AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040474.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040474.01.T01 MTR_7g089080 51.648 91 12 1 20 78 281 371 5.27e-22 88.2
MsG0780040474.01.T01 MTR_5g044040 73.810 42 11 0 21 62 37 78 3.45e-17 70.5
MsG0780040474.01.T01 MTR_5g088980 43.023 86 22 1 20 78 247 332 1.83e-15 69.3
MsG0780040474.01.T02 MTR_7g089080 98.305 59 1 0 7 65 352 410 2.91e-36 128
MsG0780040474.01.T02 MTR_5g088980 67.797 59 18 1 8 65 314 372 1.05e-21 86.3
MsG0780040474.01.T02 MTR_5g023790 45.614 57 31 0 9 65 322 378 1.09e-11 58.2
MsG0780040474.01.T02 MTR_8g074000 44.828 58 32 0 9 66 326 383 1.72e-11 57.8
MsG0780040474.01.T02 MTR_6g045270 50.847 59 26 2 10 65 189 247 1.99e-11 57.4
MsG0780040474.01.T02 MTR_5g023790 44.828 58 32 0 9 66 322 379 3.10e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040474.01.T01 AT5G06150 40.000 85 25 1 20 78 264 348 6.70e-13 62.4
MsG0780040474.01.T01 AT4G37490 43.590 78 18 2 27 78 254 331 4.18e-12 60.1
MsG0780040474.01.T01 AT2G26760 41.558 77 18 2 27 76 219 295 4.62e-12 59.7
MsG0780040474.01.T02 AT5G06150 66.667 57 19 0 8 64 330 386 6.21e-23 89.7
MsG0780040474.01.T02 AT3G11520 48.889 90 20 1 1 64 274 363 3.08e-22 87.4
MsG0780040474.01.T02 AT3G11520 66.071 56 19 0 9 64 308 363 6.36e-22 87.0
MsG0780040474.01.T02 AT4G37490 62.500 56 20 1 10 64 315 370 1.02e-18 78.2
MsG0780040474.01.T02 AT2G26760 58.333 60 24 1 7 65 278 337 2.14e-16 71.6
MsG0780040474.01.T02 AT1G76310 44.828 58 32 0 9 66 328 385 1.23e-12 60.8
MsG0780040474.01.T02 AT1G76310 44.828 58 32 0 9 66 328 385 1.66e-12 60.5
MsG0780040474.01.T02 AT1G76310 44.828 58 32 0 9 66 356 413 1.67e-12 60.5
MsG0780040474.01.T02 AT1G16330 49.091 55 28 0 9 63 545 599 1.20e-11 58.2
MsG0780040474.01.T02 AT1G20590 45.614 57 31 0 9 65 155 211 1.41e-11 57.8
MsG0780040474.01.T02 AT4G35620 46.429 56 30 0 9 64 322 377 1.89e-11 57.4
MsG0780040474.01.T02 AT2G17620 46.429 56 30 0 10 65 322 377 2.01e-11 57.4
MsG0780040474.01.T02 AT4G35620 46.429 56 30 0 9 64 322 377 3.21e-11 57.0

Find 30 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATTCATTGAAGAAATC+TGG 0.261838 7:+78131519 MsG0780040474.01.T01:CDS
TGATGCATTATGCTACATTA+AGG 0.329648 7:+78126197 MsG0780040474.01.T01:intron
TTTCTTCAATGAATGAAATT+CGG 0.358851 7:-78131514 None:intergenic
CACAATCCATCAACTTTCTT+CGG 0.388345 7:-78126323 None:intergenic
GCTGAGGCAGCAAGCATTGA+TGG 0.393892 7:-78126226 None:intergenic
CCATCCTAGGAAAGCTTGAA+TGG 0.408581 7:+78126053 MsG0780040474.01.T01:CDS
TCAACTTTCTTCGGAGTAAC+CGG 0.411212 7:-78126314 None:intergenic
AAAGTCCATTCAAACTTCCT+AGG 0.420228 7:-78131622 None:intergenic
GTTACTCCGAAGAAAGTTGA+TGG 0.449762 7:+78126317 MsG0780040474.01.T01:intron
CCATTCAAGCTTTCCTAGGA+TGG 0.453248 7:-78126053 None:intergenic
CATTGAGCAAGACTCCTGTT+TGG 0.470579 7:+78126269 MsG0780040474.01.T01:intron
AAGTCCATTCAAGCTTTCCT+AGG 0.481341 7:-78126057 None:intergenic
TTGAGTGTCTCATTCCAAAC+AGG 0.483773 7:-78126283 None:intergenic
ATCAAGGGATTTCGAGATGA+TGG 0.494191 7:+78126150 MsG0780040474.01.T01:intron
TCAAGCAGCTTTGGAAATGA+TGG 0.503420 7:+78131713 MsG0780040474.01.T01:intron
GAAACGAACAGGAACACAAA+AGG 0.540567 7:-78126094 None:intergenic
TCCATTCAAACTTCCTAGGG+TGG 0.545072 7:-78131618 None:intergenic
TCATGACCAGATACTCATCA+TGG 0.576049 7:+78131589 MsG0780040474.01.T01:CDS
CACACAAAGTCATTAACCTC+AGG 0.586086 7:-78131545 None:intergenic
AAGTCCATTCAAACTTCCTA+GGG 0.588724 7:-78131621 None:intergenic
GAGACACTCAAGATGCATAC+CGG 0.598392 7:+78126295 MsG0780040474.01.T01:intron
GTCATGGAGAAAACCATCCT+AGG 0.598998 7:+78126040 None:intergenic
AACAGGAACACAAAAGGTGT+CGG 0.610312 7:-78126088 None:intergenic
CCTTGCTGCATAAACTGCTG+AGG 0.621240 7:-78126242 None:intergenic
CCTCAGCAGTTTATGCAGCA+AGG 0.648005 7:+78126242 MsG0780040474.01.T01:intron
AATGATGCATTATGCTACGT+AGG 0.648426 7:+78131758 MsG0780040474.01.T01:CDS
GAACACAAAAGGTGTCGGCA+CGG 0.655486 7:-78126083 None:intergenic
ATCATGGAGAAAACCACCCT+AGG 0.657464 7:+78131605 MsG0780040474.01.T01:CDS
TGAAGAAATCTGGACACCTG+AGG 0.681622 7:+78131529 MsG0780040474.01.T01:CDS
GAGTGTAAGCTCTATCTGAG+AGG 0.699447 7:-78131568 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATACTAAATAATAACATC+TGG + Chr7:78128894-78128913 MsG0780040474.01.T01:intron 15.0%
!! TATACTAAATAATAACATCT+GGG + Chr7:78128895-78128914 MsG0780040474.01.T01:intron 15.0%
!!! TTTTTCAATTTTCTTTCTTT+TGG + Chr7:78126807-78126826 MsG0780040474.01.T01:intron 15.0%
!! AAGATGATTTGATCTTATTA+TGG + Chr7:78129031-78129050 MsG0780040474.01.T01:intron 20.0%
!! AATAGATAAAGTACATATTG+AGG - Chr7:78127573-78127592 None:intergenic 20.0%
!! AATATGGATATCCAAAAATA+TGG + Chr7:78128778-78128797 MsG0780040474.01.T01:intron 20.0%
!! AATTTAGATTTCTACAATTC+TGG - Chr7:78130659-78130678 None:intergenic 20.0%
!! ACATTTCAATTATACAAGTT+TGG - Chr7:78127101-78127120 None:intergenic 20.0%
!! ATTTATTGTTTCAACATCTT+GGG - Chr7:78126878-78126897 None:intergenic 20.0%
!! CTAAAATTCAAAGATATTCT+TGG + Chr7:78128150-78128169 MsG0780040474.01.T01:intron 20.0%
!! TGTTAATACTTAATAAGATG+AGG - Chr7:78127226-78127245 None:intergenic 20.0%
!! TTGAAAGAATTAAGAATCAA+AGG + Chr7:78130492-78130511 MsG0780040474.01.T01:intron 20.0%
!! TTTCTTCAATGAATGAAATT+CGG - Chr7:78131517-78131536 None:intergenic 20.0%
!!! TTGATTTGATTAGATTAGAT+TGG - Chr7:78127718-78127737 None:intergenic 20.0%
!!! TTTAATTTTCTCATTTCTCT+AGG - Chr7:78129699-78129718 None:intergenic 20.0%
! AAAATGAGAGTAAGATTCAT+CGG + Chr7:78128918-78128937 MsG0780040474.01.T01:intron 25.0%
! AATCCATTCAAAAAAATCCA+AGG + Chr7:78126895-78126914 MsG0780040474.01.T01:intron 25.0%
! AGAGATGATTAAGATTCAAA+AGG - Chr7:78130769-78130788 None:intergenic 25.0%
! ATCAAGATTTGAAAAGTTGA+CGG + Chr7:78128516-78128535 MsG0780040474.01.T01:intron 25.0%
! ATCATTTCATCTATCAAATC+AGG - Chr7:78129487-78129506 None:intergenic 25.0%
! ATCTAACAGTAATTTGAGTA+TGG - Chr7:78128273-78128292 None:intergenic 25.0%
! ATGTGAGAATACTGAATTTA+CGG - Chr7:78127603-78127622 None:intergenic 25.0%
! ATTTCTTCTTTATACTGTCA+TGG - Chr7:78128384-78128403 None:intergenic 25.0%
! CAATTTCTTAATGTAAGGTA+AGG - Chr7:78128694-78128713 None:intergenic 25.0%
! CACATATATAAAGTTGTTAC+CGG + Chr7:78129534-78129553 MsG0780040474.01.T01:intron 25.0%
! CTAATGTTTGATTCCAAAAT+AGG + Chr7:78127397-78127416 MsG0780040474.01.T01:intron 25.0%
! CTCTTAGAAAATTAGATATC+AGG + Chr7:78130568-78130587 MsG0780040474.01.T01:intron 25.0%
! GATTTATTGTTTCAACATCT+TGG - Chr7:78126879-78126898 None:intergenic 25.0%
! GTAAAGACTACAATAACAAA+TGG - Chr7:78126579-78126598 None:intergenic 25.0%
! TATTGAAAATGTTGCTACTA+TGG + Chr7:78128655-78128674 MsG0780040474.01.T01:intron 25.0%
! TCAGACAATTTCTTAATGTA+AGG - Chr7:78128699-78128718 None:intergenic 25.0%
! TCTTAATTCTTTCAACGAAA+GGG - Chr7:78130487-78130506 None:intergenic 25.0%
! TCTTGGAATGATACAAATTT+GGG - Chr7:78130869-78130888 None:intergenic 25.0%
! TGATTTGATCTTATTATGGA+TGG + Chr7:78129035-78129054 MsG0780040474.01.T01:intron 25.0%
! TTCAGTATTTGTGTATAGAT+AGG + Chr7:78130709-78130728 MsG0780040474.01.T01:intron 25.0%
! TTCTTAATTCTTTCAACGAA+AGG - Chr7:78130488-78130507 None:intergenic 25.0%
! TTGTAGTCTTTACATTTGAT+TGG + Chr7:78126586-78126605 MsG0780040474.01.T01:intron 25.0%
! TTTCATTCATTGAAGAAATC+TGG + Chr7:78131519-78131538 MsG0780040474.01.T01:CDS 25.0%
!! AATTTGAAGCTAATTAACCT+TGG - Chr7:78126915-78126934 None:intergenic 25.0%
!! ATAATCACCTTTTGTAACTT+TGG - Chr7:78130979-78130998 None:intergenic 25.0%
!! ATCAAACATCAGATTTTCAA+GGG - Chr7:78130227-78130246 None:intergenic 25.0%
!! ATGTTTGATGATATGTCAAT+GGG + Chr7:78130238-78130257 MsG0780040474.01.T01:intron 25.0%
!! GATGCATTTTCATAGTTAAA+TGG - Chr7:78129391-78129410 None:intergenic 25.0%
!! GTTCAATTTTCTGTATGAAT+GGG + Chr7:78126941-78126960 MsG0780040474.01.T01:intron 25.0%
!! TAATCACCTTTTGTAACTTT+GGG - Chr7:78130978-78130997 None:intergenic 25.0%
!! TAGTAGCAACATTTTCAATA+CGG - Chr7:78128655-78128674 None:intergenic 25.0%
!! TAGTATTTCCTTTCGTTTTA+TGG + Chr7:78127365-78127384 MsG0780040474.01.T01:intron 25.0%
!! TGTTCAATTTTCTGTATGAA+TGG + Chr7:78126940-78126959 MsG0780040474.01.T01:intron 25.0%
!! TTTTCATAGTTAAATGGAGT+AGG - Chr7:78129385-78129404 None:intergenic 25.0%
!!! AGATATTTTTTCCTAGCAAT+TGG + Chr7:78126611-78126630 MsG0780040474.01.T01:intron 25.0%
!!! CAAATCAATCACTTTTTTCT+CGG + Chr7:78127730-78127749 MsG0780040474.01.T01:intron 25.0%
!!! CTATTATTTTAATTCCTCGA+GGG - Chr7:78131269-78131288 None:intergenic 25.0%
!!! CTTTAACTTGTTATAGAACT+TGG - Chr7:78127005-78127024 None:intergenic 25.0%
!!! CTTTTTCAACTTTGAAGAAA+TGG + Chr7:78128083-78128102 MsG0780040474.01.T01:intron 25.0%
!!! GAAAGAAGTTCTAATTGTTT+TGG + Chr7:78128539-78128558 MsG0780040474.01.T01:intron 25.0%
!!! GCTTTGAAAAAAATAAGCAA+AGG + Chr7:78126507-78126526 MsG0780040474.01.T01:intron 25.0%
!!! TAACCTTGGATTTTTTTGAA+TGG - Chr7:78126901-78126920 None:intergenic 25.0%
!!! TCTAATTTTCTAAGAGAAGT+TGG - Chr7:78130564-78130583 None:intergenic 25.0%
!!! TCTATTATTTTAATTCCTCG+AGG - Chr7:78131270-78131289 None:intergenic 25.0%
AAATACTAACACGTCATGTA+TGG - Chr7:78127353-78127372 None:intergenic 30.0%
AACATACAATGATGTCAAGT+TGG - Chr7:78130908-78130927 None:intergenic 30.0%
AAGAAATTTGATGTTCAGCA+TGG + Chr7:78128397-78128416 MsG0780040474.01.T01:intron 30.0%
AAGAGATTGTTAGAAATGCA+AGG + Chr7:78128803-78128822 MsG0780040474.01.T01:intron 30.0%
AATACTAACACGTCATGTAT+GGG - Chr7:78127352-78127371 None:intergenic 30.0%
AATATTGAATCGTGACGAAA+TGG + Chr7:78127145-78127164 MsG0780040474.01.T01:intron 30.0%
AATCAAAGGAAGAGAGATAA+CGG + Chr7:78130506-78130525 MsG0780040474.01.T01:intron 30.0%
AATGATCCATTTGCGTTATT+TGG + Chr7:78129501-78129520 MsG0780040474.01.T01:intron 30.0%
AATGTTCTTCAAAATCTCCT+TGG + Chr7:78130827-78130846 MsG0780040474.01.T01:intron 30.0%
AATTCGGCCAAATTTAATTG+AGG - Chr7:78131501-78131520 None:intergenic 30.0%
ACAACCATACAAAGATAACT+CGG - Chr7:78130067-78130086 None:intergenic 30.0%
ACAAGTTTATGCATGTCATT+AGG - Chr7:78129628-78129647 None:intergenic 30.0%
ACATACAATGATGTCAAGTT+GGG - Chr7:78130907-78130926 None:intergenic 30.0%
AGAAATTGTCTGAAGATTGT+TGG + Chr7:78128706-78128725 MsG0780040474.01.T01:intron 30.0%
AGAAATTTGATGTTCAGCAT+GGG + Chr7:78128398-78128417 MsG0780040474.01.T01:intron 30.0%
AGAGATTGTTAGAAATGCAA+GGG + Chr7:78128804-78128823 MsG0780040474.01.T01:intron 30.0%
AGTATTAACATATCTTCCAC+TGG + Chr7:78127236-78127255 MsG0780040474.01.T01:intron 30.0%
ATAACAAGTTAAAGAGAGTC+TGG + Chr7:78127011-78127030 MsG0780040474.01.T01:intron 30.0%
ATACTTAATAAGATGAGGTG+AGG - Chr7:78127221-78127240 None:intergenic 30.0%
ATGCTTATCCATCTTTCAAT+TGG + Chr7:78131114-78131133 MsG0780040474.01.T01:intron 30.0%
ATGTTTGATTCCAAAATAGG+CGG + Chr7:78127400-78127419 MsG0780040474.01.T01:intron 30.0%
ATTCCGTAACATGTTCTTTA+AGG - Chr7:78127278-78127297 None:intergenic 30.0%
ATTTGTATCATTCCAAGAGA+CGG + Chr7:78130871-78130890 MsG0780040474.01.T01:intron 30.0%
CAAAGCATGAAACAATATTC+TGG + Chr7:78126749-78126768 MsG0780040474.01.T01:intron 30.0%
CAGTAAAACCATAAGTGTAA+TGG + Chr7:78126703-78126722 MsG0780040474.01.T01:intron 30.0%
CTCAAATTACTGTTAGATGA+TGG + Chr7:78128275-78128294 MsG0780040474.01.T01:intron 30.0%
CTCTTGGAATGATACAAATT+TGG - Chr7:78130870-78130889 None:intergenic 30.0%
CTTAATTCTTTCAACGAAAG+GGG - Chr7:78130486-78130505 None:intergenic 30.0%
CTTGGAATGATACAAATTTG+GGG - Chr7:78130868-78130887 None:intergenic 30.0%
GATGTGAGAACTATAAAATG+AGG - Chr7:78126670-78126689 None:intergenic 30.0%
GTACCTTAAAGAACATGTTA+CGG + Chr7:78127272-78127291 MsG0780040474.01.T01:intron 30.0%
GTATTAACATATCTTCCACT+GGG + Chr7:78127237-78127256 MsG0780040474.01.T01:intron 30.0%
GTGATTATATCTAATTGCCT+AGG + Chr7:78130991-78131010 MsG0780040474.01.T01:intron 30.0%
GTTTCATAGCATAACATCAT+GGG - Chr7:78126845-78126864 None:intergenic 30.0%
TACATATTACACAGTGAATC+CGG - Chr7:78129556-78129575 None:intergenic 30.0%
TACTTAATAAGATGAGGTGA+GGG - Chr7:78127220-78127239 None:intergenic 30.0%
TAGATTCAAGTGTATTAGAG+AGG - Chr7:78131335-78131354 None:intergenic 30.0%
TATACAAGTTTGGTTGTCAT+TGG - Chr7:78127091-78127110 None:intergenic 30.0%
TCAAGATTTGAAAAGTTGAC+GGG + Chr7:78128517-78128536 MsG0780040474.01.T01:intron 30.0%
TGAAAAATCCACTGAGAATA+TGG + Chr7:78128762-78128781 MsG0780040474.01.T01:intron 30.0%
TGAAAATTCACAAAGTGAGA+TGG + Chr7:78129932-78129951 MsG0780040474.01.T01:intron 30.0%
TGATGCATTATGCTACATTA+AGG + Chr7:78126197-78126216 MsG0780040474.01.T01:intron 30.0%
TGTTTCATAGCATAACATCA+TGG - Chr7:78126846-78126865 None:intergenic 30.0%
TTAGTTACAGTAGAGATTGA+AGG + Chr7:78130369-78130388 MsG0780040474.01.T01:intron 30.0%
TTATATCTAATTGCCTAGGA+TGG + Chr7:78130995-78131014 MsG0780040474.01.T01:intron 30.0%
TTATTGTTCACTGTATCCTA+AGG + Chr7:78128993-78129012 MsG0780040474.01.T01:intron 30.0%
! AAAAGAAGCATATGACTCAT+GGG - Chr7:78130279-78130298 None:intergenic 30.0%
! ACTTTAGAAGAAGTTGGTTA+TGG + Chr7:78129092-78129111 MsG0780040474.01.T01:intron 30.0%
! AGTAGCAACATTTTCAATAC+GGG - Chr7:78128654-78128673 None:intergenic 30.0%
! ATTTCCTTTCGTTTTATGGT+TGG + Chr7:78127369-78127388 MsG0780040474.01.T01:intron 30.0%
! CAACTTTGAAGAAATGGATA+TGG + Chr7:78128089-78128108 MsG0780040474.01.T01:intron 30.0%
! CAATCTCTTTGCCATATTTT+TGG - Chr7:78128792-78128811 None:intergenic 30.0%
! CATCAAACATCAGATTTTCA+AGG - Chr7:78130228-78130247 None:intergenic 30.0%
! CTTTAGAAGAAGTTGGTTAT+GGG + Chr7:78129093-78129112 MsG0780040474.01.T01:intron 30.0%
! GATGTTTGATGATATGTCAA+TGG + Chr7:78130237-78130256 MsG0780040474.01.T01:intron 30.0%
! GTTTCATGCTTTGTTGATAT+TGG - Chr7:78126742-78126761 None:intergenic 30.0%
! TATATATATCCCGCCTATTT+TGG - Chr7:78127413-78127432 None:intergenic 30.0%
! TCATCTGAAATATCATTTCC+AGG + Chr7:78130597-78130616 MsG0780040474.01.T01:intron 30.0%
!! ACATTTGAGTTGCTTTATTG+TGG + Chr7:78129728-78129747 MsG0780040474.01.T01:intron 30.0%
!! ATTTTGAAGAACATTCGAAG+AGG - Chr7:78130822-78130841 None:intergenic 30.0%
!! CATTTGAGTTGCTTTATTGT+GGG + Chr7:78129729-78129748 MsG0780040474.01.T01:intron 30.0%
!! TGAACCTGAATTTTCAAGAA+CGG + Chr7:78130173-78130192 MsG0780040474.01.T01:intron 30.0%
!! TGATCATTTCGATGTTTTGA+AGG + Chr7:78128431-78128450 MsG0780040474.01.T01:intron 30.0%
!! TGGAGAGTTCTATTTTAGAA+CGG + Chr7:78129220-78129239 MsG0780040474.01.T01:intron 30.0%
!! TTACATTTTCCATAGCTCTA+GGG - Chr7:78131207-78131226 None:intergenic 30.0%
!!! AGAGTTTTAGGTTTTATGTG+GGG + Chr7:78126540-78126559 MsG0780040474.01.T01:intron 30.0%
!!! AGATCATTTTTTCATCGTTC+TGG + Chr7:78129136-78129155 MsG0780040474.01.T01:intron 30.0%
!!! ATTTTAGAACGGAAAGAACT+AGG + Chr7:78129231-78129250 MsG0780040474.01.T01:intron 30.0%
!!! GAGAGTTTTAGGTTTTATGT+GGG + Chr7:78126539-78126558 MsG0780040474.01.T01:intron 30.0%
!!! GATCATTTTTTCATCGTTCT+GGG + Chr7:78129137-78129156 MsG0780040474.01.T01:intron 30.0%
!!! TAATTGTTTTGGATGATGTC+TGG + Chr7:78128550-78128569 MsG0780040474.01.T01:intron 30.0%
!!! TGAGAGTTTTAGGTTTTATG+TGG + Chr7:78126538-78126557 MsG0780040474.01.T01:intron 30.0%
!!! TGTTGACTCATTTTATCCTA+GGG + Chr7:78126972-78126991 MsG0780040474.01.T01:intron 30.0%
!!! TTTTAGAACGGAAAGAACTA+GGG + Chr7:78129232-78129251 MsG0780040474.01.T01:intron 30.0%
AAAATGTAAGTTGCACACGT+TGG + Chr7:78131218-78131237 MsG0780040474.01.T01:intron 35.0%
AAACTTTGGGCCAAATTTGA+GGG - Chr7:78131397-78131416 None:intergenic 35.0%
AAAGAAGGTTGACGTCAATT+TGG + Chr7:78127853-78127872 MsG0780040474.01.T01:intron 35.0%
AAAGTCCATTCAAACTTCCT+AGG - Chr7:78131625-78131644 None:intergenic 35.0%
AAATGATAAGTGACGAGTCT+TGG - Chr7:78129276-78129295 None:intergenic 35.0%
AAGATAACTCGGTCAAATTG+TGG - Chr7:78130056-78130075 None:intergenic 35.0%
AAGTCCATTCAAACTTCCTA+GGG - Chr7:78131624-78131643 None:intergenic 35.0%
AATAATAGACTGTCCCAAGT+TGG + Chr7:78131281-78131300 MsG0780040474.01.T01:intron 35.0%
ACTAGGGAAAGAAACAAAGA+TGG + Chr7:78129248-78129267 MsG0780040474.01.T01:intron 35.0%
AGAAGCTGTTCTTTATGATG+CGG + Chr7:78127907-78127926 MsG0780040474.01.T01:intron 35.0%
AGAGATCCAAATAACGCAAA+TGG - Chr7:78129510-78129529 None:intergenic 35.0%
AGCTCATCTCTAACTTCAAT+AGG + Chr7:78131090-78131109 MsG0780040474.01.T01:intron 35.0%
AGCTTCAACCATTACACTTA+TGG - Chr7:78126714-78126733 None:intergenic 35.0%
ATCACCGTTCTTGAAAATTC+AGG - Chr7:78130180-78130199 None:intergenic 35.0%
ATCTCTACTGTAACTAAAGC+AGG - Chr7:78130366-78130385 None:intergenic 35.0%
ATGCCTTTAAATTAGCACAG+CGG - Chr7:78130931-78130950 None:intergenic 35.0%
CACAAAGTGAGATGGATATA+CGG + Chr7:78129940-78129959 MsG0780040474.01.T01:intron 35.0%
CACAATCCATCAACTTTCTT+CGG - Chr7:78126326-78126345 None:intergenic 35.0%
CATGATTTAGCAACGTTGAT+AGG + Chr7:78129197-78129216 MsG0780040474.01.T01:intron 35.0%
CCTACCAAATATGTTACATC+CGG - Chr7:78128234-78128253 None:intergenic 35.0%
CGGATGTAACATATTTGGTA+GGG + Chr7:78128232-78128251 MsG0780040474.01.T01:intron 35.0%
CTAGATATAGTTGGATACAG+AGG + Chr7:78129994-78130013 MsG0780040474.01.T01:intron 35.0%
CTCATGAACTTGACAATTTG+TGG + Chr7:78130129-78130148 MsG0780040474.01.T01:intron 35.0%
CTGAAAAGGCTAGATATAGT+TGG + Chr7:78129985-78130004 MsG0780040474.01.T01:intron 35.0%
CTGGATGTACAAACTCTTTA+AGG - Chr7:78130640-78130659 None:intergenic 35.0%
CTTATCCATCTTTCAATTGG+AGG + Chr7:78131117-78131136 MsG0780040474.01.T01:intron 35.0%
CTTCTCGCCTCAATTAAATT+TGG + Chr7:78131491-78131510 MsG0780040474.01.T01:intron 35.0%
GAAGGTTACAAAGAACATTG+CGG + Chr7:78128449-78128468 MsG0780040474.01.T01:intron 35.0%
GTAAGGTAAGGTGAAAAGTT+TGG - Chr7:78128682-78128701 None:intergenic 35.0%
GTACTTCTTATCACTTATCC+TGG - Chr7:78129865-78129884 None:intergenic 35.0%
TAGCAGAAATGTGATCCAAA+AGG - Chr7:78128009-78128028 None:intergenic 35.0%
TCAGGCAATGCATAAAGATA+TGG - Chr7:78129469-78129488 None:intergenic 35.0%
TCTCGCAATTCCTGATATTA+GGG - Chr7:78131060-78131079 None:intergenic 35.0%
TGATGAATAACAGGACACAA+AGG - Chr7:78131661-78131680 None:intergenic 35.0%
TGTCATGGTTGTAACAGATT+GGG - Chr7:78128369-78128388 None:intergenic 35.0%
TGTGAAAACACCCTCAAATT+TGG + Chr7:78131384-78131403 MsG0780040474.01.T01:intron 35.0%
TGTTTGATTCCAAAATAGGC+GGG + Chr7:78127401-78127420 MsG0780040474.01.T01:intron 35.0%
TTATCGAATTCGTAGTCCTT+AGG - Chr7:78129012-78129031 None:intergenic 35.0%
TTCAAGAGAAAAGACATGCA+TGG - Chr7:78128746-78128765 None:intergenic 35.0%
TTCTCGCAATTCCTGATATT+AGG - Chr7:78131061-78131080 None:intergenic 35.0%
TTCTGTATGAATGGGTCATT+TGG + Chr7:78126949-78126968 MsG0780040474.01.T01:intron 35.0%
TTGACCGAGTTATCTTTGTA+TGG + Chr7:78130060-78130079 MsG0780040474.01.T01:intron 35.0%
TTGGATATCCATATTCTCAG+TGG - Chr7:78128773-78128792 None:intergenic 35.0%
TTGGCAAAGCAAAACATCTT+AGG + Chr7:78129335-78129354 MsG0780040474.01.T01:intron 35.0%
TTGTGTCCTGTTATTCATCA+AGG + Chr7:78131661-78131680 MsG0780040474.01.T01:intron 35.0%
TTTCACTACAACCAATTGCT+AGG - Chr7:78126625-78126644 None:intergenic 35.0%
TTTGCCAACCATAAAACGAA+AGG - Chr7:78127376-78127395 None:intergenic 35.0%
! ACGGTGGAATACTCTTTTAA+GGG + Chr7:78128586-78128605 MsG0780040474.01.T01:intron 35.0%
! CTTACATTTTCCATAGCTCT+AGG - Chr7:78131208-78131227 None:intergenic 35.0%
! GAAAAGAAGCATATGACTCA+TGG - Chr7:78130280-78130299 None:intergenic 35.0%
! TACAAACTCTTTAAGGATGC+AGG - Chr7:78130633-78130652 None:intergenic 35.0%
! TGTTTTATGCTTCCATCACT+TGG + Chr7:78130093-78130112 MsG0780040474.01.T01:intron 35.0%
! TTATGTAGCTGATGACCTTT+TGG + Chr7:78127991-78128010 MsG0780040474.01.T01:intron 35.0%
! TTTTCTCCATGATGAGTATC+TGG - Chr7:78131598-78131617 None:intergenic 35.0%
!! AAACATCAGATTTTCAAGGG+AGG - Chr7:78130224-78130243 None:intergenic 35.0%
!! AACATCAGATTTTCAAGGGA+GGG - Chr7:78130223-78130242 None:intergenic 35.0%
!! AAGTGATAAGAAGTACCTTG+AGG + Chr7:78129869-78129888 MsG0780040474.01.T01:intron 35.0%
!! ATTTTCTAAGAGAAGTTGGC+AGG - Chr7:78130560-78130579 None:intergenic 35.0%
!! CAACTATATCTAGCCTTTTC+AGG - Chr7:78129987-78130006 None:intergenic 35.0%
!! GATTTTGATGGCTTCAAAGA+TGG - Chr7:78130535-78130554 None:intergenic 35.0%
!! TAAGAAGTACCTTGAGGAAT+TGG + Chr7:78129875-78129894 MsG0780040474.01.T01:intron 35.0%
!! TTCTAAAGTCTTCCCATTTC+CGG - Chr7:78129081-78129100 None:intergenic 35.0%
!! TTTTAAGGGCCTTTTCAATG+CGG + Chr7:78128600-78128619 MsG0780040474.01.T01:intron 35.0%
!! TTTTCTAAGAGAAGTTGGCA+GGG - Chr7:78130559-78130578 None:intergenic 35.0%
!!! AATTTGAGGGTGTTTTCACA+CGG - Chr7:78131384-78131403 None:intergenic 35.0%
!!! GAGAAGCTTATTTTGTGACA+AGG - Chr7:78130956-78130975 None:intergenic 35.0%
!!! GTGTTGACTCATTTTATCCT+AGG + Chr7:78126971-78126990 MsG0780040474.01.T01:intron 35.0%
AACTACTCGGATGAAAAAGG+AGG + Chr7:78128036-78128055 MsG0780040474.01.T01:intron 40.0%
AACTTCAATGCGCTTGATGT+GGG - Chr7:78131421-78131440 None:intergenic 40.0%
AAGACTCTGCTGTTAACAAC+TGG + Chr7:78127945-78127964 MsG0780040474.01.T01:intron 40.0%
AAGGCTTGCATCAGAATCTA+TGG + Chr7:78131680-78131699 MsG0780040474.01.T01:intron 40.0%
AAGTACTCTGATCCTCAGAA+AGG + Chr7:78126408-78126427 MsG0780040474.01.T01:intron 40.0%
AAGTCCATTCAAGCTTTCCT+AGG - Chr7:78126060-78126079 None:intergenic 40.0%
AATCACAAGGGACTTCATAC+AGG - Chr7:78130302-78130321 None:intergenic 40.0%
ACTACTCGGATGAAAAAGGA+GGG + Chr7:78128037-78128056 MsG0780040474.01.T01:intron 40.0%
AGAGTTCCACTGATATCAGA+TGG - Chr7:78129660-78129679 None:intergenic 40.0%
AGCTTGAGATCCCTAATATC+AGG + Chr7:78131047-78131066 MsG0780040474.01.T01:intron 40.0%
AGGAATTGCGAGAAATTACG+AGG + Chr7:78131067-78131086 MsG0780040474.01.T01:intron 40.0%
ATCAAGGGATTTCGAGATGA+TGG + Chr7:78126150-78126169 MsG0780040474.01.T01:intron 40.0%
ATCAGAATCTATGGTTCCTC+CGG + Chr7:78131689-78131708 MsG0780040474.01.T01:intron 40.0%
ATGGACCTCCAATTGAAAGA+TGG - Chr7:78131125-78131144 None:intergenic 40.0%
ATGTATCACTAACCTGCGTA+TGG - Chr7:78130433-78130452 None:intergenic 40.0%
ATTCCAACTCCAATTCCTCA+AGG - Chr7:78129887-78129906 None:intergenic 40.0%
ATTTCCAAAGCTGCTTGATC+CGG - Chr7:78131711-78131730 None:intergenic 40.0%
CAAGTTCAGTGATCTAGTCT+TGG + Chr7:78129298-78129317 MsG0780040474.01.T01:intron 40.0%
CACACAAAGTCATTAACCTC+AGG - Chr7:78131548-78131567 None:intergenic 40.0%
CAGAGATACACAGTTCACAA+AGG + Chr7:78127642-78127661 MsG0780040474.01.T01:intron 40.0%
CCGGATGTAACATATTTGGT+AGG + Chr7:78128231-78128250 MsG0780040474.01.T01:intron 40.0%
CGCATTGAAGTTAACTACGA+TGG + Chr7:78131429-78131448 MsG0780040474.01.T01:intron 40.0%
CTGATATCAGTGGAACTCTT+AGG + Chr7:78129661-78129680 MsG0780040474.01.T01:intron 40.0%
CTGTCATGGTTGTAACAGAT+TGG - Chr7:78128370-78128389 None:intergenic 40.0%
CTTGGAAGACTTCGATATGT+TGG + Chr7:78129316-78129335 MsG0780040474.01.T01:intron 40.0%
GAAACGAACAGGAACACAAA+AGG - Chr7:78126097-78126116 None:intergenic 40.0%
GAAACTTTGGGCCAAATTTG+AGG - Chr7:78131398-78131417 None:intergenic 40.0%
GAATCTATAGATGTCTCTGC+TGG + Chr7:78131348-78131367 MsG0780040474.01.T01:intron 40.0%
GATATTAGGGATCTCAAGCT+AGG - Chr7:78131047-78131066 None:intergenic 40.0%
GATGCCGGATGTAACATATT+TGG + Chr7:78128227-78128246 MsG0780040474.01.T01:intron 40.0%
GCTTCTCCCAAAGTTACAAA+AGG + Chr7:78130969-78130988 MsG0780040474.01.T01:intron 40.0%
GGAACACTTTCAGATCTTCA+CGG + Chr7:78129783-78129802 MsG0780040474.01.T01:intron 40.0%
GGATTTAGCAAGACTGAACA+GGG + Chr7:78131450-78131469 MsG0780040474.01.T01:intron 40.0%
GTAAATGTGACATCAGGGAT+TGG + Chr7:78128868-78128887 MsG0780040474.01.T01:intron 40.0%
GTTACTCCGAAGAAAGTTGA+TGG + Chr7:78126317-78126336 MsG0780040474.01.T01:intron 40.0%
GTTCCGCTGTGCTAATTTAA+AGG + Chr7:78130925-78130944 MsG0780040474.01.T01:intron 40.0%
TAACTCGGTCAAATTGTGGT+AGG - Chr7:78130052-78130071 None:intergenic 40.0%
TAACTTCAATGCGCTTGATG+TGG - Chr7:78131422-78131441 None:intergenic 40.0%
TCAACTTTCTTCGGAGTAAC+CGG - Chr7:78126317-78126336 None:intergenic 40.0%
TCATGACCAGATACTCATCA+TGG + Chr7:78131589-78131608 MsG0780040474.01.T01:CDS 40.0%
TGACGTCAATTTGGTACAAC+CGG + Chr7:78127862-78127881 MsG0780040474.01.T01:intron 40.0%
TGCAAGCCTTGATGAATAAC+AGG - Chr7:78131670-78131689 None:intergenic 40.0%
TGGATTTAGCAAGACTGAAC+AGG + Chr7:78131449-78131468 MsG0780040474.01.T01:intron 40.0%
TGTAACAGATTGGGCTAAAG+TGG - Chr7:78128360-78128379 None:intergenic 40.0%
TTACCAACTGTCCTAGACTA+CGG + Chr7:78130320-78130339 MsG0780040474.01.T01:intron 40.0%
TTCAAGTGTATTAGAGAGGC+AGG - Chr7:78131331-78131350 None:intergenic 40.0%
TTCACAAGGATTTGATGCAC+TGG + Chr7:78127040-78127059 MsG0780040474.01.T01:intron 40.0%
TTCAGTATTCTCACATGCCA+AGG + Chr7:78127607-78127626 MsG0780040474.01.T01:intron 40.0%
TTGAATCGTGACGAAATGGA+TGG + Chr7:78127149-78127168 MsG0780040474.01.T01:intron 40.0%
TTGAGGAATTGGAGTTGGAA+TGG + Chr7:78129886-78129905 MsG0780040474.01.T01:intron 40.0%
TTGAGTGTCTCATTCCAAAC+AGG - Chr7:78126286-78126305 None:intergenic 40.0%
TTGCGTTATTTGGATCTCTC+TGG + Chr7:78129511-78129530 MsG0780040474.01.T01:intron 40.0%
! AACAGGAACACAAAAGGTGT+CGG - Chr7:78126091-78126110 None:intergenic 40.0%
! ATAACAGGACACAAAGGTGT+AGG - Chr7:78131655-78131674 None:intergenic 40.0%
! CATGCTTTGTTGATATTGGC+TGG - Chr7:78126738-78126757 None:intergenic 40.0%
! CCTTTAGTTCCGCATTGAAA+AGG - Chr7:78128612-78128631 None:intergenic 40.0%
! CCTTTTCAATGCGGAACTAA+AGG + Chr7:78128609-78128628 MsG0780040474.01.T01:intron 40.0%
! GACGGTGGAATACTCTTTTA+AGG + Chr7:78128585-78128604 MsG0780040474.01.T01:intron 40.0%
! GATATGTCAATGGGAAGTGT+TGG + Chr7:78130247-78130266 MsG0780040474.01.T01:intron 40.0%
! GATTTAGCAACGTTGATAGG+TGG + Chr7:78129200-78129219 MsG0780040474.01.T01:intron 40.0%
! GCTCATTTTCTCTCTGAGTT+GGG + Chr7:78126172-78126191 MsG0780040474.01.T01:intron 40.0%
! GGAAGTTGCATGAGAGTTTT+AGG + Chr7:78126528-78126547 MsG0780040474.01.T01:intron 40.0%
! GGGAAGACTTTAGAAGAAGT+TGG + Chr7:78129086-78129105 MsG0780040474.01.T01:intron 40.0%
!! AGGACAGTTGGTAATCACAA+GGG - Chr7:78130314-78130333 None:intergenic 40.0%
!! CTTTTTCATCCGAGTAGTTG+CGG - Chr7:78128035-78128054 None:intergenic 40.0%
!! GAAAGTTGATGGATTGTGCT+AGG + Chr7:78126328-78126347 MsG0780040474.01.T01:intron 40.0%
!! TAACAACAGCTTTGAAGCGT+TGG + Chr7:78129836-78129855 MsG0780040474.01.T01:intron 40.0%
!! TAGGACAGTTGGTAATCACA+AGG - Chr7:78130315-78130334 None:intergenic 40.0%
!! TCAAGCAGCTTTGGAAATGA+TGG + Chr7:78131713-78131732 MsG0780040474.01.T01:intron 40.0%
!! TTGTTGGTGAGTTTTCACTC+TGG + Chr7:78126351-78126370 MsG0780040474.01.T01:intron 40.0%
!!! ATCTAGCCTTTTCAGGTACT+TGG - Chr7:78129980-78129999 None:intergenic 40.0%
!!! TTTTTCATCGTTCTGGGAGT+GGG + Chr7:78129143-78129162 MsG0780040474.01.T01:intron 40.0%
!!! TTTTTTCATCGTTCTGGGAG+TGG + Chr7:78129142-78129161 MsG0780040474.01.T01:intron 40.0%
AATACTGAAGCCCACTCATG+CGG - Chr7:78130698-78130717 None:intergenic 45.0%
ACCACCCTAGGAAGTTTGAA+TGG + Chr7:78131617-78131636 MsG0780040474.01.T01:intron 45.0%
ACTTCAATGCGCTTGATGTG+GGG - Chr7:78131420-78131439 None:intergenic 45.0%
ACTTGCTTCTTCTCTCCCAA+GGG + Chr7:78130401-78130420 MsG0780040474.01.T01:intron 45.0%
ACTTGTGTGATCGCCATAGT+TGG + Chr7:78128314-78128333 MsG0780040474.01.T01:intron 45.0%
AGAACTTGGACAATCTCCCT+AGG - Chr7:78126991-78127010 None:intergenic 45.0%
AGCAGAAGATTCTTTGCAGG+TGG - Chr7:78126450-78126469 None:intergenic 45.0%
AGGATGGAGACATTTCCTGA+AGG + Chr7:78131011-78131030 MsG0780040474.01.T01:intron 45.0%
AGGCACAAGATTTCCAGCAT+GGG + Chr7:78130014-78130033 MsG0780040474.01.T01:intron 45.0%
ATAGTTGGCATGGGTGGAAT+GGG + Chr7:78128329-78128348 MsG0780040474.01.T01:intron 45.0%
ATCACTAACCTGCGTATGGA+AGG - Chr7:78130429-78130448 None:intergenic 45.0%
ATCATGGAGAAAACCACCCT+AGG + Chr7:78131605-78131624 MsG0780040474.01.T01:CDS 45.0%
ATGGAGACATTTCCTGAAGG+GGG + Chr7:78131014-78131033 MsG0780040474.01.T01:intron 45.0%
ATTAGGGATCTCAAGCTAGG+CGG - Chr7:78131044-78131063 None:intergenic 45.0%
CATTGAGCAAGACTCCTGTT+TGG + Chr7:78126269-78126288 MsG0780040474.01.T01:intron 45.0%
CCATCCTAGGAAAGCTTGAA+TGG + Chr7:78126053-78126072 MsG0780040474.01.T01:CDS 45.0%
CCATTCAAGCTTTCCTAGGA+TGG - Chr7:78126056-78126075 None:intergenic 45.0%
CCTTTAGCAGCACAATCACT+CGG + Chr7:78128831-78128850 MsG0780040474.01.T01:intron 45.0%
CGCAACTACTCGGATGAAAA+AGG + Chr7:78128033-78128052 MsG0780040474.01.T01:intron 45.0%
CGGAGGCTGTAAAAGATCTT+CGG - Chr7:78129061-78129080 None:intergenic 45.0%
CTACTCGGATGAAAAAGGAG+GGG + Chr7:78128038-78128057 MsG0780040474.01.T01:intron 45.0%
CTCGAAATCCCTTGATCAGA+AGG - Chr7:78126146-78126165 None:intergenic 45.0%
CTGCAGTTCCTTCTGATCAA+GGG + Chr7:78126135-78126154 MsG0780040474.01.T01:intron 45.0%
CTTTAGCAGCACAATCACTC+GGG + Chr7:78128832-78128851 MsG0780040474.01.T01:intron 45.0%
GACTGAACAGGGACTTCTAA+CGG + Chr7:78131461-78131480 MsG0780040474.01.T01:intron 45.0%
GAGACACTCAAGATGCATAC+CGG + Chr7:78126295-78126314 MsG0780040474.01.T01:intron 45.0%
GAGCGTATTTGTCCAAGTGA+TGG - Chr7:78130108-78130127 None:intergenic 45.0%
GAGTCTGGCTAATCTTCACA+AGG + Chr7:78127026-78127045 MsG0780040474.01.T01:intron 45.0%
GAGTGTAAGCTCTATCTGAG+AGG - Chr7:78131571-78131590 None:intergenic 45.0%
GATGCAGGTAAACAATCTCC+TGG - Chr7:78130618-78130637 None:intergenic 45.0%
GATGGAGACATTTCCTGAAG+GGG + Chr7:78131013-78131032 MsG0780040474.01.T01:intron 45.0%
GCGAGGTAAATGTGACATCA+GGG + Chr7:78128863-78128882 MsG0780040474.01.T01:intron 45.0%
GCTTGATGTGGGGAAACTTT+GGG - Chr7:78131410-78131429 None:intergenic 45.0%
GGATGGAGACATTTCCTGAA+GGG + Chr7:78131012-78131031 MsG0780040474.01.T01:intron 45.0%
GGCACTCTCTAATTTCACCA+AGG - Chr7:78130847-78130866 None:intergenic 45.0%
GGTAGCAGAAGATTCTTTGC+AGG - Chr7:78126453-78126472 None:intergenic 45.0%
GGTTACAAAGAACATTGCGG+AGG + Chr7:78128452-78128471 MsG0780040474.01.T01:intron 45.0%
GTACCTTGAGGAATTGGAGT+TGG + Chr7:78129881-78129900 MsG0780040474.01.T01:intron 45.0%
GTCTGGACTGAGGATTATGA+CGG + Chr7:78128567-78128586 MsG0780040474.01.T01:intron 45.0%
GTGTTCCTGTTCGTTTCATC+AGG + Chr7:78126100-78126119 MsG0780040474.01.T01:intron 45.0%
TAAAGTCTTCCCATTTCCGG+AGG - Chr7:78129078-78129097 None:intergenic 45.0%
TACCAACTGTCCTAGACTAC+GGG + Chr7:78130321-78130340 MsG0780040474.01.T01:intron 45.0%
TACGAGTTAGTATGACCCAG+TGG - Chr7:78127255-78127274 None:intergenic 45.0%
TACTCGGATGAAAAAGGAGG+GGG + Chr7:78128039-78128058 MsG0780040474.01.T01:intron 45.0%
TCAAAAGCTCTCTTCTCCTC+AGG + Chr7:78127811-78127830 MsG0780040474.01.T01:intron 45.0%
TCAATTGGAGGTCCATGTGA+TGG + Chr7:78131129-78131148 MsG0780040474.01.T01:intron 45.0%
TCAGGAAATGTCTCCATCCT+AGG - Chr7:78131011-78131030 None:intergenic 45.0%
TCCATTCAAACTTCCTAGGG+TGG - Chr7:78131621-78131640 None:intergenic 45.0%
TCGGTCAAATTGTGGTAGGA+AGG - Chr7:78130048-78130067 None:intergenic 45.0%
TCTGCAGTTCCTTCTGATCA+AGG + Chr7:78126134-78126153 MsG0780040474.01.T01:intron 45.0%
TGAAGAAATCTGGACACCTG+AGG + Chr7:78131529-78131548 MsG0780040474.01.T01:CDS 45.0%
TGACGTCAACCTTCTTTCCA+CGG - Chr7:78127850-78127869 None:intergenic 45.0%
TGACTTGATCCGTGGAAAGA+AGG + Chr7:78127838-78127857 MsG0780040474.01.T01:intron 45.0%
TGCAAATTTCCCCGTAGTCT+AGG - Chr7:78130334-78130353 None:intergenic 45.0%
TGCGAGGTAAATGTGACATC+AGG + Chr7:78128862-78128881 MsG0780040474.01.T01:intron 45.0%
TGCTGAGAATGGAAAGCTGA+AGG + Chr7:78126374-78126393 MsG0780040474.01.T01:intron 45.0%
TGGTAGGGATCAAGACAAAG+AGG + Chr7:78128247-78128266 MsG0780040474.01.T01:intron 45.0%
TTAATTCCTCGAGGGATGTG+AGG - Chr7:78131261-78131280 None:intergenic 45.0%
TTGGGAGAGAAGAAGCAAGT+TGG - Chr7:78130401-78130420 None:intergenic 45.0%
TTTAGCAGCACAATCACTCG+GGG + Chr7:78128833-78128852 MsG0780040474.01.T01:intron 45.0%
TTTGCGCCATCTGATATCAG+TGG + Chr7:78129651-78129670 MsG0780040474.01.T01:intron 45.0%
TTTGGATGATGTCTGGACTG+AGG + Chr7:78128557-78128576 MsG0780040474.01.T01:intron 45.0%
! AACTTGCTTCTTCTCTCCCA+AGG + Chr7:78130400-78130419 MsG0780040474.01.T01:intron 45.0%
! AATAGACTGTCCCAAGTTGG+AGG + Chr7:78131284-78131303 MsG0780040474.01.T01:intron 45.0%
! AGTTGGCAGGGTGATTTTGA+TGG - Chr7:78130547-78130566 None:intergenic 45.0%
! ATTGCACTGACCACTCTTCT+GGG + Chr7:78128183-78128202 MsG0780040474.01.T01:intron 45.0%
! CGAAGATCTTTTACAGCCTC+CGG + Chr7:78129059-78129078 MsG0780040474.01.T01:intron 45.0%
! CTTTTACAGCCTCCGGAAAT+GGG + Chr7:78129066-78129085 MsG0780040474.01.T01:intron 45.0%
! GCATACAGAGTGTTCTTCAC+CGG - Chr7:78127884-78127903 None:intergenic 45.0%
! GCTCGTTTTCTCTCTGAGTT+GGG + Chr7:78131735-78131754 MsG0780040474.01.T01:CDS 45.0%
! GGCTCATTTTCTCTCTGAGT+TGG + Chr7:78126171-78126190 MsG0780040474.01.T01:intron 45.0%
! TCTTTTACAGCCTCCGGAAA+TGG + Chr7:78129065-78129084 MsG0780040474.01.T01:intron 45.0%
! TGTCCCAAGTTGGAGGAATT+TGG + Chr7:78131291-78131310 MsG0780040474.01.T01:intron 45.0%
! TTTCACTCTGGTGCTGAGAA+TGG + Chr7:78126363-78126382 MsG0780040474.01.T01:intron 45.0%
!! AACAAAGCATCGCTTCAAGC+AGG - Chr7:78128974-78128993 None:intergenic 45.0%
!! ACAAAGCATCGCTTCAAGCA+GGG - Chr7:78128973-78128992 None:intergenic 45.0%
!! CAGATTTTCAAGGGAGGGAA+AGG - Chr7:78130218-78130237 None:intergenic 45.0%
!! GATGGATTGTGCTAGGTTGT+TGG + Chr7:78126335-78126354 MsG0780040474.01.T01:intron 45.0%
!!! TTTTTTCTCGGTCGAGACCA+TGG + Chr7:78127742-78127761 MsG0780040474.01.T01:intron 45.0%
AAACAAAGCCACCGCATGAG+TGG + Chr7:78130684-78130703 MsG0780040474.01.T01:intron 50.0%
AACAAAGCCACCGCATGAGT+GGG + Chr7:78130685-78130704 MsG0780040474.01.T01:intron 50.0%
ACCAACTGTCCTAGACTACG+GGG + Chr7:78130322-78130341 MsG0780040474.01.T01:intron 50.0%
AGCAACGCTAAACCCCATTG+GGG - Chr7:78131167-78131186 None:intergenic 50.0%
AGCCTGCCAAGTACCTGAAA+AGG + Chr7:78129971-78129990 MsG0780040474.01.T01:intron 50.0%
AGCGAAAGGGATCAAGGAAC+TGG + Chr7:78129761-78129780 MsG0780040474.01.T01:intron 50.0%
AGTTGCACACGTTGGAGTGT+AGG + Chr7:78131226-78131245 MsG0780040474.01.T01:intron 50.0%
ATGGAGTTCTCCCAGAAGAG+TGG - Chr7:78128196-78128215 None:intergenic 50.0%
CAGCAACGCTAAACCCCATT+GGG - Chr7:78131168-78131187 None:intergenic 50.0%
CATAGTTGGCATGGGTGGAA+TGG + Chr7:78128328-78128347 MsG0780040474.01.T01:intron 50.0%
CATTCCACCCATGCCAACTA+TGG - Chr7:78128330-78128349 None:intergenic 50.0%
CCATCTACCTCTCTAGATGC+CGG + Chr7:78128212-78128231 MsG0780040474.01.T01:intron 50.0%
CCGCCAAATTCCTCCAACTT+GGG - Chr7:78131297-78131316 None:intergenic 50.0%
CCTCAGCAGTTTATGCAGCA+AGG + Chr7:78126242-78126261 MsG0780040474.01.T01:intron 50.0%
CCTTGCTGCATAAACTGCTG+AGG - Chr7:78126245-78126264 None:intergenic 50.0%
CGCTTGATGTGGGGAAACTT+TGG - Chr7:78131411-78131430 None:intergenic 50.0%
CGGATCAAGTCAAGAACCTG+AGG - Chr7:78127830-78127849 None:intergenic 50.0%
CTCTGAACTGTGTGTTGCCT+TGG - Chr7:78127627-78127646 None:intergenic 50.0%
CTGCTAAAGCCGCAACTACT+CGG + Chr7:78128023-78128042 MsG0780040474.01.T01:intron 50.0%
GAGGCACAAGATTTCCAGCA+TGG + Chr7:78130013-78130032 MsG0780040474.01.T01:intron 50.0%
GCATGAAGCGAAAGGGATCA+AGG + Chr7:78129755-78129774 MsG0780040474.01.T01:intron 50.0%
GCGAAAGGGATCAAGGAACT+GGG + Chr7:78129762-78129781 MsG0780040474.01.T01:intron 50.0%
GGAATGGTCTGAAGATGCTG+CGG + Chr7:78129902-78129921 MsG0780040474.01.T01:intron 50.0%
GTGATCGCCATAGTTGGCAT+GGG + Chr7:78128320-78128339 MsG0780040474.01.T01:intron 50.0%
GTTACATCCGGCATCTAGAG+AGG - Chr7:78128222-78128241 None:intergenic 50.0%
GTTGCACACGTTGGAGTGTA+GGG + Chr7:78131227-78131246 MsG0780040474.01.T01:intron 50.0%
TGATCCCTTTCGCTTCATGC+TGG - Chr7:78129755-78129774 None:intergenic 50.0%
TGCAGCCTGATGAAACGAAC+AGG - Chr7:78126108-78126127 None:intergenic 50.0%
TGGACTGAGGATTATGACGG+TGG + Chr7:78128570-78128589 MsG0780040474.01.T01:intron 50.0%
TGTGATCGCCATAGTTGGCA+TGG + Chr7:78128319-78128338 MsG0780040474.01.T01:intron 50.0%
TTAGCAGCACAATCACTCGG+GGG + Chr7:78128834-78128853 MsG0780040474.01.T01:intron 50.0%
TTCACCAACAGTAGCTGCCA+TGG - Chr7:78127762-78127781 None:intergenic 50.0%
TTGCACACGTTGGAGTGTAG+GGG + Chr7:78131228-78131247 MsG0780040474.01.T01:intron 50.0%
! CAGGTTCTTGACTTGATCCG+TGG + Chr7:78127830-78127849 MsG0780040474.01.T01:intron 50.0%
! CATTGCACTGACCACTCTTC+TGG + Chr7:78128182-78128201 MsG0780040474.01.T01:intron 50.0%
! CCAAGTTGGAGGAATTTGGC+GGG + Chr7:78131295-78131314 MsG0780040474.01.T01:intron 50.0%
! CCCAAGTTGGAGGAATTTGG+CGG + Chr7:78131294-78131313 MsG0780040474.01.T01:intron 50.0%
! CCGAGTGATTGTGCTGCTAA+AGG - Chr7:78128834-78128853 None:intergenic 50.0%
! GGCTCGTTTTCTCTCTGAGT+TGG + Chr7:78131734-78131753 MsG0780040474.01.T01:CDS 50.0%
!! CAACAGCTTTGAAGCGTTGG+AGG + Chr7:78129839-78129858 MsG0780040474.01.T01:intron 50.0%
!! CCATAGCTCTAGGGAAGTCA+GGG - Chr7:78131198-78131217 None:intergenic 50.0%
!! GAACACAAAAGGTGTCGGCA+CGG - Chr7:78126086-78126105 None:intergenic 50.0%
!! TCCATAGCTCTAGGGAAGTC+AGG - Chr7:78131199-78131218 None:intergenic 50.0%
!!! AGCCTTTTCAGGTACTTGGC+AGG - Chr7:78129976-78129995 None:intergenic 50.0%
AAGGAGTCGACGCCATCACA+TGG - Chr7:78131144-78131163 None:intergenic 55.0%
ACGCTAAACCCCATTGGGGA+AGG - Chr7:78131163-78131182 None:intergenic 55.0%
AGCATCGCTTCAAGCAGGGA+GGG - Chr7:78128969-78128988 None:intergenic 55.0%
ATCGCCATAGTTGGCATGGG+TGG + Chr7:78128323-78128342 MsG0780040474.01.T01:intron 55.0%
ATTCCTCGAGGGATGTGAGG+TGG - Chr7:78131258-78131277 None:intergenic 55.0%
CCCGCCAAATTCCTCCAACT+TGG - Chr7:78131298-78131317 None:intergenic 55.0%
CCCTGACTTCCCTAGAGCTA+TGG + Chr7:78131195-78131214 MsG0780040474.01.T01:intron 55.0%
CCGGCATCTAGAGAGGTAGA+TGG - Chr7:78128215-78128234 None:intergenic 55.0%
GAGACCATGGCAGCTACTGT+TGG + Chr7:78127755-78127774 MsG0780040474.01.T01:intron 55.0%
GAGAGAACCTACACAGCAGC+AGG - Chr7:78126474-78126493 None:intergenic 55.0%
GCAGCAACAGCACCTTTCTG+AGG - Chr7:78126423-78126442 None:intergenic 55.0%
GCAGCAACGCTAAACCCCAT+TGG - Chr7:78131169-78131188 None:intergenic 55.0%
GGAGGAATTTGGCGGGAGAA+AGG + Chr7:78131302-78131321 MsG0780040474.01.T01:intron 55.0%
GGTGCACACAATCCGTCTCT+TGG - Chr7:78130886-78130905 None:intergenic 55.0%
TCCAAAGCTGCTTGATCCGG+AGG - Chr7:78131708-78131727 None:intergenic 55.0%
TCCTCCGGATCAAGCAGCTT+TGG + Chr7:78131704-78131723 MsG0780040474.01.T01:intron 55.0%
TCTGCTACCTGCTGCTGTGT+AGG + Chr7:78126464-78126483 MsG0780040474.01.T01:intron 55.0%
TGCGTATGGAAGGAGCCCTT+GGG - Chr7:78130419-78130438 None:intergenic 55.0%
TGGGCCAGCATGAAGCGAAA+GGG + Chr7:78129748-78129767 MsG0780040474.01.T01:intron 55.0%
TTTCCACCTCACATCCCTCG+AGG + Chr7:78131252-78131271 MsG0780040474.01.T01:intron 55.0%
! AAGCATCGCTTCAAGCAGGG+AGG - Chr7:78128970-78128989 None:intergenic 55.0%
! TCCCCGTAGTCTAGGACAGT+TGG - Chr7:78130326-78130345 None:intergenic 55.0%
!! AGCTCTAGGGAAGTCAGGGA+GGG - Chr7:78131194-78131213 None:intergenic 55.0%
!! GCTGAGGCAGCAAGCATTGA+TGG - Chr7:78126229-78126248 None:intergenic 55.0%
!! TAGCTCTAGGGAAGTCAGGG+AGG - Chr7:78131195-78131214 None:intergenic 55.0%
ACTGAAGCCCACTCATGCGG+TGG - Chr7:78130695-78130714 None:intergenic 60.0%
CAAGGGCTCCTTCCATACGC+AGG + Chr7:78130418-78130437 MsG0780040474.01.T01:intron 60.0%
CTGCGTATGGAAGGAGCCCT+TGG - Chr7:78130420-78130439 None:intergenic 60.0%
GTGGGCCAGCATGAAGCGAA+AGG + Chr7:78129747-78129766 MsG0780040474.01.T01:intron 60.0%
TCTAGGGAAGTCAGGGAGGG+AGG - Chr7:78131191-78131210 None:intergenic 60.0%
!! CGTCGACTCCTTCCCCAATG+GGG + Chr7:78131152-78131171 MsG0780040474.01.T01:intron 60.0%
!! GCGTCGACTCCTTCCCCAAT+GGG + Chr7:78131151-78131170 MsG0780040474.01.T01:intron 60.0%
!! GCTTTGAAGCGTTGGAGGCC+AGG + Chr7:78129844-78129863 MsG0780040474.01.T01:intron 60.0%
CTAGGCGGCATACCCCCTTC+AGG - Chr7:78131029-78131048 None:intergenic 65.0%
!! GGCGTCGACTCCTTCCCCAA+TGG + Chr7:78131150-78131169 MsG0780040474.01.T01:intron 65.0%
!! TCACTCGGGGGCTTGTTGCG+AGG + Chr7:78128846-78128865 MsG0780040474.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78126043 78131779 78126043 ID=MsG0780040474.01;Name=MsG0780040474.01
Chr7 mRNA 78126043 78131779 78126043 ID=MsG0780040474.01.T01;Parent=MsG0780040474.01;Name=MsG0780040474.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|0|0|3|0|78
Chr7 exon 78126043 78126107 78126043 ID=MsG0780040474.01.T01:exon:15570;Parent=MsG0780040474.01.T01
Chr7 exon 78131517 78131629 78131517 ID=MsG0780040474.01.T01:exon:15571;Parent=MsG0780040474.01.T01
Chr7 exon 78131721 78131779 78131721 ID=MsG0780040474.01.T01:exon:15572;Parent=MsG0780040474.01.T01
Chr7 CDS 78126043 78126107 78126043 ID=MsG0780040474.01.T01:cds;Parent=MsG0780040474.01.T01
Chr7 CDS 78131517 78131629 78131517 ID=MsG0780040474.01.T01:cds;Parent=MsG0780040474.01.T01
Chr7 CDS 78131721 78131779 78131721 ID=MsG0780040474.01.T01:cds;Parent=MsG0780040474.01.T01
Chr7 mRNA 78126043 78126336 78126043 ID=MsG0780040474.01.T02;Parent=MsG0780040474.01;Name=MsG0780040474.01.T02;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0|0|2|0|66
Chr7 exon 78126043 78126061 78126043 ID=MsG0780040474.01.T02:exon:15573;Parent=MsG0780040474.01.T02
Chr7 exon 78126155 78126336 78126155 ID=MsG0780040474.01.T02:exon:15574;Parent=MsG0780040474.01.T02
Chr7 CDS 78126043 78126061 78126043 ID=MsG0780040474.01.T02:cds;Parent=MsG0780040474.01.T02
Chr7 CDS 78126155 78126336 78126155 ID=MsG0780040474.01.T02:cds;Parent=MsG0780040474.01.T02
Gene Sequence

>MsG0780040474.01.T01

ATGGAGAAAACCATCCTAGGAAAGCTTGAATGGACTTTGACCGTGCCGACACCTTTTGTGTTCCTAATTTCATTCATTGAAGAAATCTGGACACCTGAGGTTAATGACTTTGTGTGCCTCTCAGATAGAGCTTACACTCATGACCAGATACTCATCATGGAGAAAACCACCCTAGGAACTTTGGAAATGATGGCTCGTTTTCTCTCTGAGTTGGGAATGATGCATTATGCTACGTAG

>MsG0780040474.01.T02

ATGGAGAAAACCATCCTAGGGGATTTCGAGATGATGGCTCATTTTCTCTCTGAGTTGGGAATGATGCATTATGCTACATTAAGGTATTGTCCATCAATGCTTGCTGCCTCAGCAGTTTATGCAGCAAGGAGCACATTGAGCAAGACTCCTGTTTGGAATGAGACACTCAAGATGCATACCGGTTACTCCGAAGAAAGTTGA
Protein sequence

>MsG0780040474.01.T01

MEKTILGKLEWTLTVPTPFVFLISFIEEIWTPEVNDFVCLSDRAYTHDQILIMEKTTLGTLEMMARFLSELGMMHYAT*

>MsG0780040474.01.T02

MEKTILGDFEMMAHFLSELGMMHYATLRYCPSMLAASAVYAARSTLSKTPVWNETLKMHTGYSEES*