AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039016.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039016.01.T01 MTR_7g066340 75.817 306 64 2 1 296 1 306 1.46e-156 459
MsG0780039016.01.T01 MTR_7g066340 88.811 143 16 0 487 629 334 476 2.01e-79 259
MsG0780039016.01.T01 MTR_7g066350 67.427 307 84 5 1 295 1 303 6.89e-130 390
MsG0780039016.01.T01 MTR_7g066350 63.200 125 37 3 492 610 337 458 1.68e-34 137
MsG0780039016.01.T01 MTR_1g041315 62.939 313 91 4 8 296 10 321 2.12e-124 377
MsG0780039016.01.T01 MTR_1g041315 63.107 103 37 1 488 590 350 451 9.52e-33 132
MsG0780039016.01.T01 MTR_7g066570 64.784 301 102 4 6 303 8 307 3.33e-121 371
MsG0780039016.01.T01 MTR_7g066570 44.910 167 57 4 488 621 329 493 3.14e-27 117
MsG0780039016.01.T01 MTR_7g066310 61.458 288 56 4 9 296 4 236 2.97e-109 335
MsG0780039016.01.T01 MTR_7g066310 85.417 144 21 0 486 629 263 406 6.86e-76 248
MsG0780039016.01.T01 MTR_7g012680 58.075 322 114 6 3 321 5 308 4.15e-108 333
MsG0780039016.01.T01 MTR_7g012680 42.336 137 67 2 488 612 315 451 6.06e-20 93.6
MsG0780039016.01.T01 MTR_7g066260 56.209 306 117 7 6 296 9 312 5.84e-105 327
MsG0780039016.01.T01 MTR_7g066260 61.184 152 49 2 488 629 341 492 2.63e-44 165
MsG0780039016.01.T01 MTR_7g066290 55.305 311 124 8 6 303 9 317 1.17e-93 295
MsG0780039016.01.T01 MTR_7g066290 55.000 120 30 1 488 607 339 434 1.34e-27 116
MsG0780039016.01.T01 MTR_7g066400 53.035 313 100 5 1 296 1 283 4.89e-93 294
MsG0780039016.01.T01 MTR_7g066400 59.677 124 43 1 487 603 311 434 3.52e-36 141
MsG0780039016.01.T01 MTR_7g066360 53.674 313 126 6 6 303 8 316 6.99e-90 287
MsG0780039016.01.T01 MTR_7g066360 55.333 150 58 2 488 628 329 478 2.36e-39 151
MsG0780039016.01.T01 MTR_7g058710 51.118 313 119 9 1 296 1 296 1.63e-88 284
MsG0780039016.01.T01 MTR_7g058710 40.523 153 57 2 488 606 325 477 3.63e-20 94.4
MsG0780039016.01.T01 MTR_7g066280 50.742 337 126 12 321 629 89 413 2.17e-82 265
MsG0780039016.01.T01 MTR_7g066280 65.347 202 57 3 91 292 1 189 1.92e-81 263
MsG0780039016.01.T01 MTR_7g066580 50.515 291 99 10 18 296 1 258 9.16e-79 257
MsG0780039016.01.T01 MTR_7g066580 42.424 165 51 4 488 612 287 447 5.64e-23 102
MsG0780039016.01.T01 MTR_7g066410 41.956 317 149 5 13 295 11 326 1.95e-71 239
MsG0780039016.01.T01 MTR_7g066410 47.368 95 42 1 520 606 418 512 1.48e-17 86.7
MsG0780039016.01.T01 MTR_7g066410 30.252 238 124 10 12 222 284 506 9.66e-14 74.7
MsG0780039016.01.T01 MTR_7g058700 48.333 300 93 6 24 296 531 795 3.51e-71 248
MsG0780039016.01.T01 MTR_7g058700 54.054 74 34 0 533 606 848 921 1.16e-15 81.3
MsG0780039016.01.T01 MTR_7g063900 45.819 299 145 7 12 302 10 299 1.25e-70 237
MsG0780039016.01.T01 MTR_7g066430 43.689 309 157 9 12 306 4 309 3.33e-69 233
MsG0780039016.01.T01 MTR_7g066430 35.669 157 63 3 488 606 329 485 2.65e-17 85.5
MsG0780039016.01.T01 MTR_7g063890 43.421 304 156 6 6 302 21 315 6.92e-67 227
MsG0780039016.01.T01 MTR_7g063660 42.617 298 151 7 8 295 5 292 6.69e-65 221
MsG0780039016.01.T01 MTR_7g063660 27.391 230 132 7 12 221 250 464 1.40e-16 83.2
MsG0780039016.01.T01 MTR_7g063660 31.897 116 75 1 495 606 356 471 5.24e-12 68.9
MsG0780039016.01.T01 MTR_7g066490 45.172 290 141 9 12 296 16 292 3.57e-64 218
MsG0780039016.01.T01 MTR_7g066490 53.521 71 33 0 538 608 339 409 1.05e-16 83.2
MsG0780039016.01.T01 MTR_2g029400 48.659 261 77 5 6 257 8 220 1.14e-63 216
MsG0780039016.01.T01 MTR_2g029400 39.286 140 52 3 488 594 264 403 9.70e-16 80.1
MsG0780039016.01.T01 MTR_7g066480 43.000 300 149 7 11 296 15 306 1.46e-62 213
MsG0780039016.01.T01 MTR_7g066480 53.521 71 33 0 538 608 353 423 5.42e-17 84.3
MsG0780039016.01.T01 MTR_1g014060 53.917 217 89 5 21 228 9 223 2.08e-62 212
MsG0780039016.01.T01 MTR_1g014060 42.143 140 65 3 488 612 252 390 4.19e-19 90.1
MsG0780039016.01.T01 MTR_7g063830 39.145 304 159 7 13 303 11 301 3.55e-61 210
MsG0780039016.01.T01 MTR_7g063880 43.345 293 144 7 11 295 10 288 7.39e-61 210
MsG0780039016.01.T01 MTR_7g063880 44.578 83 44 1 527 607 381 463 1.26e-12 70.9
MsG0780039016.01.T01 MTR_7g062300 40.391 307 160 9 1 294 1 297 1.43e-60 209
MsG0780039016.01.T01 MTR_7g062300 38.298 141 60 4 489 602 329 469 6.44e-14 75.1
MsG0780039016.01.T01 MTR_7g062300 40.000 85 45 2 12 95 256 335 6.30e-12 68.6
MsG0780039016.01.T01 MTR_7g063840 41.534 313 156 11 1 302 1 297 1.33e-58 204
MsG0780039016.01.T01 MTR_7g063840 25.991 227 137 8 12 222 250 461 6.07e-12 68.6
MsG0780039016.01.T01 MTR_7g063820 40.566 318 166 8 6 310 4 311 1.44e-58 204
MsG0780039016.01.T01 MTR_7g063820 33.557 149 65 3 492 606 330 478 1.07e-11 67.8
MsG0780039016.01.T01 MTR_7g062280 40.129 309 150 10 11 294 9 307 1.69e-57 202
MsG0780039016.01.T01 MTR_7g062280 28.636 220 142 5 12 222 266 479 4.37e-15 78.6
MsG0780039016.01.T01 MTR_7g062280 35.135 148 65 2 489 606 339 485 8.32e-15 77.8
MsG0780039016.01.T01 MTR_4g017440 38.924 316 160 9 6 295 8 316 5.48e-57 201
MsG0780039016.01.T01 MTR_4g017440 30.481 187 110 5 5 178 267 446 1.66e-13 73.9
MsG0780039016.01.T01 MTR_4g017610 37.171 304 160 8 15 295 16 311 6.51e-54 191
MsG0780039016.01.T01 MTR_7g063920 40.476 294 122 8 11 295 10 259 7.23e-51 182
MsG0780039016.01.T01 MTR_7g063920 24.664 223 141 6 12 222 217 424 2.68e-14 75.9
MsG0780039016.01.T01 MTR_7g063920 46.575 73 39 0 534 606 358 430 1.96e-13 73.2
MsG0780039016.01.T01 MTR_4g017410 36.449 321 165 10 6 295 3 315 1.01e-50 183
MsG0780039016.01.T01 MTR_3g007740 40.468 299 146 9 11 296 8 287 1.73e-49 179
MsG0780039016.01.T01 MTR_4g019310 35.423 319 165 10 1 292 1 305 1.99e-49 180
MsG0780039016.01.T01 MTR_4g019310 45.455 88 42 2 521 602 399 486 1.43e-13 73.9
MsG0780039016.01.T01 MTR_3g065200 40.484 289 122 10 12 291 3 250 1.26e-48 177
MsG0780039016.01.T01 MTR_3g065200 35.821 134 54 3 492 593 275 408 6.82e-13 71.6
MsG0780039016.01.T01 MTR_4g017830 35.759 316 175 9 1 295 1 309 6.19e-48 176
MsG0780039016.01.T01 MTR_4g017830 28.226 248 141 8 12 229 267 507 2.81e-13 73.2
MsG0780039016.01.T01 MTR_4g017830 42.857 84 48 0 534 617 429 512 1.97e-12 70.5
MsG0780039016.01.T01 MTR_4g019340 34.713 314 167 7 13 295 39 345 1.94e-47 174
MsG0780039016.01.T01 MTR_4g019340 31.050 219 119 8 12 217 303 502 3.14e-14 75.9
MsG0780039016.01.T01 MTR_7g063670 37.117 326 150 9 13 309 16 315 4.31e-45 167
MsG0780039016.01.T01 MTR_7g063670 44.000 75 41 1 533 606 377 451 3.63e-11 66.2
MsG0780039016.01.T01 MTR_4g017470 30.423 355 174 9 1 323 1 314 1.02e-39 152
MsG0780039016.01.T01 MTR_4g017470 29.187 209 120 7 5 192 227 428 2.04e-15 79.7
MsG0780039016.01.T01 MTR_7g062270 44.253 174 90 4 13 183 11 180 1.99e-38 146
MsG0780039016.01.T01 MTR_7g066390 70.833 96 28 0 519 614 35 130 4.27e-38 138
MsG0780039016.01.T01 MTR_4g017550 34.043 282 151 10 39 295 18 289 3.07e-34 136
MsG0780039016.01.T01 MTR_4g017550 30.952 210 105 8 5 190 240 433 1.48e-17 86.3
MsG0780039016.01.T01 MTR_2g067310 46.243 173 53 4 23 195 58 190 2.49e-33 128
MsG0780039016.01.T01 MTR_7g063690 30.797 276 117 7 13 280 13 222 6.74e-26 107
MsG0780039016.01.T01 MTR_1g115440 34.167 240 124 8 11 227 10 238 3.13e-25 105
MsG0780039016.01.T01 MTR_7g066680 56.122 98 42 1 206 302 38 135 1.69e-24 105
MsG0780039016.01.T01 MTR_7g066680 37.640 178 49 4 488 603 158 335 1.78e-19 90.9
MsG0780039016.01.T01 MTR_7g066680 29.744 195 122 6 8 195 82 268 3.21e-13 71.6
MsG0780039016.01.T01 MTR_8g023240 24.852 338 213 11 13 327 38 357 1.15e-22 102
MsG0780039016.01.T01 MTR_8g445860 31.330 233 137 6 12 228 13 238 1.88e-22 97.1
MsG0780039016.01.T01 MTR_8g445860 45.833 72 38 1 529 599 160 231 9.12e-11 62.8
MsG0780039016.01.T01 MTR_0150s0010 30.364 247 134 7 6 227 4 237 1.86e-18 85.5
MsG0780039016.01.T01 MTR_1g115450 45.238 84 41 1 12 95 7 85 1.91e-16 77.0
MsG0780039016.01.T01 MTR_4g019240 37.705 122 62 5 3 114 4 121 8.79e-16 76.3
MsG0780039016.01.T01 MTR_1g115455 28.452 239 135 8 12 228 9 233 1.13e-15 77.4
MsG0780039016.01.T01 MTR_7g063720 26.941 219 131 8 12 222 23 220 2.32e-15 76.6
MsG0780039016.01.T01 MTR_7g063720 35.878 131 71 3 489 606 96 226 8.15e-15 74.7
MsG0780039016.01.T01 MTR_0150s0030 42.353 85 43 2 12 95 8 87 1.03e-13 70.9
MsG0780039016.01.T01 MTR_4g116900 86.842 38 5 0 297 334 282 319 1.07e-13 74.3
MsG0780039016.01.T01 MTR_1g033480 72.093 43 12 0 342 384 199 241 3.50e-13 70.5
MsG0780039016.01.T01 MTR_8g044880 41.758 91 47 2 12 101 8 93 7.24e-13 69.7
MsG0780039016.01.T01 MTR_8g445910 43.529 85 42 2 12 95 8 87 1.13e-12 68.9
MsG0780039016.01.T01 MTR_7g063850 41.000 100 54 2 512 606 183 282 1.38e-12 69.3
MsG0780039016.01.T01 MTR_7g100420 46.154 91 36 3 6 83 26 116 3.45e-12 68.9
MsG0780039016.01.T01 MTR_7g100420 41.489 94 52 1 516 606 304 397 2.26e-11 66.6
MsG0780039016.01.T01 MTR_8g445920 40.000 85 46 1 6 90 4 83 4.39e-12 63.5
MsG0780039016.01.T01 MTR_8g044890 40.000 85 46 1 6 90 4 83 4.39e-12 63.5
MsG0780039016.01.T01 MTR_7g063760 45.455 66 35 1 542 606 2 67 1.40e-11 60.8
MsG0780039016.01.T01 MTR_1g115470 39.080 87 48 1 12 98 6 87 2.46e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039016.01.T01 AT3G09110 34.737 285 177 3 12 288 9 292 3.67e-47 169
MsG0780039016.01.T01 AT3G09140 35.077 325 174 8 1 294 1 319 1.24e-43 164
MsG0780039016.01.T01 AT3G09140 32.861 353 172 9 1 294 1 347 1.56e-40 155
MsG0780039016.01.T01 AT3G09120 33.670 297 175 7 9 288 3 294 6.03e-40 149
MsG0780039016.01.T01 AT5G01120 32.237 304 185 6 13 297 10 311 1.57e-38 149
MsG0780039016.01.T01 AT5G43240 32.215 298 176 8 13 288 10 303 2.19e-38 149
MsG0780039016.01.T01 AT5G43240 35.484 124 75 3 505 628 393 511 4.18e-11 66.2
MsG0780039016.01.T01 AT5G43240 32.215 298 176 8 13 288 10 303 2.19e-38 149
MsG0780039016.01.T01 AT5G43240 35.484 124 75 3 505 628 393 511 4.18e-11 66.2
MsG0780039016.01.T01 AT5G43240 32.215 298 176 8 13 288 10 303 2.19e-38 149
MsG0780039016.01.T01 AT5G43240 35.484 124 75 3 505 628 393 511 4.18e-11 66.2
MsG0780039016.01.T01 AT5G01150 31.831 355 191 12 12 326 9 352 2.15e-37 146
MsG0780039016.01.T01 AT5G01130 33.115 305 181 7 1 294 1 293 9.64e-37 143
MsG0780039016.01.T01 AT5G01140 31.270 307 169 8 12 299 9 292 3.66e-34 136
MsG0780039016.01.T01 AT5G01140 36.607 112 62 3 524 628 363 472 7.06e-11 65.5
MsG0780039016.01.T01 AT5G37320 27.653 311 194 10 13 297 10 315 3.18e-25 110
MsG0780039016.01.T01 AT5G43240 35.484 124 75 3 505 628 249 367 4.16e-11 65.5

Find 123 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTACCTTTGGCTTCTTTA+AGG 0.108564 7:+56831133 None:intergenic
GATCCTAAATCCCCTATTTC+TGG 0.192592 7:-56832194 MsG0780039016.01.T01:CDS
GCTTCTTAACATTGCCTTTA+GGG 0.201640 7:-56838894 MsG0780039016.01.T01:CDS
TGGAGCACCATTAACGTTTA+TGG 0.217850 7:-56832162 MsG0780039016.01.T01:CDS
TTCCATTGACTCCATGCTTC+TGG 0.221371 7:+56838446 None:intergenic
CCAGCATATCCACCAGAAAT+AGG 0.239307 7:+56832182 None:intergenic
GTCGAATCTTATTATATCTA+TGG 0.246097 7:-56835147 MsG0780039016.01.T01:CDS
TCTACCTTTGGCTTCTTTAA+GGG 0.254255 7:+56831134 None:intergenic
CCACCAGAAATAGGGGATTT+AGG 0.261981 7:+56832191 None:intergenic
AATAGAGATGGAATATTTAA+AGG 0.264217 7:-56834641 MsG0780039016.01.T01:intron
CCAACCTCCAATCCGTTTCT+TGG 0.279458 7:+56838195 None:intergenic
CAAAGTTAGCATTAGAGTTT+TGG 0.286575 7:-56838983 MsG0780039016.01.T01:CDS
CGACTTCTTTACTCAAAATC+TGG 0.292213 7:+56838554 None:intergenic
CCTTAATGACGTGGAGAAAA+TGG 0.295092 7:-56832066 MsG0780039016.01.T01:CDS
AGCTTCTTAACATTGCCTTT+AGG 0.310196 7:-56838895 MsG0780039016.01.T01:CDS
CGGCATGCAAAATTGAAAAT+AGG 0.311961 7:-56838642 MsG0780039016.01.T01:CDS
ATGCATATATGCAAGAGAAT+TGG 0.320914 7:+56833654 None:intergenic
CTAACTTTGTCACCTTGTTT+TGG 0.321905 7:+56838997 None:intergenic
CAATGTTTAATTTCATATTC+CGG 0.328830 7:+56838707 None:intergenic
AAGAATTCGATTAGACCTTC+AGG 0.347965 7:+56835111 None:intergenic
AATGTTGAAGCAGTAAAATT+TGG 0.349258 7:-56838841 MsG0780039016.01.T01:CDS
CAGCATATCCACCAGAAATA+GGG 0.355977 7:+56832183 None:intergenic
GATACCTACAGAAAATTATA+AGG 0.356507 7:-56832243 MsG0780039016.01.T01:CDS
CTGTAGGTATCGGTAATATC+TGG 0.356911 7:+56832255 None:intergenic
AAACTTGTCATAACCGCATT+TGG 0.359305 7:+56838478 None:intergenic
TCAAAATCTGGAACGTTTCT+CGG 0.365833 7:+56838566 None:intergenic
TGATCTTCTCAAATTGTCAT+TGG 0.376840 7:-56838280 MsG0780039016.01.T01:CDS
ATATATAGAAAAGGCTTTGT+TGG 0.384106 7:+56833702 None:intergenic
CTACAATATGAGGGATTTGC+GGG 0.385164 7:+56836340 None:intergenic
AACGGCCTCAACCAGTTCAT+TGG 0.391379 7:-56831884 MsG0780039016.01.T01:intron
ATCTTGATCAACAGTATCTA+TGG 0.394065 7:-56838786 MsG0780039016.01.T01:CDS
CCTATTTCTGGTGGATATGC+TGG 0.397124 7:-56832182 MsG0780039016.01.T01:CDS
GAACTAGTAGCTACAATATG+AGG 0.404995 7:+56836330 None:intergenic
CAAGAAACGGATTGGAGGTT+GGG 0.405114 7:-56838194 MsG0780039016.01.T01:CDS
GGCAGGAAGTAGATCTGTTC+AGG 0.408889 7:-56831180 MsG0780039016.01.T01:intron
TCTGTCACCATAAACGTTAA+TGG 0.410819 7:+56832155 None:intergenic
TAGGAAAATGTTCATCTCAA+TGG 0.414321 7:-56836401 MsG0780039016.01.T01:CDS
TGCATATATGCAAGAGAATT+GGG 0.415747 7:+56833655 None:intergenic
GAGTTCAGATTGAGCGGAAA+TGG 0.418322 7:+56832283 None:intergenic
CTCCAGAAGCATGGAGTCAA+TGG 0.421817 7:-56838448 MsG0780039016.01.T01:CDS
GAGAAAATGGTGGTAGAGAT+TGG 0.428008 7:-56832053 MsG0780039016.01.T01:CDS
CAACCTCCAATCCGTTTCTT+GGG 0.430506 7:+56838196 None:intergenic
AAGATATGAAATACCGTCAA+TGG 0.431308 7:+56832106 None:intergenic
AACGGATTGGAGGTTGGGAT+TGG 0.432333 7:-56838189 MsG0780039016.01.T01:CDS
TACTATACTAACCAATGAAC+TGG 0.434085 7:+56831873 None:intergenic
AGGAAAATGTTCATCTCAAT+GGG 0.437240 7:-56836400 MsG0780039016.01.T01:CDS
AAAGGAAGAATCTAATGAAA+TGG 0.437473 7:-56838160 MsG0780039016.01.T01:CDS
GACTGAAGATGGTCTCATAA+TGG 0.450277 7:-56835779 MsG0780039016.01.T01:CDS
TTGGAGGTTGGGATTGGTAG+AGG 0.452268 7:-56838183 MsG0780039016.01.T01:CDS
AATATGCAACACTGCTCCTA+AGG 0.452936 7:+56838041 None:intergenic
TCACAGTCTTGTCACTGAAA+AGG 0.454487 7:-56835839 MsG0780039016.01.T01:CDS
TTCATATCTTGAAAGAATGA+AGG 0.455227 7:-56832093 MsG0780039016.01.T01:CDS
TCTGTTTGCTGAGGCAGATA+AGG 0.456755 7:-56838938 MsG0780039016.01.T01:CDS
GCAAGAGAATTGGGTACCAT+TGG 0.458284 7:+56833664 None:intergenic
TCGAATCTTATTATATCTAT+GGG 0.460926 7:-56835146 MsG0780039016.01.T01:CDS
TCAAAATCTGCCTTGACAAA+CGG 0.470384 7:-56831902 MsG0780039016.01.T01:CDS
TTTAGTCCCAAGAAACGGAT+TGG 0.478591 7:-56838202 MsG0780039016.01.T01:CDS
TACTCAATCCTATAAACTCA+TGG 0.488738 7:-56838741 MsG0780039016.01.T01:CDS
GAAAATTTAGTCCCAAGAAA+CGG 0.492817 7:-56838207 MsG0780039016.01.T01:CDS
GAAGAACTCGAGGTAACAGC+TGG 0.500171 7:-56835802 MsG0780039016.01.T01:CDS
ACATTCTTCATATATAGAAA+AGG 0.504613 7:+56833693 None:intergenic
CCAAGAAACGGATTGGAGGT+TGG 0.507870 7:-56838195 MsG0780039016.01.T01:CDS
GTAACAGCTGGGACTGAAGA+TGG 0.515156 7:-56835790 MsG0780039016.01.T01:CDS
AATGGGATTTACGTGAAGCT+AGG 0.525877 7:-56836383 MsG0780039016.01.T01:CDS
GCTACAATATGAGGGATTTG+CGG 0.530498 7:+56836339 None:intergenic
GGGGTCATTCTTATCCCTGA+AGG 0.531533 7:-56835126 MsG0780039016.01.T01:CDS
GGTGGTAGAGATTGGCCAGA+TGG 0.535489 7:-56832045 MsG0780039016.01.T01:CDS
CTGGTTGAGGCCGTTTGTCA+AGG 0.537345 7:+56831892 None:intergenic
GTTACCTCGAGTTCTTCGTC+AGG 0.537857 7:+56835808 None:intergenic
ACAGAGGTAGTAGGACTGGA+AGG 0.548379 7:+56838672 None:intergenic
ATGACAATCAGACTGGAAGA+TGG 0.548482 7:-56835872 MsG0780039016.01.T01:intron
ACTCAATCCTATAAACTCAT+GGG 0.552160 7:-56838740 MsG0780039016.01.T01:CDS
TCTCACAGAGGTAGTAGGAC+TGG 0.553733 7:+56838668 None:intergenic
ATATGCAACACTGCTCCTAA+GGG 0.554427 7:+56838042 None:intergenic
AGCATATCCACCAGAAATAG+GGG 0.561344 7:+56832184 None:intergenic
AGTCCCAAGAAACGGATTGG+AGG 0.561405 7:-56838199 MsG0780039016.01.T01:CDS
TTAAATCTCCTCCAGAAGCA+TGG 0.561651 7:-56838457 MsG0780039016.01.T01:CDS
CATTGACTCCATGCTTCTGG+AGG 0.565198 7:+56838449 None:intergenic
ACTAACCAATGAACTGGTTG+AGG 0.567961 7:+56831879 None:intergenic
CAAGAAATATCGTCATCTGC+AGG 0.570558 7:-56835746 MsG0780039016.01.T01:CDS
AGAATTCGATTAGACCTTCA+GGG 0.572449 7:+56835112 None:intergenic
CCTAAATCCCCTATTTCTGG+TGG 0.575624 7:-56832191 MsG0780039016.01.T01:CDS
GGTTGGGATTGGTAGAGGAA+AGG 0.578117 7:-56838178 MsG0780039016.01.T01:CDS
AGTCTTGCAATAGTCCCTAA+AGG 0.578435 7:+56838880 None:intergenic
CCAGGTACATGCAGTTCCAT+CGG 0.587197 7:+56836305 None:intergenic
CGTGTTCTCACAGAGGTAGT+AGG 0.590180 7:+56838663 None:intergenic
AATTCAATATCAAATAGAGA+TGG 0.592810 7:-56834653 MsG0780039016.01.T01:CDS
TCTAATCGAATTCTTTCCCA+AGG 0.593019 7:-56835103 MsG0780039016.01.T01:intron
GTAGCTACTAGTTCCTCCGA+TGG 0.593415 7:-56836321 MsG0780039016.01.T01:CDS
ACTCCAATGTCATCCATTGA+CGG 0.602769 7:-56832119 MsG0780039016.01.T01:CDS
CAGTGTTGCATATTCTCCAA+CGG 0.603523 7:-56838032 MsG0780039016.01.T01:intron
GAAAATCCCTCACCAAAACA+AGG 0.603627 7:-56839009 MsG0780039016.01.T01:CDS
ATACCGTCAATGGATGACAT+TGG 0.606080 7:+56832116 None:intergenic
TTTCCGCTCAATCTGAACTC+AGG 0.610861 7:-56832280 MsG0780039016.01.T01:CDS
GTTTATGGTGACAGATGACT+TGG 0.612440 7:-56832147 MsG0780039016.01.T01:CDS
CTACTACCTCTGTGAGAACA+CGG 0.613030 7:-56838662 MsG0780039016.01.T01:CDS
CTCAATCCTATAAACTCATG+GGG 0.615712 7:-56838739 MsG0780039016.01.T01:CDS
CAGAGGTAGTAGGACTGGAA+GGG 0.616285 7:+56838673 None:intergenic
TCAGATTGAGCGGAAATGGT+AGG 0.616944 7:+56832287 None:intergenic
TTCACTCTATCAAAGTGTGT+CGG 0.618376 7:-56838809 MsG0780039016.01.T01:CDS
GTTCCTGAGTTCAGATTGAG+CGG 0.623935 7:+56832277 None:intergenic
AACTAGTAGCTACAATATGA+GGG 0.629033 7:+56836331 None:intergenic
AAACACAGTTCTGTTTGCTG+AGG 0.631062 7:-56838947 MsG0780039016.01.T01:CDS
GGTAGAGATTGGCCAGATGG+AGG 0.636268 7:-56832042 MsG0780039016.01.T01:intron
AGGGACTATTGCAAGACTCG+TGG 0.639762 7:-56838875 MsG0780039016.01.T01:CDS
TTAAATATAAAGTCGGACAG+AGG 0.641473 7:+56838246 None:intergenic
GGTACATGCAGTTCCATCGG+AGG 0.644441 7:+56836308 None:intergenic
GCAGATGACGATATTTCTTG+CGG 0.647567 7:+56835749 None:intergenic
TGTATTTGTCAGGTAACATG+TGG 0.650194 7:-56834692 MsG0780039016.01.T01:intron
CTTTCCTGACGAAGAACTCG+AGG 0.655796 7:-56835812 MsG0780039016.01.T01:CDS
GTATTTGTCAGGTAACATGT+GGG 0.658755 7:-56834691 MsG0780039016.01.T01:intron
GTTGCTAGCTGCTATAGCAG+AGG 0.659615 7:-56833541 MsG0780039016.01.T01:intron
CAATCCTATAAACTCATGGG+GGG 0.660598 7:-56838737 MsG0780039016.01.T01:CDS
TAGACCCTTAAAGAAGCCAA+AGG 0.662957 7:-56831138 MsG0780039016.01.T01:CDS
TCAATCCTATAAACTCATGG+GGG 0.663846 7:-56838738 MsG0780039016.01.T01:CDS
GAAGGTTCCCCTTAATGACG+TGG 0.668252 7:-56832075 MsG0780039016.01.T01:CDS
TCTATGGTCAGACACATGCA+AGG 0.670514 7:-56838770 MsG0780039016.01.T01:CDS
TATGCAACACTGCTCCTAAG+GGG 0.682165 7:+56838043 None:intergenic
CGAATCTTATTATATCTATG+GGG 0.692340 7:-56835145 MsG0780039016.01.T01:CDS
AAGAACTCGAGGTAACAGCT+GGG 0.695999 7:-56835801 MsG0780039016.01.T01:CDS
TAATGACGTGGAGAAAATGG+TGG 0.696756 7:-56832063 MsG0780039016.01.T01:CDS
TGCATGCCGTGTTCTCACAG+AGG 0.701708 7:+56838656 None:intergenic
TCTTTCTGTGATGCCAAATG+CGG 0.708786 7:-56838491 MsG0780039016.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTCAATAAAATAAATTA+AGG + Chr7:56832303-56832322 None:intergenic 10.0%
!! ATTATAAAATATAAATAGCT+AGG - Chr7:56837485-56837504 MsG0780039016.01.T01:intron 10.0%
!! ATTAATGACAAAAAAAACTT+AGG + Chr7:56832746-56832765 None:intergenic 15.0%
!! ATTTCTAAATAAAGGAAATA+AGG + Chr7:56836393-56836412 None:intergenic 15.0%
!! TAAAATAAATTAAGGTCAAA+TGG + Chr7:56832295-56832314 None:intergenic 15.0%
!! TAAAGATAATATACAAACAA+GGG + Chr7:56838502-56838521 None:intergenic 15.0%
!! TACTTACAAAAAATATGTAA+GGG + Chr7:56833507-56833526 None:intergenic 15.0%
!! TAGTTTCTATAATTTAGAAA+AGG - Chr7:56833441-56833460 MsG0780039016.01.T01:intron 15.0%
!! TTATAAAAATATTAGATGAC+TGG - Chr7:56838678-56838697 MsG0780039016.01.T01:CDS 15.0%
!! TTTGAGTAAATTAAAATAGT+TGG + Chr7:56838634-56838653 None:intergenic 15.0%
!!! AAGTTTTTATACATAAACAT+AGG + Chr7:56836739-56836758 None:intergenic 15.0%
!!! AGTAATTTAAAATGAACAAA+AGG - Chr7:56838829-56838848 MsG0780039016.01.T01:CDS 15.0%
!!! ATTGTAATTCATTTTAAGTA+TGG + Chr7:56834015-56834034 None:intergenic 15.0%
!!! GAGTATTATAATTTTAATGT+AGG + Chr7:56838316-56838335 None:intergenic 15.0%
!!! TTAAAAGTTTTAGAATAATC+CGG + Chr7:56836962-56836981 None:intergenic 15.0%
!!! TTCTAAAACTTTTAATTCAA+AGG - Chr7:56836967-56836986 MsG0780039016.01.T01:intron 15.0%
!!! TTGCTTTTTAAATATAAAGT+CGG + Chr7:56831906-56831925 None:intergenic 15.0%
!! AAGAATCAAAAATGTATTTG+TGG - Chr7:56831541-56831560 MsG0780039016.01.T01:intron 20.0%
!! AATAGAGATGGAATATTTAA+AGG - Chr7:56835501-56835520 MsG0780039016.01.T01:intron 20.0%
!! AATATTCATTCAGTACTATT+TGG + Chr7:56835297-56835316 None:intergenic 20.0%
!! AATTCAATATCAAATAGAGA+TGG - Chr7:56835489-56835508 MsG0780039016.01.T01:intron 20.0%
!! ACATTCTTCATATATAGAAA+AGG + Chr7:56836452-56836471 None:intergenic 20.0%
!! ATCATAGAAGAAAATTCAAT+AGG + Chr7:56832687-56832706 None:intergenic 20.0%
!! ATTCATAATTATATTGAGCT+GGG - Chr7:56834130-56834149 MsG0780039016.01.T01:intron 20.0%
!! CAAATACAAACAAAACAATT+AGG + Chr7:56835438-56835457 None:intergenic 20.0%
!! CTAAAGATAATATACAAACA+AGG + Chr7:56838503-56838522 None:intergenic 20.0%
!! CTACTTACAAAAAATATGTA+AGG + Chr7:56833508-56833527 None:intergenic 20.0%
!! CTTGTTTGTATATTATCTTT+AGG - Chr7:56838501-56838520 MsG0780039016.01.T01:CDS 20.0%
!! TCGAATCTTATTATATCTAT+GGG - Chr7:56834996-56835015 MsG0780039016.01.T01:intron 20.0%
!! TTATGAATCACAACAAAAAA+TGG + Chr7:56834118-56834137 None:intergenic 20.0%
!! TTTAATTGTTGTGAATTTGA+TGG - Chr7:56834157-56834176 MsG0780039016.01.T01:intron 20.0%
!!! AAATTCAACTTTTATCGTAT+CGG - Chr7:56831624-56831643 MsG0780039016.01.T01:intron 20.0%
!!! ACTGTTTCATCAATTTTTTT+AGG + Chr7:56833273-56833292 None:intergenic 20.0%
!!! ATATTGTTGATTTTGTTCAT+TGG - Chr7:56832853-56832872 MsG0780039016.01.T01:intron 20.0%
!!! CAATGTTTAATTTCATATTC+CGG + Chr7:56831438-56831457 None:intergenic 20.0%
!!! CTGTTTCATCAATTTTTTTA+GGG + Chr7:56833272-56833291 None:intergenic 20.0%
!!! TAAAAGTTTTAGAATAATCC+GGG + Chr7:56836961-56836980 None:intergenic 20.0%
!!! TGTTTCATCAATTTTTTTAG+GGG + Chr7:56833271-56833290 None:intergenic 20.0%
!!! TTATAATTTTCTGTAGGTAT+CGG + Chr7:56837900-56837919 None:intergenic 20.0%
!!! TTTTCCTTATAATTTTCTGT+AGG + Chr7:56837906-56837925 None:intergenic 20.0%
! AAAGGAAGAATCTAATGAAA+TGG - Chr7:56831982-56832001 MsG0780039016.01.T01:intron 25.0%
! AATGTTGAAGCAGTAAAATT+TGG - Chr7:56831301-56831320 MsG0780039016.01.T01:intron 25.0%
! ACTACAAGAAAATATGACAT+TGG - Chr7:56832214-56832233 MsG0780039016.01.T01:CDS 25.0%
! ACTATTTGACCATATATACT+TGG - Chr7:56835150-56835169 MsG0780039016.01.T01:CDS 25.0%
! AGTACTTATCCAAGTATATA+TGG + Chr7:56835162-56835181 None:intergenic 25.0%
! AGTTAATATCAGCAAAAAAG+AGG - Chr7:56831741-56831760 MsG0780039016.01.T01:intron 25.0%
! ATATACATACAGTTACCATA+TGG + Chr7:56838749-56838768 None:intergenic 25.0%
! ATATAGGGTAATCTAATAGA+TGG + Chr7:56836897-56836916 None:intergenic 25.0%
! ATATTAACTACCATTCAGTT+TGG + Chr7:56832257-56832276 None:intergenic 25.0%
! ATATTTGATATGGTAGTCAA+CGG - Chr7:56833621-56833640 MsG0780039016.01.T01:intron 25.0%
! ATGATTTATACTACACTACA+AGG - Chr7:56836776-56836795 MsG0780039016.01.T01:intron 25.0%
! ATTTGTAGAGTGATTGAAAA+TGG - Chr7:56838439-56838458 MsG0780039016.01.T01:CDS 25.0%
! CAAATATGAAAATAGTATGC+AGG + Chr7:56838541-56838560 None:intergenic 25.0%
! CCATAAAACATAATCTCATA+AGG + Chr7:56836836-56836855 None:intergenic 25.0%
! CGAATCTTATTATATCTATG+GGG - Chr7:56834997-56835016 MsG0780039016.01.T01:intron 25.0%
! CTACAAATTCCTTCAAAATT+TGG + Chr7:56838427-56838446 None:intergenic 25.0%
! GATACCTACAGAAAATTATA+AGG - Chr7:56837899-56837918 MsG0780039016.01.T01:intron 25.0%
! GATTCATAATTATATTGAGC+TGG - Chr7:56834129-56834148 MsG0780039016.01.T01:intron 25.0%
! GCTTGATATAATCATAGATA+CGG + Chr7:56833131-56833150 None:intergenic 25.0%
! GTCGAATCTTATTATATCTA+TGG - Chr7:56834995-56835014 MsG0780039016.01.T01:intron 25.0%
! GTTTAGCATGATTAATAATC+TGG + Chr7:56834813-56834832 None:intergenic 25.0%
! TACGTTGTTATGTATTATAG+CGG - Chr7:56837283-56837302 MsG0780039016.01.T01:intron 25.0%
! TATGGTAACTGTATGTATAT+TGG - Chr7:56838749-56838768 MsG0780039016.01.T01:CDS 25.0%
! TGAATCAGAAAATGTCTAAT+GGG + Chr7:56834656-56834675 None:intergenic 25.0%
! TGAGAAGGAAATATTTGATA+TGG - Chr7:56833611-56833630 MsG0780039016.01.T01:intron 25.0%
! TGATTTATACTACACTACAA+GGG - Chr7:56836777-56836796 MsG0780039016.01.T01:intron 25.0%
! TGTACATGCACATATAATAA+AGG + Chr7:56838941-56838960 None:intergenic 25.0%
! TTATTATATGTGCATGTACA+TGG - Chr7:56838941-56838960 MsG0780039016.01.T01:CDS 25.0%
! TTCATATCTTGAAAGAATGA+AGG - Chr7:56838049-56838068 MsG0780039016.01.T01:CDS 25.0%
! TTGAATCAGAAAATGTCTAA+TGG + Chr7:56834657-56834676 None:intergenic 25.0%
!! AAAATATGTAAGGGTATGTT+TGG + Chr7:56833498-56833517 None:intergenic 25.0%
!! AGTAGTACTAATTTTCCATA+TGG - Chr7:56838731-56838750 MsG0780039016.01.T01:CDS 25.0%
!! ATATATAGAAAAGGCTTTGT+TGG + Chr7:56836443-56836462 None:intergenic 25.0%
!! ATTTTGAATAGCATTTTGCT+AGG - Chr7:56837599-56837618 MsG0780039016.01.T01:intron 25.0%
!! CCTTATGAGATTATGTTTTA+TGG - Chr7:56836833-56836852 MsG0780039016.01.T01:intron 25.0%
!! GTATTAGTTTGAAAATAGCT+AGG - Chr7:56837621-56837640 MsG0780039016.01.T01:intron 25.0%
!! GTTGATTTAGATTTACTACT+AGG - Chr7:56832902-56832921 MsG0780039016.01.T01:intron 25.0%
!! TACTCATTTTCACTAACTAA+TGG - Chr7:56835339-56835358 MsG0780039016.01.T01:intron 25.0%
!! TTCATTTTGTCAAAACACAT+TGG - Chr7:56832351-56832370 MsG0780039016.01.T01:intron 25.0%
!!! AACATTAGCTTTTGCTTTTA+AGG - Chr7:56836624-56836643 MsG0780039016.01.T01:intron 25.0%
!!! AATCTGTTATTTTCTTGTAG+TGG - Chr7:56837808-56837827 MsG0780039016.01.T01:intron 25.0%
!!! AGAAGAGCATTTCTAAATAA+AGG + Chr7:56836401-56836420 None:intergenic 25.0%
!!! ATATTATCTTTAGGATTGAC+TGG - Chr7:56838510-56838529 MsG0780039016.01.T01:CDS 25.0%
!!! TATAATTTTAATGTAGGACG+AGG + Chr7:56838310-56838329 None:intergenic 25.0%
!!! TATACAGTTTGTTGAAAGAT+TGG - Chr7:56837036-56837055 MsG0780039016.01.T01:intron 25.0%
!!! TCAGTTTCATTTTTACAGAT+TGG - Chr7:56836185-56836204 MsG0780039016.01.T01:intron 25.0%
!!! TGAAGAATGTTTTAAACCAA+TGG - Chr7:56836462-56836481 MsG0780039016.01.T01:intron 25.0%
!!! TGATTACTTTTTCTTTGTCT+AGG - Chr7:56835648-56835667 MsG0780039016.01.T01:intron 25.0%
!!! TTGTTTTGTTTGTATTTGTC+AGG - Chr7:56835440-56835459 MsG0780039016.01.T01:intron 25.0%
!!! TTTTAAGTATGGAGAAATAG+TGG + Chr7:56834004-56834023 None:intergenic 25.0%
!!! TTTTAATTTACTCAAATCGC+TGG - Chr7:56838638-56838657 MsG0780039016.01.T01:CDS 25.0%
AAAATGAACAAAAGGTGAGA+AGG - Chr7:56838837-56838856 MsG0780039016.01.T01:CDS 30.0%
AAAGTTTACACTCTAAACCA+CGG + Chr7:56837243-56837262 None:intergenic 30.0%
AAATGAACAAAAGGTGAGAA+GGG - Chr7:56838838-56838857 MsG0780039016.01.T01:CDS 30.0%
AACATAATCTCATAAGGTCA+TGG + Chr7:56836830-56836849 None:intergenic 30.0%
AACATACAGTGAACTGTTTA+GGG - Chr7:56835859-56835878 MsG0780039016.01.T01:CDS 30.0%
AACTAGTAGCTACAATATGA+GGG + Chr7:56833814-56833833 None:intergenic 30.0%
AAGATATGAAATACCGTCAA+TGG + Chr7:56838039-56838058 None:intergenic 30.0%
AATTTGGTCTCTCTAAATGT+TGG + Chr7:56838411-56838430 None:intergenic 30.0%
ACAAGGGCTAAATATGTTAT+TGG + Chr7:56838486-56838505 None:intergenic 30.0%
ACAGCTAAATCACAACTAAA+TGG - Chr7:56837726-56837745 MsG0780039016.01.T01:intron 30.0%
ACCAAGAACTAAAAATTGCA+AGG + Chr7:56835547-56835566 None:intergenic 30.0%
ACTCAATCCTATAAACTCAT+GGG - Chr7:56831402-56831421 MsG0780039016.01.T01:intron 30.0%
AGGAAAATGTTCATCTCAAT+GGG - Chr7:56833742-56833761 MsG0780039016.01.T01:intron 30.0%
AGTCTGATTGTCATGATAAA+TGG + Chr7:56834264-56834283 None:intergenic 30.0%
ATAGGAATCAAATATGAACC+TGG + Chr7:56832669-56832688 None:intergenic 30.0%
ATATACACAAGTTGTTACGA+TGG - Chr7:56833567-56833586 MsG0780039016.01.T01:intron 30.0%
ATCAAATAACAGTAAGTACC+AGG + Chr7:56834060-56834079 None:intergenic 30.0%
ATCTTGATCAACAGTATCTA+TGG - Chr7:56831356-56831375 MsG0780039016.01.T01:intron 30.0%
ATGATGATAAGCAGAATGAT+AGG + Chr7:56835067-56835086 None:intergenic 30.0%
ATGCATATATGCAAGAGAAT+TGG + Chr7:56836491-56836510 None:intergenic 30.0%
ATTTATCATGACAATCAGAC+TGG - Chr7:56834263-56834282 MsG0780039016.01.T01:intron 30.0%
CAAAATATTTCCTAGCGAAT+TGG + Chr7:56837666-56837685 None:intergenic 30.0%
CAACCACATGAAATCAAATA+TGG + Chr7:56838187-56838206 None:intergenic 30.0%
CAATAACAATGTTAGAGCAT+AGG + Chr7:56835945-56835964 None:intergenic 30.0%
CGTTTGAATTTGAGGATTTA+AGG - Chr7:56832950-56832969 MsG0780039016.01.T01:intron 30.0%
CTAAATCACAACTAAATGGT+AGG - Chr7:56837730-56837749 MsG0780039016.01.T01:intron 30.0%
GAAAATTTAGTCCCAAGAAA+CGG - Chr7:56831935-56831954 MsG0780039016.01.T01:CDS 30.0%
GGTTCTCATATATCATGTTA+TGG - Chr7:56835564-56835583 MsG0780039016.01.T01:intron 30.0%
TACTATACTAACCAATGAAC+TGG + Chr7:56838272-56838291 None:intergenic 30.0%
TACTCAATCCTATAAACTCA+TGG - Chr7:56831401-56831420 MsG0780039016.01.T01:intron 30.0%
TAGATGACGATAATTCAGAT+CGG + Chr7:56832623-56832642 None:intergenic 30.0%
TAGGAAAATGTTCATCTCAA+TGG - Chr7:56833741-56833760 MsG0780039016.01.T01:intron 30.0%
TCAGTTTGGCAACAAATTAA+TGG + Chr7:56832243-56832262 None:intergenic 30.0%
TCATATGATCTAAGGGTAAT+GGG - Chr7:56838776-56838795 MsG0780039016.01.T01:CDS 30.0%
TCGAAAATTTGAACCAAGAT+CGG + Chr7:56832587-56832606 None:intergenic 30.0%
TGATATAATCATAGATACGG+AGG + Chr7:56833128-56833147 None:intergenic 30.0%
TGATCTTCTCAAATTGTCAT+TGG - Chr7:56831862-56831881 MsG0780039016.01.T01:intron 30.0%
TGCATATATGCAAGAGAATT+GGG + Chr7:56836490-56836509 None:intergenic 30.0%
TGGATGTTCATATGATCTAA+GGG - Chr7:56838769-56838788 MsG0780039016.01.T01:CDS 30.0%
TGTTGACAAAGGAACTAAAA+TGG - Chr7:56837085-56837104 MsG0780039016.01.T01:intron 30.0%
TTAAATATAAAGTCGGACAG+AGG + Chr7:56831899-56831918 None:intergenic 30.0%
TTAATCATGCTAAACCTTTG+TGG - Chr7:56834818-56834837 MsG0780039016.01.T01:intron 30.0%
TTATAGTTGCATAGCATACA+CGG + Chr7:56834614-56834633 None:intergenic 30.0%
TTCATATGATCTAAGGGTAA+TGG - Chr7:56838775-56838794 MsG0780039016.01.T01:CDS 30.0%
TTGCTTATAGTATGTTTGCA+TGG - Chr7:56833302-56833321 MsG0780039016.01.T01:intron 30.0%
TTGGATGTTCATATGATCTA+AGG - Chr7:56838768-56838787 MsG0780039016.01.T01:CDS 30.0%
! AAACTGTTTATATTTTGCCG+AGG - Chr7:56833686-56833705 MsG0780039016.01.T01:CDS 30.0%
! AACTGTTTATATTTTGCCGA+GGG - Chr7:56833687-56833706 MsG0780039016.01.T01:CDS 30.0%
! ATTTAAGTTTCCCAACTATC+TGG + Chr7:56837581-56837600 None:intergenic 30.0%
! CAAAGTTAGCATTAGAGTTT+TGG - Chr7:56831159-56831178 MsG0780039016.01.T01:CDS 30.0%
! TATGTTTGGATGAAGGTTTT+TGG + Chr7:56833484-56833503 None:intergenic 30.0%
! TCACCATATTTGATTTCATG+TGG - Chr7:56838181-56838200 MsG0780039016.01.T01:CDS 30.0%
! TGAGTTCAGACAAGTATTTT+AGG - Chr7:56832182-56832201 MsG0780039016.01.T01:CDS 30.0%
! TGATTTTGTTCATTGGCATT+TGG - Chr7:56832860-56832879 MsG0780039016.01.T01:intron 30.0%
! TTAGAGAGACCAAATTTTGA+AGG - Chr7:56838415-56838434 MsG0780039016.01.T01:intron 30.0%
! TTGTGACAATTTTTGTAGTG+TGG - Chr7:56836229-56836248 MsG0780039016.01.T01:intron 30.0%
!! AAGGAGCATTATATAATAGC+AGG - Chr7:56836300-56836319 MsG0780039016.01.T01:intron 30.0%
!! CAGATTTTGAGTAAAGAAGT+CGG - Chr7:56831589-56831608 MsG0780039016.01.T01:intron 30.0%
!! GTTTCATTTTTACAGATTGG+AGG - Chr7:56836188-56836207 MsG0780039016.01.T01:intron 30.0%
!! TAATTTGTTGCCAAACTGAA+TGG - Chr7:56832244-56832263 MsG0780039016.01.T01:CDS 30.0%
!! TAGGTGTTGATTTAGATTTG+TGG - Chr7:56832921-56832940 MsG0780039016.01.T01:intron 30.0%
!!! TAAAGAAGTCGGTTTTGTTA+AGG - Chr7:56831600-56831619 MsG0780039016.01.T01:intron 30.0%
!!! TCCTTGCAATTTTTAGTTCT+TGG - Chr7:56835543-56835562 MsG0780039016.01.T01:intron 30.0%
!!! TCGCTAGGAAATATTTTGAT+AGG - Chr7:56837668-56837687 MsG0780039016.01.T01:intron 30.0%
!!! TGTTTTAAGTTCTGTATGTC+TGG - Chr7:56835984-56836003 MsG0780039016.01.T01:intron 30.0%
AAACAGTTTGCCTCATTCTT+TGG + Chr7:56833675-56833694 None:intergenic 35.0%
AAACTTGTCATAACCGCATT+TGG + Chr7:56831667-56831686 None:intergenic 35.0%
AACACTATTGGTATATACCG+TGG - Chr7:56834215-56834234 MsG0780039016.01.T01:intron 35.0%
AAGAATTCGATTAGACCTTC+AGG + Chr7:56835034-56835053 None:intergenic 35.0%
ACGGACATATTATTTGACAC+TGG + Chr7:56834595-56834614 None:intergenic 35.0%
ACTGAAATATCTGCATTCCA+TGG + Chr7:56835384-56835403 None:intergenic 35.0%
AGAAAAACCTAGCGATAAGT+TGG + Chr7:56832717-56832736 None:intergenic 35.0%
AGAATTCGATTAGACCTTCA+GGG + Chr7:56835033-56835052 None:intergenic 35.0%
AGCTTCTTAACATTGCCTTT+AGG - Chr7:56831247-56831266 MsG0780039016.01.T01:intron 35.0%
AGGGTAATCTAATAGATGGA+GGG + Chr7:56836893-56836912 None:intergenic 35.0%
ATATACCAATAGTGTTGTCC+AGG + Chr7:56834211-56834230 None:intergenic 35.0%
ATATTAGTTGCCAATTCGCT+AGG - Chr7:56837653-56837672 MsG0780039016.01.T01:intron 35.0%
ATCATCTACATGCTCATTCT+TGG - Chr7:56834880-56834899 MsG0780039016.01.T01:intron 35.0%
CAAAGGAACTAAAATGGTCA+AGG - Chr7:56837091-56837110 MsG0780039016.01.T01:intron 35.0%
CAACATACAGTGAACTGTTT+AGG - Chr7:56835858-56835877 MsG0780039016.01.T01:CDS 35.0%
CACACTAATTCTTCAATCTG+TGG - Chr7:56831825-56831844 MsG0780039016.01.T01:intron 35.0%
CATATGATCTAAGGGTAATG+GGG - Chr7:56838777-56838796 MsG0780039016.01.T01:CDS 35.0%
CCCAAAAAATAACCAGAACA+GGG + Chr7:56836138-56836157 None:intergenic 35.0%
CGACTTCTTTACTCAAAATC+TGG + Chr7:56831591-56831610 None:intergenic 35.0%
CGGCATGCAAAATTGAAAAT+AGG - Chr7:56831500-56831519 MsG0780039016.01.T01:intron 35.0%
CTCAATCCTATAAACTCATG+GGG - Chr7:56831403-56831422 MsG0780039016.01.T01:intron 35.0%
CTTCAATCTGTGGTTTGAAT+AGG - Chr7:56831835-56831854 MsG0780039016.01.T01:intron 35.0%
GAAATCAGAACCAAGAATGT+AGG + Chr7:56836067-56836086 None:intergenic 35.0%
GAACTAGTAGCTACAATATG+AGG + Chr7:56833815-56833834 None:intergenic 35.0%
GAAGATACTACGAAATTGCT+AGG - Chr7:56837507-56837526 MsG0780039016.01.T01:intron 35.0%
GAGTGATTGAAAATGGAAGT+TGG - Chr7:56838446-56838465 MsG0780039016.01.T01:CDS 35.0%
GCTTCTTAACATTGCCTTTA+GGG - Chr7:56831248-56831267 MsG0780039016.01.T01:intron 35.0%
GTATTTGTCAGGTAACATGT+GGG - Chr7:56835451-56835470 MsG0780039016.01.T01:intron 35.0%
TAAGTACTTGTGAGACTGTT+TGG - Chr7:56835174-56835193 MsG0780039016.01.T01:CDS 35.0%
TACCTACAGTAGACCTAAAA+TGG + Chr7:56834485-56834504 None:intergenic 35.0%
TACGCTTGCACTATTCATAA+CGG + Chr7:56837358-56837377 None:intergenic 35.0%
TAGGGTAATCTAATAGATGG+AGG + Chr7:56836894-56836913 None:intergenic 35.0%
TATATACCGTGGAGTTAACT+TGG - Chr7:56834226-56834245 MsG0780039016.01.T01:intron 35.0%
TCAAAATCTGCCTTGACAAA+CGG - Chr7:56838240-56838259 MsG0780039016.01.T01:CDS 35.0%
TCAATCCTATAAACTCATGG+GGG - Chr7:56831404-56831423 MsG0780039016.01.T01:intron 35.0%
TCATGAATGGTGTGTAATCT+TGG - Chr7:56838874-56838893 MsG0780039016.01.T01:CDS 35.0%
TCTAATCGAATTCTTTCCCA+AGG - Chr7:56835039-56835058 MsG0780039016.01.T01:intron 35.0%
TCTGTCACCATAAACGTTAA+TGG + Chr7:56837990-56838009 None:intergenic 35.0%
TGAGGACATTAACTCACAAA+AGG - Chr7:56833897-56833916 MsG0780039016.01.T01:intron 35.0%
TGTATTTGTCAGGTAACATG+TGG - Chr7:56835450-56835469 MsG0780039016.01.T01:intron 35.0%
TGTGAATATGCTTACTCATG+TGG - Chr7:56834034-56834053 MsG0780039016.01.T01:intron 35.0%
TGTTGAGTAACATTCTGGTA+AGG + Chr7:56835625-56835644 None:intergenic 35.0%
TTAAGTTCTGTATGTCTGGT+TGG - Chr7:56835988-56836007 MsG0780039016.01.T01:intron 35.0%
TTACCAGAATGTTACTCAAC+AGG - Chr7:56835624-56835643 MsG0780039016.01.T01:intron 35.0%
TTATGGTAGTTGTCTACTGA+TGG - Chr7:56835581-56835600 MsG0780039016.01.T01:intron 35.0%
TTCACTCTATCAAAGTGTGT+CGG - Chr7:56831333-56831352 MsG0780039016.01.T01:intron 35.0%
TTGATAAACTTGCAGCATCA+AGG - Chr7:56837158-56837177 MsG0780039016.01.T01:intron 35.0%
TTGTGATTTAGCTGTCATAC+TGG + Chr7:56837721-56837740 None:intergenic 35.0%
TTTACCGATCTGTCATGAAA+AGG - Chr7:56834439-56834458 MsG0780039016.01.T01:intron 35.0%
TTTATACTACACTACAAGGG+TGG - Chr7:56836780-56836799 MsG0780039016.01.T01:intron 35.0%
TTTGTGAGTTAATGTCCTCA+GGG + Chr7:56833897-56833916 None:intergenic 35.0%
! AACAAGTTTTGCAGTTGTAG+TGG - Chr7:56836087-56836106 MsG0780039016.01.T01:intron 35.0%
! AAGGTTGTCAGAACCATTTT+AGG - Chr7:56834469-56834488 MsG0780039016.01.T01:intron 35.0%
! ATTTGATTTCATGTGGTTGC+AGG - Chr7:56838188-56838207 MsG0780039016.01.T01:CDS 35.0%
! ATTTTCTCCACGTCATTAAG+GGG + Chr7:56838077-56838096 None:intergenic 35.0%
! CATTTTCTCCACGTCATTAA+GGG + Chr7:56838078-56838097 None:intergenic 35.0%
! GAAATTTGAAGTTCTCACCA+TGG + Chr7:56832549-56832568 None:intergenic 35.0%
! GAAGTGTCAGTGCTAAATAA+AGG + Chr7:56834557-56834576 None:intergenic 35.0%
! TCAAAATCTGGAACGTTTCT+CGG + Chr7:56831579-56831598 None:intergenic 35.0%
! TCTACCTTTGGCTTCTTTAA+GGG + Chr7:56839011-56839030 None:intergenic 35.0%
! TGTTCATTGGCATTTGGAAT+TGG - Chr7:56832866-56832885 MsG0780039016.01.T01:intron 35.0%
! TTCTACCTTTGGCTTCTTTA+AGG + Chr7:56839012-56839031 None:intergenic 35.0%
! TTTGATTTCATGTGGTTGCA+GGG - Chr7:56838189-56838208 MsG0780039016.01.T01:CDS 35.0%
! TTTTGTGAGTTAATGTCCTC+AGG + Chr7:56833898-56833917 None:intergenic 35.0%
!! AACCATTTTAGGTCTACTGT+AGG - Chr7:56834480-56834499 MsG0780039016.01.T01:intron 35.0%
!! AGTTAGCATTAGAGTTTTGG+TGG - Chr7:56831162-56831181 MsG0780039016.01.T01:CDS 35.0%
!! CTAACTTTGTCACCTTGTTT+TGG + Chr7:56831148-56831167 None:intergenic 35.0%
!! GATTTTGTTTGTTGAAGCAG+AGG - Chr7:56832039-56832058 MsG0780039016.01.T01:intron 35.0%
!! GTTGAAAGATTGGTGATGAA+AGG - Chr7:56837046-56837065 MsG0780039016.01.T01:intron 35.0%
!! TCAATTTCAAGTTGTCGAGT+TGG - Chr7:56834696-56834715 MsG0780039016.01.T01:intron 35.0%
!!! CCCTGTTCTGGTTATTTTTT+GGG - Chr7:56836135-56836154 MsG0780039016.01.T01:intron 35.0%
!!! CCTGTTCTGGTTATTTTTTG+GGG - Chr7:56836136-56836155 MsG0780039016.01.T01:intron 35.0%
!!! TCCCTGTTCTGGTTATTTTT+TGG - Chr7:56836134-56836153 MsG0780039016.01.T01:intron 35.0%
AAAGACCTCATACCTTGTAG+TGG + Chr7:56833966-56833985 None:intergenic 40.0%
AAAGGACAGAAGTTGTGCTA+TGG - Chr7:56837210-56837229 MsG0780039016.01.T01:intron 40.0%
AACATCCTAGCCAGATAGTT+GGG - Chr7:56837568-56837587 MsG0780039016.01.T01:intron 40.0%
AAGAGAGTGACAGTCATGAA+TGG - Chr7:56838861-56838880 MsG0780039016.01.T01:CDS 40.0%
AAGCAGAATGATAGGTACCT+TGG + Chr7:56835059-56835078 None:intergenic 40.0%
AATATGCAACACTGCTCCTA+AGG + Chr7:56832104-56832123 None:intergenic 40.0%
AATGACAGTCAATCAGAGTG+TGG - Chr7:56835730-56835749 MsG0780039016.01.T01:CDS 40.0%
AATGGGATTTACGTGAAGCT+AGG - Chr7:56833759-56833778 MsG0780039016.01.T01:intron 40.0%
ACACACTCACACACAAACTA+AGG + Chr7:56831774-56831793 None:intergenic 40.0%
ACAGTGAACTGTTTAGGGAT+TGG - Chr7:56835864-56835883 MsG0780039016.01.T01:CDS 40.0%
ACGAAATTGCTAGGTACTTG+CGG - Chr7:56837516-56837535 MsG0780039016.01.T01:intron 40.0%
ACTAACCAATGAACTGGTTG+AGG + Chr7:56838266-56838285 None:intergenic 40.0%
ACTCCAATGTCATCCATTGA+CGG - Chr7:56838023-56838042 MsG0780039016.01.T01:intron 40.0%
AGAAAAGCCTCCTACATTCT+TGG - Chr7:56836054-56836073 MsG0780039016.01.T01:intron 40.0%
AGAGTTAGAATCAGAGCCTT+TGG + Chr7:56833235-56833254 None:intergenic 40.0%
AGCAGAATGATAGGTACCTT+GGG + Chr7:56835058-56835077 None:intergenic 40.0%
AGCATATCCACCAGAAATAG+GGG + Chr7:56837961-56837980 None:intergenic 40.0%
AGCTTACAAAAGAGAACCGT+TGG + Chr7:56832129-56832148 None:intergenic 40.0%
AGTCTTGCAATAGTCCCTAA+AGG + Chr7:56831265-56831284 None:intergenic 40.0%
AGTGCAAGGTGTGAGATATA+GGG + Chr7:56836912-56836931 None:intergenic 40.0%
ATACCGTCAATGGATGACAT+TGG + Chr7:56838029-56838048 None:intergenic 40.0%
ATATGCAACACTGCTCCTAA+GGG + Chr7:56832103-56832122 None:intergenic 40.0%
ATATTGCTACCATTACTGCG+AGG - Chr7:56835208-56835227 MsG0780039016.01.T01:intron 40.0%
ATCAAGGATGAAGATCTCGT+TGG - Chr7:56837174-56837193 MsG0780039016.01.T01:intron 40.0%
ATCAGAACCAAGAATGTAGG+AGG + Chr7:56836064-56836083 None:intergenic 40.0%
ATGACAATCAGACTGGAAGA+TGG - Chr7:56834270-56834289 MsG0780039016.01.T01:intron 40.0%
ATGTAGGACGAGGTTATGTT+TGG + Chr7:56838300-56838319 None:intergenic 40.0%
CAAGAAATATCGTCATCTGC+AGG - Chr7:56834396-56834415 MsG0780039016.01.T01:intron 40.0%
CAATCCTATAAACTCATGGG+GGG - Chr7:56831405-56831424 MsG0780039016.01.T01:intron 40.0%
CAGCATATCCACCAGAAATA+GGG + Chr7:56837962-56837981 None:intergenic 40.0%
CAGTGAACTGTTTAGGGATT+GGG - Chr7:56835865-56835884 MsG0780039016.01.T01:intron 40.0%
CAGTGTTGCATATTCTCCAA+CGG - Chr7:56832110-56832129 MsG0780039016.01.T01:CDS 40.0%
CATCCTGTTGAGTAACATTC+TGG + Chr7:56835630-56835649 None:intergenic 40.0%
CCCCAAAAAATAACCAGAAC+AGG + Chr7:56836139-56836158 None:intergenic 40.0%
CCTAATAGATCACAAATCCC+AGG + Chr7:56833858-56833877 None:intergenic 40.0%
CCTGGGATTTGTGATCTATT+AGG - Chr7:56833855-56833874 MsG0780039016.01.T01:intron 40.0%
CCTTAATGACGTGGAGAAAA+TGG - Chr7:56838076-56838095 MsG0780039016.01.T01:CDS 40.0%
CGTGATAAATCAGTGGTAGA+CGG + Chr7:56832503-56832522 None:intergenic 40.0%
CTACAATATGAGGGATTTGC+GGG + Chr7:56833805-56833824 None:intergenic 40.0%
CTTATTCATAAGTCTTCCGC+AGG - Chr7:56835701-56835720 MsG0780039016.01.T01:intron 40.0%
GAAAATCCCTCACCAAAACA+AGG - Chr7:56831133-56831152 MsG0780039016.01.T01:CDS 40.0%
GACTGAAGATGGTCTCATAA+TGG - Chr7:56834363-56834382 MsG0780039016.01.T01:intron 40.0%
GAGAAAATGGTGGTAGAGAT+TGG - Chr7:56838089-56838108 MsG0780039016.01.T01:CDS 40.0%
GAGATGGTAAGCACATAACA+AGG + Chr7:56837129-56837148 None:intergenic 40.0%
GATCCTAAATCCCCTATTTC+TGG - Chr7:56837948-56837967 MsG0780039016.01.T01:intron 40.0%
GCACATTGAAACACTGCTAT+TGG - Chr7:56836932-56836951 MsG0780039016.01.T01:intron 40.0%
GCAGATGACGATATTTCTTG+CGG + Chr7:56834396-56834415 None:intergenic 40.0%
GCATCCAGAAGGAGAAAAAT+GGG + Chr7:56833936-56833955 None:intergenic 40.0%
GCTACAATATGAGGGATTTG+CGG + Chr7:56833806-56833825 None:intergenic 40.0%
GGGATTTGTGATCTATTAGG+AGG - Chr7:56833858-56833877 MsG0780039016.01.T01:intron 40.0%
GGTGTTTGCGTTTGAATTTG+AGG - Chr7:56832942-56832961 MsG0780039016.01.T01:intron 40.0%
GTAATCTAATAGATGGAGGG+AGG + Chr7:56836890-56836909 None:intergenic 40.0%
GTCATGAAAAGGTCCTAGAA+AGG - Chr7:56834450-56834469 MsG0780039016.01.T01:intron 40.0%
GTTTATGGTGACAGATGACT+TGG - Chr7:56837995-56838014 MsG0780039016.01.T01:intron 40.0%
TAACATCCTAGCCAGATAGT+TGG - Chr7:56837567-56837586 MsG0780039016.01.T01:intron 40.0%
TAATGACGTGGAGAAAATGG+TGG - Chr7:56838079-56838098 MsG0780039016.01.T01:CDS 40.0%
TACTAACACGTCAACGCAAA+AGG + Chr7:56836710-56836729 None:intergenic 40.0%
TAGACCCTTAAAGAAGCCAA+AGG - Chr7:56839004-56839023 MsG0780039016.01.T01:CDS 40.0%
TATATGTGCATGTACATGGC+AGG - Chr7:56838945-56838964 MsG0780039016.01.T01:CDS 40.0%
TATCCTCCAAGTTAACTCCA+CGG + Chr7:56834235-56834254 None:intergenic 40.0%
TCATGACAGATCGGTAAAAC+AGG + Chr7:56834437-56834456 None:intergenic 40.0%
TCTTTCTGTGATGCCAAATG+CGG - Chr7:56831651-56831670 MsG0780039016.01.T01:intron 40.0%
TGCATCCAGAAGGAGAAAAA+TGG + Chr7:56833937-56833956 None:intergenic 40.0%
TGTTATCTCTTGATGTAGCC+TGG - Chr7:56834190-56834209 MsG0780039016.01.T01:intron 40.0%
TTAAATCTCCTCCAGAAGCA+TGG - Chr7:56831685-56831704 MsG0780039016.01.T01:intron 40.0%
TTATGTGCTTACCATCTCAG+AGG - Chr7:56837131-56837150 MsG0780039016.01.T01:intron 40.0%
TTCAAGCTCAAGTTCCTTCT+CGG + Chr7:56836263-56836282 None:intergenic 40.0%
TTCTGGTAAGGTAAACTGCA+CGG + Chr7:56835613-56835632 None:intergenic 40.0%
TTTAGTCCCAAGAAACGGAT+TGG - Chr7:56831940-56831959 MsG0780039016.01.T01:intron 40.0%
! AAACACAGTTCTGTTTGCTG+AGG - Chr7:56831195-56831214 MsG0780039016.01.T01:intron 40.0%
! AGGACCTTTTCATGACAGAT+CGG + Chr7:56834446-56834465 None:intergenic 40.0%
! AGTTTTCTCACTTTCCCCTT+AGG - Chr7:56832085-56832104 MsG0780039016.01.T01:CDS 40.0%
! CATTCTTCTGTTTTCTCTCC+AGG - Chr7:56832648-56832667 MsG0780039016.01.T01:intron 40.0%
! CCATTTTCTCCACGTCATTA+AGG + Chr7:56838079-56838098 None:intergenic 40.0%
! CGATGGACTTATTCGATTGA+TGG - Chr7:56833584-56833603 MsG0780039016.01.T01:intron 40.0%
! GTAAGGGTATGTTTGGATGA+AGG + Chr7:56833491-56833510 None:intergenic 40.0%
! GTTTGTCAAGGCAGATTTTG+AGG + Chr7:56838241-56838260 None:intergenic 40.0%
! TCACAGTCTTGTCACTGAAA+AGG - Chr7:56834303-56834322 MsG0780039016.01.T01:intron 40.0%
! TCTGTTTGGGATAACAGGAT+AGG - Chr7:56833722-56833741 MsG0780039016.01.T01:intron 40.0%
! TGGAGCACCATTAACGTTTA+TGG - Chr7:56837980-56837999 MsG0780039016.01.T01:intron 40.0%
! TTATATTTTGCCGAGGGTTC+CGG - Chr7:56833693-56833712 MsG0780039016.01.T01:CDS 40.0%
! TTATCAAAGTGCCTCTGAGA+TGG + Chr7:56837145-56837164 None:intergenic 40.0%
! TTTCTTTTTCCACGCCACAA+AGG + Chr7:56834835-56834854 None:intergenic 40.0%
!! AAGCTCAACTTGTTGAAGCA+AGG - Chr7:56836281-56836300 MsG0780039016.01.T01:intron 40.0%
!! ACTTTTGATTGTGCACACCA+TGG - Chr7:56835364-56835383 MsG0780039016.01.T01:intron 40.0%
!! ATGGTTCTGACAACCTTTCT+AGG + Chr7:56834466-56834485 None:intergenic 40.0%
!! CTGTAGGTATCGGTAATATC+TGG + Chr7:56837890-56837909 None:intergenic 40.0%
!! GTTTGGATGAAGGTTTTTGG+AGG + Chr7:56833481-56833500 None:intergenic 40.0%
!! TTGGTGATGAAAGGACATTC+AGG - Chr7:56837055-56837074 MsG0780039016.01.T01:intron 40.0%
!!! TTGTCACCTTGTTTTGGTGA+GGG + Chr7:56831142-56831161 None:intergenic 40.0%
!!! TTTGTCACCTTGTTTTGGTG+AGG + Chr7:56831143-56831162 None:intergenic 40.0%
AAACACTGCTATTGGAGACC+CGG - Chr7:56836940-56836959 MsG0780039016.01.T01:intron 45.0%
AAGAACTCGAGGTAACAGCT+GGG - Chr7:56834341-56834360 MsG0780039016.01.T01:intron 45.0%
AAGGATGAAGATCTCGTTGG+AGG - Chr7:56837177-56837196 MsG0780039016.01.T01:intron 45.0%
AAGGTCTCGAATTTGAGTCG+TGG + Chr7:56834538-56834557 None:intergenic 45.0%
AGTTTCCCAACTATCTGGCT+AGG + Chr7:56837576-56837595 None:intergenic 45.0%
ATATGCTTACTCATGTGGCC+TGG - Chr7:56834039-56834058 MsG0780039016.01.T01:intron 45.0%
ATTGGCCAGATGGAGGTAAA+AGG - Chr7:56838107-56838126 MsG0780039016.01.T01:CDS 45.0%
CAACCTCCAATCCGTTTCTT+GGG + Chr7:56831949-56831968 None:intergenic 45.0%
CAGTGCAAGGTGTGAGATAT+AGG + Chr7:56836913-56836932 None:intergenic 45.0%
CAGTTCGCAACTCTCTACAT+TGG + Chr7:56835804-56835823 None:intergenic 45.0%
CATCTCTGTGCAACTGTGTA+AGG - Chr7:56836508-56836527 MsG0780039016.01.T01:intron 45.0%
CCACCAGAAATAGGGGATTT+AGG + Chr7:56837954-56837973 None:intergenic 45.0%
CCAGCATATCCACCAGAAAT+AGG + Chr7:56837963-56837982 None:intergenic 45.0%
CTACTACCTCTGTGAGAACA+CGG - Chr7:56831480-56831499 MsG0780039016.01.T01:intron 45.0%
CTAGAATGTGATCCCTGTTC+TGG - Chr7:56836123-56836142 MsG0780039016.01.T01:intron 45.0%
CTCATTCTTTGGCTGTGAGA+GGG + Chr7:56833664-56833683 None:intergenic 45.0%
GAACTGTTTAGGGATTGGGA+TGG - Chr7:56835869-56835888 MsG0780039016.01.T01:intron 45.0%
GACTGTCATTAGTGTTCCTG+CGG + Chr7:56835720-56835739 None:intergenic 45.0%
GAGTTCAGATTGAGCGGAAA+TGG + Chr7:56837862-56837881 None:intergenic 45.0%
GATAAATCAGTGGTAGACGG+TGG + Chr7:56832500-56832519 None:intergenic 45.0%
GCAAGAGAATTGGGTACCAT+TGG + Chr7:56836481-56836500 None:intergenic 45.0%
GGCAGACGTTAACAACTCAT+TGG - Chr7:56836988-56837007 MsG0780039016.01.T01:intron 45.0%
GGTATTCCACCAGATTCCAA+AGG - Chr7:56833216-56833235 MsG0780039016.01.T01:intron 45.0%
GTAAGGTAAACTGCACGGTT+CGG + Chr7:56835608-56835627 None:intergenic 45.0%
GTGTTTCAATGTGCAGTGCA+AGG + Chr7:56836926-56836945 None:intergenic 45.0%
GTTCCTGAGTTCAGATTGAG+CGG + Chr7:56837868-56837887 None:intergenic 45.0%
GTTGGAGGACAAGTTGTGAA+AGG - Chr7:56837192-56837211 MsG0780039016.01.T01:intron 45.0%
TAAGCCCCCCATGAGTTTAT+AGG + Chr7:56831412-56831431 None:intergenic 45.0%
TATGCAACACTGCTCCTAAG+GGG + Chr7:56832102-56832121 None:intergenic 45.0%
TCAGATTGAGCGGAAATGGT+AGG + Chr7:56837858-56837877 None:intergenic 45.0%
TCGTTCTCCAACTTATCGCT+AGG - Chr7:56832707-56832726 MsG0780039016.01.T01:intron 45.0%
TCTATGGTCAGACACATGCA+AGG - Chr7:56831372-56831391 MsG0780039016.01.T01:intron 45.0%
TGGTGTGTAATCTTGGTCAC+TGG - Chr7:56838881-56838900 MsG0780039016.01.T01:CDS 45.0%
TGTAGCCTGGACAACACTAT+TGG - Chr7:56834203-56834222 MsG0780039016.01.T01:intron 45.0%
TTGGCCAGATGGAGGTAAAA+GGG - Chr7:56838108-56838127 MsG0780039016.01.T01:CDS 45.0%
TTTCCGCTCAATCTGAACTC+AGG - Chr7:56837862-56837881 MsG0780039016.01.T01:intron 45.0%
! ATACCGTGGAGTTAACTTGG+AGG - Chr7:56834229-56834248 MsG0780039016.01.T01:intron 45.0%
! GATGATTTTCCATCACGCTG+TGG - Chr7:56833179-56833198 MsG0780039016.01.T01:intron 45.0%
! GTCTGTCTGTTTGGGATAAC+AGG - Chr7:56833717-56833736 MsG0780039016.01.T01:CDS 45.0%
! TATATTTTGCCGAGGGTTCC+GGG - Chr7:56833694-56833713 MsG0780039016.01.T01:CDS 45.0%
! TCGATTGATGGATGCTGAGA+AGG - Chr7:56833596-56833615 MsG0780039016.01.T01:intron 45.0%
! TCTGTTTGCTGAGGCAGATA+AGG - Chr7:56831204-56831223 MsG0780039016.01.T01:intron 45.0%
! TGGTTGAGTTGCTAAGCTGA+AGG - Chr7:56836008-56836027 MsG0780039016.01.T01:intron 45.0%
! TTTCTGAGAGCACGTGAGTT+TGG + Chr7:56832386-56832405 None:intergenic 45.0%
!! CAAGAAACGGATTGGAGGTT+GGG - Chr7:56831948-56831967 MsG0780039016.01.T01:intron 45.0%
!! CAGGCTCTTGTTGTTGACAA+AGG - Chr7:56837074-56837093 MsG0780039016.01.T01:intron 45.0%
!! CCTAAATCCCCTATTTCTGG+TGG - Chr7:56837951-56837970 MsG0780039016.01.T01:intron 45.0%
!! CCTATTTCTGGTGGATATGC+TGG - Chr7:56837960-56837979 MsG0780039016.01.T01:intron 45.0%
!! GAATCAGAGCCTTTGGAATC+TGG + Chr7:56833228-56833247 None:intergenic 45.0%
!! TCAGCCCATTTTTCTCCTTC+TGG - Chr7:56833929-56833948 MsG0780039016.01.T01:intron 45.0%
!! TCTAAGGGTAATGGGGAGTA+AGG - Chr7:56838784-56838803 MsG0780039016.01.T01:CDS 45.0%
!! TTCCATTGACTCCATGCTTC+TGG + Chr7:56831699-56831718 None:intergenic 45.0%
AACGGCCTCAACCAGTTCAT+TGG - Chr7:56838258-56838277 MsG0780039016.01.T01:CDS 50.0%
ACACGTTATCGCTGAGAGTG+TGG + Chr7:56832413-56832432 None:intergenic 50.0%
ACAGAGGTAGTAGGACTGGA+AGG + Chr7:56831473-56831492 None:intergenic 50.0%
ACCATTACTGCGAGGTACAC+CGG - Chr7:56835216-56835235 MsG0780039016.01.T01:intron 50.0%
ACGTCAACGCAAAAGGCTAC+AGG + Chr7:56836703-56836722 None:intergenic 50.0%
AGGGACTATTGCAAGACTCG+TGG - Chr7:56831267-56831286 MsG0780039016.01.T01:intron 50.0%
ATACTGGCCGTAGCATGGAT+TGG + Chr7:56837705-56837724 None:intergenic 50.0%
CAGAGGTAGTAGGACTGGAA+GGG + Chr7:56831472-56831491 None:intergenic 50.0%
CATGCTAAACCTTTGTGGCG+TGG - Chr7:56834823-56834842 MsG0780039016.01.T01:intron 50.0%
CCAACCTCCAATCCGTTTCT+TGG + Chr7:56831950-56831969 None:intergenic 50.0%
CCAGGTACATGCAGTTCCAT+CGG + Chr7:56833840-56833859 None:intergenic 50.0%
CCTCATACCTTGTAGTGGCA+AGG + Chr7:56833961-56833980 None:intergenic 50.0%
CCTCATTCTTTGGCTGTGAG+AGG + Chr7:56833665-56833684 None:intergenic 50.0%
CCTCTCACAGCCAAAGAATG+AGG - Chr7:56833662-56833681 MsG0780039016.01.T01:CDS 50.0%
CCTTGCCACTACAAGGTATG+AGG - Chr7:56833958-56833977 MsG0780039016.01.T01:intron 50.0%
CGATGGAACTGCATGTACCT+GGG - Chr7:56833838-56833857 MsG0780039016.01.T01:intron 50.0%
CGTGTTCTCACAGAGGTAGT+AGG + Chr7:56831482-56831501 None:intergenic 50.0%
CTTTCCTGACGAAGAACTCG+AGG - Chr7:56834330-56834349 MsG0780039016.01.T01:intron 50.0%
GAAGAACTCGAGGTAACAGC+TGG - Chr7:56834340-56834359 MsG0780039016.01.T01:intron 50.0%
GAAGGTTCCCCTTAATGACG+TGG - Chr7:56838067-56838086 MsG0780039016.01.T01:CDS 50.0%
GACAGTCAATCAGAGTGTGG+CGG - Chr7:56835733-56835752 MsG0780039016.01.T01:CDS 50.0%
GACGGAGCGTGATAAATCAG+TGG + Chr7:56832510-56832529 None:intergenic 50.0%
GGAATCTGGTGGAATACCTC+TGG + Chr7:56833214-56833233 None:intergenic 50.0%
GGCAGGAAGTAGATCTGTTC+AGG - Chr7:56838962-56838981 MsG0780039016.01.T01:CDS 50.0%
GGGGTCATTCTTATCCCTGA+AGG - Chr7:56835016-56835035 MsG0780039016.01.T01:intron 50.0%
GTAACAGCTGGGACTGAAGA+TGG - Chr7:56834352-56834371 MsG0780039016.01.T01:intron 50.0%
GTAGCTACTAGTTCCTCCGA+TGG - Chr7:56833821-56833840 MsG0780039016.01.T01:intron 50.0%
GTGTGTGTGTGTGTGTGTGT+GGG - Chr7:56835247-56835266 MsG0780039016.01.T01:intron 50.0%
GTTACCTCGAGTTCTTCGTC+AGG + Chr7:56834337-56834356 None:intergenic 50.0%
GTTGCTAGCTGCTATAGCAG+AGG - Chr7:56836601-56836620 MsG0780039016.01.T01:intron 50.0%
TACTGGCCGTAGCATGGATT+GGG + Chr7:56837704-56837723 None:intergenic 50.0%
TAGACGGTGGTGATCGATGA+GGG + Chr7:56832487-56832506 None:intergenic 50.0%
TATCCCAAACAGACAGACCC+CGG + Chr7:56833715-56833734 None:intergenic 50.0%
TCAAGTTCCTTCTCGGTAGC+TGG + Chr7:56836256-56836275 None:intergenic 50.0%
TCACCATGGAGCTGAGAGAT+CGG + Chr7:56832535-56832554 None:intergenic 50.0%
TCTCACAGAGGTAGTAGGAC+TGG + Chr7:56831477-56831496 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGTG+GGG - Chr7:56835248-56835267 MsG0780039016.01.T01:intron 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG - Chr7:56835248-56835267 MsG0780039016.01.T01:intron 50.0%
TTGAACCAAGATCGGAGACG+CGG + Chr7:56832579-56832598 None:intergenic 50.0%
! ATATTTTGCCGAGGGTTCCG+GGG - Chr7:56833695-56833714 MsG0780039016.01.T01:CDS 50.0%
! CACTCCCTTTTACCTCCATC+TGG + Chr7:56838115-56838134 None:intergenic 50.0%
! CTCCAGAAGCATGGAGTCAA+TGG - Chr7:56831694-56831713 MsG0780039016.01.T01:intron 50.0%
! GATTTTCCATCACGCTGTGG+AGG - Chr7:56833182-56833201 MsG0780039016.01.T01:intron 50.0%
! GGTTGGGATTGGTAGAGGAA+AGG - Chr7:56831964-56831983 MsG0780039016.01.T01:intron 50.0%
! TTGGAGGTTGGGATTGGTAG+AGG - Chr7:56831959-56831978 MsG0780039016.01.T01:intron 50.0%
!! AACGGATTGGAGGTTGGGAT+TGG - Chr7:56831953-56831972 MsG0780039016.01.T01:intron 50.0%
!! AGTCCCAAGAAACGGATTGG+AGG - Chr7:56831943-56831962 MsG0780039016.01.T01:intron 50.0%
!! CATTGACTCCATGCTTCTGG+AGG + Chr7:56831696-56831715 None:intergenic 50.0%
!! CCAAGAAACGGATTGGAGGT+TGG - Chr7:56831947-56831966 MsG0780039016.01.T01:intron 50.0%
!! TCAGAGCCTTTGGAATCTGG+TGG + Chr7:56833225-56833244 None:intergenic 50.0%
ACTCATGGGGGGCTTATTGC+CGG - Chr7:56831416-56831435 MsG0780039016.01.T01:intron 55.0%
CACCATGGAGCTGAGAGATC+GGG + Chr7:56832534-56832553 None:intergenic 55.0%
CCGATGGAACTGCATGTACC+TGG - Chr7:56833837-56833856 MsG0780039016.01.T01:intron 55.0%
CTGGTTGAGGCCGTTTGTCA+AGG + Chr7:56838253-56838272 None:intergenic 55.0%
CTGTCATACTGGCCGTAGCA+TGG + Chr7:56837710-56837729 None:intergenic 55.0%
GAGACGGTGGTGATCGATGA+GGG + Chr7:56832465-56832484 None:intergenic 55.0%
GATGCAGCCTTGCCACTACA+AGG - Chr7:56833951-56833970 MsG0780039016.01.T01:intron 55.0%
GGTACATGCAGTTCCATCGG+AGG + Chr7:56833837-56833856 None:intergenic 55.0%
GTAGACGGTGGTGATCGATG+AGG + Chr7:56832488-56832507 None:intergenic 55.0%
GTCCTCAGGGTTGTGTGCTT+AGG + Chr7:56833884-56833903 None:intergenic 55.0%
GTGGTGATCGATGAGGGAGA+CGG + Chr7:56832459-56832478 None:intergenic 55.0%
GTTCCGGGGTCTGTCTGTTT+GGG - Chr7:56833709-56833728 MsG0780039016.01.T01:CDS 55.0%
TCCGGTGTACCTCGCAGTAA+TGG + Chr7:56835220-56835239 None:intergenic 55.0%
TGCATGCCGTGTTCTCACAG+AGG + Chr7:56831489-56831508 None:intergenic 55.0%
TTCCAACCTCCACAGCGTGA+TGG + Chr7:56833191-56833210 None:intergenic 55.0%
TTCCATCACGCTGTGGAGGT+TGG - Chr7:56833186-56833205 MsG0780039016.01.T01:intron 55.0%
TTGCCGCCCAATCCATGCTA+CGG - Chr7:56837695-56837714 MsG0780039016.01.T01:intron 55.0%
! GGTAGAGATTGGCCAGATGG+AGG - Chr7:56838100-56838119 MsG0780039016.01.T01:CDS 55.0%
! GGTGGTAGAGATTGGCCAGA+TGG - Chr7:56838097-56838116 MsG0780039016.01.T01:CDS 55.0%
ACTGCGAGGTACACCGGAGT+GGG - Chr7:56835222-56835241 MsG0780039016.01.T01:intron 60.0%
ATGAGGGAGACGGTGGCGAT+CGG + Chr7:56832449-56832468 None:intergenic 60.0%
CAAGATCGGAGACGCGGCAT+CGG + Chr7:56832573-56832592 None:intergenic 60.0%
CTCCCGATCTCTCAGCTCCA+TGG - Chr7:56832529-56832548 MsG0780039016.01.T01:intron 60.0%
GCTGTGGAGGTTGGAACCAG+AGG - Chr7:56833195-56833214 MsG0780039016.01.T01:intron 60.0%
GGAGACGGTGGTGATCGATG+AGG + Chr7:56832466-56832485 None:intergenic 60.0%
GGAGCTGAGAGATCGGGAGA+CGG + Chr7:56832528-56832547 None:intergenic 60.0%
GGCCTAAGCACACAACCCTG+AGG - Chr7:56833879-56833898 MsG0780039016.01.T01:intron 60.0%
GGTTCCGGGGTCTGTCTGTT+TGG - Chr7:56833708-56833727 MsG0780039016.01.T01:CDS 60.0%
GTGATCGATGAGGGAGACGG+TGG + Chr7:56832456-56832475 None:intergenic 60.0%
GTGGCAAGGCTGCATCCAGA+AGG + Chr7:56833947-56833966 None:intergenic 60.0%
GTGTGGTCCAGCTACCGAGA+AGG - Chr7:56836246-56836265 MsG0780039016.01.T01:intron 60.0%
GTGTGTGTGTGTGGGGTGTG+TGG - Chr7:56835263-56835282 MsG0780039016.01.T01:intron 60.0%
TACTGCGAGGTACACCGGAG+TGG - Chr7:56835221-56835240 MsG0780039016.01.T01:intron 60.0%
TGTGCTATGGCTCGTCTCCG+TGG - Chr7:56837223-56837242 MsG0780039016.01.T01:intron 60.0%
!! TGGCCGTAGCATGGATTGGG+CGG + Chr7:56837701-56837720 None:intergenic 60.0%
AGACGGTGGCGATCGGTGAC+GGG + Chr7:56832442-56832461 None:intergenic 65.0%
CACACACACACCCCCCACTC+CGG + Chr7:56835238-56835257 None:intergenic 65.0%
CAGACAGACCCCGGAACCCT+CGG + Chr7:56833706-56833725 None:intergenic 65.0%
CGATGCCGCGTCTCCGATCT+TGG - Chr7:56832571-56832590 MsG0780039016.01.T01:intron 65.0%
CTGCGAGGTACACCGGAGTG+GGG - Chr7:56835223-56835242 MsG0780039016.01.T01:intron 65.0%
GAGACGGTGGCGATCGGTGA+CGG + Chr7:56832443-56832462 None:intergenic 65.0%
TGCGAGGTACACCGGAGTGG+GGG - Chr7:56835224-56835243 MsG0780039016.01.T01:intron 65.0%
GCGAGGTACACCGGAGTGGG+GGG - Chr7:56835225-56835244 MsG0780039016.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 56831127 56839037 56831127 ID=MsG0780039016.01;Name=MsG0780039016.01
Chr7 mRNA 56831127 56839037 56831127 ID=MsG0780039016.01.T01;Parent=MsG0780039016.01;Name=MsG0780039016.01.T01;_AED=0.50;_eAED=0.61;_QI=0|0|0|1|0.7|0.72|11|0|629
Chr7 exon 56838423 56839037 56838423 ID=MsG0780039016.01.T01:exon:8170;Parent=MsG0780039016.01.T01
Chr7 exon 56838033 56838307 56838033 ID=MsG0780039016.01.T01:exon:8169;Parent=MsG0780039016.01.T01
Chr7 exon 56836313 56836425 56836313 ID=MsG0780039016.01.T01:exon:8168;Parent=MsG0780039016.01.T01
Chr7 exon 56835728 56835883 56835728 ID=MsG0780039016.01.T01:exon:8167;Parent=MsG0780039016.01.T01
Chr7 exon 56835104 56835201 56835104 ID=MsG0780039016.01.T01:exon:8166;Parent=MsG0780039016.01.T01
Chr7 exon 56834642 56834702 56834642 ID=MsG0780039016.01.T01:exon:8165;Parent=MsG0780039016.01.T01
Chr7 exon 56833640 56833739 56833640 ID=MsG0780039016.01.T01:exon:8164;Parent=MsG0780039016.01.T01
Chr7 exon 56833519 56833555 56833519 ID=MsG0780039016.01.T01:exon:8163;Parent=MsG0780039016.01.T01
Chr7 exon 56832043 56832336 56832043 ID=MsG0780039016.01.T01:exon:8162;Parent=MsG0780039016.01.T01
Chr7 exon 56831885 56831954 56831885 ID=MsG0780039016.01.T01:exon:8161;Parent=MsG0780039016.01.T01
Chr7 exon 56831127 56831197 56831127 ID=MsG0780039016.01.T01:exon:8160;Parent=MsG0780039016.01.T01
Chr7 CDS 56838423 56839037 56838423 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56838033 56838307 56838033 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56836313 56836425 56836313 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56835728 56835883 56835728 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56835104 56835201 56835104 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56834642 56834702 56834642 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56833640 56833739 56833640 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56833519 56833555 56833519 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56832043 56832336 56832043 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56831885 56831954 56831885 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Chr7 CDS 56831127 56831197 56831127 ID=MsG0780039016.01.T01:cds;Parent=MsG0780039016.01.T01
Gene Sequence

>MsG0780039016.01.T01

ATGGCTGAAAATCCCTCACCAAAACAAGGTGACAAAGTTAGCATTAGAGTTTTGGTGGAAAAGAAGAAAAACACAGTTCTGTTTGCTGAGGCAGATAAGGATTTTGTTGATGTTCTTTTCAGCTTCTTAACATTGCCTTTAGGGACTATTGCAAGACTCGTGGCTAAAGAGTCAAATGTTGAAGCAGTAAAATTTGGCAGCATTAGTTCACTCTATCAAAGTGTGTCGGATCTTGATCAACAGTATCTATGGTCAGACACATGCAAGGAAATGCTACTCAATCCTATAAACTCATGGGGGGCTTATTGCCGGAATATGAAATTAAACATTGATGATACTGAGCCCTTCCAGTCCTACTACCTCTGTGAGAACACGGCATGCAAAATTGAAAATAGGTACTGTGTGAGTCACTTTAAGAATCAAAAATGTATTTGTGGAAAAATGTTGAACCGAGAAACGTTCCAGATTTTGAGTAAAGAAGTCGGTTTTGTTAAGGAAAATTCAACTTTTATCGTATCGGATGATCTTTCTGTGATGCCAAATGCGGTTATGACAAGTTTAAATCTCCTCCAGAAGCATGGAGTCAATGGAATCAATGCTATTGATAAACAAACAGTACTTGATCTTCTCAAATTGTCATTGGTTTCAAAAACTCCTCTGTCCGACTTTATATTTAAAAAGCAACAATTTGTTGAAAATTTAGTCCCAAGAAACGGATTGGAGGTTGGGATTGGTAGAGGAAAGGAAGAATCTAATGAAATGGTTGTGAAAGTACTGAGAAGAAAATCAAATGAACAGATTTTGTTTGTTGAAGCAGAGGAAGATTTTGCTGACTTTGTTTTTAGTTTTCTCACTTTCCCCTTAGGAGCAGTGTTGCATATTCTCCAACGGATAGGAAAATGTTCATCTCAATGGGATTTACGTGAAGCTAGGATTAATACAATAGATTTCAACCCGCAAATCCCTCATATTGTAGCTACTAGTTCCTCCGATGGAACTGCATACTGGAAGATGGATTTCAACTTTCACAGTCTTGTCACTGAAAAGGAGAGCTTTCCTGACGAAGAACTCGAGGTAACAGCTGGGACTGAAGATGGTCTCATAATGGATGTTCGCCGCAAGAAATATCGTCATCTGCAGGTAATAACTTATTCTTCCTATTACTACATTGCAGATCTTATCTGTAAAAGAGTCGAATCTTATTATATCTATGGGGTCATTCTTATCCCTGAAGGTCTAATCGAATTCTTTCCCAAGGTAACATGTGGGAATTCAAACAAGCTAAATTCAATATCAAATAGAGATGGAATATTTAAAGATGTTTTCAATCGAACCAACAAAGCCTTTTCTATATATGAAGAATGTTTTAAACCAATGGTACCCAATTCTCTTGCATATATGCATCTCTGTGCAACTGTCTGCTATAGCAGAGGAACATTAGCTTTTGCTTTTAAGTGGTTTTTCAAAGACATACTAACTAGTCCTACCATTTCCGCTCAATCTGAACTCAGGAACCAGATATTACCGATACCTACAGAAAATTATAAGGAAAAAAATATGTCATTTGAATTTGTTGATCCTAAATCCCCTATTTCTGGTGGATATGCTGGAGCACCATTAACGTTTATGGTGACAGATGACTTGGTTGTGACTCCAATGTCATCCATTGACGGTATTTCATATCTTGAAAGAATGAAGGTTCCCCTTAATGACGTGGAGAAAATGGTGGTAGAGATTGGCCAGATGGAGGGTCTCAGCATACTTAGAGCTTCATTGACCTCAAAATCTGCCTTGACAAACGGCCTCAACCAGTTCATTGGAAGTAGATCTGTTCAGGCTAATTTGTCATCTAATGCTAGACCCTTAAAGAAGCCAAAGGTAGAAAAATGA
Protein sequence

>MsG0780039016.01.T01

MAENPSPKQGDKVSIRVLVEKKKNTVLFAEADKDFVDVLFSFLTLPLGTIARLVAKESNVEAVKFGSISSLYQSVSDLDQQYLWSDTCKEMLLNPINSWGAYCRNMKLNIDDTEPFQSYYLCENTACKIENRYCVSHFKNQKCICGKMLNRETFQILSKEVGFVKENSTFIVSDDLSVMPNAVMTSLNLLQKHGVNGINAIDKQTVLDLLKLSLVSKTPLSDFIFKKQQFVENLVPRNGLEVGIGRGKEESNEMVVKVLRRKSNEQILFVEAEEDFADFVFSFLTFPLGAVLHILQRIGKCSSQWDLREARINTIDFNPQIPHIVATSSSDGTAYWKMDFNFHSLVTEKESFPDEELEVTAGTEDGLIMDVRRKKYRHLQVITYSSYYYIADLICKRVESYYIYGVILIPEGLIEFFPKVTCGNSNKLNSISNRDGIFKDVFNRTNKAFSIYEECFKPMVPNSLAYMHLCATVCYSRGTLAFAFKWFFKDILTSPTISAQSELRNQILPIPTENYKEKNMSFEFVDPKSPISGGYAGAPLTFMVTDDLVVTPMSSIDGISYLERMKVPLNDVEKMVVEIGQMEGLSILRASLTSKSALTNGLNQFIGSRSVQANLSSNARPLKKPKVEK*