AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039842.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039842.01.T01 MTR_7g080290 96.727 275 9 0 1 275 1 275 0.0 524
MsG0780039842.01.T01 MTR_6g015020 55.046 218 88 5 64 274 62 276 3.41e-62 197
MsG0780039842.01.T01 MTR_7g013100 52.423 227 88 4 64 274 63 285 1.29e-58 189
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039842.01.T01 AT5G16390 47.931 290 122 6 2 275 3 279 2.10e-71 221
MsG0780039842.01.T01 AT5G15530 50.661 227 85 5 57 274 45 253 6.52e-62 196
MsG0780039842.01.T01 AT5G16390 46.183 262 112 6 2 247 3 251 4.76e-55 178

Find 91 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACATCTGATTTGGCTTT+AGG 0.237476 7:+69631587 None:intergenic
TTCAGTTTCAGTTTGATTCA+TGG 0.252370 7:-69632619 MsG0780039842.01.T01:exon
CGGTGGTTCAACATCTGATT+TGG 0.261689 7:+69631580 None:intergenic
CTTACAGTATCAACGCTTAC+AGG 0.270452 7:+69627284 None:intergenic
GAATGTTTACCTCATTTAAC+TGG 0.275310 7:+69632311 None:intergenic
CGGAGAGAGTTGTAGGAATT+AGG 0.303233 7:+69632480 None:intergenic
AGAGGCGGACGTGATGATTT+AGG 0.305522 7:+69630756 None:intergenic
AGCTCTATTCAATCACAAAT+AGG 0.312254 7:+69627173 None:intergenic
TTCAACAAGGTTGCCCTTGA+TGG 0.321266 7:-69631629 MsG0780039842.01.T01:intron
GCAGGTTGAGGAGCATATTC+TGG 0.327362 7:+69630885 None:intergenic
ATGAGAAAAGCGTGCAGATT+TGG 0.332822 7:+69632530 None:intergenic
TCAGTTGAACCATCTTCTTC+AGG 0.335118 7:-69631548 MsG0780039842.01.T01:CDS
GCTCTATTCAATCACAAATA+GGG 0.359304 7:+69627174 None:intergenic
TTGAGTAGTGTGAGGCGTAT+AGG 0.368588 7:-69627103 MsG0780039842.01.T01:three_prime_UTR
ATTTAACTGGGCCTTAACCC+TGG 0.377458 7:+69632324 None:intergenic
GCTATTATGCCCCAGGGTTA+AGG 0.391263 7:-69632335 MsG0780039842.01.T01:CDS
TAAACTGTGAAGTACTAATC+AGG 0.422789 7:-69630929 MsG0780039842.01.T01:CDS
AGAGTATGTGATGGCGCAAC+AGG 0.424416 7:+69630828 None:intergenic
TACATGATTAGACTATGTTT+CGG 0.433652 7:-69626988 MsG0780039842.01.T01:three_prime_UTR
CGGTAGAATGTCCCTGCCAT+GGG 0.434814 7:+69630726 None:intergenic
GGGCATAATAGCATATGATT+AGG 0.451440 7:+69632346 None:intergenic
TTTAACTGGGCCTTAACCCT+GGG 0.451990 7:+69632325 None:intergenic
TGTCGGATCGATGAAATCTA+AGG 0.457102 7:+69632661 None:intergenic
AGGAATTAGGAGAGAGACGA+GGG 0.461402 7:+69632493 None:intergenic
GGCTTTAGGAGGCACATCAT+TGG 0.466527 7:+69631601 None:intergenic
GTATTCACAACCTTCGCAAA+CGG 0.468806 7:-69630856 MsG0780039842.01.T01:CDS
GAAGTTGGCGTTGAAGGAGC+AGG 0.470077 7:+69630798 None:intergenic
TGAACCATCTTCTTCAGGCT+TGG 0.483109 7:-69631543 MsG0780039842.01.T01:CDS
ATCATATGCTATTATGCCCC+AGG 0.484549 7:-69632342 MsG0780039842.01.T01:CDS
ACTATGCAGGCTGATAAGTC+AGG 0.498671 7:-69627341 MsG0780039842.01.T01:intron
CCTCTTAAAAGCCCCATGGC+AGG 0.499067 7:-69630738 MsG0780039842.01.T01:CDS
AACGGAGGTTCACCCGGTGC+AGG 0.503250 7:+69630699 None:intergenic
TCGGTAGAATGTCCCTGCCA+TGG 0.503817 7:+69630725 None:intergenic
GATGATTTAGGTAGCTTGAC+AGG 0.515867 7:+69630768 None:intergenic
CATAATAGCATATGATTAGG+TGG 0.518130 7:+69632349 None:intergenic
GACGGAGTATTCAAGTAGAC+TGG 0.518813 7:-69627150 MsG0780039842.01.T01:three_prime_UTR
AGAGAGACGAGGGAAAGTGA+TGG 0.519967 7:+69632503 None:intergenic
GAGACGAGGGAAAGTGATGG+AGG 0.521390 7:+69632506 None:intergenic
GTTCACCCGGTGCAGGACTT+CGG 0.523121 7:+69630706 None:intergenic
GGTGGGAGACGAAGTAAAGA+AGG 0.523639 7:-69630593 MsG0780039842.01.T01:CDS
TGAGGAGCATATTCTGGTTG+AGG 0.524502 7:+69630891 None:intergenic
ACATCTGATTTGGCTTTAGG+AGG 0.528612 7:+69631590 None:intergenic
AGGAGCAGCAGAAGGTGAAG+TGG 0.529974 7:+69632581 None:intergenic
ACAGGTGGCGCCGTTTGCGA+AGG 0.536548 7:+69630846 None:intergenic
AGAAAAGCGTGCAGATTTGG+TGG 0.540319 7:+69632533 None:intergenic
CTCTTAAAAGCCCCATGGCA+GGG 0.542024 7:-69630737 MsG0780039842.01.T01:CDS
GAATACAACAATGCAGGTTG+AGG 0.544649 7:+69630873 None:intergenic
GAAGAAGATGGTTCAACTGA+AGG 0.548422 7:+69631551 None:intergenic
TTAGGTAGCTTGACAGGAGG+GGG 0.550253 7:+69630774 None:intergenic
AGAAGGTGAAGTGGAGGACA+AGG 0.552162 7:+69632590 None:intergenic
GGAAGATCTACCTTCACAAA+CGG 0.553357 7:+69630681 None:intergenic
GGATGATAATCTGCAGGTCG+TGG 0.562572 7:-69627129 MsG0780039842.01.T01:three_prime_UTR
AGCAGCAGAAGGTGAAGTGG+AGG 0.563171 7:+69632584 None:intergenic
ATTTAGGTAGCTTGACAGGA+GGG 0.566371 7:+69630772 None:intergenic
TAGACTGGATGATAATCTGC+AGG 0.567583 7:-69627135 MsG0780039842.01.T01:three_prime_UTR
TTCACAAACGGAGGTTCACC+CGG 0.577004 7:+69630693 None:intergenic
CTCTATTCAATCACAAATAG+GGG 0.577093 7:+69627175 None:intergenic
CATCATTGGAAGAACCATCA+AGG 0.577639 7:+69631615 None:intergenic
TGTTGCGCCATCACATACTC+TGG 0.579696 7:-69630826 MsG0780039842.01.T01:CDS
TCTGCCAAGCCTGAAGAAGA+TGG 0.583819 7:+69631539 None:intergenic
ATTCTACCGAAGTCCTGCAC+CGG 0.585909 7:-69630712 MsG0780039842.01.T01:CDS
AGTACTAATCAGGAAGAAAG+AGG 0.587578 7:-69630919 MsG0780039842.01.T01:CDS
TCAACTGAAGGTGCGGTCGG+TGG 0.589627 7:+69631563 None:intergenic
ATAATAGCATATGATTAGGT+GGG 0.590780 7:+69632350 None:intergenic
GGTTGTGAATACAACAATGC+AGG 0.591023 7:+69630867 None:intergenic
GTGGGAGACGAAGTAAAGAA+GGG 0.592291 7:-69630592 MsG0780039842.01.T01:CDS
TTTAGGTAGCTTGACAGGAG+GGG 0.592826 7:+69630773 None:intergenic
GAAGCTGCAACAGTAACAGT+AGG 0.602939 7:+69632561 None:intergenic
GGTTCAACTGAAGGTGCGGT+CGG 0.607776 7:+69631560 None:intergenic
TAGGAATTAGGAGAGAGACG+AGG 0.609357 7:+69632492 None:intergenic
TTGTGATTGAATAGAGCTGA+CGG 0.609537 7:-69627168 MsG0780039842.01.T01:exon
GTATGTGATGGCGCAACAGG+TGG 0.609933 7:+69630831 None:intergenic
TTCTACCGAAGTCCTGCACC+GGG 0.615606 7:-69630711 MsG0780039842.01.T01:CDS
ATCATTGGAAGAACCATCAA+GGG 0.616659 7:+69631616 None:intergenic
AATGTTTACCTCATTTAACT+GGG 0.618081 7:+69632312 None:intergenic
AGGTGAAGTGGAGGACAAGG+AGG 0.619998 7:+69632593 None:intergenic
GGAAGAGCCAGAGTATGTGA+TGG 0.623698 7:+69630819 None:intergenic
CTATGCAGGCTGATAAGTCA+GGG 0.634299 7:-69627340 MsG0780039842.01.T01:intron
GGTTAAGGCCCAGTTAAATG+AGG 0.635624 7:-69632320 MsG0780039842.01.T01:intron
GGGTGAACCTCCGTTTGTGA+AGG 0.635773 7:-69630691 MsG0780039842.01.T01:intron
TCATATGCTATTATGCCCCA+GGG 0.636266 7:-69632341 MsG0780039842.01.T01:CDS
GACTATAGTTGAAATAATCG+CGG 0.639005 7:-69627318 MsG0780039842.01.T01:CDS
GATTTAGGTAGCTTGACAGG+AGG 0.644259 7:+69630771 None:intergenic
CGTGGTAGTTGAGTAGTGTG+AGG 0.652911 7:-69627111 MsG0780039842.01.T01:three_prime_UTR
TCCGCCTCTTAAAAGCCCCA+TGG 0.655613 7:-69630742 MsG0780039842.01.T01:CDS
AGATGGTTCAACTGAAGGTG+CGG 0.664821 7:+69631556 None:intergenic
TTAACTGGGCCTTAACCCTG+GGG 0.667597 7:+69632326 None:intergenic
GTAACAGTAGGAGCAGCAGA+AGG 0.674269 7:+69632573 None:intergenic
TGGGAGACGAAGTAAAGAAG+GGG 0.685600 7:-69630591 MsG0780039842.01.T01:CDS
GGTAGAATGTCCCTGCCATG+GGG 0.689727 7:+69630727 None:intergenic
AGATCTACCTTCACAAACGG+AGG 0.698623 7:+69630684 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTTTATGTTATTTTTA+TGG - Chr7:69629011-69629030 MsG0780039842.01.T01:intron 10.0%
!! AAGAAAAATAGTAGTAAATA+GGG - Chr7:69628339-69628358 MsG0780039842.01.T01:intron 15.0%
!! ATATTTCATAATATTTGAAC+AGG - Chr7:69631639-69631658 MsG0780039842.01.T01:intron 15.0%
!! TAAGAAAAATAGTAGTAAAT+AGG - Chr7:69628338-69628357 MsG0780039842.01.T01:intron 15.0%
!! TGTTCAAATATTATGAAATA+TGG + Chr7:69631640-69631659 None:intergenic 15.0%
!! TTAAAAAGAAACTAGAAAAA+TGG + Chr7:69632633-69632652 None:intergenic 15.0%
!!! CTTTATTTAAATGTTGAATT+TGG - Chr7:69629483-69629502 MsG0780039842.01.T01:intron 15.0%
!!! GTATATTAGGTTTTTATATT+GGG + Chr7:69631228-69631247 None:intergenic 15.0%
!!! GTTTTGTTAGTATTTAAATA+AGG - Chr7:69631661-69631680 MsG0780039842.01.T01:intron 15.0%
!!! TGTATATTAGGTTTTTATAT+TGG + Chr7:69631229-69631248 None:intergenic 15.0%
!!! TTATTATTTTAGTTCAGAAT+AGG - Chr7:69631950-69631969 MsG0780039842.01.T01:intron 15.0%
!!! TTCTTTTTGTTTTCTTTTTT+TGG - Chr7:69631569-69631588 MsG0780039842.01.T01:CDS 15.0%
!!! TTTCTGAATATTTTGTTTTT+CGG - Chr7:69630757-69630776 MsG0780039842.01.T01:CDS 15.0%
!! AAATAAAAGATGTTCAAAAG+TGG - Chr7:69629856-69629875 MsG0780039842.01.T01:intron 20.0%
!! AACATTTAAATAAAGCAAAG+AGG + Chr7:69629478-69629497 None:intergenic 20.0%
!! AACTTTCAAAACAAGAAAAT+TGG - Chr7:69628303-69628322 MsG0780039842.01.T01:intron 20.0%
!! ATAAGAATACAACTATTAGA+AGG + Chr7:69631829-69631848 None:intergenic 20.0%
!! ATCTTAAAGAACTGTTAATT+TGG - Chr7:69628426-69628445 MsG0780039842.01.T01:intron 20.0%
!! CGAAGTATAGATATTAATTT+AGG + Chr7:69627098-69627117 None:intergenic 20.0%
!! GTCTGATATATAATTAATGA+GGG + Chr7:69628210-69628229 None:intergenic 20.0%
!! TAAGACCTTATCTTTAATAT+AGG + Chr7:69630940-69630959 None:intergenic 20.0%
!! TATTAAGAAATGCGATAAAT+TGG + Chr7:69628395-69628414 None:intergenic 20.0%
!! TCTGATATATAATTAATGAG+GGG + Chr7:69628209-69628228 None:intergenic 20.0%
!! TGTCTGATATATAATTAATG+AGG + Chr7:69628211-69628230 None:intergenic 20.0%
!! TTAATGATGATTCGATATAT+TGG - Chr7:69630899-69630918 MsG0780039842.01.T01:CDS 20.0%
!! TTGATACTGTAAGTATATTT+CGG - Chr7:69632248-69632267 MsG0780039842.01.T01:intron 20.0%
!!! AAATCTTGTGTTAGTTTATT+AGG - Chr7:69629946-69629965 MsG0780039842.01.T01:intron 20.0%
!!! ATTCTTTGTATAATGCTTTT+TGG - Chr7:69628879-69628898 MsG0780039842.01.T01:intron 20.0%
!!! ATTTCCATTTTGTCAAATTT+CGG + Chr7:69629833-69629852 None:intergenic 20.0%
!!! CAGTTTTATCAATATAAACA+TGG - Chr7:69629717-69629736 MsG0780039842.01.T01:intron 20.0%
!!! CTTAAATTTGATTTCTAACT+TGG - Chr7:69632056-69632075 MsG0780039842.01.T01:intron 20.0%
!!! TAAAACATTTTTGTGTTATG+AGG + Chr7:69630271-69630290 None:intergenic 20.0%
!!! TCTTAATTTCTTTTGAGAAA+TGG - Chr7:69629224-69629243 MsG0780039842.01.T01:intron 20.0%
!!! TGACTTTTTTATTTGCATTT+TGG + Chr7:69632091-69632110 None:intergenic 20.0%
!!! TTTCTCAATTTTTGATTACT+TGG + Chr7:69631482-69631501 None:intergenic 20.0%
!!! TTTGAATTTTGTAGAATTGT+TGG + Chr7:69630543-69630562 None:intergenic 20.0%
!!! TTTTGTTTTCTTTTTTTGGT+AGG - Chr7:69631573-69631592 MsG0780039842.01.T01:CDS 20.0%
! AAATCAAACCTCTAATGATA+AGG + Chr7:69632310-69632329 None:intergenic 25.0%
! AATGTTTACCTCATTTAACT+GGG + Chr7:69627213-69627232 None:intergenic 25.0%
! ACACAATTACAGTTATTGAT+TGG - Chr7:69627724-69627743 MsG0780039842.01.T01:intron 25.0%
! ACATATATTACGCATTTATG+TGG + Chr7:69629152-69629171 None:intergenic 25.0%
! ACCTTATCTTTAATATAGGT+GGG + Chr7:69630936-69630955 None:intergenic 25.0%
! ACTAATATCCTTATCATTAG+AGG - Chr7:69632299-69632318 MsG0780039842.01.T01:intron 25.0%
! AGAAGTTAAAAATATGCGTA+GGG + Chr7:69632515-69632534 None:intergenic 25.0%
! AGCACGCATTTATTAATAAT+TGG - Chr7:69628272-69628291 MsG0780039842.01.T01:intron 25.0%
! AGGTATAATTAATGATGCAT+TGG + Chr7:69628177-69628196 None:intergenic 25.0%
! AGTAATATAAATCTTTACCG+TGG + Chr7:69629598-69629617 None:intergenic 25.0%
! AGTTATTGTTTCATGGTTAA+AGG + Chr7:69631440-69631459 None:intergenic 25.0%
! ATAATAGCATATGATTAGGT+GGG + Chr7:69627175-69627194 None:intergenic 25.0%
! ATTCACACAAAACTATAGAA+TGG - Chr7:69629198-69629217 MsG0780039842.01.T01:intron 25.0%
! CAAAGGAAAATCTTAATTAC+TGG - Chr7:69629687-69629706 MsG0780039842.01.T01:intron 25.0%
! CATTAAGCTAGTGATTTATT+TGG + Chr7:69630885-69630904 None:intergenic 25.0%
! CCTTGTATAAAAACCTAATA+TGG - Chr7:69631021-69631040 MsG0780039842.01.T01:intron 25.0%
! CTGACTCAAAAACATAAATT+CGG - Chr7:69630679-69630698 MsG0780039842.01.T01:intron 25.0%
! GTAATATAAATCTTTACCGT+GGG + Chr7:69629597-69629616 None:intergenic 25.0%
! GTATTCTTATGTCATTCATA+AGG - Chr7:69631839-69631858 MsG0780039842.01.T01:intron 25.0%
! GTGATATATTCTGAATATCT+TGG - Chr7:69630850-69630869 MsG0780039842.01.T01:CDS 25.0%
! TACATACTATGACTCTATAA+GGG - Chr7:69629060-69629079 MsG0780039842.01.T01:intron 25.0%
! TACATGATTAGACTATGTTT+CGG - Chr7:69632534-69632553 MsG0780039842.01.T01:CDS 25.0%
! TAGAAGTTAAAAATATGCGT+AGG + Chr7:69632516-69632535 None:intergenic 25.0%
! TATATGAAGGATTCTTTCTT+AGG - Chr7:69628908-69628927 MsG0780039842.01.T01:intron 25.0%
! TCAAATAAGACAATTCAAAC+AGG + Chr7:69627364-69627383 None:intergenic 25.0%
! TCTTCATTTCATTTGAGAAA+TGG + Chr7:69629098-69629117 None:intergenic 25.0%
! TTACTAGAGTTTATAAAGAG+TGG - Chr7:69630957-69630976 MsG0780039842.01.T01:CDS 25.0%
! TTAGGATTCTCTTCATTTAA+TGG - Chr7:69629312-69629331 MsG0780039842.01.T01:intron 25.0%
! TTGATGCAATGTTTATTGTA+TGG + Chr7:69632019-69632038 None:intergenic 25.0%
! TTTATGACACCAAAGTATAT+AGG - Chr7:69629652-69629671 MsG0780039842.01.T01:intron 25.0%
! TTTCAAAACAAGAAAATTGG+TGG - Chr7:69628306-69628325 MsG0780039842.01.T01:intron 25.0%
! TTTCCTCATTTAATCTAAGA+GGG - Chr7:69627682-69627701 MsG0780039842.01.T01:intron 25.0%
! TTTGGATTGAAGAATATCAT+TGG - Chr7:69630052-69630071 MsG0780039842.01.T01:intron 25.0%
! TTTGTTCCTATTCTCTTTAA+CGG - Chr7:69631597-69631616 MsG0780039842.01.T01:CDS 25.0%
!! AAAGAACTGTTAATTTGGAA+TGG - Chr7:69628431-69628450 MsG0780039842.01.T01:intron 25.0%
!! AGGTGGAATTTTAGATTTAT+TGG + Chr7:69630407-69630426 None:intergenic 25.0%
!! CAACTATTAATTTTGAACAG+AGG + Chr7:69628101-69628120 None:intergenic 25.0%
!! CCATATTAGGTTTTTATACA+AGG + Chr7:69631024-69631043 None:intergenic 25.0%
!! GGTGGAATTTTAGATTTATT+GGG + Chr7:69630406-69630425 None:intergenic 25.0%
!! TAGAATTGTTGGTGAAAAAA+TGG + Chr7:69630532-69630551 None:intergenic 25.0%
!! TTTATTCAAATCTGAAGTGT+CGG - Chr7:69627631-69627650 MsG0780039842.01.T01:intron 25.0%
!! TTTTCCTCATTTAATCTAAG+AGG - Chr7:69627681-69627700 MsG0780039842.01.T01:intron 25.0%
!!! AGGAAGATTTTGTTTTGAAT+TGG - Chr7:69632439-69632458 MsG0780039842.01.T01:intron 25.0%
!!! ATACATTTCTATGCTGATTT+TGG - Chr7:69627855-69627874 MsG0780039842.01.T01:intron 25.0%
!!! CTAGTTTCTTTTTAAGCTTA+GGG - Chr7:69632638-69632657 MsG0780039842.01.T01:five_prime_UTR 25.0%
!!! TAGTTTCTTTTTAAGCTTAG+GGG - Chr7:69632639-69632658 MsG0780039842.01.T01:five_prime_UTR 25.0%
!!! TCTAGTTTCTTTTTAAGCTT+AGG - Chr7:69632637-69632656 MsG0780039842.01.T01:five_prime_UTR 25.0%
AAACAAGCACCTATATACTT+TGG + Chr7:69629664-69629683 None:intergenic 30.0%
AAATAAAGCAAAGAGGAGTT+GGG + Chr7:69629471-69629490 None:intergenic 30.0%
AAATATGGACTTCTGCATAA+AGG + Chr7:69631625-69631644 None:intergenic 30.0%
AAATGGCACTTTCCATTAAA+CGG - Chr7:69629438-69629457 MsG0780039842.01.T01:intron 30.0%
AACATGTTAGGTAGACAATT+AGG - Chr7:69630006-69630025 MsG0780039842.01.T01:intron 30.0%
ACATGTTAGGTAGACAATTA+GGG - Chr7:69630007-69630026 MsG0780039842.01.T01:intron 30.0%
ACGAAACACGACAATATAAT+AGG - Chr7:69629755-69629774 MsG0780039842.01.T01:intron 30.0%
ACGACAATATAATAGGTGTT+AGG - Chr7:69629762-69629781 MsG0780039842.01.T01:intron 30.0%
ACTATATTTGTGTACTATGC+AGG - Chr7:69632168-69632187 MsG0780039842.01.T01:intron 30.0%
ACTCTTTATAAACTCTAGTC+AGG + Chr7:69631164-69631183 None:intergenic 30.0%
AGCTCTATTCAATCACAAAT+AGG + Chr7:69632352-69632371 None:intergenic 30.0%
AGTGATTTATTTGGATGTTC+AGG + Chr7:69630876-69630895 None:intergenic 30.0%
ATAAGCGCTTATCATGAATA+GGG + Chr7:69627588-69627607 None:intergenic 30.0%
ATTTGAAAACAGGCTTGAAT+TGG + Chr7:69629930-69629949 None:intergenic 30.0%
CAGAAAAACAAAATAGAGCA+AGG + Chr7:69630743-69630762 None:intergenic 30.0%
CATAATAGCATATGATTAGG+TGG + Chr7:69627176-69627195 None:intergenic 30.0%
CATAGAAATGTATGTCTATG+TGG + Chr7:69627848-69627867 None:intergenic 30.0%
CCAAGCTATGTTTGTATATT+AGG + Chr7:69631241-69631260 None:intergenic 30.0%
CCTAATATACAAACATAGCT+TGG - Chr7:69631238-69631257 MsG0780039842.01.T01:intron 30.0%
CGACAATATAATAGGTGTTA+GGG - Chr7:69629763-69629782 MsG0780039842.01.T01:intron 30.0%
CTAACACAAGATTTGAAAAC+AGG + Chr7:69629940-69629959 None:intergenic 30.0%
CTACATACTATGACTCTATA+AGG - Chr7:69629059-69629078 MsG0780039842.01.T01:intron 30.0%
CTATATAATGTACGACATGA+TGG - Chr7:69629510-69629529 MsG0780039842.01.T01:intron 30.0%
CTCAGTAAGTTATTGTTTCA+TGG + Chr7:69631447-69631466 None:intergenic 30.0%
CTCTATTCAATCACAAATAG+GGG + Chr7:69632350-69632369 None:intergenic 30.0%
GAAGATAAAATGTGATACCT+TGG + Chr7:69627076-69627095 None:intergenic 30.0%
GAATGTTTACCTCATTTAAC+TGG + Chr7:69627214-69627233 None:intergenic 30.0%
GACCTTATCTTTAATATAGG+TGG + Chr7:69630937-69630956 None:intergenic 30.0%
GACTATAGTTGAAATAATCG+CGG - Chr7:69632204-69632223 MsG0780039842.01.T01:intron 30.0%
GATAGATATGGAGTGTAAAA+GGG + Chr7:69627238-69627257 None:intergenic 30.0%
GATATTCAGAATATATCACC+AGG + Chr7:69630849-69630868 None:intergenic 30.0%
GCTAAAACTATTATGTCCAT+TGG - Chr7:69628369-69628388 MsG0780039842.01.T01:intron 30.0%
GCTCTATTCAATCACAAATA+GGG + Chr7:69632351-69632370 None:intergenic 30.0%
GGTAAGTGTATATAAACGAT+GGG + Chr7:69631072-69631091 None:intergenic 30.0%
GTCTTATCCTTAATCTATGT+GGG + Chr7:69631142-69631161 None:intergenic 30.0%
TAAATAAAGCAAAGAGGAGT+TGG + Chr7:69629472-69629491 None:intergenic 30.0%
TATCATTGGAATGAAAGAAG+AGG - Chr7:69630066-69630085 MsG0780039842.01.T01:intron 30.0%
TCAATATAAACATGGCATTG+CGG - Chr7:69629725-69629744 MsG0780039842.01.T01:intron 30.0%
TCCCACCTATATTAAAGATA+AGG - Chr7:69630932-69630951 MsG0780039842.01.T01:CDS 30.0%
TCCTTGGTTATTCAAACAAA+GGG + Chr7:69630298-69630317 None:intergenic 30.0%
TCTACAAAATTCAAACGTGA+GGG - Chr7:69630548-69630567 MsG0780039842.01.T01:CDS 30.0%
TGAGTCTATCTTACTCTAAA+TGG - Chr7:69629421-69629440 MsG0780039842.01.T01:intron 30.0%
TGATAGATATGGAGTGTAAA+AGG + Chr7:69627239-69627258 None:intergenic 30.0%
TGGTAAGTGTATATAAACGA+TGG + Chr7:69631073-69631092 None:intergenic 30.0%
TTAATGAGGGGAAAATAAGA+AGG + Chr7:69628197-69628216 None:intergenic 30.0%
TTCAGTTTCAGTTTGATTCA+TGG - Chr7:69626903-69626922 MsG0780039842.01.T01:three_prime_UTR 30.0%
TTCCTTGGTTATTCAAACAA+AGG + Chr7:69630299-69630318 None:intergenic 30.0%
TTCTACAAAATTCAAACGTG+AGG - Chr7:69630547-69630566 MsG0780039842.01.T01:CDS 30.0%
TTCTTATGTCATTCATAAGG+AGG - Chr7:69631842-69631861 MsG0780039842.01.T01:intron 30.0%
TTTGAAAACAGGCTTGAATT+GGG + Chr7:69629929-69629948 None:intergenic 30.0%
! CTTGTGTTAGTTTATTAGGA+GGG - Chr7:69629950-69629969 MsG0780039842.01.T01:intron 30.0%
! GATTTTGTGTCAGTCATTAT+TGG + Chr7:69629789-69629808 None:intergenic 30.0%
! GTTTGTATTTTTCTTTCCCA+CGG - Chr7:69629578-69629597 MsG0780039842.01.T01:intron 30.0%
! TAAACTGTGAAGTACTAATC+AGG - Chr7:69628593-69628612 MsG0780039842.01.T01:intron 30.0%
! TCTATCAAGAGAACAGATTT+TGG + Chr7:69627809-69627828 None:intergenic 30.0%
! TCTTGTGTTAGTTTATTAGG+AGG - Chr7:69629949-69629968 MsG0780039842.01.T01:intron 30.0%
! TTTCGGTGAACTTTTCTTTT+TGG - Chr7:69632551-69632570 MsG0780039842.01.T01:CDS 30.0%
!! AACACTTTGAGAGACTATTT+TGG - Chr7:69627401-69627420 MsG0780039842.01.T01:intron 30.0%
!! AAGTTTGTTAACACATGTGT+AGG - Chr7:69631718-69631737 MsG0780039842.01.T01:intron 30.0%
!! AATGCGTGCTTGATAATTTT+TGG + Chr7:69628262-69628281 None:intergenic 30.0%
!! AGTTTGTTAACACATGTGTA+GGG - Chr7:69631719-69631738 MsG0780039842.01.T01:intron 30.0%
!! ATTTAATGGAAAGTGCCATT+TGG - Chr7:69629326-69629345 MsG0780039842.01.T01:intron 30.0%
!! ATTTCTTTTGAGAAATGGAG+AGG - Chr7:69629229-69629248 MsG0780039842.01.T01:intron 30.0%
!! GAATAAAGAGAGTTCTGAAA+AGG - Chr7:69630232-69630251 MsG0780039842.01.T01:intron 30.0%
!! GTAACTGCTGTCTAAAATTT+TGG - Chr7:69629033-69629052 MsG0780039842.01.T01:intron 30.0%
!! TCTAACTCATCCTTTAAAAC+CGG + Chr7:69631001-69631020 None:intergenic 30.0%
!! TGATTTTGGTCTCTCTTTTT+TGG - Chr7:69627869-69627888 MsG0780039842.01.T01:intron 30.0%
!! TTGTTGCGAAAGTTTTGTAT+TGG - Chr7:69630203-69630222 MsG0780039842.01.T01:intron 30.0%
!! TTGTTTTGTAAGGATGAGTT+AGG - Chr7:69631202-69631221 MsG0780039842.01.T01:intron 30.0%
!! TTTTTGGCAGCTTTATATGA+AGG - Chr7:69628895-69628914 MsG0780039842.01.T01:intron 30.0%
!!! AAGCAAGTTTTGATTGATGT+CGG + Chr7:69626881-69626900 None:intergenic 30.0%
!!! ATGTGTAGGGTTTTTTGTTA+AGG - Chr7:69631732-69631751 MsG0780039842.01.T01:intron 30.0%
!!! GATTTTGTTTTGAATTGGAG+TGG - Chr7:69632444-69632463 MsG0780039842.01.T01:intron 30.0%
!!! TGGTCATTGTATTTTGATTG+TGG - Chr7:69629886-69629905 MsG0780039842.01.T01:intron 30.0%
AAACAACCGAAACTAAAGTG+AGG - Chr7:69630124-69630143 MsG0780039842.01.T01:intron 35.0%
AAACTTTCGCAACAATGAAG+AGG + Chr7:69630198-69630217 None:intergenic 35.0%
AAATGCGATAAATTGGCCAA+TGG + Chr7:69628388-69628407 None:intergenic 35.0%
AACTTTCGCAACAATGAAGA+GGG + Chr7:69630197-69630216 None:intergenic 35.0%
AAGCTGAATGAGACACATAA+AGG - Chr7:69631501-69631520 MsG0780039842.01.T01:CDS 35.0%
AAGGAACCGTTAAAGAGAAT+AGG + Chr7:69631606-69631625 None:intergenic 35.0%
AAGTGTATATAAACGATGGG+TGG + Chr7:69631069-69631088 None:intergenic 35.0%
ACTTGTGAGTACTAGTCAAT+AGG + Chr7:69632276-69632295 None:intergenic 35.0%
AGTACTAATCAGGAAGAAAG+AGG - Chr7:69628603-69628622 MsG0780039842.01.T01:intron 35.0%
AGTTAAAAATATGCGTAGGG+TGG + Chr7:69632512-69632531 None:intergenic 35.0%
ATCATTGGAAGAACCATCAA+GGG + Chr7:69627909-69627928 None:intergenic 35.0%
ATGAAGGATTCTTTCTTAGG+TGG - Chr7:69628911-69628930 MsG0780039842.01.T01:intron 35.0%
ATGACTACTAGGAACATGTT+AGG - Chr7:69629994-69630013 MsG0780039842.01.T01:intron 35.0%
ATGCCCTCTTAGATTAAATG+AGG + Chr7:69627688-69627707 None:intergenic 35.0%
CAAAAAGAACAATCATCCTG+AGG + Chr7:69631558-69631577 None:intergenic 35.0%
CAAACATAGCTTGGAAACTT+AGG - Chr7:69631247-69631266 MsG0780039842.01.T01:intron 35.0%
CATAAGCGCTTATCATGAAT+AGG + Chr7:69627589-69627608 None:intergenic 35.0%
CCTTACAAAACAAGTGTTCA+AGG + Chr7:69631195-69631214 None:intergenic 35.0%
CTACGTGTCAATATCATGTT+CGG + Chr7:69627279-69627298 None:intergenic 35.0%
CTGCAGTAGAAAAATACACA+AGG + Chr7:69628529-69628548 None:intergenic 35.0%
CTTGTGAGTACTAGTCAATA+GGG + Chr7:69632275-69632294 None:intergenic 35.0%
GGGCATAATAGCATATGATT+AGG + Chr7:69627179-69627198 None:intergenic 35.0%
GTGTTTCATATGTTGTTCTG+CGG + Chr7:69630442-69630461 None:intergenic 35.0%
GTTAAAAATATGCGTAGGGT+GGG + Chr7:69632511-69632530 None:intergenic 35.0%
TCTTTAATATAGGTGGGACT+TGG + Chr7:69630930-69630949 None:intergenic 35.0%
TGAAGGATTCTTTCTTAGGT+GGG - Chr7:69628912-69628931 MsG0780039842.01.T01:intron 35.0%
TGAGTTTATCTCTCTCCAAA+TGG + Chr7:69629344-69629363 None:intergenic 35.0%
TGTTCAAAAGTGGAGTAGAA+TGG - Chr7:69629866-69629885 MsG0780039842.01.T01:intron 35.0%
TTCAGAATATATCACCAGGT+AGG + Chr7:69630845-69630864 None:intergenic 35.0%
TTCTTGTTGAACAAGTTCCA+AGG + Chr7:69630486-69630505 None:intergenic 35.0%
TTCTTTCTCTTTGCTGAGTT+AGG - Chr7:69629294-69629313 MsG0780039842.01.T01:intron 35.0%
TTGTGATTGAATAGAGCTGA+CGG - Chr7:69632354-69632373 MsG0780039842.01.T01:CDS 35.0%
! AAACAACAGCTAAGCCTTAT+AGG + Chr7:69630813-69630832 None:intergenic 35.0%
! ACTTACTGTTTTGTGTTCAG+TGG + Chr7:69626840-69626859 None:intergenic 35.0%
! CTTACTGTTTTGTGTTCAGT+GGG + Chr7:69626839-69626858 None:intergenic 35.0%
! CTTGTGTATTTTTCTACTGC+AGG - Chr7:69628527-69628546 MsG0780039842.01.T01:intron 35.0%
! GAACTGTTAATTTGGAATGG+AGG - Chr7:69628434-69628453 MsG0780039842.01.T01:intron 35.0%
! GGTCTTATCCTTAATCTATG+TGG + Chr7:69631143-69631162 None:intergenic 35.0%
! GTAGTTGGTATAAGCCTATA+AGG - Chr7:69630796-69630815 MsG0780039842.01.T01:CDS 35.0%
! TATAGGTGGATTTATTCCTC+AGG - Chr7:69631539-69631558 MsG0780039842.01.T01:CDS 35.0%
! TCCCTTTGTTTGAATAACCA+AGG - Chr7:69630294-69630313 MsG0780039842.01.T01:intron 35.0%
! TGTCTGTGTGTTGATAGATA+TGG + Chr7:69627250-69627269 None:intergenic 35.0%
! TTACTGTTTTGTGTTCAGTG+GGG + Chr7:69626838-69626857 None:intergenic 35.0%
! TTTCAGGTCTATGAATCTGT+GGG - Chr7:69630628-69630647 MsG0780039842.01.T01:intron 35.0%
! TTTGGGAAAGGCTTGTTTAA+TGG + Chr7:69630359-69630378 None:intergenic 35.0%
!! ACCTTGAAATCCGGTTTTAA+AGG - Chr7:69630988-69631007 MsG0780039842.01.T01:intron 35.0%
!! TAAAGGCATCACTATAACTG+TGG + Chr7:69631423-69631442 None:intergenic 35.0%
!! TCAACATCTGATTTGGCTTT+AGG + Chr7:69627938-69627957 None:intergenic 35.0%
!! TCCTTTAAAACCGGATTTCA+AGG + Chr7:69630992-69631011 None:intergenic 35.0%
!!! AACTGTGGTTTTATTGTCGA+GGG + Chr7:69631408-69631427 None:intergenic 35.0%
!!! AATCTAAGAGGGCATTTTAG+AGG - Chr7:69627693-69627712 MsG0780039842.01.T01:intron 35.0%
!!! ACTTCACTTCACTGTTTTTG+TGG - Chr7:69631976-69631995 MsG0780039842.01.T01:intron 35.0%
!!! ATAGGTGCTTGTTTTTGCAA+AGG - Chr7:69629670-69629689 MsG0780039842.01.T01:intron 35.0%
!!! CCTTGAACACTTGTTTTGTA+AGG - Chr7:69631192-69631211 MsG0780039842.01.T01:intron 35.0%
!!! CTTCACTTCACTGTTTTTGT+GGG - Chr7:69631977-69631996 MsG0780039842.01.T01:intron 35.0%
!!! TAACTGTGGTTTTATTGTCG+AGG + Chr7:69631409-69631428 None:intergenic 35.0%
!!! TCTCTTTTTTGGCTTCAACA+AGG - Chr7:69627880-69627899 MsG0780039842.01.T01:intron 35.0%
!!! TGGTTCTTTCAAGTTTTCCT+TGG + Chr7:69630314-69630333 None:intergenic 35.0%
!!! TTCACTGTTTTTGTGGGTTA+TGG - Chr7:69631983-69632002 MsG0780039842.01.T01:intron 35.0%
!!! TTTTAGTTTTTACCACACCC+TGG - Chr7:69630704-69630723 MsG0780039842.01.T01:CDS 35.0%
AAAACCGGATTTCAAGGTGA+AGG + Chr7:69630986-69631005 None:intergenic 40.0%
AAAATAGAGCAAGGCATACC+AGG + Chr7:69630734-69630753 None:intergenic 40.0%
AAAATTCAAACGTGAGGGCT+AGG - Chr7:69630553-69630572 MsG0780039842.01.T01:CDS 40.0%
AAACCGGATTTCAAGGTGAA+GGG + Chr7:69630985-69631004 None:intergenic 40.0%
AACAGGCTTGAATTGGGAAA+TGG + Chr7:69629923-69629942 None:intergenic 40.0%
AACCATATGTGTTGCAGTGT+CGG - Chr7:69627303-69627322 MsG0780039842.01.T01:CDS 40.0%
AAGAATTACTGCAAGCTCTG+TGG - Chr7:69630501-69630520 MsG0780039842.01.T01:intron 40.0%
AAGTTCAAGATTGAAGCAGC+CGG + Chr7:69628065-69628084 None:intergenic 40.0%
ACGGCCGAAATTTGACAAAA+TGG - Chr7:69629826-69629845 MsG0780039842.01.T01:intron 40.0%
AGAATTACTGCAAGCTCTGT+GGG - Chr7:69630502-69630521 MsG0780039842.01.T01:intron 40.0%
ATCATATGCTATTATGCCCC+AGG - Chr7:69627180-69627199 MsG0780039842.01.T01:intron 40.0%
ATTTAGGTAGCTTGACAGGA+GGG + Chr7:69628753-69628772 None:intergenic 40.0%
CAGCAAAGAGAAAGAAAGAG+AGG + Chr7:69629290-69629309 None:intergenic 40.0%
CATCATTGGAAGAACCATCA+AGG + Chr7:69627910-69627929 None:intergenic 40.0%
CCTTTCCCAAAACAAGTCTA+GGG - Chr7:69630368-69630387 MsG0780039842.01.T01:intron 40.0%
CTGAATGAGACACATAAAGG+AGG - Chr7:69631504-69631523 MsG0780039842.01.T01:CDS 40.0%
CTTACAGTATCAACGCTTAC+AGG + Chr7:69632241-69632260 None:intergenic 40.0%
CTTTCCCAAAACAAGTCTAG+GGG - Chr7:69630369-69630388 MsG0780039842.01.T01:intron 40.0%
GAAGAAGATGGTTCAACTGA+AGG + Chr7:69627974-69627993 None:intergenic 40.0%
GAATACAACAATGCAGGTTG+AGG + Chr7:69628652-69628671 None:intergenic 40.0%
GATGATTTAGGTAGCTTGAC+AGG + Chr7:69628757-69628776 None:intergenic 40.0%
GCACTTTCCATTAAACGGAT+AGG - Chr7:69629443-69629462 MsG0780039842.01.T01:intron 40.0%
GGAAGATCTACCTTCACAAA+CGG + Chr7:69628844-69628863 None:intergenic 40.0%
GGTTGTGAATACAACAATGC+AGG + Chr7:69628658-69628677 None:intergenic 40.0%
GTATGTCTCTTCTCTGTGTA+GGG - Chr7:69627146-69627165 MsG0780039842.01.T01:three_prime_UTR 40.0%
GTATTCACAACCTTCGCAAA+CGG - Chr7:69628666-69628685 MsG0780039842.01.T01:intron 40.0%
GTGATACCTTGGTGAAAAAG+CGG + Chr7:69627065-69627084 None:intergenic 40.0%
TAGACTGGATGATAATCTGC+AGG - Chr7:69632387-69632406 MsG0780039842.01.T01:intron 40.0%
TAGGCTTATACCAACTACTG+AGG + Chr7:69630794-69630813 None:intergenic 40.0%
TATACCAACTACTGAGGAGA+CGG + Chr7:69630788-69630807 None:intergenic 40.0%
TATTGTCGTGTTTCGTCCAT+AGG + Chr7:69629751-69629770 None:intergenic 40.0%
TCAACTCAGCAAGTGATGTT+TGG - Chr7:69630034-69630053 MsG0780039842.01.T01:intron 40.0%
TCACTCTAGTGCTCTTCAAA+TGG + Chr7:69630334-69630353 None:intergenic 40.0%
TCAGTTGAACCATCTTCTTC+AGG - Chr7:69627974-69627993 MsG0780039842.01.T01:intron 40.0%
TCATATGCTATTATGCCCCA+GGG - Chr7:69627181-69627200 MsG0780039842.01.T01:intron 40.0%
TCCTTAATCTATGTGGGACT+TGG + Chr7:69631136-69631155 None:intergenic 40.0%
TGAGCTGCATAATGACTACT+AGG - Chr7:69629983-69630002 MsG0780039842.01.T01:intron 40.0%
TGTATGTCTCTTCTCTGTGT+AGG - Chr7:69627145-69627164 MsG0780039842.01.T01:three_prime_UTR 40.0%
TGTCGGATCGATGAAATCTA+AGG + Chr7:69626864-69626883 None:intergenic 40.0%
TTACCAAGTCCAATAGTGCT+GGG - Chr7:69631087-69631106 MsG0780039842.01.T01:intron 40.0%
TTGGGATCCTATCCGTTTAA+TGG + Chr7:69629453-69629472 None:intergenic 40.0%
! AGTCTTGTCAAGTAAGTACC+CGG - Chr7:69628043-69628062 MsG0780039842.01.T01:intron 40.0%
! ATGAGAAAAGCGTGCAGATT+TGG + Chr7:69626995-69627014 None:intergenic 40.0%
! ATTTTGTCAAATTTCGGCCG+TGG + Chr7:69629827-69629846 None:intergenic 40.0%
! CTTTCAGGTCTATGAATCTG+TGG - Chr7:69630627-69630646 MsG0780039842.01.T01:intron 40.0%
! GGAAAGAGAAAGCATATAGG+TGG - Chr7:69631525-69631544 MsG0780039842.01.T01:CDS 40.0%
! GGAGGAAAGAGAAAGCATAT+AGG - Chr7:69631522-69631541 MsG0780039842.01.T01:CDS 40.0%
! TCTCTGCCTCACTTTAGTTT+CGG + Chr7:69630133-69630152 None:intergenic 40.0%
!! ACATCTGATTTGGCTTTAGG+AGG + Chr7:69627935-69627954 None:intergenic 40.0%
!! CATGTTCGTAAGCTGTTTTC+AGG - Chr7:69627454-69627473 MsG0780039842.01.T01:intron 40.0%
!! GAATGAAAGAAGAGGCATCA+AGG - Chr7:69630074-69630093 MsG0780039842.01.T01:intron 40.0%
!! TTCACCCCTAGACTTGTTTT+GGG + Chr7:69630376-69630395 None:intergenic 40.0%
!! TTTTAAGCTTAGGGGAGCAT+TGG - Chr7:69632647-69632666 MsG0780039842.01.T01:five_prime_UTR 40.0%
!!! ACTGTGGTTTTATTGTCGAG+GGG + Chr7:69631407-69631426 None:intergenic 40.0%
AAGGCATACCAGGAAAACCA+GGG + Chr7:69630724-69630743 None:intergenic 45.0%
AATCACAAATAGGGGCTGCA+AGG + Chr7:69632342-69632361 None:intergenic 45.0%
ACTATGCAGGCTGATAAGTC+AGG - Chr7:69632181-69632200 MsG0780039842.01.T01:intron 45.0%
AGAGAGAGAGAGAGCAATGA+TGG + Chr7:69631290-69631309 None:intergenic 45.0%
AGATCTACCTTCACAAACGG+AGG + Chr7:69628841-69628860 None:intergenic 45.0%
AGATGGTTCAACTGAAGGTG+CGG + Chr7:69627969-69627988 None:intergenic 45.0%
AGGAATTAGGAGAGAGACGA+GGG + Chr7:69627032-69627051 None:intergenic 45.0%
AGTTCAAGATTGAAGCAGCC+GGG + Chr7:69628064-69628083 None:intergenic 45.0%
ATACCAACTACTGAGGAGAC+GGG + Chr7:69630787-69630806 None:intergenic 45.0%
ATCACAAATAGGGGCTGCAA+GGG + Chr7:69632341-69632360 None:intergenic 45.0%
ATGTTGTTCTGCGGCATCTT+CGG + Chr7:69630433-69630452 None:intergenic 45.0%
ATTTAACTGGGCCTTAACCC+TGG + Chr7:69627201-69627220 None:intergenic 45.0%
CGGAGAGAGTTGTAGGAATT+AGG + Chr7:69627045-69627064 None:intergenic 45.0%
CGGTGGTTCAACATCTGATT+TGG + Chr7:69627945-69627964 None:intergenic 45.0%
CTATGCAGGCTGATAAGTCA+GGG - Chr7:69632182-69632201 MsG0780039842.01.T01:intron 45.0%
CTTACCAAGTCCAATAGTGC+TGG - Chr7:69631086-69631105 MsG0780039842.01.T01:intron 45.0%
GAAAAAGCGGAGAGAGTTGT+AGG + Chr7:69627052-69627071 None:intergenic 45.0%
GAAGCTGCAACAGTAACAGT+AGG + Chr7:69626964-69626983 None:intergenic 45.0%
GATTTAGGTAGCTTGACAGG+AGG + Chr7:69628754-69628773 None:intergenic 45.0%
GCACACATCACATGACTTTC+AGG - Chr7:69630612-69630631 MsG0780039842.01.T01:intron 45.0%
GCCAAGTCCCACATAGATTA+AGG - Chr7:69631132-69631151 MsG0780039842.01.T01:intron 45.0%
GCCTTTCCCAAAACAAGTCT+AGG - Chr7:69630367-69630386 MsG0780039842.01.T01:intron 45.0%
GGTTAAGGCCCAGTTAAATG+AGG - Chr7:69627202-69627221 MsG0780039842.01.T01:intron 45.0%
GTGGGAGACGAAGTAAAGAA+GGG - Chr7:69628930-69628949 MsG0780039842.01.T01:intron 45.0%
TACCGACACTGCAACACATA+TGG + Chr7:69627308-69627327 None:intergenic 45.0%
TAGGAATTAGGAGAGAGACG+AGG + Chr7:69627033-69627052 None:intergenic 45.0%
TCCACCATGCTAAAATGCCA+CGG - Chr7:69629807-69629826 MsG0780039842.01.T01:intron 45.0%
TGAACAAGTGCATCCTACAG+AGG + Chr7:69629264-69629283 None:intergenic 45.0%
TGAACCATCTTCTTCAGGCT+TGG - Chr7:69627979-69627998 MsG0780039842.01.T01:intron 45.0%
TGGGAGACGAAGTAAAGAAG+GGG - Chr7:69628931-69628950 MsG0780039842.01.T01:intron 45.0%
TTCAACAAGGTTGCCCTTGA+TGG - Chr7:69627893-69627912 MsG0780039842.01.T01:intron 45.0%
TTGAGTAGTGTGAGGCGTAT+AGG - Chr7:69632419-69632438 MsG0780039842.01.T01:intron 45.0%
TTTAACTGGGCCTTAACCCT+GGG + Chr7:69627200-69627219 None:intergenic 45.0%
TTTAGGTAGCTTGACAGGAG+GGG + Chr7:69628752-69628771 None:intergenic 45.0%
! AGAAAAGCGTGCAGATTTGG+TGG + Chr7:69626992-69627011 None:intergenic 45.0%
! GACGGAGTATTCAAGTAGAC+TGG - Chr7:69632372-69632391 MsG0780039842.01.T01:intron 45.0%
! GATGTGTGCTGCTCTAGTTA+AGG + Chr7:69630601-69630620 None:intergenic 45.0%
! GTAGGCTCTGATGCCATATT+AGG + Chr7:69631037-69631056 None:intergenic 45.0%
! TGAGGAGCATATTCTGGTTG+AGG + Chr7:69628634-69628653 None:intergenic 45.0%
!! CTTCACCCCTAGACTTGTTT+TGG + Chr7:69630377-69630396 None:intergenic 45.0%
!! TGAAAGAAGAGGCATCAAGG+AGG - Chr7:69630077-69630096 MsG0780039842.01.T01:intron 45.0%
!!! CCCTAGACTTGTTTTGGGAA+AGG + Chr7:69630371-69630390 None:intergenic 45.0%
!! AAGAATAATATATAATTAAA+CGG + Chr7:69628865-69628884 None:intergenic 5.0%
!!! AGTATAATAATTATTTTATT+TGG - Chr7:69629367-69629386 MsG0780039842.01.T01:intron 5.0%
!!! TTTTTATTTTTTTTTACTTT+TGG + Chr7:69628129-69628148 None:intergenic 5.0%
AAACATGGCATTGCGGCCTA+TGG - Chr7:69629732-69629751 MsG0780039842.01.T01:intron 50.0%
AGAAGGTGAAGTGGAGGACA+AGG + Chr7:69626935-69626954 None:intergenic 50.0%
AGAGAGACGAGGGAAAGTGA+TGG + Chr7:69627022-69627041 None:intergenic 50.0%
AGAGGCGGACGTGATGATTT+AGG + Chr7:69628769-69628788 None:intergenic 50.0%
AGTGCATCCTACAGAGGAGT+AGG + Chr7:69629258-69629277 None:intergenic 50.0%
ATACCAGGAAAACCAGGGTG+TGG + Chr7:69630719-69630738 None:intergenic 50.0%
ATGCCCAGCACTATTGGACT+TGG + Chr7:69631093-69631112 None:intergenic 50.0%
ATTCAAACAGGACGCCTCTC+AGG + Chr7:69627352-69627371 None:intergenic 50.0%
ATTCTACCGAAGTCCTGCAC+CGG - Chr7:69628810-69628829 MsG0780039842.01.T01:intron 50.0%
CAAGGCATACCAGGAAAACC+AGG + Chr7:69630725-69630744 None:intergenic 50.0%
CCAAGGAGAGCAAGATGTTC+TGG + Chr7:69630469-69630488 None:intergenic 50.0%
CCAGAACATCTTGCTCTCCT+TGG - Chr7:69630466-69630485 MsG0780039842.01.T01:intron 50.0%
CGCAACAATGAAGAGGGTCA+AGG + Chr7:69630191-69630210 None:intergenic 50.0%
CGTGGTAGTTGAGTAGTGTG+AGG - Chr7:69632411-69632430 MsG0780039842.01.T01:intron 50.0%
CTCTTAAAAGCCCCATGGCA+GGG - Chr7:69628785-69628804 MsG0780039842.01.T01:intron 50.0%
GAGGATTCCTACTCCTCTGT+AGG - Chr7:69629248-69629267 MsG0780039842.01.T01:intron 50.0%
GCACCCTTCACCTTGAAATC+CGG - Chr7:69630979-69630998 MsG0780039842.01.T01:intron 50.0%
GCTATTATGCCCCAGGGTTA+AGG - Chr7:69627187-69627206 MsG0780039842.01.T01:intron 50.0%
GGAAGAGCCAGAGTATGTGA+TGG + Chr7:69628706-69628725 None:intergenic 50.0%
GGATGATAATCTGCAGGTCG+TGG - Chr7:69632393-69632412 MsG0780039842.01.T01:intron 50.0%
GGTGGGAGACGAAGTAAAGA+AGG - Chr7:69628929-69628948 MsG0780039842.01.T01:intron 50.0%
GTAACAGTAGGAGCAGCAGA+AGG + Chr7:69626952-69626971 None:intergenic 50.0%
TACCAACTACTGAGGAGACG+GGG + Chr7:69630786-69630805 None:intergenic 50.0%
TCTGCCAAGCCTGAAGAAGA+TGG + Chr7:69627986-69628005 None:intergenic 50.0%
TGTGTCAGACATCACCTGAG+AGG - Chr7:69627335-69627354 MsG0780039842.01.T01:CDS 50.0%
TGTTGCGCCATCACATACTC+TGG - Chr7:69628696-69628715 MsG0780039842.01.T01:intron 50.0%
TTAACTGGGCCTTAACCCTG+GGG + Chr7:69627199-69627218 None:intergenic 50.0%
TTAGGTAGCTTGACAGGAGG+GGG + Chr7:69628751-69628770 None:intergenic 50.0%
TTCACAAACGGAGGTTCACC+CGG + Chr7:69628832-69628851 None:intergenic 50.0%
! AGAGTATGTGATGGCGCAAC+AGG + Chr7:69628697-69628716 None:intergenic 50.0%
! CAATAGTGCTGGGCATGAGA+GGG - Chr7:69631097-69631116 MsG0780039842.01.T01:intron 50.0%
! GCAGGTTGAGGAGCATATTC+TGG + Chr7:69628640-69628659 None:intergenic 50.0%
!! GGCTTTAGGAGGCACATCAT+TGG + Chr7:69627924-69627943 None:intergenic 50.0%
!! TTACCACACCCTGGTTTTCC+TGG - Chr7:69630713-69630732 MsG0780039842.01.T01:CDS 50.0%
!!! CTCTCTCCGCTTTTTCACCA+AGG - Chr7:69627056-69627075 MsG0780039842.01.T01:three_prime_UTR 50.0%
AAACGATGGGTGGCCCGAAT+CGG + Chr7:69631059-69631078 None:intergenic 55.0%
AGCAGCAGAAGGTGAAGTGG+AGG + Chr7:69626941-69626960 None:intergenic 55.0%
AGGAGCAGCAGAAGGTGAAG+TGG + Chr7:69626944-69626963 None:intergenic 55.0%
AGGTGAAGTGGAGGACAAGG+AGG + Chr7:69626932-69626951 None:intergenic 55.0%
CCTCTCATGCCCAGCACTAT+TGG + Chr7:69631099-69631118 None:intergenic 55.0%
CCTCTTAAAAGCCCCATGGC+AGG - Chr7:69628784-69628803 MsG0780039842.01.T01:intron 55.0%
CGGTAGAATGTCCCTGCCAT+GGG + Chr7:69628799-69628818 None:intergenic 55.0%
GAGACGAGGGAAAGTGATGG+AGG + Chr7:69627019-69627038 None:intergenic 55.0%
GGGTGAACCTCCGTTTGTGA+AGG - Chr7:69628831-69628850 MsG0780039842.01.T01:intron 55.0%
GGTAGAATGTCCCTGCCATG+GGG + Chr7:69628798-69628817 None:intergenic 55.0%
TCCGCCTCTTAAAAGCCCCA+TGG - Chr7:69628780-69628799 MsG0780039842.01.T01:intron 55.0%
TCGGTAGAATGTCCCTGCCA+TGG + Chr7:69628800-69628819 None:intergenic 55.0%
TTCTACCGAAGTCCTGCACC+GGG - Chr7:69628811-69628830 MsG0780039842.01.T01:intron 55.0%
TTCTGCGGCATCTTCGGTTG+AGG + Chr7:69630427-69630446 None:intergenic 55.0%
TTGACAGGAGGGGGAGAAGT+TGG + Chr7:69628742-69628761 None:intergenic 55.0%
! CCAATAGTGCTGGGCATGAG+AGG - Chr7:69631096-69631115 MsG0780039842.01.T01:intron 55.0%
! CCTGCCATGGGGCTTTTAAG+AGG + Chr7:69628787-69628806 None:intergenic 55.0%
! CTGGGCATGAGAGGGTGTAT+TGG - Chr7:69631105-69631124 MsG0780039842.01.T01:intron 55.0%
! GAAGTTGGCGTTGAAGGAGC+AGG + Chr7:69628727-69628746 None:intergenic 55.0%
! GGCATCAGAGCCTACCGATT+CGG - Chr7:69631042-69631061 MsG0780039842.01.T01:intron 55.0%
! GGTTCAACTGAAGGTGCGGT+CGG + Chr7:69627965-69627984 None:intergenic 55.0%
! GTATGTGATGGCGCAACAGG+TGG + Chr7:69628694-69628713 None:intergenic 55.0%
!! GCATCAGAGCCTACCGATTC+GGG - Chr7:69631043-69631062 MsG0780039842.01.T01:intron 55.0%
!! GCCATGGGGCTTTTAAGAGG+CGG + Chr7:69628784-69628803 None:intergenic 55.0%
!! GCCGTGGCATTTTAGCATGG+TGG + Chr7:69629811-69629830 None:intergenic 55.0%
!! TCGGCCGTGGCATTTTAGCA+TGG + Chr7:69629814-69629833 None:intergenic 55.0%
GACCCCGTCTCCTCAGTAGT+TGG - Chr7:69630781-69630800 MsG0780039842.01.T01:CDS 60.0%
GTTCACCCGGTGCAGGACTT+CGG + Chr7:69628819-69628838 None:intergenic 60.0%
TGCGGCATCTTCGGTTGAGG+TGG + Chr7:69630424-69630443 None:intergenic 60.0%
! GGGGGAGAAGTTGGCGTTGA+AGG + Chr7:69628733-69628752 None:intergenic 60.0%
! TCAACTGAAGGTGCGGTCGG+TGG + Chr7:69627962-69627981 None:intergenic 60.0%
AACGGAGGTTCACCCGGTGC+AGG + Chr7:69628826-69628845 None:intergenic 65.0%
ACAGGTGGCGCCGTTTGCGA+AGG + Chr7:69628679-69628698 None:intergenic 65.0%
GATGGGTGGCCCGAATCGGT+AGG + Chr7:69631055-69631074 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 69626834 69632710 69626834 ID=MsG0780039842.01;Name=MsG0780039842.01
Chr7 mRNA 69626834 69632710 69626834 ID=MsG0780039842.01.T01;Parent=MsG0780039842.01;Name=MsG0780039842.01.T01;_AED=0.49;_eAED=0.49;_QI=88|1|1|1|1|1|7|343|275
Chr7 exon 69626834 69627197 69626834 ID=MsG0780039842.01.T01:exon:12648;Parent=MsG0780039842.01.T01
Chr7 exon 69627289 69627354 69627289 ID=MsG0780039842.01.T01:exon:12647;Parent=MsG0780039842.01.T01
Chr7 exon 69630543 69630614 69630543 ID=MsG0780039842.01.T01:exon:12646;Parent=MsG0780039842.01.T01
Chr7 exon 69630692 69630995 69630692 ID=MsG0780039842.01.T01:exon:12645;Parent=MsG0780039842.01.T01
Chr7 exon 69631491 69631642 69631491 ID=MsG0780039842.01.T01:exon:12644;Parent=MsG0780039842.01.T01
Chr7 exon 69632321 69632377 69632321 ID=MsG0780039842.01.T01:exon:12643;Parent=MsG0780039842.01.T01
Chr7 exon 69632467 69632710 69632467 ID=MsG0780039842.01.T01:exon:12642;Parent=MsG0780039842.01.T01
Chr7 five_prime_UTR 69632623 69632710 69632623 ID=MsG0780039842.01.T01:five_prime_utr;Parent=MsG0780039842.01.T01
Chr7 CDS 69632467 69632622 69632467 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 CDS 69632321 69632377 69632321 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 CDS 69631491 69631642 69631491 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 CDS 69630692 69630995 69630692 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 CDS 69630543 69630614 69630543 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 CDS 69627289 69627354 69627289 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 CDS 69627177 69627197 69627177 ID=MsG0780039842.01.T01:cds;Parent=MsG0780039842.01.T01
Chr7 three_prime_UTR 69626834 69627176 69626834 ID=MsG0780039842.01.T01:three_prime_utr;Parent=MsG0780039842.01.T01
Gene Sequence

>MsG0780039842.01.T01

ATGGCTTCCTCCTTGTCCTCCACTTCACCTTCTGCTGCTCCTACTGTTACTGTTGCAGCTTCAGCTTCCACCAAATCTGCACGCTTTTCTCATTCCTCCATCACTTTCCCTCGTCTCTCTCCTAATTCCTACAACTCTCTCCGCTTTTTCACCAAGGGATGCCCACCTAATCATATGCTATTATGCCCCAGGGTTAAGGCCCAGTTAAATGAGGTTGCCCTTGATGGTTCTTCCAATGATGTGCCTCCTAAAGCCAAATCAGATGTTGAACCACCGACCGCACCTTCAGTTGAACCATCTTCTTCAGGCTTGGCAGATCAAGAATCAATCTCTGAACTTTTTGATCAAATTGCAAGTCTTGTCAAGCTTGTTGATTCTAGAGACATTGTAGAATTGAAGCTGAAGCAGCTAAACTGTGAAGTACTAATCAGGAAGAAAGAGGCTATGCCTCAACCAGAATATGCTCCTCAACCTGCATTGTTGTATTCACAACCTTCGCAAACGGCGCCACCTGTTGCGCCATCACATACTCTGGCTCTTCCTGCTCCTTCAACGCCAACTTCTCCCCCTCCTGTCAAGCTACCTAAATCATCACGTCCGCCTCTTAAAAGCCCCATGGCAGGGACATTCTACCGAAGTCCTGCACCGGGTGAACCTCCGTTTGTGAAGGTGGGAGACGAAGTAAAGAAGGGGCAAGTCGTGTGCATCATTGAAGCAATGAAATTGATGAATGAGATTGAAGCTGATAAGTCAGGGACTATAGTTGAAATAATCGCGGAAGATGCTAAGCCTGTAAGCGTTGATACTCCCCTATTTGTGATTGAATAG
Protein sequence

>MsG0780039842.01.T01

MASSLSSTSPSAAPTVTVAASASTKSARFSHSSITFPRLSPNSYNSLRFFTKGCPPNHMLLCPRVKAQLNEVALDGSSNDVPPKAKSDVEPPTAPSVEPSSSGLADQESISELFDQIASLVKLVDSRDIVELKLKQLNCEVLIRKKEAMPQPEYAPQPALLYSQPSQTAPPVAPSHTLALPAPSTPTSPPPVKLPKSSRPPLKSPMAGTFYRSPAPGEPPFVKVGDEVKKGQVVCIIEAMKLMNEIEADKSGTIVEIIAEDAKPVSVDTPLFVIE*