AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035792.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035792.01.T01 MTR_6g088885 92.057 491 6 1 1 491 1 458 0.0 927
MsG0680035792.01.T01 MTR_8g102340 75.658 456 74 3 36 491 4 422 0.0 704
MsG0680035792.01.T01 MTR_3g065460 40.509 432 245 3 59 487 23 445 1.50e-119 360
MsG0680035792.01.T01 MTR_4g069940 40.460 435 252 4 58 487 27 459 9.99e-119 357
MsG0680035792.01.T01 MTR_5g085580 40.816 441 245 3 60 485 25 464 1.23e-118 357
MsG0680035792.01.T01 MTR_1g031900 40.749 454 253 5 42 491 8 449 9.63e-118 355
MsG0680035792.01.T01 MTR_1g031900 41.111 450 249 6 42 487 8 445 1.41e-116 352
MsG0680035792.01.T01 MTR_3g116510 39.597 447 267 2 42 487 10 454 2.34e-116 350
MsG0680035792.01.T01 MTR_1g056640 39.294 453 246 4 60 485 38 488 2.95e-116 351
MsG0680035792.01.T01 MTR_8g085720 39.401 434 252 3 57 487 23 448 4.27e-116 351
MsG0680035792.01.T01 MTR_4g132280 41.204 432 242 4 57 485 42 464 7.41e-116 351
MsG0680035792.01.T01 MTR_5g078200 40.741 432 244 4 59 487 22 444 1.05e-113 349
MsG0680035792.01.T01 MTR_3g083580 37.241 435 258 5 57 487 23 446 8.57e-112 340
MsG0680035792.01.T01 MTR_7g053500 40.783 434 248 8 61 487 27 458 2.58e-111 337
MsG0680035792.01.T01 MTR_5g078200 40.952 420 236 4 71 487 1 411 3.39e-110 339
MsG0680035792.01.T01 MTR_8g012400 39.815 432 252 7 61 487 30 458 8.09e-110 333
MsG0680035792.01.T01 MTR_1g022160 37.004 454 259 5 59 487 23 474 4.46e-109 332
MsG0680035792.01.T01 MTR_1g022160 36.324 457 264 5 59 490 23 477 5.81e-106 325
MsG0680035792.01.T01 MTR_1g022160 36.689 447 256 5 59 480 23 467 1.24e-104 321
MsG0680035792.01.T01 MTR_7g026340 39.862 434 243 11 60 485 23 446 6.43e-101 310
MsG0680035792.01.T01 MTR_4g088155 35.683 454 281 6 43 487 6 457 2.12e-99 307
MsG0680035792.01.T01 MTR_4g083500 38.170 448 251 11 60 487 44 485 1.03e-95 300
MsG0680035792.01.T01 MTR_7g053500 41.099 382 216 8 113 487 2 381 2.54e-95 294
MsG0680035792.01.T01 MTR_8g012400 39.737 380 221 7 113 487 2 378 2.62e-93 288
MsG0680035792.01.T01 MTR_3g080410 42.643 333 190 1 51 382 17 349 4.85e-93 287
MsG0680035792.01.T01 MTR_1g077990 45.483 321 172 3 60 379 31 349 2.11e-92 287
MsG0680035792.01.T01 MTR_2g086530 41.834 349 197 4 37 383 6 350 1.24e-91 284
MsG0680035792.01.T01 MTR_4g052970 43.519 324 181 2 61 383 30 352 1.65e-91 284
MsG0680035792.01.T01 MTR_4g084480 42.778 360 197 3 61 412 33 391 4.01e-91 283
MsG0680035792.01.T01 MTR_4g084480 42.382 361 199 3 61 420 33 385 5.89e-91 283
MsG0680035792.01.T01 MTR_4g010200 39.779 362 213 2 32 388 1 362 1.28e-90 282
MsG0680035792.01.T01 MTR_2g086530 42.424 330 186 2 55 383 3 329 2.07e-90 280
MsG0680035792.01.T01 MTR_4g084480 45.625 320 172 2 61 379 26 344 3.87e-90 280
MsG0680035792.01.T01 MTR_1g022160 41.509 318 184 2 59 374 23 340 2.89e-85 269
MsG0680035792.01.T01 MTR_1g007810 43.396 318 172 5 60 374 16 328 1.88e-83 262
MsG0680035792.01.T01 MTR_3g116510 39.752 322 192 1 166 487 1 320 3.59e-83 260
MsG0680035792.01.T01 MTR_4g114850 41.121 321 188 1 61 380 27 347 1.17e-82 260
MsG0680035792.01.T01 MTR_4g114850 41.121 321 188 1 61 380 27 347 1.31e-82 261
MsG0680035792.01.T01 MTR_2g019345 41.667 336 191 4 42 376 8 339 1.39e-82 261
MsG0680035792.01.T01 MTR_4g114850 41.121 321 188 1 61 380 27 347 1.70e-82 261
MsG0680035792.01.T01 MTR_4g076500 34.483 348 214 4 27 368 39 378 1.27e-74 240
MsG0680035792.01.T01 MTR_1g052430 38.907 311 182 4 60 369 32 335 1.90e-74 240
MsG0680035792.01.T01 MTR_2g034480 37.243 341 199 8 60 395 27 357 6.99e-72 232
MsG0680035792.01.T01 MTR_4g076255 37.304 319 187 6 60 378 25 330 1.73e-71 230
MsG0680035792.01.T01 MTR_2g034470 37.538 325 191 7 60 381 30 345 5.29e-71 230
MsG0680035792.01.T01 MTR_4g076570 37.299 311 187 4 60 369 22 325 1.52e-69 226
MsG0680035792.01.T01 MTR_7g081350 35.016 317 198 5 60 376 27 335 7.65e-69 224
MsG0680035792.01.T01 MTR_8g092070 32.727 440 268 14 60 487 34 457 2.11e-68 229
MsG0680035792.01.T01 MTR_2g034440 37.380 313 184 7 60 369 22 325 8.65e-68 221
MsG0680035792.01.T01 MTR_4g076470 35.737 319 192 6 60 378 23 328 2.15e-67 219
MsG0680035792.01.T01 MTR_2g034470 37.224 317 187 7 68 381 3 310 1.02e-66 218
MsG0680035792.01.T01 MTR_4g076490 34.675 323 199 5 58 380 95 405 1.31e-66 220
MsG0680035792.01.T01 MTR_4g076430 34.169 319 197 6 60 378 23 328 5.55e-64 211
MsG0680035792.01.T01 MTR_4g076440 34.483 319 196 6 60 378 23 328 5.73e-63 208
MsG0680035792.01.T01 MTR_1g010120 31.004 458 290 14 41 487 6 448 8.77e-63 212
MsG0680035792.01.T01 MTR_4g112025 31.947 457 281 17 42 485 15 454 2.65e-62 212
MsG0680035792.01.T01 MTR_3g108600 30.556 468 278 16 34 487 1 435 5.14e-61 207
MsG0680035792.01.T01 MTR_1g053320 30.396 454 291 14 43 485 15 454 1.03e-60 207
MsG0680035792.01.T01 MTR_3g031770 31.151 443 266 15 60 487 27 445 1.57e-59 204
MsG0680035792.01.T01 MTR_3g095050 30.137 438 280 16 60 487 34 455 8.83e-59 201
MsG0680035792.01.T01 MTR_2g027560 29.841 439 287 12 58 488 26 451 5.56e-57 197
MsG0680035792.01.T01 MTR_7g081370 31.230 317 197 5 60 376 28 323 1.02e-56 191
MsG0680035792.01.T01 MTR_7g085390 31.522 460 275 19 40 484 8 442 7.65e-56 194
MsG0680035792.01.T01 MTR_6g032820 29.892 465 275 16 27 471 4 437 1.60e-54 189
MsG0680035792.01.T01 MTR_5g081720 35.806 310 185 10 76 379 53 354 2.46e-51 179
MsG0680035792.01.T01 MTR_4g124440 29.691 421 266 16 73 481 41 443 4.03e-50 179
MsG0680035792.01.T01 MTR_4g134280 31.988 347 220 10 147 488 2 337 3.55e-47 167
MsG0680035792.01.T01 MTR_8g089400 56.383 94 40 1 398 491 33 125 1.44e-33 124
MsG0680035792.01.T01 MTR_8g089400 56.383 94 40 1 398 491 53 145 2.98e-33 124
MsG0680035792.01.T01 MTR_1g116870 48.276 87 43 1 402 488 276 360 1.32e-22 99.4
MsG0680035792.01.T01 MTR_3g048280 45.192 104 55 2 384 487 94 195 1.91e-22 95.5
MsG0680035792.01.T01 MTR_5g097420 46.512 86 45 1 402 487 30 114 2.67e-22 92.4
MsG0680035792.01.T01 MTR_8g085440 48.837 86 42 1 402 487 32 115 4.39e-21 89.0
MsG0680035792.01.T01 MTR_5g091650 44.681 94 50 2 397 490 103 194 1.92e-20 89.7
MsG0680035792.01.T01 MTR_5g091650 44.681 94 50 2 397 490 103 194 5.99e-20 90.1
MsG0680035792.01.T01 MTR_8g085420 48.148 81 40 1 402 482 32 110 6.86e-19 83.6
MsG0680035792.01.T01 MTR_8g085390 42.529 87 48 1 401 487 29 113 1.03e-18 84.3
MsG0680035792.01.T01 MTR_5g015720 42.045 88 49 2 402 488 329 415 5.50e-17 83.6
MsG0680035792.01.T01 MTR_4g079530 40.698 86 50 1 402 487 37 121 8.25e-17 77.0
MsG0680035792.01.T01 MTR_4g079530 40.698 86 50 1 402 487 37 121 1.18e-16 78.2
MsG0680035792.01.T01 MTR_2g049670 41.111 90 50 2 401 490 157 243 1.43e-16 81.3
MsG0680035792.01.T01 MTR_1g084820 40.217 92 52 2 390 481 408 496 1.65e-16 82.8
MsG0680035792.01.T01 MTR_1g084820 40.217 92 52 2 390 481 408 496 1.89e-16 82.8
MsG0680035792.01.T01 MTR_2g072500 40.659 91 50 2 398 487 3 90 2.83e-16 74.3
MsG0680035792.01.T01 MTR_4g133730 37.931 87 53 1 401 487 27 112 3.46e-16 75.1
MsG0680035792.01.T01 MTR_4g036775 34.167 120 74 2 250 369 54 168 3.50e-16 78.2
MsG0680035792.01.T01 MTR_3g082080 42.500 80 44 1 402 481 157 234 4.29e-16 78.2
MsG0680035792.01.T01 MTR_7g111600 40.698 86 49 2 402 487 160 243 7.88e-16 77.8
MsG0680035792.01.T01 MTR_7g111600 40.698 86 49 2 402 487 160 243 9.03e-16 78.6
MsG0680035792.01.T01 MTR_7g111600 37.615 109 66 2 379 487 137 243 1.26e-15 78.2
MsG0680035792.01.T01 MTR_4g036680 34.167 120 74 2 250 369 54 168 1.27e-15 76.3
MsG0680035792.01.T01 MTR_4g133735 40.000 85 50 1 401 485 27 110 6.61e-15 71.2
MsG0680035792.01.T01 MTR_4g109490 38.372 86 50 2 402 487 24 106 9.63e-15 73.9
MsG0680035792.01.T01 MTR_8g085400 42.683 82 42 2 402 483 33 109 1.24e-14 70.5
MsG0680035792.01.T01 MTR_8g088120 41.975 81 45 2 410 490 56 134 4.56e-14 72.0
MsG0680035792.01.T01 MTR_5g044530 38.824 85 50 1 397 481 17 99 2.62e-13 70.5
MsG0680035792.01.T01 MTR_4g083070 36.782 87 52 2 402 487 21 105 4.60e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035792.01.T01 AT5G56590 71.655 441 121 4 53 491 19 457 0.0 668
MsG0680035792.01.T01 AT4G29360 65.817 471 136 5 42 488 7 476 0.0 629
MsG0680035792.01.T01 AT4G29360 64.865 481 144 5 32 488 7 486 0.0 629
MsG0680035792.01.T01 AT4G26830 41.667 444 256 3 43 485 8 449 4.50e-126 375
MsG0680035792.01.T01 AT2G01630 42.956 433 235 3 58 487 21 444 3.18e-125 374
MsG0680035792.01.T01 AT4G26830 42.523 428 243 3 59 485 28 453 5.32e-125 372
MsG0680035792.01.T01 AT2G01630 43.560 427 229 4 58 481 21 438 2.24e-124 370
MsG0680035792.01.T01 AT5G55180 41.860 430 246 4 59 485 26 454 7.67e-123 367
MsG0680035792.01.T01 AT4G34480 41.410 454 258 3 35 487 1 447 4.69e-122 367
MsG0680035792.01.T01 AT5G55180 41.784 426 244 4 59 481 26 450 1.20e-120 362
MsG0680035792.01.T01 AT3G13560 40.183 438 247 4 54 487 20 446 6.33e-119 358
MsG0680035792.01.T01 AT3G13560 40.183 438 247 4 54 487 20 446 6.33e-119 358
MsG0680035792.01.T01 AT3G13560 40.183 438 247 4 54 487 20 446 6.33e-119 358
MsG0680035792.01.T01 AT3G13560 40.183 438 247 4 54 487 20 446 6.33e-119 358
MsG0680035792.01.T01 AT3G13560 40.183 438 247 4 54 487 20 446 6.33e-119 358
MsG0680035792.01.T01 AT1G66250 42.141 439 241 4 52 487 24 452 7.86e-119 358
MsG0680035792.01.T01 AT2G16230 39.770 435 257 3 58 491 23 453 1.98e-118 357
MsG0680035792.01.T01 AT2G05790 40.181 443 247 5 60 485 25 466 3.19e-118 355
MsG0680035792.01.T01 AT1G11820 41.204 432 242 4 59 487 43 465 1.05e-114 348
MsG0680035792.01.T01 AT1G11820 41.315 426 238 4 59 481 43 459 1.74e-112 341
MsG0680035792.01.T01 AT2G01630 44.000 375 198 4 58 429 21 386 2.26e-103 315
MsG0680035792.01.T01 AT3G07320 38.372 430 258 6 61 485 26 453 4.15e-103 316
MsG0680035792.01.T01 AT5G24318 37.385 436 255 8 60 487 30 455 5.48e-101 311
MsG0680035792.01.T01 AT4G14080 36.902 439 265 7 57 487 39 473 4.67e-100 309
MsG0680035792.01.T01 AT3G23770 37.955 440 262 6 57 487 34 471 8.22e-100 308
MsG0680035792.01.T01 AT5G24318 36.721 433 256 8 60 484 30 452 1.06e-97 302
MsG0680035792.01.T01 AT5G42720 44.412 340 187 2 42 379 8 347 6.42e-97 300
MsG0680035792.01.T01 AT2G27500 43.768 345 192 2 57 400 26 369 5.88e-96 295
MsG0680035792.01.T01 AT2G27500 44.248 339 187 2 57 394 26 363 1.38e-95 295
MsG0680035792.01.T01 AT1G32860 43.768 345 190 3 37 378 6 349 1.51e-95 296
MsG0680035792.01.T01 AT4G18340 44.606 343 186 3 60 401 34 373 1.13e-94 292
MsG0680035792.01.T01 AT4G18340 44.606 343 186 3 60 401 34 373 1.69e-94 292
MsG0680035792.01.T01 AT1G30080 43.236 377 188 5 1 376 1 352 4.98e-94 290
MsG0680035792.01.T01 AT3G55430 37.385 436 254 14 58 487 27 449 1.39e-93 291
MsG0680035792.01.T01 AT1G30080 43.236 377 188 5 1 376 1 352 1.92e-93 290
MsG0680035792.01.T01 AT4G34480 42.566 343 196 1 35 376 1 343 1.02e-90 281
MsG0680035792.01.T01 AT4G34480 42.815 341 187 3 148 487 3 336 2.69e-90 281
MsG0680035792.01.T01 AT2G26600 43.558 326 180 2 57 378 28 353 1.97e-89 279
MsG0680035792.01.T01 AT3G15800 42.857 322 182 2 61 380 44 365 1.47e-86 271
MsG0680035792.01.T01 AT1G11820 42.202 327 186 1 59 382 43 369 6.46e-86 270
MsG0680035792.01.T01 AT2G39640 35.116 430 260 9 58 485 28 440 1.07e-81 264
MsG0680035792.01.T01 AT2G39640 31.148 122 70 2 377 486 423 542 4.23e-14 75.1
MsG0680035792.01.T01 AT3G61810 42.025 326 175 4 60 379 55 372 1.39e-81 258
MsG0680035792.01.T01 AT5G42100 41.796 323 183 4 58 376 25 346 5.78e-81 258
MsG0680035792.01.T01 AT5G42100 41.796 323 183 4 58 376 25 346 6.24e-81 258
MsG0680035792.01.T01 AT2G27500 44.755 286 156 2 110 394 1 285 1.05e-80 254
MsG0680035792.01.T01 AT5G24318 38.261 345 205 5 35 376 5 344 1.79e-80 255
MsG0680035792.01.T01 AT4G16260 38.235 340 200 6 41 379 5 335 1.73e-77 246
MsG0680035792.01.T01 AT5G24318 38.344 326 186 5 169 488 1 317 6.65e-74 236
MsG0680035792.01.T01 AT3G57270 37.346 324 193 6 57 378 24 339 9.67e-74 236
MsG0680035792.01.T01 AT4G16260 38.978 313 181 6 68 379 3 306 1.48e-71 230
MsG0680035792.01.T01 AT3G57240 37.195 328 192 8 51 378 27 340 1.46e-69 226
MsG0680035792.01.T01 AT3G57260 35.737 319 193 6 60 378 32 338 2.40e-69 225
MsG0680035792.01.T01 AT3G57260 35.737 319 193 6 60 378 48 354 5.29e-69 224
MsG0680035792.01.T01 AT2G26600 43.191 257 142 2 126 378 3 259 3.66e-68 221
MsG0680035792.01.T01 AT3G46570 39.474 342 191 11 42 376 10 342 9.53e-68 221
MsG0680035792.01.T01 AT5G20390 35.574 357 213 11 23 376 1 343 1.09e-64 213
MsG0680035792.01.T01 AT5G20340 35.737 319 195 7 60 376 43 353 4.99e-62 206
MsG0680035792.01.T01 AT5G58090 31.306 444 281 13 54 487 16 445 7.33e-61 207
MsG0680035792.01.T01 AT5G18220 31.306 444 271 15 58 485 28 453 5.96e-60 205
MsG0680035792.01.T01 AT1G77780 34.648 355 217 7 58 412 22 361 8.57e-60 201
MsG0680035792.01.T01 AT5G20330 34.302 344 210 8 41 376 9 344 1.38e-59 200
MsG0680035792.01.T01 AT4G31140 30.137 438 280 13 60 487 27 448 3.80e-59 202
MsG0680035792.01.T01 AT3G24330 31.448 442 273 15 58 485 37 462 4.28e-59 203
MsG0680035792.01.T01 AT1G33220 35.354 297 184 5 60 355 34 323 9.60e-59 197
MsG0680035792.01.T01 AT3G04010 31.674 442 271 15 58 485 31 455 1.84e-57 198
MsG0680035792.01.T01 AT4G17180 31.390 446 264 16 58 488 23 441 6.55e-56 194
MsG0680035792.01.T01 AT5G58480 30.046 436 280 11 60 487 26 444 1.78e-55 192
MsG0680035792.01.T01 AT1G77790 34.161 322 203 6 57 376 27 341 1.99e-55 189
MsG0680035792.01.T01 AT5G64790 29.412 442 285 14 57 487 26 451 1.97e-54 190
MsG0680035792.01.T01 AT2G19440 30.682 440 273 15 60 485 21 442 2.47e-52 184
MsG0680035792.01.T01 AT2G19440 30.682 440 273 15 60 485 21 442 2.47e-52 184
MsG0680035792.01.T01 AT3G55780 34.177 316 198 7 74 384 49 359 8.13e-52 180
MsG0680035792.01.T01 AT5G20870 30.248 443 273 15 64 487 34 459 1.14e-51 183
MsG0680035792.01.T01 AT1G64760 30.000 440 276 16 60 485 25 446 1.16e-49 177
MsG0680035792.01.T01 AT1G64760 30.000 440 276 16 60 485 25 446 1.16e-49 177
MsG0680035792.01.T01 AT5G20560 32.333 300 196 5 57 355 31 324 8.72e-47 166
MsG0680035792.01.T01 AT4G05430 52.222 90 42 1 398 487 19 107 3.75e-28 109
MsG0680035792.01.T01 AT5G67460 27.027 370 206 11 127 488 65 378 3.87e-28 115
MsG0680035792.01.T01 AT4G05430 52.222 90 42 1 398 487 44 132 5.69e-28 109
MsG0680035792.01.T01 AT4G05430 53.012 83 38 1 399 481 45 126 2.45e-26 103
MsG0680035792.01.T01 AT5G67460 27.072 362 200 11 128 481 66 371 2.14e-25 107
MsG0680035792.01.T01 AT1G66870 38.525 122 63 2 366 487 1 110 1.27e-24 98.6
MsG0680035792.01.T01 AT1G66870 47.674 86 44 1 402 487 53 137 2.42e-24 99.0
MsG0680035792.01.T01 AT4G16165 36.066 122 66 2 366 487 1 110 9.81e-23 93.6
MsG0680035792.01.T01 AT1G66852 45.349 86 45 2 402 487 26 109 6.55e-22 91.3
MsG0680035792.01.T01 AT5G63225 50.575 87 41 1 401 487 24 108 1.25e-21 90.1
MsG0680035792.01.T01 AT1G66855 44.186 86 47 1 402 487 26 110 1.89e-21 89.7
MsG0680035792.01.T01 AT4G09462 48.837 86 42 1 402 487 29 112 2.69e-21 89.4
MsG0680035792.01.T01 AT4G09090 44.944 89 47 1 400 488 29 115 6.00e-21 88.6
MsG0680035792.01.T01 AT4G09465 47.674 86 43 1 402 487 31 114 6.43e-21 88.6
MsG0680035792.01.T01 AT4G09467 47.674 86 43 1 402 487 31 114 7.90e-21 88.2
MsG0680035792.01.T01 AT4G09464 47.674 86 43 1 402 487 31 114 7.90e-21 88.2
MsG0680035792.01.T01 AT5G63240 41.414 99 57 1 391 488 29 127 1.86e-20 87.8
MsG0680035792.01.T01 AT1G79480 43.023 86 47 1 402 487 311 394 4.01e-20 92.8
MsG0680035792.01.T01 AT1G79480 43.023 86 47 1 402 487 310 393 4.20e-20 92.8
MsG0680035792.01.T01 AT5G63250 41.414 99 57 1 391 488 31 129 4.87e-20 86.7
MsG0680035792.01.T01 AT4G09466 45.349 86 45 1 402 487 31 114 2.31e-19 84.0
MsG0680035792.01.T01 AT4G13600 41.860 86 48 1 402 487 61 144 2.49e-18 84.7
MsG0680035792.01.T01 AT1G29380 45.977 87 45 2 401 487 147 231 2.80e-18 86.3
MsG0680035792.01.T01 AT1G09460 45.161 93 46 3 399 491 134 221 2.85e-18 86.3
MsG0680035792.01.T01 AT5G35740 40.426 94 54 2 395 487 23 115 3.91e-18 80.9
MsG0680035792.01.T01 AT1G29380 45.977 87 45 2 401 487 147 231 4.20e-18 84.7
MsG0680035792.01.T01 AT2G04910 40.230 87 51 1 401 487 14 99 5.57e-18 79.7
MsG0680035792.01.T01 AT1G29380 48.148 81 40 2 401 481 147 225 1.70e-17 82.0
MsG0680035792.01.T01 AT1G29380 48.148 81 40 2 401 481 147 225 1.70e-17 82.0
MsG0680035792.01.T01 AT2G30933 40.000 90 52 2 401 490 81 168 1.79e-17 82.0
MsG0680035792.01.T01 AT3G58100 43.023 86 48 1 402 487 41 125 2.98e-17 80.1
MsG0680035792.01.T01 AT2G29735 39.785 93 52 2 397 487 26 116 3.60e-17 77.8
MsG0680035792.01.T01 AT1G78520 35.294 102 63 1 386 487 16 114 3.87e-17 77.8
MsG0680035792.01.T01 AT3G58100 43.023 86 48 1 402 487 117 201 6.47e-17 80.9
MsG0680035792.01.T01 AT5G53600 40.698 86 48 1 402 487 29 111 8.69e-17 76.6
MsG0680035792.01.T01 AT5G63230 41.379 87 49 1 401 487 25 109 1.74e-16 75.9
MsG0680035792.01.T01 AT2G30933 42.500 80 44 2 402 481 82 159 2.54e-16 76.6
MsG0680035792.01.T01 AT2G30933 42.500 80 44 2 402 481 82 159 2.54e-16 76.6
MsG0680035792.01.T01 AT5G53610 44.048 84 44 1 402 485 28 108 2.60e-16 75.1
MsG0680035792.01.T01 AT5G61130 38.372 86 51 1 402 487 21 104 3.30e-16 77.8
MsG0680035792.01.T01 AT2G04910 40.741 81 47 1 401 481 14 93 4.93e-16 75.1
MsG0680035792.01.T01 AT1G18650 37.500 96 57 2 392 487 12 104 6.10e-16 76.3
MsG0680035792.01.T01 AT2G43670 36.842 95 57 1 393 487 26 117 8.84e-16 73.9
MsG0680035792.01.T01 AT1G18650 38.298 94 55 2 392 485 12 102 9.41e-16 74.3
MsG0680035792.01.T01 AT5G08000 35.955 89 55 1 399 487 37 123 2.12e-13 69.7
MsG0680035792.01.T01 AT5G08000 36.047 86 53 1 402 487 21 104 1.46e-12 67.0
MsG0680035792.01.T01 AT1G26450 39.706 68 39 1 408 475 26 91 5.31e-11 62.4

Find 109 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCTATTTGATCTTTA+TGG 0.015322 6:+112328067 MsG0680035792.01.T01:CDS
ACTTACAGAATGCGATAAAT+TGG 0.156679 6:+112329221 MsG0680035792.01.T01:CDS
TCTGATGTTGCTTGTAGTTT+TGG 0.219401 6:+112329370 MsG0680035792.01.T01:CDS
TTTCGCTGTTCAACGAAAAT+AGG 0.254836 6:+112329020 MsG0680035792.01.T01:CDS
AATTGGGCTTGTGGTACTTC+TGG 0.267372 6:+112329238 MsG0680035792.01.T01:CDS
GTTTGGAATCTGAGAGGAAT+TGG 0.304339 6:+112329050 MsG0680035792.01.T01:CDS
TTATATGTTTGTGCATTATC+AGG 0.317579 6:-112328920 None:intergenic
TGTTCTTGTTCTTGCTTGCT+TGG 0.317901 6:-112326708 None:intergenic
AATAGCTATTACCAGCAAAA+TGG 0.320368 6:+112329343 MsG0680035792.01.T01:CDS
CGAAAATAGGAAGCCGGGTT+TGG 0.322982 6:+112329033 MsG0680035792.01.T01:CDS
GGATATAGATCGATCATAAA+AGG 0.329265 6:-112328665 None:intergenic
GAGTCACGGTATGCGTAATA+AGG 0.361223 6:-112328686 None:intergenic
GCCAAGTGTCGGCGTTAGTT+TGG 0.366716 6:-112328355 None:intergenic
ACCAACTGTGACACCTTATC+AGG 0.370353 6:-112328203 None:intergenic
AATGGAAGCAAATCTAGATT+TGG 0.371343 6:-112328323 None:intergenic
CTAGGCTGTACACGTTTGTT+AGG 0.371470 6:-112329090 None:intergenic
CAACTTCAAATGGAACAAAA+TGG 0.373327 6:+112329167 MsG0680035792.01.T01:CDS
AACTGCATCTACATGAAAAC+CGG 0.376862 6:+112329638 MsG0680035792.01.T01:CDS
GTATAAAGCAAACCAGTGTT+AGG 0.380170 6:-112328767 None:intergenic
CTCTCCAACCAAAGTGTCCT+TGG 0.385377 6:+112328706 MsG0680035792.01.T01:CDS
TTTGGAATCTGAGAGGAATT+GGG 0.401173 6:+112329051 MsG0680035792.01.T01:CDS
CTTACAGAATGCGATAAATT+GGG 0.401528 6:+112329222 MsG0680035792.01.T01:CDS
CCCCGGCTTTGCAGGTGTAC+CGG 0.405531 6:-112328975 None:intergenic
CATGTAGATGCAGTTGTCAT+AGG 0.410440 6:-112329630 None:intergenic
TTCAGGACTTTCTGTAACTT+CGG 0.416209 6:-112328438 None:intergenic
GCTACTAGTTCAACTTCAAA+TGG 0.417514 6:+112329157 MsG0680035792.01.T01:CDS
GCATCTGCGGTCATGTCAAC+AGG 0.422571 6:-112329130 None:intergenic
ATCTTAGTGGCTGGATAGTA+AGG 0.422818 6:-112328395 None:intergenic
GAAACTCCAACAGTGGCTTC+AGG 0.425028 6:-112328625 None:intergenic
GGAGTAGCAGCTGTCTCCTT+AGG 0.430476 6:-112328899 None:intergenic
AACCGGTACACCTGCAAAGC+CGG 0.434168 6:+112328973 MsG0680035792.01.T01:CDS
GACTGGTGTCCTTGTTGATA+AGG 0.437363 6:+112329396 MsG0680035792.01.T01:CDS
GATAACATGTCTTATCAGAT+TGG 0.437839 6:-112328945 None:intergenic
AAACTCCCGTAGCAACAATC+TGG 0.440807 6:-112328137 None:intergenic
GCATGCGAGACGAAGTTATC+CGG 0.454095 6:-112329307 None:intergenic
CTGTACACGTTTGTTAGGTC+CGG 0.458800 6:-112329085 None:intergenic
ACCGGTACACCTGCAAAGCC+GGG 0.466058 6:+112328974 MsG0680035792.01.T01:CDS
CGATCGTTCCCTCCTTCCGC+TGG 0.473345 6:+112328575 MsG0680035792.01.T01:CDS
AAAGTCATGGTAACCGAGAC+AGG 0.476137 6:+112328857 MsG0680035792.01.T01:CDS
TTATTTCCAGATTGTTGCTA+CGG 0.485694 6:+112328131 MsG0680035792.01.T01:CDS
TGCATAGTCCAAGGACACTT+TGG 0.486002 6:-112328714 None:intergenic
ACCGGCGTCGAACTTATGAT+TGG 0.486069 6:+112328296 MsG0680035792.01.T01:CDS
TGACCTGCCTCCACCTGATA+AGG 0.493506 6:+112328190 MsG0680035792.01.T01:CDS
GAATTGGGGAATAGTTTATC+CGG 0.496894 6:+112329066 MsG0680035792.01.T01:CDS
TCTCTAGATTCTCACTGCTC+TGG 0.498006 6:-112326741 None:intergenic
AGACATGTTATCAATGAAAC+CGG 0.498567 6:+112328956 MsG0680035792.01.T01:CDS
GACCTCGTCCAGTAAAATCT+AGG 0.500092 6:-112329108 None:intergenic
TTGGAATCTGAGAGGAATTG+GGG 0.500877 6:+112329052 MsG0680035792.01.T01:CDS
GTTTCCAGTACTCATTCCCT+TGG 0.501668 6:+112328542 MsG0680035792.01.T01:CDS
TTCAACGAAAATAGGAAGCC+GGG 0.503312 6:+112329028 MsG0680035792.01.T01:CDS
TTCCTCTCAGATTCCAAACC+CGG 0.505442 6:-112329046 None:intergenic
TTTCGAAGGCCAACCTGTCT+CGG 0.507082 6:-112328870 None:intergenic
TATTTCCAGATTGTTGCTAC+GGG 0.509756 6:+112328132 MsG0680035792.01.T01:CDS
TTTCAGAACGATTAAAGTCA+TGG 0.511255 6:+112328844 MsG0680035792.01.T01:CDS
AACGCCAAGGGAATGAGTAC+TGG 0.512224 6:-112328546 None:intergenic
TTAGTTTGGAACTGAGAGAA+TGG 0.514546 6:-112328341 None:intergenic
TCCAAACTAACGCCGACACT+TGG 0.516045 6:+112328354 MsG0680035792.01.T01:CDS
GGCTCAAAACAAGGCTGGCT+AGG 0.534132 6:-112329286 None:intergenic
TCATTTCCTGAAGCCACTGT+TGG 0.538772 6:+112328619 MsG0680035792.01.T01:CDS
TAGTCCAAGGACACTTTGGT+TGG 0.543887 6:-112328710 None:intergenic
ACACCTTATCAGGTGGAGGC+AGG 0.545767 6:-112328193 None:intergenic
GCAAGGACATTAGTCATGGC+TGG 0.545995 6:-112328482 None:intergenic
CGATCGAGACAGAACGCCAA+GGG 0.547405 6:-112328558 None:intergenic
GTTCAACGAAAATAGGAAGC+CGG 0.548569 6:+112329027 MsG0680035792.01.T01:CDS
TATCCGGCTCAAAACAAGGC+TGG 0.556154 6:-112329291 None:intergenic
GAAGTTATTGATCCTAACAC+TGG 0.557705 6:+112328755 MsG0680035792.01.T01:CDS
AAGTTATCCGGCTCAAAACA+AGG 0.561099 6:-112329295 None:intergenic
TAAAAGCACCAGCGGAAGGA+GGG 0.563613 6:-112328583 None:intergenic
CGGCTTTCTTGAGTGCTGCA+AGG 0.564241 6:-112328499 None:intergenic
GCCTTCGAAAGGTTCACCTA+AGG 0.564951 6:+112328883 MsG0680035792.01.T01:CDS
AAGATCACATACATAACTGT+TGG 0.567480 6:+112328413 MsG0680035792.01.T01:CDS
TCCGCGAGAAACTCCAACAG+TGG 0.570537 6:-112328632 None:intergenic
TTGTGGTACTTCTGGAAATG+TGG 0.570623 6:+112329246 MsG0680035792.01.T01:CDS
CTTGCAGCACTCAAGAAAGC+CGG 0.577987 6:+112328500 MsG0680035792.01.T01:CDS
TTAAAAGCACCAGCGGAAGG+AGG 0.580396 6:-112328584 None:intergenic
TAAACGTCTAGCTCTTCCCC+CGG 0.583186 6:-112328992 None:intergenic
AGGATCAATAACTTCGGAGG+AGG 0.583202 6:-112328747 None:intergenic
TCCTTAGGTGAACCTTTCGA+AGG 0.584583 6:-112328884 None:intergenic
TTTCAAGGACTGAACTTACC+CGG 0.587178 6:-112329657 None:intergenic
GAGACAGGTTGGCCTTCGAA+AGG 0.589766 6:+112328872 MsG0680035792.01.T01:CDS
CTATTAAAAGCACCAGCGGA+AGG 0.591719 6:-112328587 None:intergenic
CCGGTACACCTGCAAAGCCG+GGG 0.591828 6:+112328975 MsG0680035792.01.T01:CDS
TAGTGGCTGGATAGTAAGGA+AGG 0.592250 6:-112328391 None:intergenic
ACCTGATAAGGTGTCACAGT+TGG 0.594346 6:+112328202 MsG0680035792.01.T01:CDS
TAGAGAGAACAATGGCAAGA+GGG 0.597917 6:+112326764 MsG0680035792.01.T01:exon
AACTGTGACACCTTATCAGG+TGG 0.598360 6:-112328200 None:intergenic
GCCACTGTTGGAGTTTCTCG+CGG 0.601749 6:+112328631 MsG0680035792.01.T01:CDS
ATGTATGTGATCTTAGTGGC+TGG 0.602804 6:-112328404 None:intergenic
ATAGAGAGAACAATGGCAAG+AGG 0.613986 6:+112326763 MsG0680035792.01.T01:exon
AGTTATGTATGTGATCTTAG+TGG 0.615030 6:-112328408 None:intergenic
ACACTTTGGTTGGAGAGTCA+CGG 0.616571 6:-112328700 None:intergenic
ACTAGTAGCATTTGCATCTG+CGG 0.616757 6:-112329143 None:intergenic
TGTGACACCTTATCAGGTGG+AGG 0.617208 6:-112328197 None:intergenic
TCATGGTAACCGAGACAGGT+TGG 0.619747 6:+112328861 MsG0680035792.01.T01:CDS
CTCGAACAATGCATAGTCCA+AGG 0.625466 6:-112328723 None:intergenic
ACGATCGAGACAGAACGCCA+AGG 0.632161 6:-112328559 None:intergenic
ACTATTTCTCAGCCAAGTGT+CGG 0.633481 6:-112328366 None:intergenic
AGTGTTAGGATCAATAACTT+CGG 0.634976 6:-112328753 None:intergenic
AATGCGATAAATTGGGCTTG+TGG 0.638491 6:+112329229 MsG0680035792.01.T01:CDS
TCTAGAGATAGAGAGAACAA+TGG 0.645847 6:+112326756 MsG0680035792.01.T01:exon
ACTGCATCTACATGAAAACC+GGG 0.646494 6:+112329639 MsG0680035792.01.T01:CDS
TCCAATCATAAGTTCGACGC+CGG 0.648715 6:-112328297 None:intergenic
GTTAGGATCAATAACTTCGG+AGG 0.650725 6:-112328750 None:intergenic
CAGATAAAGACATAAAGTAA+CGG 0.651037 6:-112326683 None:intergenic
CGGTACACCTGCAAAGCCGG+GGG 0.653266 6:+112328976 MsG0680035792.01.T01:CDS
CTTGCTATTAAAAGCACCAG+CGG 0.664710 6:-112328591 None:intergenic
TGCTGCAAGGACATTAGTCA+TGG 0.668003 6:-112328486 None:intergenic
TACTTGGATCCTTATCAACA+AGG 0.678577 6:-112329405 None:intergenic
AGCCGGGTTTGGAATCTGAG+AGG 0.695818 6:+112329044 MsG0680035792.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAGTTATTTATGTT+TGG + Chr6:112327495-112327514 MsG0680035792.01.T01:intron 10.0%
!! ATAATTCATTGTAATTATAT+GGG - Chr6:112327354-112327373 None:intergenic 10.0%
!!! AAAAGAAAAAACTATATTTT+TGG + Chr6:112327717-112327736 MsG0680035792.01.T01:intron 10.0%
!! AAAGAAAATTAATTAAGTGA+TGG - Chr6:112329441-112329460 None:intergenic 15.0%
!! AAGAAAATTAATTAAGTGAT+GGG - Chr6:112329440-112329459 None:intergenic 15.0%
!! CATAATTCATTGTAATTATA+TGG - Chr6:112327355-112327374 None:intergenic 15.0%
!!! TTTTAGGTTTAATATGTTTA+TGG + Chr6:112329514-112329533 MsG0680035792.01.T01:intron 15.0%
!! TATACGAAAAAACAGAAAAA+GGG - Chr6:112329465-112329484 None:intergenic 20.0%
!! TTTCTTCTATTTGATCTTTA+TGG + Chr6:112328067-112328086 MsG0680035792.01.T01:CDS 20.0%
!!! AGATTTTCTCAAATTATTAG+CGG + Chr6:112327375-112327394 MsG0680035792.01.T01:intron 20.0%
!!! TTTTAGTTAATCATGCTAAA+TGG - Chr6:112327770-112327789 None:intergenic 20.0%
! AAATCATCTACACATATTAC+AGG - Chr6:112329542-112329561 None:intergenic 25.0%
! AAATGGAACAAAAGTAGTTT+AGG - Chr6:112327753-112327772 None:intergenic 25.0%
! AATCATCTACACATATTACA+GGG - Chr6:112329541-112329560 None:intergenic 25.0%
! ATAATCAGTTTCATTTCATG+TGG + Chr6:112327179-112327198 MsG0680035792.01.T01:intron 25.0%
! CAGATAAAGACATAAAGTAA+CGG - Chr6:112326686-112326705 None:intergenic 25.0%
! GTATACGAAAAAACAGAAAA+AGG - Chr6:112329466-112329485 None:intergenic 25.0%
! TAGACATTAATCTCATTAAG+TGG + Chr6:112327151-112327170 MsG0680035792.01.T01:intron 25.0%
! TATTCAAAATCTATGAAGCA+CGG - Chr6:112327436-112327455 None:intergenic 25.0%
! TTATATGTTTGTGCATTATC+AGG - Chr6:112328923-112328942 None:intergenic 25.0%
! TTCATTGTAATTATATGGGT+CGG - Chr6:112327350-112327369 None:intergenic 25.0%
! TTTATGGAAAACATGAGAAA+TGG + Chr6:112327064-112327083 MsG0680035792.01.T01:intron 25.0%
!! AAAACAAAGCTTTGTAACAT+CGG + Chr6:112327786-112327805 MsG0680035792.01.T01:intron 25.0%
!! ATTTCTCATGTTTTCCATAA+AGG - Chr6:112327065-112327084 None:intergenic 25.0%
!! TTTCTCATGTTTTCCATAAA+GGG - Chr6:112327064-112327083 None:intergenic 25.0%
!! TTTTATCTTCTTATGAAGTC+CGG - Chr6:112328522-112328541 None:intergenic 25.0%
!!! TGCAATTTATTTTGCGTTAA+CGG + Chr6:112328814-112328833 MsG0680035792.01.T01:CDS 25.0%
AAATGGAAGACTTCTAAGTT+TGG + Chr6:112327081-112327100 MsG0680035792.01.T01:intron 30.0%
AAGATCACATACATAACTGT+TGG + Chr6:112328413-112328432 MsG0680035792.01.T01:CDS 30.0%
AATAGCTATTACCAGCAAAA+TGG + Chr6:112329343-112329362 MsG0680035792.01.T01:CDS 30.0%
AATGGAAGCAAATCTAGATT+TGG - Chr6:112328326-112328345 None:intergenic 30.0%
ACTTACAGAATGCGATAAAT+TGG + Chr6:112329221-112329240 MsG0680035792.01.T01:CDS 30.0%
AGACATGTTATCAATGAAAC+CGG + Chr6:112328956-112328975 MsG0680035792.01.T01:CDS 30.0%
AGTGTTAGGATCAATAACTT+CGG - Chr6:112328756-112328775 None:intergenic 30.0%
AGTTATGTATGTGATCTTAG+TGG - Chr6:112328411-112328430 None:intergenic 30.0%
CAACTTCAAATGGAACAAAA+TGG + Chr6:112329167-112329186 MsG0680035792.01.T01:CDS 30.0%
CTTACAGAATGCGATAAATT+GGG + Chr6:112329222-112329241 MsG0680035792.01.T01:CDS 30.0%
GATAACATGTCTTATCAGAT+TGG - Chr6:112328948-112328967 None:intergenic 30.0%
GGATATAGATCGATCATAAA+AGG - Chr6:112328668-112328687 None:intergenic 30.0%
TAACTCACATTTGAGAGATT+TGG + Chr6:112327679-112327698 MsG0680035792.01.T01:intron 30.0%
TTATTTCCAGATTGTTGCTA+CGG + Chr6:112328131-112328150 MsG0680035792.01.T01:CDS 30.0%
TTTCAGAACGATTAAAGTCA+TGG + Chr6:112328844-112328863 MsG0680035792.01.T01:CDS 30.0%
! AACATCGGTTAAGAATTTGT+TGG + Chr6:112327801-112327820 MsG0680035792.01.T01:intron 30.0%
! ACTAATGCAGAAATGTTTTC+AGG - Chr6:112328458-112328477 None:intergenic 30.0%
! ACTTTTTGTTGCATGTTTCT+TGG + Chr6:112326959-112326978 MsG0680035792.01.T01:intron 30.0%
! CTAAAATCTTTTGCAAACAC+CGG + Chr6:112328278-112328297 MsG0680035792.01.T01:CDS 30.0%
! TACTTTTGTTGCATGTTTCT+TGG + Chr6:112326887-112326906 MsG0680035792.01.T01:intron 30.0%
! TTTGGAACTAGATAGAAGAT+AGG + Chr6:112327099-112327118 MsG0680035792.01.T01:intron 30.0%
AACTGCATCTACATGAAAAC+CGG + Chr6:112329638-112329657 MsG0680035792.01.T01:CDS 35.0%
ATAACTGAACACACACTACA+TGG - Chr6:112327234-112327253 None:intergenic 35.0%
ATGGAACAAATGTGGTTGTA+GGG - Chr6:112327889-112327908 None:intergenic 35.0%
CACTCGAATGAATGTAATGT+TGG + Chr6:112327958-112327977 MsG0680035792.01.T01:intron 35.0%
CGAATGAATGTAATGTTGGT+TGG + Chr6:112327962-112327981 MsG0680035792.01.T01:intron 35.0%
GAAGTTATTGATCCTAACAC+TGG + Chr6:112328755-112328774 MsG0680035792.01.T01:CDS 35.0%
GAATTGGGGAATAGTTTATC+CGG + Chr6:112329066-112329085 MsG0680035792.01.T01:CDS 35.0%
GCTACTAGTTCAACTTCAAA+TGG + Chr6:112329157-112329176 MsG0680035792.01.T01:CDS 35.0%
GTATAAAGCAAACCAGTGTT+AGG - Chr6:112328770-112328789 None:intergenic 35.0%
TACATTCATTCGAGTGAAAC+TGG - Chr6:112327954-112327973 None:intergenic 35.0%
TACTTGGATCCTTATCAACA+AGG - Chr6:112329408-112329427 None:intergenic 35.0%
TATTTCCAGATTGTTGCTAC+GGG + Chr6:112328132-112328151 MsG0680035792.01.T01:CDS 35.0%
TCTAGAGATAGAGAGAACAA+TGG + Chr6:112326756-112326775 MsG0680035792.01.T01:exon 35.0%
TCTCAAATTATTAGCGGTGT+TGG + Chr6:112327381-112327400 MsG0680035792.01.T01:intron 35.0%
TGATGGGATATGAACATACT+TGG - Chr6:112329424-112329443 None:intergenic 35.0%
TTCAGGACTTTCTGTAACTT+CGG - Chr6:112328441-112328460 None:intergenic 35.0%
TTTATGTTTGGATACACTCG+TGG + Chr6:112327507-112327526 MsG0680035792.01.T01:intron 35.0%
TTTCGCTGTTCAACGAAAAT+AGG + Chr6:112329020-112329039 MsG0680035792.01.T01:CDS 35.0%
! ACTACATGGTTGGTTAATGA+TGG - Chr6:112327220-112327239 None:intergenic 35.0%
! TCAGTTTTGCTTATGCTTCT+TGG + Chr6:112326811-112326830 MsG0680035792.01.T01:CDS 35.0%
! TTAGTTTGGAACTGAGAGAA+TGG - Chr6:112328344-112328363 None:intergenic 35.0%
! TTTGGAATCTGAGAGGAATT+GGG + Chr6:112329051-112329070 MsG0680035792.01.T01:CDS 35.0%
!! GTTAAGCTTGTTACCCTTTA+TGG + Chr6:112327048-112327067 MsG0680035792.01.T01:intron 35.0%
!! TCTGATGTTGCTTGTAGTTT+TGG + Chr6:112329370-112329389 MsG0680035792.01.T01:CDS 35.0%
!!! AGTTTTGTCGGAATTTGCTA+TGG + Chr6:112328155-112328174 MsG0680035792.01.T01:CDS 35.0%
!!! ATGTTGCTTGTAGTTTTGGA+GGG + Chr6:112329374-112329393 MsG0680035792.01.T01:CDS 35.0%
!!! CAGCTATTGCATGGTTTTTT+AGG + Chr6:112329498-112329517 MsG0680035792.01.T01:intron 35.0%
AAGTTATCCGGCTCAAAACA+AGG - Chr6:112329298-112329317 None:intergenic 40.0%
AATGCGATAAATTGGGCTTG+TGG + Chr6:112329229-112329248 MsG0680035792.01.T01:CDS 40.0%
ACTAGTAGCATTTGCATCTG+CGG - Chr6:112329146-112329165 None:intergenic 40.0%
ACTGCATCTACATGAAAACC+GGG + Chr6:112329639-112329658 MsG0680035792.01.T01:CDS 40.0%
ATAGAGAGAACAATGGCAAG+AGG + Chr6:112326763-112326782 MsG0680035792.01.T01:exon 40.0%
ATCTTAGTGGCTGGATAGTA+AGG - Chr6:112328398-112328417 None:intergenic 40.0%
ATGTATGTGATCTTAGTGGC+TGG - Chr6:112328407-112328426 None:intergenic 40.0%
CATGTAGATGCAGTTGTCAT+AGG - Chr6:112329633-112329652 None:intergenic 40.0%
GATGGAACAAATGTGGTTGT+AGG - Chr6:112327890-112327909 None:intergenic 40.0%
GTAATTATATGGGTCGGTGT+CGG - Chr6:112327344-112327363 None:intergenic 40.0%
GTAGTGTGTGTTCAGTTATG+CGG + Chr6:112327235-112327254 MsG0680035792.01.T01:intron 40.0%
GTTAGGATCAATAACTTCGG+AGG - Chr6:112328753-112328772 None:intergenic 40.0%
GTTCAACGAAAATAGGAAGC+CGG + Chr6:112329027-112329046 MsG0680035792.01.T01:CDS 40.0%
TAGAGAGAACAATGGCAAGA+GGG + Chr6:112326764-112326783 MsG0680035792.01.T01:exon 40.0%
TAGTGTGTGTTCAGTTATGC+GGG + Chr6:112327236-112327255 MsG0680035792.01.T01:intron 40.0%
TCTACATGAAAACCGGGTAA+AGG + Chr6:112329645-112329664 MsG0680035792.01.T01:CDS 40.0%
TGGAACAAATGTGGTTGTAG+GGG - Chr6:112327888-112327907 None:intergenic 40.0%
TGTCACTATCGTACGAATGT+TGG - Chr6:112327565-112327584 None:intergenic 40.0%
TGTTCTTGTTCTTGCTTGCT+TGG - Chr6:112326711-112326730 None:intergenic 40.0%
TTCAACGAAAATAGGAAGCC+GGG + Chr6:112329028-112329047 MsG0680035792.01.T01:CDS 40.0%
TTGGAATCTGAGAGGAATTG+GGG + Chr6:112329052-112329071 MsG0680035792.01.T01:CDS 40.0%
! AAGAGGGTTTTGCTTCATCT+TGG + Chr6:112326780-112326799 MsG0680035792.01.T01:CDS 40.0%
! ACTATTTCTCAGCCAAGTGT+CGG - Chr6:112328369-112328388 None:intergenic 40.0%
! GTGTACAGCCTAGATTTTAC+TGG + Chr6:112329100-112329119 MsG0680035792.01.T01:CDS 40.0%
! GTTTGGAATCTGAGAGGAAT+TGG + Chr6:112329050-112329069 MsG0680035792.01.T01:CDS 40.0%
! TTGTGGTACTTCTGGAAATG+TGG + Chr6:112329246-112329265 MsG0680035792.01.T01:CDS 40.0%
!! CTTGCTATTAAAAGCACCAG+CGG - Chr6:112328594-112328613 None:intergenic 40.0%
!!! GATGTTGCTTGTAGTTTTGG+AGG + Chr6:112329373-112329392 MsG0680035792.01.T01:CDS 40.0%
AAACTCCCGTAGCAACAATC+TGG - Chr6:112328140-112328159 None:intergenic 45.0%
AAAGTCATGGTAACCGAGAC+AGG + Chr6:112328857-112328876 MsG0680035792.01.T01:CDS 45.0%
AACTGTGACACCTTATCAGG+TGG - Chr6:112328203-112328222 None:intergenic 45.0%
AATCTATGAAGCACGGACAC+TGG - Chr6:112327429-112327448 None:intergenic 45.0%
AATTGGGCTTGTGGTACTTC+TGG + Chr6:112329238-112329257 MsG0680035792.01.T01:CDS 45.0%
ACACGACATGTGTCTGACAA+CGG - Chr6:112327315-112327334 None:intergenic 45.0%
ACACTTTGGTTGGAGAGTCA+CGG - Chr6:112328703-112328722 None:intergenic 45.0%
ACAGACACTCCTCGAATTAC+AGG + Chr6:112327285-112327304 MsG0680035792.01.T01:intron 45.0%
ACCAACTGTGACACCTTATC+AGG - Chr6:112328206-112328225 None:intergenic 45.0%
ACGAATGTCAGTCAACGACA+TGG - Chr6:112327831-112327850 None:intergenic 45.0%
AGGATCAATAACTTCGGAGG+AGG - Chr6:112328750-112328769 None:intergenic 45.0%
AGTGTGTGTTCAGTTATGCG+GGG + Chr6:112327237-112327256 MsG0680035792.01.T01:intron 45.0%
CATTCGAGTGAAACTGGACT+CGG - Chr6:112327948-112327967 None:intergenic 45.0%
CCACATTTGTTCCATCGACA+AGG + Chr6:112327894-112327913 MsG0680035792.01.T01:intron 45.0%
CCTTGTCGATGGAACAAATG+TGG - Chr6:112327897-112327916 None:intergenic 45.0%
CTAGGCTGTACACGTTTGTT+AGG - Chr6:112329093-112329112 None:intergenic 45.0%
CTCGAACAATGCATAGTCCA+AGG - Chr6:112328726-112328745 None:intergenic 45.0%
CTGAACACACACTACATGGT+TGG - Chr6:112327230-112327249 None:intergenic 45.0%
GACCTCGTCCAGTAAAATCT+AGG - Chr6:112329111-112329130 None:intergenic 45.0%
GACTGGTGTCCTTGTTGATA+AGG + Chr6:112329396-112329415 MsG0680035792.01.T01:CDS 45.0%
GAGTCACGGTATGCGTAATA+AGG - Chr6:112328689-112328708 None:intergenic 45.0%
GTTTCCAGTACTCATTCCCT+TGG + Chr6:112328542-112328561 MsG0680035792.01.T01:CDS 45.0%
TAAACCCTATGAGACACCGT+CGG - Chr6:112327661-112327680 None:intergenic 45.0%
TAGTCCAAGGACACTTTGGT+TGG - Chr6:112328713-112328732 None:intergenic 45.0%
TAGTGGCTGGATAGTAAGGA+AGG - Chr6:112328394-112328413 None:intergenic 45.0%
TCATTTCCTGAAGCCACTGT+TGG + Chr6:112328619-112328638 MsG0680035792.01.T01:CDS 45.0%
TCCAATCATAAGTTCGACGC+CGG - Chr6:112328300-112328319 None:intergenic 45.0%
TCCTTAGGTGAACCTTTCGA+AGG - Chr6:112328887-112328906 None:intergenic 45.0%
TCGTGGACACTTCAGTTTGA+AGG + Chr6:112327524-112327543 MsG0680035792.01.T01:intron 45.0%
TCTACAAAAGGTGGTCAACC+AGG - Chr6:112327861-112327880 None:intergenic 45.0%
TCTCTAGATTCTCACTGCTC+TGG - Chr6:112326744-112326763 None:intergenic 45.0%
TCTTCTCAGCAGCTATTGCA+TGG + Chr6:112329489-112329508 MsG0680035792.01.T01:intron 45.0%
TGCATAGTCCAAGGACACTT+TGG - Chr6:112328717-112328736 None:intergenic 45.0%
TGCTGCAAGGACATTAGTCA+TGG - Chr6:112328489-112328508 None:intergenic 45.0%
TGTAGGGGAGACTCTACAAA+AGG - Chr6:112327873-112327892 None:intergenic 45.0%
TTCCTCTCAGATTCCAAACC+CGG - Chr6:112329049-112329068 None:intergenic 45.0%
! ACCTGATAAGGTGTCACAGT+TGG + Chr6:112328202-112328221 MsG0680035792.01.T01:CDS 45.0%
! AGCCTAGATTTTACTGGACG+AGG + Chr6:112329106-112329125 MsG0680035792.01.T01:CDS 45.0%
! CTGTACACGTTTGTTAGGTC+CGG - Chr6:112329088-112329107 None:intergenic 45.0%
! GTCGTTGACTGACATTCGTT+GGG + Chr6:112327832-112327851 MsG0680035792.01.T01:intron 45.0%
! TCGTTGACTGACATTCGTTG+GGG + Chr6:112327833-112327852 MsG0680035792.01.T01:intron 45.0%
! TGTCGTTGACTGACATTCGT+TGG + Chr6:112327831-112327850 MsG0680035792.01.T01:intron 45.0%
!! CTATTAAAAGCACCAGCGGA+AGG - Chr6:112328590-112328609 None:intergenic 45.0%
!! TGTTGCTACGGGAGTTTTGT+CGG + Chr6:112328143-112328162 MsG0680035792.01.T01:CDS 45.0%
!!! CATCAGAAGCACCATTTTGC+TGG - Chr6:112329357-112329376 None:intergenic 45.0%
AACGCCAAGGGAATGAGTAC+TGG - Chr6:112328549-112328568 None:intergenic 50.0%
AACGGGACACCTGTAATTCG+AGG - Chr6:112327297-112327316 None:intergenic 50.0%
AGGGGAGACTCTACAAAAGG+TGG - Chr6:112327870-112327889 None:intergenic 50.0%
CACGACATGTGTCTGACAAC+GGG - Chr6:112327314-112327333 None:intergenic 50.0%
CGAAAATAGGAAGCCGGGTT+TGG + Chr6:112329033-112329052 MsG0680035792.01.T01:CDS 50.0%
CTTGCAGCACTCAAGAAAGC+CGG + Chr6:112328500-112328519 MsG0680035792.01.T01:CDS 50.0%
GAAACTCCAACAGTGGCTTC+AGG - Chr6:112328628-112328647 None:intergenic 50.0%
GCAAGGACATTAGTCATGGC+TGG - Chr6:112328485-112328504 None:intergenic 50.0%
GCATGCGAGACGAAGTTATC+CGG - Chr6:112329310-112329329 None:intergenic 50.0%
GCCTTCGAAAGGTTCACCTA+AGG + Chr6:112328883-112328902 MsG0680035792.01.T01:CDS 50.0%
TATCCGGCTCAAAACAAGGC+TGG - Chr6:112329294-112329313 None:intergenic 50.0%
TCATGGTAACCGAGACAGGT+TGG + Chr6:112328861-112328880 MsG0680035792.01.T01:CDS 50.0%
TCCAAACTAACGCCGACACT+TGG + Chr6:112328354-112328373 MsG0680035792.01.T01:CDS 50.0%
TGTGACACCTTATCAGGTGG+AGG - Chr6:112328200-112328219 None:intergenic 50.0%
TTTCGAAGGCCAACCTGTCT+CGG - Chr6:112328873-112328892 None:intergenic 50.0%
! ACCGGCGTCGAACTTATGAT+TGG + Chr6:112328296-112328315 MsG0680035792.01.T01:CDS 50.0%
! CTCTCCAACCAAAGTGTCCT+TGG + Chr6:112328706-112328725 MsG0680035792.01.T01:CDS 50.0%
!! TAAAAGCACCAGCGGAAGGA+GGG - Chr6:112328586-112328605 None:intergenic 50.0%
!! TAAACGTCTAGCTCTTCCCC+CGG - Chr6:112328995-112329014 None:intergenic 50.0%
!! TTAAAAGCACCAGCGGAAGG+AGG - Chr6:112328587-112328606 None:intergenic 50.0%
!!! GCTTGTAGTTTTGGAGGGAC+TGG + Chr6:112329379-112329398 MsG0680035792.01.T01:CDS 50.0%
!!! TAGCCAGCCTTGTTTTGAGC+CGG + Chr6:112329288-112329307 MsG0680035792.01.T01:CDS 50.0%
AACCGGTACACCTGCAAAGC+CGG + Chr6:112328973-112328992 MsG0680035792.01.T01:CDS 55.0%
ACACCTTATCAGGTGGAGGC+AGG - Chr6:112328196-112328215 None:intergenic 55.0%
ACGATCGAGACAGAACGCCA+AGG - Chr6:112328562-112328581 None:intergenic 55.0%
CGATCGAGACAGAACGCCAA+GGG - Chr6:112328561-112328580 None:intergenic 55.0%
CTATGAGACACCGTCGGACT+CGG - Chr6:112327655-112327674 None:intergenic 55.0%
CTGACATTCGTTGGGGAACC+TGG + Chr6:112327840-112327859 MsG0680035792.01.T01:intron 55.0%
GAGTCCGACGGTGTCTCATA+GGG + Chr6:112327654-112327673 MsG0680035792.01.T01:intron 55.0%
GCATCTGCGGTCATGTCAAC+AGG - Chr6:112329133-112329152 None:intergenic 55.0%
GCCACTGTTGGAGTTTCTCG+CGG + Chr6:112328631-112328650 MsG0680035792.01.T01:CDS 55.0%
GGAGTAGCAGCTGTCTCCTT+AGG - Chr6:112328902-112328921 None:intergenic 55.0%
TCCGCGAGAAACTCCAACAG+TGG - Chr6:112328635-112328654 None:intergenic 55.0%
TGACCTGCCTCCACCTGATA+AGG + Chr6:112328190-112328209 MsG0680035792.01.T01:CDS 55.0%
TTGTGTGTGTCCGAGTCCGA+CGG + Chr6:112327642-112327661 MsG0680035792.01.T01:intron 55.0%
! AGCCGGGTTTGGAATCTGAG+AGG + Chr6:112329044-112329063 MsG0680035792.01.T01:CDS 55.0%
! CGGCTTTCTTGAGTGCTGCA+AGG - Chr6:112328502-112328521 None:intergenic 55.0%
! GGCTCAAAACAAGGCTGGCT+AGG - Chr6:112329289-112329308 None:intergenic 55.0%
!! GAGACAGGTTGGCCTTCGAA+AGG + Chr6:112328872-112328891 MsG0680035792.01.T01:CDS 55.0%
!! GCCAAGTGTCGGCGTTAGTT+TGG - Chr6:112328358-112328377 None:intergenic 55.0%
ACCGGTACACCTGCAAAGCC+GGG + Chr6:112328974-112328993 MsG0680035792.01.T01:CDS 60.0%
CACGGACACTGGACACGACA+CGG - Chr6:112327418-112327437 None:intergenic 60.0%
CGAGTCCGACGGTGTCTCAT+AGG + Chr6:112327653-112327672 MsG0680035792.01.T01:intron 60.0%
! TCGTGTGCGAGCCTTGTCGA+TGG - Chr6:112327908-112327927 None:intergenic 60.0%
AGCTCTTCCCCCGGCTTTGC+AGG - Chr6:112328986-112329005 None:intergenic 65.0%
CCCCGGCTTTGCAGGTGTAC+CGG - Chr6:112328978-112328997 None:intergenic 65.0%
CCGGTACACCTGCAAAGCCG+GGG + Chr6:112328975-112328994 MsG0680035792.01.T01:CDS 65.0%
CGATCGTTCCCTCCTTCCGC+TGG + Chr6:112328575-112328594 MsG0680035792.01.T01:CDS 65.0%
CGGTACACCTGCAAAGCCGG+GGG + Chr6:112328976-112328995 MsG0680035792.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 112326671 112329664 112326671 ID=MsG0680035792.01;Name=MsG0680035792.01
Chr6 mRNA 112326671 112329664 112326671 ID=MsG0680035792.01.T01;Parent=MsG0680035792.01;Name=MsG0680035792.01.T01;_AED=0.29;_eAED=0.30;_QI=104|0.5|0.33|1|0.5|0.33|3|0|491
Chr6 exon 112326671 112326832 112326671 ID=MsG0680035792.01.T01:exon:15067;Parent=MsG0680035792.01.T01
Chr6 exon 112328042 112329424 112328042 ID=MsG0680035792.01.T01:exon:15068;Parent=MsG0680035792.01.T01
Chr6 exon 112329630 112329664 112329630 ID=MsG0680035792.01.T01:exon:15069;Parent=MsG0680035792.01.T01
Chr6 five_prime_UTR 112326671 112326774 112326671 ID=MsG0680035792.01.T01:five_prime_utr;Parent=MsG0680035792.01.T01
Chr6 CDS 112326775 112326832 112326775 ID=MsG0680035792.01.T01:cds;Parent=MsG0680035792.01.T01
Chr6 CDS 112328042 112329424 112328042 ID=MsG0680035792.01.T01:cds;Parent=MsG0680035792.01.T01
Chr6 CDS 112329630 112329664 112329630 ID=MsG0680035792.01.T01:cds;Parent=MsG0680035792.01.T01
Gene Sequence

>MsG0680035792.01.T01

ATGGCAAGAGGGTTTTGCTTCATCTTGGTTGTTGCTTCAGTTTTGCTTATGCTTCTTGATACTATTCTCAATTGTAATTCTTATTTCTTCTATTTGATCTTTATGGAATTTTGTAATTCTTATTTATTTTATTTGATTTTTATGAATTTATTTCCAGATTGTTGCTACGGGAGTTTTGTCGGAATTTGCTATGGAAGAAATGCTGATGACCTGCCTCCACCTGATAAGGTGTCACAGTTGGTTCAAGAACACAAAATCAAATATGTCAGAATTTACGATTCTAACATACAAGTTCTAAAATCTTTTGCAAACACCGGCGTCGAACTTATGATTGGAATTCCAAATCTAGATTTGCTTCCATTCTCTCAGTTCCAAACTAACGCCGACACTTGGCTGAGAAATAGTATCCTTCCTTACTATCCAGCCACTAAGATCACATACATAACTGTTGGCGCCGAAGTTACAGAAAGTCCTGAAAACATTTCTGCATTAGTCGTGCCAGCCATGACTAATGTCCTTGCAGCACTCAAGAAAGCCGGACTTCATAAGAAGATAAAAGTTTCCAGTACTCATTCCCTTGGCGTTCTGTCTCGATCGTTCCCTCCTTCCGCTGGTGCTTTTAATAGCAAGCATGCTCATTTCCTGAAGCCACTGTTGGAGTTTCTCGCGGAAAATCAATCACCTTTTATGATCGATCTATATCCTTATTACGCATACCGTGACTCTCCAACCAAAGTGTCCTTGGACTATGCATTGTTCGAGTCCTCCTCCGAAGTTATTGATCCTAACACTGGTTTGCTTTATACAAACATGTTTGATGCTCAGATTGATGCAATTTATTTTGCGTTAACGGCGTTGAATTTCAGAACGATTAAAGTCATGGTAACCGAGACAGGTTGGCCTTCGAAAGGTTCACCTAAGGAGACAGCTGCTACTCCTGATAATGCACAAACATATAATACCAATCTGATAAGACATGTTATCAATGAAACCGGTACACCTGCAAAGCCGGGGGAAGAGCTAGACGTTTACATATTTTCGCTGTTCAACGAAAATAGGAAGCCGGGTTTGGAATCTGAGAGGAATTGGGGAATAGTTTATCCGGACCTAACAAACGTGTACAGCCTAGATTTTACTGGACGAGGTCCTGTTGACATGACCGCAGATGCAAATGCTACTAGTTCAACTTCAAATGGAACAAAATGGTGCATTGCTTCGAGTAATGCAACACAACTTGACTTACAGAATGCGATAAATTGGGCTTGTGGTACTTCTGGAAATGTGGACTGTACTGCTATTCAGCCTAGCCAGCCTTGTTTTGAGCCGGATAACTTCGTCTCGCATGCTTCATATGCTTTTAATAGCTATTACCAGCAAAATGGTGCTTCTGATGTTGCTTGTAGTTTTGGAGGGACTGGTGTCCTTGTTGATAAGGATCCAACCTATGACAACTGCATCTACATGAAAACCGGGTAA

Protein sequence

>MsG0680035792.01.T01

MARGFCFILVVASVLLMLLDTILNCNSYFFYLIFMEFCNSYLFYLIFMNLFPDCCYGSFVGICYGRNADDLPPPDKVSQLVQEHKIKYVRIYDSNIQVLKSFANTGVELMIGIPNLDLLPFSQFQTNADTWLRNSILPYYPATKITYITVGAEVTESPENISALVVPAMTNVLAALKKAGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSKHAHFLKPLLEFLAENQSPFMIDLYPYYAYRDSPTKVSLDYALFESSSEVIDPNTGLLYTNMFDAQIDAIYFALTALNFRTIKVMVTETGWPSKGSPKETAATPDNAQTYNTNLIRHVINETGTPAKPGEELDVYIFSLFNENRKPGLESERNWGIVYPDLTNVYSLDFTGRGPVDMTADANATSSTSNGTKWCIASSNATQLDLQNAINWACGTSGNVDCTAIQPSQPCFEPDNFVSHASYAFNSYYQQNGASDVACSFGGTGVLVDKDPTYDNCIYMKTG*