MsG0480018747.01.T01 | MTR_1g115470 | 40.845 | 71 | 42 | 0 | 267 | 337 | 2 | 72 | 5.83e-11 | 65.1 |
MsG0480018747.01.T01 | MTR_8g044880 | 41.667 | 72 | 42 | 0 | 266 | 337 | 3 | 74 | 5.88e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018747.01.T01 | AT5G01120 | 32.500 | 520 | 305 | 16 | 13 | 508 | 10 | 507 | 9.01e-72 | 237 |
MsG0480018747.01.T01 | AT5G43240 | 34.087 | 531 | 286 | 20 | 13 | 508 | 10 | 511 | 4.14e-70 | 233 |
MsG0480018747.01.T01 | AT5G43240 | 34.087 | 531 | 286 | 20 | 13 | 508 | 10 | 511 | 4.14e-70 | 233 |
MsG0480018747.01.T01 | AT5G43240 | 34.087 | 531 | 286 | 20 | 13 | 508 | 10 | 511 | 4.14e-70 | 233 |
MsG0480018747.01.T01 | AT5G01130 | 32.245 | 490 | 267 | 15 | 13 | 492 | 10 | 444 | 7.03e-61 | 207 |
MsG0480018747.01.T01 | AT5G01140 | 32.383 | 491 | 279 | 15 | 15 | 498 | 12 | 456 | 4.19e-60 | 205 |
MsG0480018747.01.T01 | AT5G01150 | 31.076 | 502 | 304 | 13 | 15 | 500 | 12 | 487 | 1.22e-59 | 205 |
MsG0480018747.01.T01 | AT3G09140 | 30.137 | 511 | 305 | 14 | 11 | 493 | 8 | 494 | 4.96e-56 | 195 |
MsG0480018747.01.T01 | AT3G09140 | 29.555 | 247 | 146 | 10 | 263 | 485 | 1 | 243 | 2.42e-15 | 79.0 |
MsG0480018747.01.T01 | AT3G09140 | 28.571 | 539 | 305 | 15 | 11 | 493 | 8 | 522 | 1.30e-50 | 181 |
MsG0480018747.01.T01 | AT3G09140 | 29.717 | 212 | 122 | 9 | 263 | 451 | 1 | 208 | 8.90e-12 | 67.8 |
MsG0480018747.01.T01 | AT5G37320 | 30.966 | 507 | 294 | 19 | 10 | 493 | 7 | 480 | 6.51e-50 | 178 |
MsG0480018747.01.T01 | AT3G09110 | 35.329 | 334 | 185 | 11 | 9 | 332 | 6 | 318 | 4.00e-48 | 170 |
MsG0480018747.01.T01 | AT3G09120 | 32.099 | 324 | 192 | 9 | 13 | 325 | 7 | 313 | 4.32e-44 | 158 |
MsG0480018747.01.T01 | AT5G43240 | 32.507 | 363 | 213 | 11 | 165 | 508 | 18 | 367 | 4.21e-40 | 149 |
Find 107 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATGCTTCACATGGATTTC+TGG | 0.119581 | 4:-9325202 | None:intergenic |
CATCATTTGAATTGAGATTT+TGG | 0.129092 | 4:-9325140 | None:intergenic |
CTTGCAGCTGTTGATGGAAT+TGG | 0.234153 | 4:+9325479 | MsG0480018747.01.T01:CDS |
AGAAAATGGATCATTGTTTC+TGG | 0.236079 | 4:+9325413 | MsG0480018747.01.T01:CDS |
GTCATTGTTGTTGTTATTCC+TGG | 0.237924 | 4:-9325061 | None:intergenic |
CAAGAGAATAATGCACAAAA+TGG | 0.267467 | 4:+9325378 | MsG0480018747.01.T01:CDS |
AGGTCGGTTATCTTTGTTCT+TGG | 0.278077 | 4:-9326472 | None:intergenic |
AGGAGTGATTTCTAAGTCTA+AGG | 0.286294 | 4:+9326896 | MsG0480018747.01.T01:CDS |
ACTACATATTACTATGGTAT+AGG | 0.294051 | 4:+9326825 | MsG0480018747.01.T01:CDS |
CACCAGTGACAACAGGAAAT+TGG | 0.303337 | 4:+9326530 | MsG0480018747.01.T01:CDS |
GCTGGTTTAGACAACTAAAT+TGG | 0.308407 | 4:-9326770 | None:intergenic |
TATTCCTGGTGGTGGCTAAA+AGG | 0.313041 | 4:-9325047 | None:intergenic |
ATCTCAATTCAAATGATGTT+TGG | 0.325115 | 4:+9325145 | MsG0480018747.01.T01:CDS |
GACTTACTTGCAGCTGTTGA+TGG | 0.329694 | 4:+9325473 | MsG0480018747.01.T01:CDS |
CCCTCAGAATCCAAGTTCTT+AGG | 0.332053 | 4:-9325354 | None:intergenic |
GGGGTCTTTGTAAGAGAAAA+TGG | 0.335839 | 4:+9325399 | MsG0480018747.01.T01:CDS |
GGAATTGGGGTATTCAGATT+TGG | 0.342273 | 4:+9325494 | MsG0480018747.01.T01:CDS |
CTACGTGAATACTCTGTCTT+AGG | 0.344373 | 4:-9326852 | None:intergenic |
GTGAAGAGAGCAGCATTATA+TGG | 0.358751 | 4:+9326999 | MsG0480018747.01.T01:CDS |
GTGGGTGGTGGTTGAACTTC+AGG | 0.360167 | 4:-9326804 | None:intergenic |
TTGCAGCTGTTGATGGAATT+GGG | 0.365599 | 4:+9325480 | MsG0480018747.01.T01:CDS |
CTACATATTACTATGGTATA+GGG | 0.380267 | 4:+9326826 | MsG0480018747.01.T01:CDS |
AATGCTTCACATGGATTTCT+GGG | 0.382524 | 4:-9325201 | None:intergenic |
AAGAGAATAATGCACAAAAT+GGG | 0.396091 | 4:+9325379 | MsG0480018747.01.T01:CDS |
AGCTTCCTTACCATGCCATT+AGG | 0.401925 | 4:+9326633 | MsG0480018747.01.T01:CDS |
ACACGTCCAGCAAAAGAATT+AGG | 0.402172 | 4:-9326678 | None:intergenic |
CCACCCACTACATATTACTA+TGG | 0.404760 | 4:+9326819 | MsG0480018747.01.T01:CDS |
CAAAGGCTCATCAGAGGTTA+AGG | 0.411865 | 4:-9326424 | None:intergenic |
CTTCAGGAATGTTGAGGGGC+TGG | 0.417714 | 4:-9326788 | None:intergenic |
TTCTTAGGCTGTCTATTAGT+GGG | 0.418576 | 4:-9325339 | None:intergenic |
TCTCGGTTCCATTGCAATCA+AGG | 0.422873 | 4:-9326940 | None:intergenic |
ACTGCTGATGCAAGTTGGTT+AGG | 0.427676 | 4:-9326492 | None:intergenic |
GTTCTTAGGCTGTCTATTAG+TGG | 0.429169 | 4:-9325340 | None:intergenic |
TTCAGATTTGGCTCAAATAG+AGG | 0.433676 | 4:+9325506 | MsG0480018747.01.T01:CDS |
AATTCCCCTCAAAATGTTAG+TGG | 0.442870 | 4:+9324927 | MsG0480018747.01.T01:CDS |
CTTGATCCGTTGAGGGATCT+CGG | 0.448216 | 4:-9326957 | None:intergenic |
GTACAAAAGTGTGGAGAACT+TGG | 0.451915 | 4:+9326710 | MsG0480018747.01.T01:CDS |
GGATCCGTTGTAAAGCTTCT+CGG | 0.455599 | 4:+9326654 | MsG0480018747.01.T01:CDS |
TGCCTTGCACCAGTGACAAC+AGG | 0.457008 | 4:+9326523 | MsG0480018747.01.T01:CDS |
ATGGTATTGATTCTGATTGT+TGG | 0.459184 | 4:-9325083 | None:intergenic |
CTGGTTTAGGCACACTCAAA+AGG | 0.467866 | 4:-9327282 | None:intergenic |
ATGTTTGTGTTACTCGATCC+TGG | 0.468869 | 4:+9326738 | MsG0480018747.01.T01:CDS |
TAATAGACAGCCTAAGAACT+TGG | 0.472478 | 4:+9325344 | MsG0480018747.01.T01:CDS |
AGCAAAATCCTTGATTGCAA+TGG | 0.473177 | 4:+9326932 | MsG0480018747.01.T01:CDS |
AACAGCATTTGTTTGCAGAC+AGG | 0.475302 | 4:-9325174 | None:intergenic |
ATCCAATTTCCTGTTGTCAC+TGG | 0.480035 | 4:-9326532 | None:intergenic |
AGAGCAGCATTATATGGTAT+AGG | 0.480188 | 4:+9327005 | MsG0480018747.01.T01:CDS |
TGGTGCCAAGTGGAAGAGAT+AGG | 0.487529 | 4:-9325017 | None:intergenic |
GGATCAAGAGATGATGCTAC+TGG | 0.488902 | 4:+9326972 | MsG0480018747.01.T01:CDS |
AGCTTCCTATCTCTTCCACT+TGG | 0.491188 | 4:+9325012 | MsG0480018747.01.T01:CDS |
ATCATCTCTTGATCCGTTGA+GGG | 0.492757 | 4:-9326964 | None:intergenic |
TTGATGTCAAGAATGCTTGA+AGG | 0.493162 | 4:-9327231 | None:intergenic |
AGCTTTACAACGGATCCTAA+TGG | 0.495250 | 4:-9326648 | None:intergenic |
GTTGTTGTTATTCCTGGTGG+TGG | 0.496331 | 4:-9325055 | None:intergenic |
GAAGTCAACAAAATCTCCAT+TGG | 0.498206 | 4:-9326604 | None:intergenic |
TAGCTTGCACCGTTATATAG+AGG | 0.502779 | 4:+9326872 | MsG0480018747.01.T01:CDS |
GAAAGTGTCAACAAAGTCCT+TGG | 0.507259 | 4:-9324986 | None:intergenic |
ATGAAAGAATCAGAAGAAAG+TGG | 0.508771 | 4:-9327047 | None:intergenic |
CAGAATCTTGATTGTACCTG+TGG | 0.516497 | 4:+9325312 | MsG0480018747.01.T01:CDS |
GCCTAAGAACTTGGATTCTG+AGG | 0.520425 | 4:+9325353 | MsG0480018747.01.T01:CDS |
TTGAACTTCAGGAATGTTGA+GGG | 0.531310 | 4:-9326793 | None:intergenic |
CTAAATTGGTGTGCTATACC+AGG | 0.534258 | 4:-9326756 | None:intergenic |
CTCTAACTGCTGATGCAAGT+TGG | 0.535856 | 4:-9326497 | None:intergenic |
AAGTAAGTCACAAACGAACT+TGG | 0.540077 | 4:-9325459 | None:intergenic |
TCAAGATTTACCTTGACTAG+TGG | 0.544138 | 4:+9327250 | MsG0480018747.01.T01:CDS |
CTTCAAGATCATCAAGAGGA+AGG | 0.549012 | 4:-9327091 | None:intergenic |
TTTCTGATGTTGTCAAGGAA+TGG | 0.556391 | 4:-9325102 | None:intergenic |
TTGTAGCTGTTCAGAAGCCA+TGG | 0.558598 | 4:-9324890 | None:intergenic |
GTTGAACTTCAGGAATGTTG+AGG | 0.565991 | 4:-9326794 | None:intergenic |
TTCCTGTTGTCACTGGTGCA+AGG | 0.566131 | 4:-9326525 | None:intergenic |
GGAGTGATTTCTAAGTCTAA+GGG | 0.566521 | 4:+9326897 | MsG0480018747.01.T01:CDS |
TCACTCCTCCCTCTATATAA+CGG | 0.567399 | 4:-9326881 | None:intergenic |
CTGATGCAAGTTGGTTAGGT+CGG | 0.567745 | 4:-9326488 | None:intergenic |
ATAATCTTTGCAGAAACCAA+TGG | 0.568343 | 4:+9326588 | MsG0480018747.01.T01:CDS |
TGGTAATTTGTACAAAAGTG+TGG | 0.569416 | 4:+9326701 | MsG0480018747.01.T01:CDS |
TCTTGATGATCTTGAAGTGA+AGG | 0.571298 | 4:+9327097 | MsG0480018747.01.T01:CDS |
CATCATCTCTTGATCCGTTG+AGG | 0.577105 | 4:-9326965 | None:intergenic |
GTCTTTAAGTCCACTAGTCA+AGG | 0.577600 | 4:-9327260 | None:intergenic |
CGGATCCTAATGGCATGGTA+AGG | 0.586168 | 4:-9326638 | None:intergenic |
AGAGGTTTCTGATGTTGTCA+AGG | 0.592804 | 4:-9325107 | None:intergenic |
TTCATGCACAATGCTTCACA+TGG | 0.593963 | 4:-9325210 | None:intergenic |
TAGTAATATGTAGTGGGTGG+TGG | 0.598894 | 4:-9326816 | None:intergenic |
ATTGTTGTTGTTATTCCTGG+TGG | 0.607529 | 4:-9325058 | None:intergenic |
AGCTTGCACCGTTATATAGA+GGG | 0.609591 | 4:+9326873 | MsG0480018747.01.T01:CDS |
AAATGTTAGTGGACAAACAA+AGG | 0.609948 | 4:+9324938 | MsG0480018747.01.T01:CDS |
ATACCATAGTAATATGTAGT+GGG | 0.610428 | 4:-9326822 | None:intergenic |
TGCAGCTGTTGATGGAATTG+GGG | 0.616569 | 4:+9325481 | MsG0480018747.01.T01:CDS |
CCTAAGAACTTGGATTCTGA+GGG | 0.620194 | 4:+9325354 | MsG0480018747.01.T01:CDS |
AGAGAATAATGCACAAAATG+GGG | 0.621524 | 4:+9325380 | MsG0480018747.01.T01:CDS |
ACAAAACATTGGCAAACAAG+AGG | 0.622350 | 4:+9325536 | MsG0480018747.01.T01:CDS |
GAGGAAGTCACACAAAACAT+TGG | 0.622642 | 4:+9325525 | MsG0480018747.01.T01:CDS |
TATACCATAGTAATATGTAG+TGG | 0.628329 | 4:-9326823 | None:intergenic |
TTCACTTCAAGATCATCAAG+AGG | 0.629431 | 4:-9327095 | None:intergenic |
AGGTTAAGGTATGCTTGAGG+AGG | 0.635555 | 4:-9326410 | None:intergenic |
GATAAGCATTGGTGAAGCTG+AGG | 0.638424 | 4:+9327121 | MsG0480018747.01.T01:CDS |
CCATAGTAATATGTAGTGGG+TGG | 0.647197 | 4:-9326819 | None:intergenic |
TACAACGGATCCTAATGGCA+TGG | 0.650564 | 4:-9326643 | None:intergenic |
GAAGTGAAGGTGATAAGCAT+TGG | 0.654807 | 4:+9327110 | MsG0480018747.01.T01:CDS |
ATTTGTCAAAGGCTCATCAG+AGG | 0.659166 | 4:-9326430 | None:intergenic |
CAGAGGTTAAGGTATGCTTG+AGG | 0.671381 | 4:-9326413 | None:intergenic |
ATGGAACCGAGATCCCTCAA+CGG | 0.675491 | 4:+9326951 | MsG0480018747.01.T01:CDS |
TTGCACCGTTATATAGAGGG+AGG | 0.682014 | 4:+9326876 | MsG0480018747.01.T01:CDS |
TGAACTTCAGGAATGTTGAG+GGG | 0.697523 | 4:-9326792 | None:intergenic |
AGGCGAACGATGGTGCCAAG+TGG | 0.699497 | 4:-9325027 | None:intergenic |
AGGTCCGAGAAGCTTTACAA+CGG | 0.701078 | 4:-9326658 | None:intergenic |
GGTGGCTAAAAGGCGAACGA+TGG | 0.723514 | 4:-9325037 | None:intergenic |
GATCGAGTAACACAAACATG+CGG | 0.761289 | 4:-9326734 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAGATCTATTATAGAA+AGG | - | Chr4:9326309-9326328 | None:intergenic | 15.0% |
!! | ACAAAAATAAAGAAATACTA+TGG | + | Chr4:9325802-9325821 | MsG0480018747.01.T01:intron | 15.0% |
!! | CAAAAATAAAGAAATACTAT+GGG | + | Chr4:9325803-9325822 | MsG0480018747.01.T01:intron | 15.0% |
!! | AATATCAAATAATAGTCGTA+TGG | - | Chr4:9325977-9325996 | None:intergenic | 20.0% |
!! | AATTAACAAATTCAATGCAA+TGG | - | Chr4:9325609-9325628 | None:intergenic | 20.0% |
!! | ATTAACAAATTCAATGCAAT+GGG | - | Chr4:9325608-9325627 | None:intergenic | 20.0% |
!! | TAATTAAAAAAATTGCATCC+TGG | + | Chr4:9326057-9326076 | MsG0480018747.01.T01:intron | 20.0% |
!! | TTGTTAATTTCACAATCATT+TGG | + | Chr4:9325620-9325639 | MsG0480018747.01.T01:intron | 20.0% |
!!! | AACTTTTAGTTGAAATCTAA+AGG | + | Chr4:9325881-9325900 | MsG0480018747.01.T01:intron | 20.0% |
!!! | TTTTTTTGTTAGAAAACATG+TGG | + | Chr4:9326220-9326239 | MsG0480018747.01.T01:intron | 20.0% |
! | AAGAGAATAATGCACAAAAT+GGG | + | Chr4:9325379-9325398 | MsG0480018747.01.T01:CDS | 25.0% |
! | ACAAGAAAAAGCAATACTAT+GGG | + | Chr4:9325846-9325865 | MsG0480018747.01.T01:intron | 25.0% |
! | ACTACATATTACTATGGTAT+AGG | + | Chr4:9326825-9326844 | MsG0480018747.01.T01:CDS | 25.0% |
! | ATACCATAGTAATATGTAGT+GGG | - | Chr4:9326825-9326844 | None:intergenic | 25.0% |
! | ATCTCAATTCAAATGATGTT+TGG | + | Chr4:9325145-9325164 | MsG0480018747.01.T01:CDS | 25.0% |
! | CATTTACCAAACATTCTTAT+CGG | - | Chr4:9325915-9325934 | None:intergenic | 25.0% |
! | CTACATATTACTATGGTATA+GGG | + | Chr4:9326826-9326845 | MsG0480018747.01.T01:CDS | 25.0% |
! | GCAAAAAATGTATTTGTCAA+AGG | - | Chr4:9326444-9326463 | None:intergenic | 25.0% |
! | TACAAGAAAAAGCAATACTA+TGG | + | Chr4:9325845-9325864 | MsG0480018747.01.T01:intron | 25.0% |
! | TATACCATAGTAATATGTAG+TGG | - | Chr4:9326826-9326845 | None:intergenic | 25.0% |
!! | ACTTTGAAAAAAGTTGATTC+TGG | - | Chr4:9327304-9327323 | None:intergenic | 25.0% |
!! | ATTTGAATTGAGATTTTGGA+CGG | - | Chr4:9325139-9325158 | None:intergenic | 25.0% |
!! | CATCATTTGAATTGAGATTT+TGG | - | Chr4:9325143-9325162 | None:intergenic | 25.0% |
!!! | AAAAAAGTTGATTCTGGTTT+AGG | - | Chr4:9327298-9327317 | None:intergenic | 25.0% |
!!! | AGTATTGCTTTTTCTTGTAT+TGG | - | Chr4:9325844-9325863 | None:intergenic | 25.0% |
!!! | GTATTGCTTTTTCTTGTATT+GGG | - | Chr4:9325843-9325862 | None:intergenic | 25.0% |
AGAAAATGGATCATTGTTTC+TGG | + | Chr4:9325413-9325432 | MsG0480018747.01.T01:CDS | 30.0% | |
AGAGAATAATGCACAAAATG+GGG | + | Chr4:9325380-9325399 | MsG0480018747.01.T01:CDS | 30.0% | |
ATAATCTTTGCAGAAACCAA+TGG | + | Chr4:9326588-9326607 | MsG0480018747.01.T01:CDS | 30.0% | |
ATGAAAGAATCAGAAGAAAG+TGG | - | Chr4:9327050-9327069 | None:intergenic | 30.0% | |
CAAGAGAATAATGCACAAAA+TGG | + | Chr4:9325378-9325397 | MsG0480018747.01.T01:CDS | 30.0% | |
CACACAAAAAACTTACTTGA+TGG | - | Chr4:9325264-9325283 | None:intergenic | 30.0% | |
GTGAATAAGCAGTAAATTCA+AGG | - | Chr4:9325747-9325766 | None:intergenic | 30.0% | |
TACTGCTTATTCACCTTAAA+GGG | + | Chr4:9325753-9325772 | MsG0480018747.01.T01:intron | 30.0% | |
TTACTGCTTATTCACCTTAA+AGG | + | Chr4:9325752-9325771 | MsG0480018747.01.T01:intron | 30.0% | |
TTAGTCTCTTTGATTCACTT+TGG | + | Chr4:9327186-9327205 | MsG0480018747.01.T01:intron | 30.0% | |
! | AAATGTTAGTGGACAAACAA+AGG | + | Chr4:9324938-9324957 | MsG0480018747.01.T01:CDS | 30.0% |
! | ACAAAGTATGAGAGAGTATA+AGG | + | Chr4:9326024-9326043 | MsG0480018747.01.T01:intron | 30.0% |
! | ATTTTTGTCAATTAGCCAAG+TGG | - | Chr4:9325790-9325809 | None:intergenic | 30.0% |
! | TGGTAATTTGTACAAAAGTG+TGG | + | Chr4:9326701-9326720 | MsG0480018747.01.T01:CDS | 30.0% |
! | TTTGTCCACTAACATTTTGA+GGG | - | Chr4:9324935-9324954 | None:intergenic | 30.0% |
!! | AAGAAAGTGGTTTTACTCTT+AGG | - | Chr4:9327037-9327056 | None:intergenic | 30.0% |
!! | ATGGTATTGATTCTGATTGT+TGG | - | Chr4:9325086-9325105 | None:intergenic | 30.0% |
!!! | AAGGAACAAAGTTGTTTTTG+TGG | + | Chr4:9324957-9324976 | MsG0480018747.01.T01:CDS | 30.0% |
AACACCACCATATTAGAGTA+AGG | + | Chr4:9326166-9326185 | MsG0480018747.01.T01:intron | 35.0% | |
AAGTAAGTCACAAACGAACT+TGG | - | Chr4:9325462-9325481 | None:intergenic | 35.0% | |
AATGCTTCACATGGATTTCT+GGG | - | Chr4:9325204-9325223 | None:intergenic | 35.0% | |
AATTCCCCTCAAAATGTTAG+TGG | + | Chr4:9324927-9324946 | MsG0480018747.01.T01:CDS | 35.0% | |
ACAAAACATTGGCAAACAAG+AGG | + | Chr4:9325536-9325555 | MsG0480018747.01.T01:CDS | 35.0% | |
AGAGCAGCATTATATGGTAT+AGG | + | Chr4:9327005-9327024 | MsG0480018747.01.T01:CDS | 35.0% | |
AGCAAAATCCTTGATTGCAA+TGG | + | Chr4:9326932-9326951 | MsG0480018747.01.T01:CDS | 35.0% | |
AGGAGTGATTTCTAAGTCTA+AGG | + | Chr4:9326896-9326915 | MsG0480018747.01.T01:CDS | 35.0% | |
CTAGTGACCTTACTCTAATA+TGG | - | Chr4:9326176-9326195 | None:intergenic | 35.0% | |
GAAGTCAACAAAATCTCCAT+TGG | - | Chr4:9326607-9326626 | None:intergenic | 35.0% | |
GGAGTGATTTCTAAGTCTAA+GGG | + | Chr4:9326897-9326916 | MsG0480018747.01.T01:CDS | 35.0% | |
TAATAGACAGCCTAAGAACT+TGG | + | Chr4:9325344-9325363 | MsG0480018747.01.T01:CDS | 35.0% | |
TAGAAAACATGTGGTTTCAG+CGG | + | Chr4:9326229-9326248 | MsG0480018747.01.T01:intron | 35.0% | |
TCAAGATTTACCTTGACTAG+TGG | + | Chr4:9327250-9327269 | MsG0480018747.01.T01:CDS | 35.0% | |
TTCACTTCAAGATCATCAAG+AGG | - | Chr4:9327098-9327117 | None:intergenic | 35.0% | |
TTCTTAGGCTGTCTATTAGT+GGG | - | Chr4:9325342-9325361 | None:intergenic | 35.0% | |
TTGAACTTCAGGAATGTTGA+GGG | - | Chr4:9326796-9326815 | None:intergenic | 35.0% | |
TTGATGTCAAGAATGCTTGA+AGG | - | Chr4:9327234-9327253 | None:intergenic | 35.0% | |
TTTCTGATGTTGTCAAGGAA+TGG | - | Chr4:9325105-9325124 | None:intergenic | 35.0% | |
! | AATTGAGATTTTGGACGGTA+CGG | - | Chr4:9325134-9325153 | None:intergenic | 35.0% |
! | ATTGTTGTTGTTATTCCTGG+TGG | - | Chr4:9325061-9325080 | None:intergenic | 35.0% |
! | GCTGGTTTAGACAACTAAAT+TGG | - | Chr4:9326773-9326792 | None:intergenic | 35.0% |
! | GTCATTGTTGTTGTTATTCC+TGG | - | Chr4:9325064-9325083 | None:intergenic | 35.0% |
! | GTTTGTCCACTAACATTTTG+AGG | - | Chr4:9324936-9324955 | None:intergenic | 35.0% |
! | TCTTGATGATCTTGAAGTGA+AGG | + | Chr4:9327097-9327116 | MsG0480018747.01.T01:CDS | 35.0% |
! | TGATCACAACTTAGTTGGTA+GGG | + | Chr4:9325685-9325704 | MsG0480018747.01.T01:intron | 35.0% |
! | TTCAGATTTGGCTCAAATAG+AGG | + | Chr4:9325506-9325525 | MsG0480018747.01.T01:CDS | 35.0% |
! | TTGTCCACTAACATTTTGAG+GGG | - | Chr4:9324934-9324953 | None:intergenic | 35.0% |
!! | TAAGCACCGATAAGAATGTT+TGG | + | Chr4:9325906-9325925 | MsG0480018747.01.T01:intron | 35.0% |
AAAAATTGCATCCTGGCACA+AGG | + | Chr4:9326064-9326083 | MsG0480018747.01.T01:intron | 40.0% | |
AACAGCATTTGTTTGCAGAC+AGG | - | Chr4:9325177-9325196 | None:intergenic | 40.0% | |
ACACGTCCAGCAAAAGAATT+AGG | - | Chr4:9326681-9326700 | None:intergenic | 40.0% | |
AGAGGTTTCTGATGTTGTCA+AGG | - | Chr4:9325110-9325129 | None:intergenic | 40.0% | |
AGCTTGCACCGTTATATAGA+GGG | + | Chr4:9326873-9326892 | MsG0480018747.01.T01:CDS | 40.0% | |
AGCTTTACAACGGATCCTAA+TGG | - | Chr4:9326651-9326670 | None:intergenic | 40.0% | |
AGGTCGGTTATCTTTGTTCT+TGG | - | Chr4:9326475-9326494 | None:intergenic | 40.0% | |
ATCATCTCTTGATCCGTTGA+GGG | - | Chr4:9326967-9326986 | None:intergenic | 40.0% | |
ATCCAATTTCCTGTTGTCAC+TGG | - | Chr4:9326535-9326554 | None:intergenic | 40.0% | |
ATTCACTTTGGTTGTTGTGC+AGG | + | Chr4:9327198-9327217 | MsG0480018747.01.T01:intron | 40.0% | |
ATTTGTCAAAGGCTCATCAG+AGG | - | Chr4:9326433-9326452 | None:intergenic | 40.0% | |
CAAGGTTCAAACACCAACTA+CGG | - | Chr4:9325729-9325748 | None:intergenic | 40.0% | |
CAATGCTTCACATGGATTTC+TGG | - | Chr4:9325205-9325224 | None:intergenic | 40.0% | |
CAGAATCTTGATTGTACCTG+TGG | + | Chr4:9325312-9325331 | MsG0480018747.01.T01:CDS | 40.0% | |
CCACCCACTACATATTACTA+TGG | + | Chr4:9326819-9326838 | MsG0480018747.01.T01:CDS | 40.0% | |
CCTAAGAACTTGGATTCTGA+GGG | + | Chr4:9325354-9325373 | MsG0480018747.01.T01:CDS | 40.0% | |
CTAAATTGGTGTGCTATACC+AGG | - | Chr4:9326759-9326778 | None:intergenic | 40.0% | |
CTACGTGAATACTCTGTCTT+AGG | - | Chr4:9326855-9326874 | None:intergenic | 40.0% | |
CTCTGTGATCACAACTTAGT+TGG | + | Chr4:9325680-9325699 | MsG0480018747.01.T01:intron | 40.0% | |
CTTCAAGATCATCAAGAGGA+AGG | - | Chr4:9327094-9327113 | None:intergenic | 40.0% | |
GAAGTGAAGGTGATAAGCAT+TGG | + | Chr4:9327110-9327129 | MsG0480018747.01.T01:CDS | 40.0% | |
GAGGAAGTCACACAAAACAT+TGG | + | Chr4:9325525-9325544 | MsG0480018747.01.T01:CDS | 40.0% | |
GATCGAGTAACACAAACATG+CGG | - | Chr4:9326737-9326756 | None:intergenic | 40.0% | |
GGGGTCTTTGTAAGAGAAAA+TGG | + | Chr4:9325399-9325418 | MsG0480018747.01.T01:CDS | 40.0% | |
GTCTTTAAGTCCACTAGTCA+AGG | - | Chr4:9327263-9327282 | None:intergenic | 40.0% | |
GTGAAGAGAGCAGCATTATA+TGG | + | Chr4:9326999-9327018 | MsG0480018747.01.T01:CDS | 40.0% | |
GTGACCTTACTCTAATATGG+TGG | - | Chr4:9326173-9326192 | None:intergenic | 40.0% | |
GTGATCACAACTTAGTTGGT+AGG | + | Chr4:9325684-9325703 | MsG0480018747.01.T01:intron | 40.0% | |
GTTCTTAGGCTGTCTATTAG+TGG | - | Chr4:9325343-9325362 | None:intergenic | 40.0% | |
GTTGAACTTCAGGAATGTTG+AGG | - | Chr4:9326797-9326816 | None:intergenic | 40.0% | |
TCACTCCTCCCTCTATATAA+CGG | - | Chr4:9326884-9326903 | None:intergenic | 40.0% | |
TGAACTTCAGGAATGTTGAG+GGG | - | Chr4:9326795-9326814 | None:intergenic | 40.0% | |
TTCATGCACAATGCTTCACA+TGG | - | Chr4:9325213-9325232 | None:intergenic | 40.0% | |
! | AATTCTTTTGCTGGACGTGT+TGG | + | Chr4:9326681-9326700 | MsG0480018747.01.T01:CDS | 40.0% |
! | ATGTTTGTGTTACTCGATCC+TGG | + | Chr4:9326738-9326757 | MsG0480018747.01.T01:CDS | 40.0% |
! | CCATAGTAATATGTAGTGGG+TGG | - | Chr4:9326822-9326841 | None:intergenic | 40.0% |
! | GGAATTGGGGTATTCAGATT+TGG | + | Chr4:9325494-9325513 | MsG0480018747.01.T01:CDS | 40.0% |
! | GTACAAAAGTGTGGAGAACT+TGG | + | Chr4:9326710-9326729 | MsG0480018747.01.T01:CDS | 40.0% |
! | TAGCTTGCACCGTTATATAG+AGG | + | Chr4:9326872-9326891 | MsG0480018747.01.T01:CDS | 40.0% |
! | TTGCAGCTGTTGATGGAATT+GGG | + | Chr4:9325480-9325499 | MsG0480018747.01.T01:CDS | 40.0% |
!! | GAAAGTGTCAACAAAGTCCT+TGG | - | Chr4:9324989-9325008 | None:intergenic | 40.0% |
!! | TAGTAATATGTAGTGGGTGG+TGG | - | Chr4:9326819-9326838 | None:intergenic | 40.0% |
!! | TGTTTTTGTGGAAGCAACCA+AGG | + | Chr4:9324969-9324988 | MsG0480018747.01.T01:CDS | 40.0% |
!!! | TCTATTAGTGGGTTTTCCAC+AGG | - | Chr4:9325331-9325350 | None:intergenic | 40.0% |
AAGGAAATCCATCGTAACCC+TGG | - | Chr4:9326290-9326309 | None:intergenic | 45.0% | |
AGCTTCCTATCTCTTCCACT+TGG | + | Chr4:9325012-9325031 | MsG0480018747.01.T01:CDS | 45.0% | |
AGCTTCCTTACCATGCCATT+AGG | + | Chr4:9326633-9326652 | MsG0480018747.01.T01:CDS | 45.0% | |
AGGTCCGAGAAGCTTTACAA+CGG | - | Chr4:9326661-9326680 | None:intergenic | 45.0% | |
AGGTTAAGGTATGCTTGAGG+AGG | - | Chr4:9326413-9326432 | None:intergenic | 45.0% | |
CAAAGGCTCATCAGAGGTTA+AGG | - | Chr4:9326427-9326446 | None:intergenic | 45.0% | |
CACCAGTGACAACAGGAAAT+TGG | + | Chr4:9326530-9326549 | MsG0480018747.01.T01:CDS | 45.0% | |
CAGAGGTTAAGGTATGCTTG+AGG | - | Chr4:9326416-9326435 | None:intergenic | 45.0% | |
CATCATCTCTTGATCCGTTG+AGG | - | Chr4:9326968-9326987 | None:intergenic | 45.0% | |
CCCTCAGAATCCAAGTTCTT+AGG | - | Chr4:9325357-9325376 | None:intergenic | 45.0% | |
CTCTAACTGCTGATGCAAGT+TGG | - | Chr4:9326500-9326519 | None:intergenic | 45.0% | |
CTGGTTTAGGCACACTCAAA+AGG | - | Chr4:9327285-9327304 | None:intergenic | 45.0% | |
GACTTACTTGCAGCTGTTGA+TGG | + | Chr4:9325473-9325492 | MsG0480018747.01.T01:CDS | 45.0% | |
GCCTAAGAACTTGGATTCTG+AGG | + | Chr4:9325353-9325372 | MsG0480018747.01.T01:CDS | 45.0% | |
GGATCAAGAGATGATGCTAC+TGG | + | Chr4:9326972-9326991 | MsG0480018747.01.T01:CDS | 45.0% | |
GGATCCGTTGTAAAGCTTCT+CGG | + | Chr4:9326654-9326673 | MsG0480018747.01.T01:CDS | 45.0% | |
TACAACGGATCCTAATGGCA+TGG | - | Chr4:9326646-9326665 | None:intergenic | 45.0% | |
TCTCGGTTCCATTGCAATCA+AGG | - | Chr4:9326943-9326962 | None:intergenic | 45.0% | |
TTGCACCGTTATATAGAGGG+AGG | + | Chr4:9326876-9326895 | MsG0480018747.01.T01:CDS | 45.0% | |
TTGGTGAAGCTGAGGTAATG+TGG | + | Chr4:9327129-9327148 | MsG0480018747.01.T01:intron | 45.0% | |
! | ACTGAAGCATCTCTTCTCAG+AGG | + | Chr4:9326254-9326273 | MsG0480018747.01.T01:intron | 45.0% |
! | CTCGGACCTAATTCTTTTGC+TGG | + | Chr4:9326672-9326691 | MsG0480018747.01.T01:CDS | 45.0% |
! | CTTGCAGCTGTTGATGGAAT+TGG | + | Chr4:9325479-9325498 | MsG0480018747.01.T01:CDS | 45.0% |
! | GTTGTTGTTATTCCTGGTGG+TGG | - | Chr4:9325058-9325077 | None:intergenic | 45.0% |
! | TGCAGCTGTTGATGGAATTG+GGG | + | Chr4:9325481-9325500 | MsG0480018747.01.T01:CDS | 45.0% |
!! | ACTGCTGATGCAAGTTGGTT+AGG | - | Chr4:9326495-9326514 | None:intergenic | 45.0% |
!! | CTGATGCAAGTTGGTTAGGT+CGG | - | Chr4:9326491-9326510 | None:intergenic | 45.0% |
!! | GATAAGCATTGGTGAAGCTG+AGG | + | Chr4:9327121-9327140 | MsG0480018747.01.T01:CDS | 45.0% |
!! | TATTCCTGGTGGTGGCTAAA+AGG | - | Chr4:9325050-9325069 | None:intergenic | 45.0% |
!!! | TATTATTTGATATTTTATAA+TGG | + | Chr4:9325983-9326002 | MsG0480018747.01.T01:intron | 5.0% |
AATCCATCGTAACCCTGGAG+TGG | - | Chr4:9326285-9326304 | None:intergenic | 50.0% | |
ATGGAACCGAGATCCCTCAA+CGG | + | Chr4:9326951-9326970 | MsG0480018747.01.T01:CDS | 50.0% | |
CGGATCCTAATGGCATGGTA+AGG | - | Chr4:9326641-9326660 | None:intergenic | 50.0% | |
CTTGATCCGTTGAGGGATCT+CGG | - | Chr4:9326960-9326979 | None:intergenic | 50.0% | |
GCATAGCAACATGCCGTAGT+TGG | + | Chr4:9325713-9325732 | MsG0480018747.01.T01:intron | 50.0% | |
GGCTAGAGTCTCACCCTTTA+AGG | - | Chr4:9325769-9325788 | None:intergenic | 50.0% | |
TCAGAGGAACTTCCACTCCA+GGG | + | Chr4:9326270-9326289 | MsG0480018747.01.T01:intron | 50.0% | |
TTCCTGTTGTCACTGGTGCA+AGG | - | Chr4:9326528-9326547 | None:intergenic | 50.0% | |
! | GATTTTGGACGGTACGGTAG+AGG | - | Chr4:9325128-9325147 | None:intergenic | 50.0% |
! | TGGTGCCAAGTGGAAGAGAT+AGG | - | Chr4:9325020-9325039 | None:intergenic | 50.0% |
AGGGTGAGACTCTAGCCACT+TGG | + | Chr4:9325772-9325791 | MsG0480018747.01.T01:intron | 55.0% | |
ATCCTGGCACAAGGTGTGCA+AGG | + | Chr4:9326073-9326092 | MsG0480018747.01.T01:intron | 55.0% | |
ATCCTTGCACACCTTGTGCC+AGG | - | Chr4:9326078-9326097 | None:intergenic | 55.0% | |
CTCAGAGGAACTTCCACTCC+AGG | + | Chr4:9326269-9326288 | MsG0480018747.01.T01:intron | 55.0% | |
CTTCAGGAATGTTGAGGGGC+TGG | - | Chr4:9326791-9326810 | None:intergenic | 55.0% | |
CTTCCACTCCAGGGTTACGA+TGG | + | Chr4:9326279-9326298 | MsG0480018747.01.T01:intron | 55.0% | |
GGTGGCTAAAAGGCGAACGA+TGG | - | Chr4:9325040-9325059 | None:intergenic | 55.0% | |
TGCCTTGCACCAGTGACAAC+AGG | + | Chr4:9326523-9326542 | MsG0480018747.01.T01:CDS | 55.0% | |
! | GTGGGTGGTGGTTGAACTTC+AGG | - | Chr4:9326807-9326826 | None:intergenic | 55.0% |
! | TTCGCCTTTTAGCCACCACC+AGG | + | Chr4:9325043-9325062 | MsG0480018747.01.T01:CDS | 55.0% |
! | AGGCGAACGATGGTGCCAAG+TGG | - | Chr4:9325030-9325049 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 9324892 | 9327339 | 9324892 | ID=MsG0480018747.01;Name=MsG0480018747.01 |
Chr4 | mRNA | 9324892 | 9327339 | 9324892 | ID=MsG0480018747.01.T01;Parent=MsG0480018747.01;Name=MsG0480018747.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|0.5|0.66|3|0|508 |
Chr4 | exon | 9324892 | 9325557 | 9324892 | ID=MsG0480018747.01.T01:exon:2587;Parent=MsG0480018747.01.T01 |
Chr4 | exon | 9326402 | 9327142 | 9326402 | ID=MsG0480018747.01.T01:exon:2588;Parent=MsG0480018747.01.T01 |
Chr4 | exon | 9327220 | 9327339 | 9327220 | ID=MsG0480018747.01.T01:exon:2589;Parent=MsG0480018747.01.T01 |
Chr4 | CDS | 9324892 | 9325557 | 9324892 | ID=MsG0480018747.01.T01:cds;Parent=MsG0480018747.01.T01 |
Chr4 | CDS | 9326402 | 9327142 | 9326402 | ID=MsG0480018747.01.T01:cds;Parent=MsG0480018747.01.T01 |
Chr4 | CDS | 9327220 | 9327339 | 9327220 | ID=MsG0480018747.01.T01:cds;Parent=MsG0480018747.01.T01 |
Gene Sequence |
Protein sequence |