AlfalfaGEDB | MsG0480023426.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023426.01

KEGG: K11253
GO: GO:0000786 GO:0003677 GO:0046982
PFAM: PF00125

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023426.01.T01	ACG30033.1	81.633	147	26	1	1	146	1	147	5.64E-76	233

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023426.01.T01	P68427	86.614	127	17	0	1	127	1	127	7.71E-74	219

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023426.01.T01	B6SYV0	81.633	147	26	1	1	146	1	147	2.70e-76	233

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0480023426.01	0.866426	2.875986e-65	9.688771e-62
MsG0080048258.01	MsG0480023426.01	0.830895	2.269288e-55	2.423381e-52
MsG0080048775.01	MsG0480023426.01	0.836910	7.093439e-57	9.066939e-54
MsG0080048781.01	MsG0480023426.01	0.806211	9.181654e-50	4.955093e-47
MsG0080048797.01	MsG0480023426.01	0.867726	1.106171e-65	3.901413e-62
MsG0180001293.01	MsG0480023426.01	0.870811	1.100625e-66	4.339408e-63
MsG0180001588.01	MsG0480023426.01	0.841986	3.406730e-58	5.092122e-55
MsG0180001719.01	MsG0480023426.01	0.899225	2.445291e-77	2.995272e-73
MsG0180002134.01	MsG0480023426.01	0.856438	3.217061e-62	7.678939e-59
MsG0180002135.01	MsG0480023426.01	0.815683	8.154339e-52	5.660010e-49
MsG0180002217.01	MsG0480023426.01	0.833494	5.164940e-56	5.957977e-53
MsG0180002218.01	MsG0480023426.01	0.866055	3.770520e-65	1.253719e-61
MsG0180002397.01	MsG0480023426.01	0.860501	1.976831e-63	5.415191e-60
MsG0180002428.01	MsG0480023426.01	0.859234	4.761662e-63	1.248750e-59
MsG0180002583.01	MsG0480023426.01	0.801526	8.635720e-49	4.133321e-46
MsG0180003421.01	MsG0480023426.01	0.800722	1.261593e-48	5.916599e-46
MsG0180003698.01	MsG0480023426.01	0.826882	2.125771e-54	2.019116e-51
MsG0180003857.01	MsG0480023426.01	0.892285	1.827158e-74	1.658813e-70
MsG0180003905.01	MsG0480023426.01	0.867740	1.094902e-65	3.863834e-62
MsG0180003983.01	MsG0480023426.01	0.825021	5.881509e-54	5.298057e-51
MsG0180004120.01	MsG0480023426.01	0.923298	3.193876e-89	1.267533e-84
MsG0180004185.01	MsG0480023426.01	0.878170	3.488685e-69	1.803138e-65
MsG0180004299.01	MsG0480023426.01	0.859563	3.793284e-63	1.006054e-59
MsG0180004471.01	MsG0480023426.01	0.850596	1.532680e-60	3.017745e-57
MsG0180004538.01	MsG0480023426.01	0.909409	5.882808e-82	1.142427e-77
MsG0180004583.01	MsG0480023426.01	0.917162	7.422185e-86	2.112188e-81
MsG0180004660.01	MsG0480023426.01	0.802002	6.897468e-49	3.341315e-46
MsG0180004828.01	MsG0480023426.01	0.800401	1.466254e-48	6.820935e-46
MsG0180004835.01	MsG0480023426.01	0.820929	5.290704e-53	4.243901e-50
MsG0180004994.01	MsG0480023426.01	0.839496	1.530940e-57	2.117989e-54
MsG0180004995.01	MsG0480023426.01	0.874405	6.928075e-68	3.114846e-64
MsG0180005048.01	MsG0480023426.01	0.895369	1.023569e-75	1.058875e-71
MsG0180005655.01	MsG0480023426.01	0.887671	1.163019e-72	8.731277e-69
MsG0180006062.01	MsG0480023426.01	0.833376	5.524762e-56	6.351102e-53
MsG0180006133.01	MsG0480023426.01	0.879891	8.603737e-70	4.746533e-66
MsG0180006183.01	MsG0480023426.01	0.806684	7.298030e-50	3.986041e-47
MsG0280006378.01	MsG0480023426.01	0.810282	1.245739e-50	7.477892e-48
MsG0280006398.01	MsG0480023426.01	0.800522	1.385523e-48	6.465072e-46
MsG0380012118.01	MsG0480023426.01	0.834359	3.137330e-56	3.714467e-53
MsG0380012956.01	MsG0480023426.01	0.873814	1.098662e-67	4.832527e-64
MsG0380013584.01	MsG0480023426.01	0.803967	2.706900e-49	1.378944e-46
MsG0380014542.01	MsG0480023426.01	0.919496	4.185740e-87	1.348425e-82
MsG0380014544.01	MsG0480023426.01	0.877508	5.942160e-69	2.995368e-65
MsG0380014666.01	MsG0480023426.01	0.928506	2.623725e-92	1.387754e-87
MsG0480018767.01	MsG0480023426.01	0.805351	1.392169e-49	7.348748e-47
MsG0480018785.01	MsG0480023426.01	0.823576	1.286058e-53	1.111664e-50
MsG0480019601.01	MsG0480023426.01	0.835954	1.241692e-56	1.542044e-53
MsG0480020366.01	MsG0480023426.01	0.823614	1.260000e-53	1.090326e-50
MsG0480020398.01	MsG0480023426.01	0.925918	9.556788e-91	4.380077e-86
MsG0480020856.01	MsG0480023426.01	0.860106	2.602083e-63	7.033026e-60
MsG0480020920.01	MsG0480023426.01	0.818254	2.157464e-52	1.606682e-49
MsG0480020921.01	MsG0480023426.01	0.907409	5.231522e-81	9.270978e-77
MsG0480020926.01	MsG0480023426.01	0.904016	1.906273e-79	2.892329e-75
MsG0480020937.01	MsG0480023426.01	0.915258	7.284830e-85	1.886783e-80
MsG0480020970.01	MsG0480023426.01	0.889396	2.515518e-73	2.026014e-69
MsG0480021015.01	MsG0480023426.01	0.850545	1.584228e-60	3.114035e-57
MsG0480021016.01	MsG0480023426.01	0.815285	9.996426e-52	6.863319e-49
MsG0480021048.01	MsG0480023426.01	0.846033	2.800648e-59	4.757943e-56
MsG0480021100.01	MsG0480023426.01	0.948885	3.870765e-107	7.418812e-102
MsG0480021301.01	MsG0480023426.01	0.929353	7.847004e-93	4.357985e-88
MsG0480021456.01	MsG0480023426.01	0.862077	6.540140e-64	1.891069e-60
MsG0480021486.01	MsG0480023426.01	0.804162	2.465866e-49	1.262412e-46
MsG0480021704.01	MsG0480023426.01	0.872656	2.688668e-67	1.134256e-63
MsG0480021740.01	MsG0480023426.01	0.807394	5.164971e-50	2.873572e-47
MsG0480021773.01	MsG0480023426.01	0.927156	1.739288e-91	8.550882e-87
MsG0480021902.01	MsG0480023426.01	0.924559	5.989759e-90	2.547709e-85
MsG0480022307.01	MsG0480023426.01	0.954549	2.304321e-112	6.540881e-107
MsG0480022320.01	MsG0480023426.01	0.843286	1.538025e-58	2.395064e-55
MsG0480022378.01	MsG0480023426.01	0.892766	1.172528e-74	1.086375e-70
MsG0480022559.01	MsG0480023426.01	0.802463	5.543875e-49	2.717413e-46
MsG0480022682.01	MsG0480023426.01	0.847855	8.879431e-60	1.599335e-56
MsG0480022784.01	MsG0480023426.01	0.888641	4.928510e-73	3.849643e-69
MsG0480022991.01	MsG0480023426.01	0.827802	1.279460e-54	1.248220e-51
MsG0480023003.01	MsG0480023426.01	0.882179	1.293890e-70	7.802493e-67
MsG0480023414.01	MsG0480023426.01	0.868649	5.582313e-66	2.034902e-62
MsG0480023424.01	MsG0480023426.01	0.921231	4.662092e-88	1.647264e-83
MsG0480023426.01	MsG0480023428.01	0.887474	1.382711e-72	1.029758e-68
MsG0480023426.01	MsG0480023626.01	0.846806	1.723280e-59	3.001661e-56
MsG0480023426.01	MsG0480023653.01	0.854077	1.564652e-61	3.453818e-58
MsG0480023426.01	MsG0480023679.01	0.862838	3.816191e-64	1.133370e-60
MsG0480023426.01	MsG0480023706.01	0.897620	1.178861e-76	1.343114e-72
MsG0480023426.01	MsG0480023842.01	0.928912	1.472777e-92	7.988146e-88
MsG0480023426.01	MsG0480023913.01	0.866884	2.056644e-65	7.042366e-62
MsG0480023426.01	MsG0480024002.01	0.858849	6.209546e-63	1.607125e-59
MsG0480023426.01	MsG0480024019.01	0.910240	2.337955e-82	4.728686e-78
MsG0480023426.01	MsG0580024060.01	0.805302	1.425552e-49	7.515430e-47
MsG0480023426.01	MsG0580024158.01	0.819883	9.193499e-53	7.163004e-50
MsG0480023426.01	MsG0580024276.01	0.924800	4.336901e-90	1.868051e-85
MsG0480023426.01	MsG0580024742.01	0.828364	9.367435e-55	9.290692e-52
MsG0480023426.01	MsG0580024773.01	0.808668	2.765492e-50	1.590718e-47
MsG0480023426.01	MsG0580024787.01	0.862162	6.160839e-64	1.786973e-60
MsG0480023426.01	MsG0580024954.01	0.805285	1.437251e-49	7.573762e-47
MsG0480023426.01	MsG0580025177.01	0.838668	2.508325e-57	3.383336e-54
MsG0480023426.01	MsG0580025186.01	0.855563	5.801146e-62	1.344857e-58
MsG0480023426.01	MsG0580025203.01	0.829211	5.842898e-55	5.940900e-52
MsG0480023426.01	MsG0580025504.01	0.958482	2.114504e-116	7.911382e-111
MsG0480023426.01	MsG0580025506.01	0.869679	2.584125e-66	9.781401e-63
MsG0480023426.01	MsG0580026343.01	0.838918	2.161359e-57	2.937462e-54
MsG0480023426.01	MsG0580028927.01	0.891445	3.947377e-74	3.462135e-70
MsG0480023426.01	MsG0580028955.01	0.938958	2.838139e-99	2.829513e-94
MsG0480023426.01	MsG0580029102.01	0.804078	2.567502e-49	1.311662e-46
MsG0480023426.01	MsG0580029591.01	0.845857	3.125600e-59	5.280371e-56
MsG0480023426.01	MsG0580030141.01	0.829104	6.202823e-55	6.286328e-52
MsG0480023426.01	MsG0680031006.01	0.822449	2.354819e-53	1.971700e-50
MsG0480023426.01	MsG0680031356.01	0.857679	1.384645e-62	3.445420e-59
MsG0480023426.01	MsG0680034415.01	0.812928	3.312394e-51	2.133337e-48
MsG0480023426.01	MsG0680035350.01	0.827668	1.377762e-54	1.338957e-51
MsG0480023426.01	MsG0680035776.01	0.855332	6.772951e-62	1.558323e-58
MsG0480023426.01	MsG0680035792.01	0.880252	6.396472e-70	3.577921e-66
MsG0480023426.01	MsG0780036534.01	0.897609	1.190669e-76	1.355748e-72
MsG0480023426.01	MsG0780036553.01	0.820161	7.936836e-53	6.232383e-50
MsG0480023426.01	MsG0780037741.01	0.835247	1.875028e-56	2.280028e-53
MsG0480023426.01	MsG0780038402.01	0.834422	3.024284e-56	3.587486e-53
MsG0480023426.01	MsG0780038642.01	0.852552	4.284891e-61	8.985404e-58
MsG0480023426.01	MsG0780038647.01	0.811853	5.687740e-51	3.559514e-48
MsG0480023426.01	MsG0780038736.01	0.911619	4.951582e-83	1.069967e-78
MsG0480023426.01	MsG0780039536.01	0.848781	4.925257e-60	9.140163e-57
MsG0480023426.01	MsG0780039861.01	0.823154	1.614081e-53	1.378678e-50
MsG0480023426.01	MsG0780040459.01	0.841497	4.583769e-58	6.747869e-55
MsG0480023426.01	MsG0780040474.01	0.831322	1.783104e-55	1.928268e-52
MsG0480023426.01	MsG0780040554.01	0.880479	5.305944e-70	2.995007e-66
MsG0480023426.01	MsG0780040620.01	0.898589	4.575325e-77	5.442766e-73
MsG0480023426.01	MsG0780040641.01	0.894623	2.071205e-75	2.075257e-71
MsG0480023426.01	MsG0780040671.01	0.846422	2.194451e-59	3.775273e-56
MsG0480023426.01	MsG0780040899.01	0.890156	1.270788e-73	1.056171e-69
MsG0480023426.01	MsG0780040978.01	0.820841	5.541613e-53	4.434299e-50
MsG0480023426.01	MsG0780041008.01	0.842787	2.088864e-58	3.201673e-55
MsG0480023426.01	MsG0780041219.01	0.831728	1.416242e-55	1.550363e-52
MsG0480023426.01	MsG0780041232.01	0.852075	5.857402e-61	1.209841e-57
MsG0480023426.01	MsG0780041273.01	0.939908	5.755350e-100	6.092564e-95
MsG0480023426.01	MsG0780041359.01	0.904571	1.068028e-79	1.662297e-75
MsG0480023426.01	MsG0780041546.01	0.863254	2.837508e-64	8.547457e-61
MsG0480023426.01	MsG0880041930.01	0.802084	6.636066e-49	3.221469e-46
MsG0480023426.01	MsG0880042392.01	0.803323	3.682709e-49	1.845119e-46
MsG0480023426.01	MsG0880042833.01	0.810955	8.908982e-51	5.445377e-48
MsG0480023426.01	MsG0880043684.01	0.855319	6.832896e-62	1.571477e-58
MsG0480023426.01	MsG0880043714.01	0.842719	2.178413e-58	3.331642e-55
MsG0480023426.01	MsG0880043752.01	0.838384	2.969093e-57	3.970297e-54
MsG0480023426.01	MsG0880044103.01	0.824061	9.895762e-54	8.671467e-51
MsG0480023426.01	MsG0880044139.01	0.802764	4.805440e-49	2.373668e-46
MsG0480023426.01	MsG0880044437.01	0.881491	2.297223e-70	1.348713e-66
MsG0480023426.01	MsG0880045015.01	0.890917	6.382316e-74	5.475749e-70
MsG0480023426.01	MsG0880045356.01	0.843631	1.244192e-58	1.958774e-55
MsG0480023426.01	MsG0880045439.01	0.827327	1.663463e-54	1.600873e-51
MsG0480023426.01	MsG0880045584.01	0.827369	1.625589e-54	1.566424e-51
MsG0480023426.01	MsG0880045612.01	0.879507	1.177986e-69	6.402776e-66
MsG0480023426.01	MsG0880045647.01	0.917045	8.562677e-86	2.422448e-81
MsG0480023426.01	MsG0880045879.01	0.859730	3.379427e-63	9.015247e-60
MsG0480023426.01	MsG0880045989.01	0.805755	1.145261e-49	6.109007e-47
MsG0480023426.01	MsG0880046529.01	0.857712	1.354439e-62	3.373703e-59
MsG0480023426.01	MsG0880046904.01	0.899104	2.756581e-77	3.357700e-73
MsG0480023426.01	MsG0880046905.01	0.911704	4.498816e-83	9.761016e-79
MsG0480023426.01	MsG0880046906.01	0.834076	3.694311e-56	4.336525e-53
MsG0480023426.01	MsG0880046993.01	0.824108	9.647897e-54	8.465485e-51
MsG0480023426.01	MsG0880047311.01	0.809042	2.300126e-50	1.336284e-47
MsG0480023426.01	MsG0880047414.01	0.832726	8.017114e-56	9.038655e-53
MsG0480023426.01	MsG0880047649.01	0.893977	3.801082e-75	3.705943e-71
MsG0480023426.01	MsG0880047681.01	0.819194	1.320260e-52	1.009066e-49
MsG0380015090.01	MsG0480023426.01	0.882352	1.119465e-70	6.797031e-67
MsG0380015219.01	MsG0480023426.01	0.832482	9.218740e-56	1.031761e-52
MsG0380015340.01	MsG0480023426.01	0.918231	2.011102e-86	6.057342e-82
MsG0380015394.01	MsG0480023426.01	0.843770	1.142291e-58	1.805838e-55
MsG0380015402.01	MsG0480023426.01	0.856419	3.258458e-62	7.773085e-59
MsG0380015656.01	MsG0480023426.01	0.829533	4.882436e-55	5.010649e-52
MsG0380015756.01	MsG0480023426.01	0.814112	1.818153e-51	1.209217e-48
MsG0380015954.01	MsG0480023426.01	0.857822	1.255714e-62	3.139343e-59
MsG0380016027.01	MsG0480023426.01	0.882058	1.431252e-70	8.591047e-67
MsG0380016091.01	MsG0480023426.01	0.839937	1.174862e-57	1.647732e-54
MsG0380016092.01	MsG0480023426.01	0.818820	1.605810e-52	1.214714e-49
MsG0380016165.01	MsG0480023426.01	0.832223	1.068740e-55	1.186879e-52
MsG0380016217.01	MsG0480023426.01	0.832858	7.434305e-56	8.414433e-53
MsG0380016225.01	MsG0480023426.01	0.849660	2.804120e-60	5.354420e-57
MsG0380016250.01	MsG0480023426.01	0.809303	2.022894e-50	1.183434e-47
MsG0380016819.01	MsG0480023426.01	0.803341	3.650763e-49	1.829968e-46
MsG0380017128.01	MsG0480023426.01	0.860187	2.459284e-63	6.665720e-60
MsG0380017150.01	MsG0480023426.01	0.813489	2.494570e-51	1.631392e-48
MsG0380017181.01	MsG0480023426.01	0.841234	5.378511e-58	7.851855e-55
MsG0380017282.01	MsG0480023426.01	0.827541	1.478184e-54	1.431243e-51
MsG0380017332.01	MsG0480023426.01	0.876300	1.557538e-68	7.512821e-65
MsG0380017416.01	MsG0480023426.01	0.813264	2.794941e-51	1.816493e-48
MsG0380017440.01	MsG0480023426.01	0.817634	2.979110e-52	2.181169e-49
MsG0380017588.01	MsG0480023426.01	0.839777	1.293153e-57	1.804481e-54
MsG0380017605.01	MsG0480023426.01	0.866751	2.267885e-65	7.729686e-62
MsG0380017632.01	MsG0480023426.01	0.825351	4.915814e-54	4.469479e-51
MsG0380017696.01	MsG0480023426.01	0.888838	4.138879e-73	3.258058e-69
MsG0380017932.01	MsG0480023426.01	0.871838	5.035900e-67	2.060998e-63
MsG0380018055.01	MsG0480023426.01	0.865641	5.096390e-65	1.670451e-61
MsG0480018106.01	MsG0480023426.01	0.821609	3.685789e-53	3.012935e-50
MsG0480018228.01	MsG0480023426.01	0.926156	6.899598e-91	3.206108e-86
MsG0280006563.01	MsG0480023426.01	0.826175	3.133689e-54	2.916965e-51
MsG0280006717.01	MsG0480023426.01	0.806823	6.821061e-50	3.739054e-47
MsG0280006909.01	MsG0480023426.01	0.823403	1.411113e-53	1.213700e-50
MsG0280007003.01	MsG0480023426.01	0.802890	4.525661e-49	2.242614e-46
MsG0280007092.01	MsG0480023426.01	0.807561	4.760868e-50	2.660092e-47
MsG0280007688.01	MsG0480023426.01	0.841519	4.523580e-58	6.663750e-55
MsG0280007695.01	MsG0480023426.01	0.826764	2.267770e-54	2.146591e-51
MsG0280007919.01	MsG0480023426.01	0.884922	1.267012e-71	8.520875e-68
MsG0280009216.01	MsG0480023426.01	0.828700	7.772577e-55	7.784469e-52
MsG0280009866.01	MsG0480023426.01	0.808796	2.596930e-50	1.498773e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023426.01.T01	MTR_7g059070	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_5g029820	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_5g029770	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_4g065990	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_4g088150	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_2g035230	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_8g092720	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_8g063500	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_8g103245	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_8g092820	86.614	127	17	0	1	127	1	127	7.51e-75	219
MsG0480023426.01.T01	MTR_7g013610	86.614	127	17	0	1	127	100	226	1.08e-73	220
MsG0480023426.01.T01	MTR_4g097175	83.465	127	21	0	1	127	1	127	4.48e-72	213
MsG0480023426.01.T01	MTR_1g023630	83.465	127	21	0	1	127	1	127	4.48e-72	213
MsG0480023426.01.T01	MTR_8g061940	83.465	127	21	0	1	127	1	127	4.48e-72	213
MsG0480023426.01.T01	MTR_8g099430	82.677	127	22	0	1	127	1	127	1.36e-71	211
MsG0480023426.01.T01	MTR_4g097170	82.677	127	22	0	1	127	42	168	3.07e-70	209
MsG0480023426.01.T01	MTR_2g082310	78.571	126	20	1	1	119	1	126	1.24e-66	199
MsG0480023426.01.T01	MTR_2g082340	78.571	126	20	1	1	119	1	126	1.24e-66	199
MsG0480023426.01.T01	MTR_2g082370	72.263	137	28	1	1	127	1	137	2.32e-61	186
MsG0480023426.01.T01	MTR_2g082400	71.094	128	35	2	1	127	1	127	1.04e-55	171
MsG0480023426.01.T01	MTR_1g023630	95.122	82	4	0	1	82	1	82	9.46e-52	160
MsG0480023426.01.T01	MTR_7g013600	72.816	103	28	0	25	127	2	104	1.66e-48	152
MsG0480023426.01.T01	MTR_0197s0100	63.235	136	50	0	1	136	1	136	4.60e-46	147
MsG0480023426.01.T01	MTR_5g024630	63.964	111	37	2	1	111	1	108	3.89e-38	125
MsG0480023426.01.T01	MTR_7g023830	54.331	127	57	1	1	127	1	126	3.56e-37	124
MsG0480023426.01.T01	MTR_5g024530	54.128	109	27	3	19	127	68	153	2.39e-26	97.4
MsG0480023426.01.T01	MTR_7g023880	46.825	126	53	3	3	127	18	130	3.57e-26	96.7
MsG0480023426.01.T01	MTR_8g027840	53.521	71	32	1	37	106	28	98	6.28e-16	69.7
MsG0480023426.01.T01	MTR_5g024600	62.963	54	20	0	1	54	1	54	1.75e-15	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023426.01.T01	AT5G65360	85.827	127	18	0	1	127	1	127	2.51e-74	218
MsG0480023426.01.T01	AT5G10390	85.827	127	18	0	1	127	1	127	2.51e-74	218
MsG0480023426.01.T01	AT5G10400	85.827	127	18	0	1	127	1	127	2.51e-74	218
MsG0480023426.01.T01	AT3G27360	85.827	127	18	0	1	127	1	127	2.51e-74	218
MsG0480023426.01.T01	AT1G09200	85.827	127	18	0	1	127	1	127	2.51e-74	218
MsG0480023426.01.T01	AT5G10980	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40040	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40040	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40040	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40030	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40030	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40030	83.465	127	21	0	1	127	1	127	4.69e-72	213
MsG0480023426.01.T01	AT4G40030	83.465	127	21	0	1	127	29	155	1.19e-71	213
MsG0480023426.01.T01	AT5G65350	81.890	127	23	0	1	127	1	127	1.09e-70	209
MsG0480023426.01.T01	AT1G75600	80.315	127	25	0	1	127	1	127	6.95e-69	204
MsG0480023426.01.T01	AT1G13370	81.102	127	24	0	1	127	1	127	1.20e-68	204
MsG0480023426.01.T01	AT1G19890	77.953	127	20	2	1	119	1	127	1.07e-62	189
MsG0480023426.01.T01	AT5G12910	59.843	127	46	2	1	127	1	122	9.06e-48	151
MsG0480023426.01.T01	AT1G01370	41.026	117	66	2	24	138	63	178	3.47e-17	74.3
MsG0480023426.01.T01	AT1G01370	41.026	117	66	2	24	138	63	178	3.47e-17	74.3
MsG0480023426.01.T01	AT1G01370	41.026	117	66	2	24	138	63	178	3.47e-17	74.3
MsG0480023426.01.T01	AT1G01370	41.026	117	66	2	24	138	63	178	3.47e-17	74.3

Find 38 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTTTGTGGCGAGCTGCTTC+CGG	0.229871	4:+85070513	None:intergenic
CTTTGTGGCGAGCTGCTTCC+GGG	0.231058	4:+85070514	None:intergenic
CAGTGCTGGTTCTGCTCTTC+AGG	0.253307	4:-85070303	MsG0480023426.01.T01:CDS
AGGGTTACGAAATTGAAAAT+TGG	0.263711	4:+85070138	None:intergenic
TCTTGCAAGTTGAATGTCCT+TGG	0.320782	4:+85070200	None:intergenic
TCTCTCAAAGCAACTGTTCC+AGG	0.333816	4:+85070434	None:intergenic
GGGTTACGAAATTGAAAATT+GGG	0.339758	4:+85070139	None:intergenic
CTTGCAAGTTGAATGTCCTT+GGG	0.355623	4:+85070201	None:intergenic
GGAAGCAGCTGAAGCTTACT+TGG	0.369838	4:-85070282	MsG0480023426.01.T01:CDS
TGATTTCCGAGCGGCCTTTG+TGG	0.424857	4:+85070499	None:intergenic
GAGCAGAACCAGCACTGCTC+TGG	0.425796	4:+85070309	None:intergenic
TTCTTCACTCCTCCGGTCGC+CGG	0.442119	4:+85070473	None:intergenic
CTTAGATTCCAGAGCAGTGC+TGG	0.448605	4:-85070317	MsG0480023426.01.T01:CDS
GACGTTGGAATGGAAGTTTA+CGG	0.458530	4:+85070375	None:intergenic
CGGAAATCAGCTCCGGCGAC+CGG	0.461897	4:-85070485	MsG0480023426.01.T01:CDS
GCAGCTGAAGCTTACTTGGT+TGG	0.472209	4:-85070278	MsG0480023426.01.T01:CDS
CCACCGGCGGCAAGGCTCCC+CGG	0.480154	4:-85070532	MsG0480023426.01.T01:CDS
AGCTCGCCACAAAGGCCGCT+CGG	0.491073	4:-85070505	MsG0480023426.01.T01:CDS
GGCCGCTCGGAAATCAGCTC+CGG	0.498921	4:-85070492	MsG0480023426.01.T01:CDS
GTGTGGCTTCTTCACTCCTC+CGG	0.499925	4:+85070466	None:intergenic
CTTCCGGGGAGCCTTGCCGC+CGG	0.507682	4:+85070529	None:intergenic
GGACTTGCGAGCTGTTTGCT+TGG	0.512299	4:+85070553	None:intergenic
TCGCAAGTCCACCGGCGGCA+AGG	0.530180	4:-85070540	MsG0480023426.01.T01:CDS
CCGGGGAGCCTTGCCGCCGG+TGG	0.548377	4:+85070532	None:intergenic
CAAACAGCTCGCAAGTCCAC+CGG	0.573307	4:-85070548	MsG0480023426.01.T01:CDS
TTTGTGGCGAGCTGCTTCCG+GGG	0.576886	4:+85070515	None:intergenic
AAGAAGAATCAGAGGCGAGA+GGG	0.597241	4:-85070181	MsG0480023426.01.T01:CDS
TCACGAACAAGACGTTGGAA+TGG	0.598115	4:+85070365	None:intergenic
AAATCAGCTCCGGCGACCGG+AGG	0.599225	4:-85070482	MsG0480023426.01.T01:CDS
CCGGAAGCAGCTCGCCACAA+AGG	0.611340	4:-85070513	MsG0480023426.01.T01:CDS
CGATTTCACGAACAAGACGT+TGG	0.613448	4:+85070360	None:intergenic
GAGAGTTACAATCATGCCCA+AGG	0.637894	4:-85070217	MsG0480023426.01.T01:CDS
CAAGAAGAATCAGAGGCGAG+AGG	0.648850	4:-85070182	MsG0480023426.01.T01:CDS
ACAGCTCGCAAGTCCACCGG+CGG	0.655092	4:-85070545	MsG0480023426.01.T01:CDS
CAACTTGCAAGAAGAATCAG+AGG	0.655500	4:-85070189	MsG0480023426.01.T01:CDS
AAGCCACACAGATTCAGACC+TGG	0.672238	4:-85070452	MsG0480023426.01.T01:CDS
GTTCCAGGTCTGAATCTGTG+TGG	0.688220	4:+85070449	None:intergenic
CGCCGGAGCTGATTTCCGAG+CGG	0.728257	4:+85070490	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	CAACTTGCAAGAAGAATCAG+AGG	-	Chr4:85070516-85070535	MsG0480023426.01.T01:CDS	40.0%
	GACGTTGGAATGGAAGTTTA+CGG	+	Chr4:85070333-85070352	None:intergenic	40.0%
!	CTTGCAAGTTGAATGTCCTT+GGG	+	Chr4:85070507-85070526	None:intergenic	40.0%
!	TCTTGCAAGTTGAATGTCCT+TGG	+	Chr4:85070508-85070527	None:intergenic	40.0%
	AAGAAGAATCAGAGGCGAGA+GGG	-	Chr4:85070524-85070543	MsG0480023426.01.T01:CDS	45.0%
	CGATTTCACGAACAAGACGT+TGG	+	Chr4:85070348-85070367	None:intergenic	45.0%
	GAGAGTTACAATCATGCCCA+AGG	-	Chr4:85070488-85070507	MsG0480023426.01.T01:CDS	45.0%
	TCACGAACAAGACGTTGGAA+TGG	+	Chr4:85070343-85070362	None:intergenic	45.0%
	TCTCTCAAAGCAACTGTTCC+AGG	+	Chr4:85070274-85070293	None:intergenic	45.0%
	AAGCCACACAGATTCAGACC+TGG	-	Chr4:85070253-85070272	MsG0480023426.01.T01:CDS	50.0%
	CAAGAAGAATCAGAGGCGAG+AGG	-	Chr4:85070523-85070542	MsG0480023426.01.T01:CDS	50.0%
	CTTAGATTCCAGAGCAGTGC+TGG	-	Chr4:85070388-85070407	MsG0480023426.01.T01:CDS	50.0%
	GCAGCTGAAGCTTACTTGGT+TGG	-	Chr4:85070427-85070446	MsG0480023426.01.T01:CDS	50.0%
	GGAAGCAGCTGAAGCTTACT+TGG	-	Chr4:85070423-85070442	MsG0480023426.01.T01:CDS	50.0%
	GTTCCAGGTCTGAATCTGTG+TGG	+	Chr4:85070259-85070278	None:intergenic	50.0%
	CAAACAGCTCGCAAGTCCAC+CGG	-	Chr4:85070157-85070176	MsG0480023426.01.T01:CDS	55.0%
	GGACTTGCGAGCTGTTTGCT+TGG	+	Chr4:85070155-85070174	None:intergenic	55.0%
	GTGTGGCTTCTTCACTCCTC+CGG	+	Chr4:85070242-85070261	None:intergenic	55.0%
	TGATTTCCGAGCGGCCTTTG+TGG	+	Chr4:85070209-85070228	None:intergenic	55.0%
!!	CAGTGCTGGTTCTGCTCTTC+AGG	-	Chr4:85070402-85070421	MsG0480023426.01.T01:CDS	55.0%
	CCTTTGTGGCGAGCTGCTTC+CGG	+	Chr4:85070195-85070214	None:intergenic	60.0%
	CTTTGTGGCGAGCTGCTTCC+GGG	+	Chr4:85070194-85070213	None:intergenic	60.0%
	GAGCAGAACCAGCACTGCTC+TGG	+	Chr4:85070399-85070418	None:intergenic	60.0%
	TTCTTCACTCCTCCGGTCGC+CGG	+	Chr4:85070235-85070254	None:intergenic	60.0%
	TTTGTGGCGAGCTGCTTCCG+GGG	+	Chr4:85070193-85070212	None:intergenic	60.0%
	AAATCAGCTCCGGCGACCGG+AGG	-	Chr4:85070223-85070242	MsG0480023426.01.T01:CDS	65.0%
	ACAGCTCGCAAGTCCACCGG+CGG	-	Chr4:85070160-85070179	MsG0480023426.01.T01:CDS	65.0%
	AGCTCGCCACAAAGGCCGCT+CGG	-	Chr4:85070200-85070219	MsG0480023426.01.T01:CDS	65.0%
	CCGGAAGCAGCTCGCCACAA+AGG	-	Chr4:85070192-85070211	MsG0480023426.01.T01:CDS	65.0%
	CGGAAATCAGCTCCGGCGAC+CGG	-	Chr4:85070220-85070239	MsG0480023426.01.T01:CDS	65.0%
	GGCCGCTCGGAAATCAGCTC+CGG	-	Chr4:85070213-85070232	MsG0480023426.01.T01:CDS	65.0%
!	CGCCGGAGCTGATTTCCGAG+CGG	+	Chr4:85070218-85070237	None:intergenic	65.0%
	TCGCAAGTCCACCGGCGGCA+AGG	-	Chr4:85070165-85070184	MsG0480023426.01.T01:CDS	70.0%
	CTTCCGGGGAGCCTTGCCGC+CGG	+	Chr4:85070179-85070198	None:intergenic	75.0%
!	CCACCGGCGGCAAGGCTCCC+CGG	-	Chr4:85070173-85070192	MsG0480023426.01.T01:CDS	80.0%
!	CCGGGGAGCCTTGCCGCCGG+TGG	+	Chr4:85070176-85070195	None:intergenic	85.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	85070142	85070585	85070142	ID=MsG0480023426.01;Name=MsG0480023426.01
Chr4	mRNA	85070142	85070585	85070142	ID=MsG0480023426.01.T01;Parent=MsG0480023426.01;Name=MsG0480023426.01.T01;_AED=0.42;_eAED=0.42;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|147
Chr4	exon	85070142	85070585	85070142	ID=MsG0480023426.01.T01:exon:2816;Parent=MsG0480023426.01.T01
Chr4	CDS	85070142	85070585	85070142	ID=MsG0480023426.01.T01:cds;Parent=MsG0480023426.01.T01

Gene Sequence

>MsG0480023426.01.T01

ATGGCACGTACCAAGCAAACAGCTCGCAAGTCCACCGGCGGCAAGGCTCCCCGGAAGCAGCTCGCCACAAAGGCCGCTCGGAAATCAGCTCCGGCGACCGGAGGAGTGAAGAAGCCACACAGATTCAGACCTGGAACAGTTGCTTTGAGAGAGATTCGTAAGTATCAGAAGAGCACTGAGCTTCTCATCCGTAAACTTCCATTCCAACGTCTTGTTCGTGAAATCGCTCAAGATTTCAAGACAGATCTTAGATTCCAGAGCAGTGCTGGTTCTGCTCTTCAGGAAGCAGCTGAAGCTTACTTGGTTGGACTCTTTGAAGACACAAACTTTGTGCAATTCATGCTAAGAGAGTTACAATCATGCCCAAGGACATTCAACTTGCAAGAAGAATCAGAGGCGAGAGGGCTTAGTTTCAATTTCAATTCCCAATTTTCAATTTCGTAA

Protein sequence

>MsG0480023426.01.T01

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAGSALQEAAEAYLVGLFEDTNFVQFMLRELQSCPRTFNLQEESEARGLSFNFNSQFSIS*