Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039010.01.T01 | XP_013449064.1 | 82.808 | 349 | 59 | 1 | 1 | 348 | 106 | 454 | 0 | 576 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039010.01.T01 | A0A072U0X9 | 82.808 | 349 | 59 | 1 | 1 | 348 | 106 | 454 | 0.0 | 576 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039010.01.T01 | MTR_7g066340 | 82.808 | 349 | 59 | 1 | 1 | 348 | 106 | 454 | 0.0 | 576 |
| MsG0780039010.01.T01 | MTR_7g066280 | 67.337 | 398 | 58 | 2 | 1 | 348 | 16 | 391 | 6.86e-179 | 502 |
| MsG0780039010.01.T01 | MTR_7g066310 | 72.989 | 348 | 30 | 3 | 1 | 348 | 101 | 384 | 1.01e-170 | 481 |
| MsG0780039010.01.T01 | MTR_7g066350 | 64.672 | 351 | 110 | 6 | 1 | 344 | 103 | 446 | 1.04e-148 | 427 |
| MsG0780039010.01.T01 | MTR_1g041315 | 63.218 | 348 | 107 | 6 | 1 | 331 | 108 | 451 | 2.02e-139 | 405 |
| MsG0780039010.01.T01 | MTR_7g066400 | 56.787 | 361 | 123 | 7 | 1 | 344 | 90 | 434 | 7.98e-127 | 371 |
| MsG0780039010.01.T01 | MTR_7g066260 | 54.596 | 359 | 148 | 7 | 1 | 348 | 109 | 463 | 1.87e-116 | 346 |
| MsG0780039010.01.T01 | MTR_7g066570 | 53.003 | 383 | 134 | 8 | 1 | 347 | 108 | 480 | 1.15e-112 | 339 |
| MsG0780039010.01.T01 | MTR_7g066360 | 51.532 | 359 | 147 | 10 | 1 | 348 | 108 | 450 | 5.36e-99 | 301 |
| MsG0780039010.01.T01 | MTR_7g066290 | 52.089 | 359 | 128 | 11 | 1 | 348 | 109 | 434 | 6.54e-98 | 297 |
| MsG0780039010.01.T01 | MTR_7g058710 | 46.907 | 388 | 161 | 9 | 1 | 347 | 94 | 477 | 9.88e-94 | 288 |
| MsG0780039010.01.T01 | MTR_7g012680 | 47.945 | 365 | 145 | 9 | 1 | 347 | 108 | 445 | 1.10e-86 | 268 |
| MsG0780039010.01.T01 | MTR_7g058700 | 44.536 | 366 | 141 | 8 | 1 | 347 | 599 | 921 | 5.59e-79 | 259 |
| MsG0780039010.01.T01 | MTR_7g066580 | 41.562 | 397 | 138 | 13 | 1 | 347 | 89 | 441 | 7.71e-77 | 243 |
| MsG0780039010.01.T01 | MTR_7g066430 | 38.363 | 391 | 188 | 11 | 4 | 347 | 101 | 485 | 1.84e-70 | 228 |
| MsG0780039010.01.T01 | MTR_7g066680 | 46.154 | 299 | 98 | 5 | 109 | 344 | 37 | 335 | 4.11e-68 | 218 |
| MsG0780039010.01.T01 | MTR_7g066410 | 36.779 | 416 | 187 | 12 | 1 | 347 | 104 | 512 | 1.12e-66 | 219 |
| MsG0780039010.01.T01 | MTR_7g066480 | 35.393 | 356 | 177 | 8 | 1 | 347 | 110 | 421 | 3.65e-58 | 194 |
| MsG0780039010.01.T01 | MTR_2g029400 | 42.345 | 307 | 116 | 9 | 64 | 335 | 123 | 403 | 5.32e-58 | 193 |
| MsG0780039010.01.T01 | MTR_7g062300 | 35.467 | 375 | 199 | 12 | 1 | 343 | 106 | 469 | 3.44e-56 | 190 |
| MsG0780039010.01.T01 | MTR_7g062280 | 33.846 | 390 | 199 | 11 | 1 | 343 | 104 | 481 | 3.76e-55 | 188 |
| MsG0780039010.01.T01 | MTR_7g063660 | 33.770 | 382 | 205 | 11 | 1 | 347 | 103 | 471 | 3.51e-54 | 185 |
| MsG0780039010.01.T01 | MTR_7g066490 | 36.000 | 350 | 171 | 9 | 1 | 348 | 110 | 408 | 2.68e-53 | 181 |
| MsG0780039010.01.T01 | MTR_7g063820 | 34.726 | 383 | 203 | 11 | 1 | 345 | 103 | 476 | 6.12e-52 | 179 |
| MsG0780039010.01.T01 | MTR_7g063900 | 36.154 | 390 | 191 | 11 | 1 | 345 | 104 | 480 | 1.44e-50 | 176 |
| MsG0780039010.01.T01 | MTR_3g065200 | 35.326 | 368 | 158 | 13 | 1 | 334 | 87 | 408 | 2.04e-50 | 174 |
| MsG0780039010.01.T01 | MTR_7g063880 | 34.301 | 379 | 198 | 15 | 1 | 348 | 105 | 463 | 4.18e-50 | 174 |
| MsG0780039010.01.T01 | MTR_7g063920 | 35.331 | 317 | 170 | 7 | 57 | 347 | 123 | 430 | 4.25e-50 | 173 |
| MsG0780039010.01.T01 | MTR_7g063920 | 29.064 | 203 | 109 | 9 | 154 | 340 | 7 | 190 | 4.49e-11 | 64.3 |
| MsG0780039010.01.T01 | MTR_3g007740 | 34.426 | 366 | 207 | 11 | 1 | 347 | 91 | 442 | 8.67e-50 | 172 |
| MsG0780039010.01.T01 | MTR_7g063830 | 34.530 | 362 | 195 | 10 | 1 | 347 | 104 | 438 | 1.94e-48 | 169 |
| MsG0780039010.01.T01 | MTR_4g019340 | 34.771 | 371 | 192 | 11 | 3 | 336 | 145 | 502 | 9.30e-48 | 168 |
| MsG0780039010.01.T01 | MTR_7g063840 | 33.333 | 378 | 199 | 13 | 1 | 343 | 104 | 463 | 4.27e-46 | 163 |
| MsG0780039010.01.T01 | MTR_4g019310 | 30.946 | 391 | 208 | 13 | 1 | 343 | 110 | 486 | 4.28e-46 | 164 |
| MsG0780039010.01.T01 | MTR_4g017440 | 32.487 | 394 | 198 | 11 | 3 | 344 | 122 | 499 | 2.27e-45 | 162 |
| MsG0780039010.01.T01 | MTR_7g063890 | 34.783 | 391 | 198 | 12 | 1 | 347 | 121 | 498 | 4.10e-45 | 161 |
| MsG0780039010.01.T01 | MTR_7g063890 | 24.658 | 219 | 134 | 5 | 153 | 340 | 23 | 241 | 2.15e-11 | 65.1 |
| MsG0780039010.01.T01 | MTR_4g017830 | 32.170 | 401 | 203 | 13 | 3 | 347 | 114 | 501 | 1.78e-44 | 160 |
| MsG0780039010.01.T01 | MTR_7g066390 | 52.318 | 151 | 44 | 1 | 198 | 348 | 1 | 123 | 4.01e-42 | 144 |
| MsG0780039010.01.T01 | MTR_7g063670 | 30.833 | 360 | 227 | 7 | 1 | 345 | 97 | 449 | 1.58e-40 | 148 |
| MsG0780039010.01.T01 | MTR_4g017610 | 31.675 | 382 | 203 | 14 | 1 | 344 | 115 | 476 | 1.88e-40 | 148 |
| MsG0780039010.01.T01 | MTR_4g017410 | 30.848 | 389 | 198 | 13 | 3 | 343 | 115 | 480 | 3.31e-39 | 145 |
| MsG0780039010.01.T01 | MTR_4g017470 | 32.544 | 338 | 170 | 9 | 58 | 343 | 135 | 466 | 3.85e-36 | 137 |
| MsG0780039010.01.T01 | MTR_4g017470 | 28.372 | 215 | 118 | 7 | 148 | 340 | 1 | 201 | 5.99e-13 | 70.1 |
| MsG0780039010.01.T01 | MTR_1g014060 | 45.714 | 175 | 81 | 3 | 187 | 347 | 210 | 384 | 8.78e-34 | 129 |
| MsG0780039010.01.T01 | MTR_1g014060 | 49.254 | 134 | 62 | 5 | 1 | 132 | 94 | 223 | 8.27e-26 | 107 |
| MsG0780039010.01.T01 | MTR_4g017550 | 29.471 | 397 | 198 | 15 | 7 | 343 | 95 | 469 | 1.51e-32 | 127 |
| MsG0780039010.01.T01 | MTR_7g063720 | 33.180 | 217 | 118 | 3 | 151 | 347 | 17 | 226 | 2.74e-32 | 121 |
| MsG0780039010.01.T01 | MTR_7g100420 | 31.138 | 334 | 175 | 11 | 50 | 347 | 83 | 397 | 1.21e-24 | 103 |
| MsG0780039010.01.T01 | MTR_8g023240 | 27.027 | 222 | 142 | 8 | 8 | 220 | 125 | 335 | 1.63e-16 | 80.9 |
| MsG0780039010.01.T01 | MTR_4g019330 | 35.057 | 174 | 80 | 7 | 171 | 341 | 32 | 175 | 6.28e-16 | 75.5 |
| MsG0780039010.01.T01 | MTR_7g063690 | 30.168 | 179 | 109 | 5 | 7 | 184 | 59 | 222 | 2.29e-15 | 75.1 |
| MsG0780039010.01.T01 | MTR_7g063760 | 47.619 | 63 | 32 | 1 | 284 | 345 | 3 | 65 | 8.54e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039010.01.T01 | AT5G01140 | 29.947 | 374 | 226 | 10 | 1 | 347 | 87 | 451 | 7.35e-40 | 147 |
| MsG0780039010.01.T01 | AT5G01120 | 27.551 | 392 | 226 | 11 | 1 | 343 | 103 | 485 | 1.83e-32 | 127 |
| MsG0780039010.01.T01 | AT3G09140 | 27.525 | 396 | 233 | 11 | 1 | 347 | 103 | 493 | 1.72e-30 | 121 |
| MsG0780039010.01.T01 | AT5G43240 | 28.354 | 395 | 223 | 14 | 1 | 343 | 103 | 489 | 1.02e-27 | 114 |
| MsG0780039010.01.T01 | AT5G43240 | 28.354 | 395 | 223 | 14 | 1 | 343 | 103 | 489 | 1.02e-27 | 114 |
| MsG0780039010.01.T01 | AT5G43240 | 28.354 | 395 | 223 | 14 | 1 | 343 | 103 | 489 | 1.02e-27 | 114 |
| MsG0780039010.01.T01 | AT5G01150 | 27.692 | 390 | 228 | 13 | 1 | 348 | 103 | 480 | 5.97e-27 | 111 |
| MsG0780039010.01.T01 | AT3G09140 | 25.592 | 422 | 236 | 11 | 1 | 347 | 103 | 521 | 8.97e-27 | 111 |
| MsG0780039010.01.T01 | AT5G43240 | 28.882 | 322 | 187 | 8 | 60 | 343 | 28 | 345 | 1.27e-25 | 106 |
| MsG0780039010.01.T01 | AT5G01130 | 28.485 | 330 | 213 | 8 | 31 | 347 | 125 | 444 | 1.05e-23 | 101 |
| MsG0780039010.01.T01 | AT3G09110 | 27.434 | 226 | 154 | 5 | 1 | 222 | 103 | 322 | 4.18e-18 | 84.7 |
| MsG0780039010.01.T01 | AT5G37320 | 25.648 | 386 | 238 | 14 | 1 | 347 | 104 | 479 | 7.15e-17 | 82.0 |
| MsG0780039010.01.T01 | AT3G09120 | 26.667 | 225 | 141 | 7 | 1 | 211 | 99 | 313 | 3.99e-12 | 66.6 |
Find 57 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTCCTCCACATCATTT+AGG | 0.116915 | 7:+56732950 | None:intergenic |
| GATCCTAAATCCCCTATTTC+TGG | 0.194829 | 7:-56733078 | MsG0780039010.01.T01:CDS |
| CTAGCATATCCTCCAGAAAT+AGG | 0.222209 | 7:+56733066 | None:intergenic |
| AAGAAAACATACCTCTTTCT+TGG | 0.258951 | 7:+56733711 | None:intergenic |
| CCTCCAGAAATAGGGGATTT+AGG | 0.261981 | 7:+56733075 | None:intergenic |
| CATTTCCTCCACATCATTTA+GGG | 0.283304 | 7:+56732951 | None:intergenic |
| TGATCTTCTCAAATTGTCTT+TGG | 0.284928 | 7:-56733544 | MsG0780039010.01.T01:CDS |
| CGGCATGCAAAATTGAAAAT+AGG | 0.303590 | 7:-56733969 | MsG0780039010.01.T01:CDS |
| GATACCAAAACACAATTATA+AGG | 0.311098 | 7:-56733127 | MsG0780039010.01.T01:CDS |
| TAGAGCACCATTAAAGATTA+TGG | 0.313008 | 7:-56733046 | MsG0780039010.01.T01:CDS |
| TTAACCTCCATTTGGTTACT+TGG | 0.318360 | 7:+56733459 | None:intergenic |
| AAACTTGTCGTAACAACATT+TGG | 0.329105 | 7:+56733805 | None:intergenic |
| CTTGGTGATGTTGATATTAA+CGG | 0.332558 | 7:+56733729 | None:intergenic |
| CGATTTCTTTACTCAAAATC+AGG | 0.337067 | 7:+56733881 | None:intergenic |
| TCTGTCACCATAATCTTTAA+TGG | 0.356635 | 7:+56733039 | None:intergenic |
| AACCAAATGGAGGTTAATAT+TGG | 0.358716 | 7:-56733453 | MsG0780039010.01.T01:CDS |
| TAGCATATCCTCCAGAAATA+GGG | 0.363628 | 7:+56733067 | None:intergenic |
| GAGGAAATGGTCGTTAATAT+TGG | 0.365896 | 7:-56732937 | MsG0780039010.01.T01:CDS |
| GGTACTGTTTGAGTTACAAT+AGG | 0.387797 | 7:-56733948 | MsG0780039010.01.T01:CDS |
| TACCAATATTAACCTCCATT+TGG | 0.389269 | 7:+56733451 | None:intergenic |
| TCAGATTGAATAGAAATCAT+TGG | 0.402682 | 7:+56733171 | None:intergenic |
| TTAAATCTCCTTCAGAAGCT+TGG | 0.404186 | 7:-56733784 | MsG0780039010.01.T01:CDS |
| AAAGGAACAATCTGATGAAA+TGG | 0.409183 | 7:-56733424 | MsG0780039010.01.T01:CDS |
| ACAGAGGTAGATTGACTTCA+AGG | 0.415785 | 7:+56733999 | None:intergenic |
| AAGATATGAAATACCATCAA+TGG | 0.434003 | 7:+56732990 | None:intergenic |
| CCTAAATGATGTGGAGGAAA+TGG | 0.434219 | 7:-56732950 | MsG0780039010.01.T01:CDS |
| TCAAAATCTGCCTTTACAAC+CGG | 0.452562 | 7:-56732763 | MsG0780039010.01.T01:CDS |
| TTCATATCTTGAAAGAATGA+AGG | 0.484244 | 7:-56732977 | MsG0780039010.01.T01:CDS |
| GGTTAATATTGGTAAAGAAA+AGG | 0.492157 | 7:-56733442 | MsG0780039010.01.T01:CDS |
| TGCTTACAAAAGAGAATCCT+TGG | 0.497770 | 7:+56733280 | None:intergenic |
| AATATGCAACACTGTTCCTA+AGG | 0.500697 | 7:+56733305 | None:intergenic |
| CTGGTTGAGACCGGTTGTAA+AGG | 0.502849 | 7:+56732753 | None:intergenic |
| TGAGTTCAGACAAGTGTTTG+AGG | 0.507323 | 7:-56733224 | MsG0780039010.01.T01:CDS |
| TACTGTACTAACCTATGTAC+TGG | 0.514263 | 7:+56732734 | None:intergenic |
| TTGAATAGAAATCATTGGAA+TGG | 0.528986 | 7:+56733176 | None:intergenic |
| TATCAACATCACCAAGAAAG+AGG | 0.532453 | 7:-56733722 | MsG0780039010.01.T01:intron |
| TTTCTATTCAATCTGAACTC+AGG | 0.539211 | 7:-56733164 | MsG0780039010.01.T01:CDS |
| GATTATGGTGACAGACGACT+TGG | 0.540003 | 7:-56733031 | MsG0780039010.01.T01:CDS |
| ACTCCAATGTCATCCATTGA+TGG | 0.546893 | 7:-56733003 | MsG0780039010.01.T01:CDS |
| ATATGCAACACTGTTCCTAA+GGG | 0.555295 | 7:+56733306 | None:intergenic |
| GGTCGTTAATATTGGCAAGA+AGG | 0.557875 | 7:-56732929 | MsG0780039010.01.T01:CDS |
| CATTGACTCCAAGCTTCTGA+AGG | 0.561296 | 7:+56733776 | None:intergenic |
| ACCTATGTACTGGTTGAGAC+CGG | 0.565014 | 7:+56732744 | None:intergenic |
| AGCATATCCTCCAGAAATAG+GGG | 0.573043 | 7:+56733068 | None:intergenic |
| TTAAATATAAATTCCGACAG+AGG | 0.577023 | 7:+56733510 | None:intergenic |
| CAGAGGTAGATTGACTTCAA+GGG | 0.594324 | 7:+56734000 | None:intergenic |
| ACAGTGTTGCATATTCTCCA+AGG | 0.601352 | 7:-56733297 | MsG0780039010.01.T01:CDS |
| ATACCATCAATGGATGACAT+TGG | 0.606080 | 7:+56733000 | None:intergenic |
| TGTTCCAAGTAACCAAATGG+AGG | 0.609107 | 7:-56733463 | MsG0780039010.01.T01:CDS |
| CGTTAATATTGGCAAGAAGG+AGG | 0.619331 | 7:-56732926 | MsG0780039010.01.T01:intron |
| ACCGGTCTCAACCAGTACAT+AGG | 0.625446 | 7:-56732745 | MsG0780039010.01.T01:CDS |
| CCTAAATCCCCTATTTCTGG+AGG | 0.628731 | 7:-56733075 | MsG0780039010.01.T01:CDS |
| ATTTCCTCCACATCATTTAG+GGG | 0.634248 | 7:+56732952 | None:intergenic |
| TTTCCTCCACATCATTTAGG+GGG | 0.636216 | 7:+56732953 | None:intergenic |
| AATCTACCTCTGTGAGAATG+CGG | 0.661023 | 7:-56733989 | MsG0780039010.01.T01:CDS |
| TATGCAACACTGTTCCTAAG+GGG | 0.676395 | 7:+56733307 | None:intergenic |
| TGCATGCCGCATTCTCACAG+AGG | 0.696727 | 7:+56733983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTGTGTTTTGGTAT+CGG | + | Chr7:56733642-56733661 | None:intergenic | 20.0% |
| !!! | TTTTCCTTATAATTGTGTTT+TGG | + | Chr7:56733648-56733667 | None:intergenic | 20.0% |
| ! | AAGATATGAAATACCATCAA+TGG | + | Chr7:56733781-56733800 | None:intergenic | 25.0% |
| ! | AGGAATCAAAAATGTATTTG+TGG | - | Chr7:56732840-56732859 | MsG0780039010.01.T01:intron | 25.0% |
| ! | GATACCAAAACACAATTATA+AGG | - | Chr7:56733641-56733660 | MsG0780039010.01.T01:intron | 25.0% |
| ! | GGTTAATATTGGTAAAGAAA+AGG | - | Chr7:56733326-56733345 | MsG0780039010.01.T01:CDS | 25.0% |
| ! | TCAGATTGAATAGAAATCAT+TGG | + | Chr7:56733600-56733619 | None:intergenic | 25.0% |
| ! | TTAAATATAAATTCCGACAG+AGG | + | Chr7:56733261-56733280 | None:intergenic | 25.0% |
| ! | TTCATATCTTGAAAGAATGA+AGG | - | Chr7:56733791-56733810 | MsG0780039010.01.T01:CDS | 25.0% |
| ! | TTGAATAGAAATCATTGGAA+TGG | + | Chr7:56733595-56733614 | None:intergenic | 25.0% |
| !!! | CTGATTTTGAGTAAAGAAAT+CGG | - | Chr7:56732888-56732907 | MsG0780039010.01.T01:intron | 25.0% |
| !!! | TCAAAATCAGGATTTTTTCT+CGG | + | Chr7:56732878-56732897 | None:intergenic | 25.0% |
| AAACTTGTCGTAACAACATT+TGG | + | Chr7:56732966-56732985 | None:intergenic | 30.0% | |
| AAAGGAACAATCTGATGAAA+TGG | - | Chr7:56733344-56733363 | MsG0780039010.01.T01:CDS | 30.0% | |
| AACCAAATGGAGGTTAATAT+TGG | - | Chr7:56733315-56733334 | MsG0780039010.01.T01:CDS | 30.0% | |
| AAGAAAACATACCTCTTTCT+TGG | + | Chr7:56733060-56733079 | None:intergenic | 30.0% | |
| CAACCACAAGAAATCTAATT+TGG | + | Chr7:56733952-56733971 | None:intergenic | 30.0% | |
| CGATTTCTTTACTCAAAATC+AGG | + | Chr7:56732890-56732909 | None:intergenic | 30.0% | |
| TACCAATATTAACCTCCATT+TGG | + | Chr7:56733320-56733339 | None:intergenic | 30.0% | |
| TCACCAAATTAGATTTCTTG+TGG | - | Chr7:56733946-56733965 | MsG0780039010.01.T01:CDS | 30.0% | |
| TCTGTCACCATAATCTTTAA+TGG | + | Chr7:56733732-56733751 | None:intergenic | 30.0% | |
| TGATCTTCTCAAATTGTCTT+TGG | - | Chr7:56733224-56733243 | MsG0780039010.01.T01:CDS | 30.0% | |
| TTTCTATTCAATCTGAACTC+AGG | - | Chr7:56733604-56733623 | MsG0780039010.01.T01:intron | 30.0% | |
| ! | TAGAGCACCATTAAAGATTA+TGG | - | Chr7:56733722-56733741 | MsG0780039010.01.T01:intron | 30.0% |
| ! | TTTTGTTCCAAGTAACCAAA+TGG | - | Chr7:56733302-56733321 | MsG0780039010.01.T01:CDS | 30.0% |
| !! | CTTGGTGATGTTGATATTAA+CGG | + | Chr7:56733042-56733061 | None:intergenic | 30.0% |
| AATATGCAACACTGTTCCTA+AGG | + | Chr7:56733466-56733485 | None:intergenic | 35.0% | |
| ATACCATCAATGGATGACAT+TGG | + | Chr7:56733771-56733790 | None:intergenic | 35.0% | |
| ATATGCAACACTGTTCCTAA+GGG | + | Chr7:56733465-56733484 | None:intergenic | 35.0% | |
| ATTAGATTTCTTGTGGTTGC+AGG | - | Chr7:56733953-56733972 | MsG0780039010.01.T01:CDS | 35.0% | |
| ATTTCCTCCACATCATTTAG+GGG | + | Chr7:56733819-56733838 | None:intergenic | 35.0% | |
| CACATATCGAAGAATTAGTG+AGG | + | Chr7:56733189-56733208 | None:intergenic | 35.0% | |
| CATTTCCTCCACATCATTTA+GGG | + | Chr7:56733820-56733839 | None:intergenic | 35.0% | |
| CGGCATGCAAAATTGAAAAT+AGG | - | Chr7:56732799-56732818 | MsG0780039010.01.T01:intron | 35.0% | |
| CTCACTAATTCTTCGATATG+TGG | - | Chr7:56733187-56733206 | MsG0780039010.01.T01:CDS | 35.0% | |
| CTTCGATATGTGGTTTGAAT+AGG | - | Chr7:56733197-56733216 | MsG0780039010.01.T01:CDS | 35.0% | |
| GAGGAAATGGTCGTTAATAT+TGG | - | Chr7:56733831-56733850 | MsG0780039010.01.T01:CDS | 35.0% | |
| TAGCATATCCTCCAGAAATA+GGG | + | Chr7:56733704-56733723 | None:intergenic | 35.0% | |
| TATCAACATCACCAAGAAAG+AGG | - | Chr7:56733046-56733065 | MsG0780039010.01.T01:CDS | 35.0% | |
| TCAAAATCTGCCTTTACAAC+CGG | - | Chr7:56734005-56734024 | MsG0780039010.01.T01:CDS | 35.0% | |
| TGCTTACAAAAGAGAATCCT+TGG | + | Chr7:56733491-56733510 | None:intergenic | 35.0% | |
| TTAAATCTCCTTCAGAAGCT+TGG | - | Chr7:56732984-56733003 | MsG0780039010.01.T01:CDS | 35.0% | |
| TTAACCTCCATTTGGTTACT+TGG | + | Chr7:56733312-56733331 | None:intergenic | 35.0% | |
| TTAGATTTCTTGTGGTTGCA+GGG | - | Chr7:56733954-56733973 | MsG0780039010.01.T01:CDS | 35.0% | |
| ! | GGTACTGTTTGAGTTACAAT+AGG | - | Chr7:56732820-56732839 | MsG0780039010.01.T01:intron | 35.0% |
| !! | GAGTGTGTTAGTCTTCATTT+AGG | - | Chr7:56733872-56733891 | MsG0780039010.01.T01:CDS | 35.0% |
| !! | TGTTAGTCTTCATTTAGGAC+AGG | - | Chr7:56733877-56733896 | MsG0780039010.01.T01:CDS | 35.0% |
| !!! | GTTTTGGTATCGGTAATATC+TGG | + | Chr7:56733632-56733651 | None:intergenic | 35.0% |
| AATCTACCTCTGTGAGAATG+CGG | - | Chr7:56732779-56732798 | MsG0780039010.01.T01:CDS | 40.0% | |
| ACAGTGTTGCATATTCTCCA+AGG | - | Chr7:56733471-56733490 | MsG0780039010.01.T01:CDS | 40.0% | |
| ACTCCAATGTCATCCATTGA+TGG | - | Chr7:56733765-56733784 | MsG0780039010.01.T01:CDS | 40.0% | |
| AGCATATCCTCCAGAAATAG+GGG | + | Chr7:56733703-56733722 | None:intergenic | 40.0% | |
| CCATTTCCTCCACATCATTT+AGG | + | Chr7:56733821-56733840 | None:intergenic | 40.0% | |
| CCTAAATGATGTGGAGGAAA+TGG | - | Chr7:56733818-56733837 | MsG0780039010.01.T01:CDS | 40.0% | |
| CGTTAATATTGGCAAGAAGG+AGG | - | Chr7:56733842-56733861 | MsG0780039010.01.T01:CDS | 40.0% | |
| CTAGCATATCCTCCAGAAAT+AGG | + | Chr7:56733705-56733724 | None:intergenic | 40.0% | |
| GATCCTAAATCCCCTATTTC+TGG | - | Chr7:56733690-56733709 | MsG0780039010.01.T01:intron | 40.0% | |
| GGTCGTTAATATTGGCAAGA+AGG | - | Chr7:56733839-56733858 | MsG0780039010.01.T01:CDS | 40.0% | |
| TATGCAACACTGTTCCTAAG+GGG | + | Chr7:56733464-56733483 | None:intergenic | 40.0% | |
| TGAGTTCAGACAAGTGTTTG+AGG | - | Chr7:56733544-56733563 | MsG0780039010.01.T01:CDS | 40.0% | |
| TGTTCCAAGTAACCAAATGG+AGG | - | Chr7:56733305-56733324 | MsG0780039010.01.T01:CDS | 40.0% | |
| TTGGCAAGAAGGAGGTAAAA+AGG | - | Chr7:56733850-56733869 | MsG0780039010.01.T01:CDS | 40.0% | |
| TTTCCTCCACATCATTTAGG+GGG | + | Chr7:56733818-56733837 | None:intergenic | 40.0% | |
| ! | ACAGAGGTAGATTGACTTCA+AGG | + | Chr7:56732772-56732791 | None:intergenic | 40.0% |
| ! | AGTTTTCTCACTTTCCCCTT+AGG | - | Chr7:56733447-56733466 | MsG0780039010.01.T01:CDS | 40.0% |
| ! | CAGAGGTAGATTGACTTCAA+GGG | + | Chr7:56732771-56732790 | None:intergenic | 40.0% |
| ! | GGTTGTAAAGGCAGATTTTG+AGG | + | Chr7:56734006-56734025 | None:intergenic | 40.0% |
| CCTCCAGAAATAGGGGATTT+AGG | + | Chr7:56733696-56733715 | None:intergenic | 45.0% | |
| GATTATGGTGACAGACGACT+TGG | - | Chr7:56733737-56733756 | MsG0780039010.01.T01:CDS | 45.0% | |
| GGTCTCAAAAACTCCTCTGT+CGG | - | Chr7:56733245-56733264 | MsG0780039010.01.T01:CDS | 45.0% | |
| !! | ACCTATGTACTGGTTGAGAC+CGG | + | Chr7:56734027-56734046 | None:intergenic | 45.0% |
| !! | CATTGACTCCAAGCTTCTGA+AGG | + | Chr7:56732995-56733014 | None:intergenic | 45.0% |
| !! | CCTAAATCCCCTATTTCTGG+AGG | - | Chr7:56733693-56733712 | MsG0780039010.01.T01:intron | 45.0% |
| ACCGGTCTCAACCAGTACAT+AGG | - | Chr7:56734023-56734042 | MsG0780039010.01.T01:CDS | 50.0% | |
| CTGGTTGAGACCGGTTGTAA+AGG | + | Chr7:56734018-56734037 | None:intergenic | 50.0% | |
| GAAGGTCCCCCTAAATGATG+TGG | - | Chr7:56733809-56733828 | MsG0780039010.01.T01:CDS | 50.0% | |
| GGTCCCCCTAAATGATGTGG+AGG | - | Chr7:56733812-56733831 | MsG0780039010.01.T01:CDS | 55.0% | |
| TGCATGCCGCATTCTCACAG+AGG | + | Chr7:56732788-56732807 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 56732741 | 56734049 | 56732741 | ID=MsG0780039010.01;Name=MsG0780039010.01 |
| Chr7 | mRNA | 56732741 | 56734049 | 56732741 | ID=MsG0780039010.01.T01;Parent=MsG0780039010.01;Name=MsG0780039010.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|348 |
| Chr7 | exon | 56733723 | 56734049 | 56733723 | ID=MsG0780039010.01.T01:exon:8130;Parent=MsG0780039010.01.T01 |
| Chr7 | exon | 56732927 | 56733571 | 56732927 | ID=MsG0780039010.01.T01:exon:8129;Parent=MsG0780039010.01.T01 |
| Chr7 | exon | 56732741 | 56732815 | 56732741 | ID=MsG0780039010.01.T01:exon:8128;Parent=MsG0780039010.01.T01 |
| Chr7 | CDS | 56733723 | 56734049 | 56733723 | ID=MsG0780039010.01.T01:cds;Parent=MsG0780039010.01.T01 |
| Chr7 | CDS | 56732927 | 56733571 | 56732927 | ID=MsG0780039010.01.T01:cds;Parent=MsG0780039010.01.T01 |
| Chr7 | CDS | 56732741 | 56732815 | 56732741 | ID=MsG0780039010.01.T01:cds;Parent=MsG0780039010.01.T01 |
| Gene Sequence |
| Protein sequence |
