AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015090.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015090.01.T01 MTR_3g063110 99.038 104 1 0 38 141 29 132 5.31e-70 208
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015090.01.T01 AT3G46940 91.346 104 9 0 38 141 86 189 1.28e-64 197
MsG0380015090.01.T01 AT3G46940 91.346 104 9 0 38 141 45 148 1.70e-64 195

Find 49 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTGAAGTTTCTGAGGTT+TGG 0.270793 3:+65057912 MsG0380015090.01.T01:CDS
GATTTGGATTCTACTGTTAG+AGG 0.343621 3:+65057934 MsG0380015090.01.T01:CDS
TGAAGGTGGTTTGGATCTAC+TGG 0.351476 3:+65057957 MsG0380015090.01.T01:CDS
AAGTTTCTGAGGTTTGGATT+TGG 0.363384 3:+65057918 MsG0380015090.01.T01:CDS
ACACGAGCATAGGTTCCTTC+AGG 0.369361 3:-65057636 None:intergenic
AACCTTTGAATCGGCGGCGC+TGG 0.374420 3:-65057565 None:intergenic
TGTTAGAGGTGAAGGTGGTT+TGG 0.409686 3:+65057948 MsG0380015090.01.T01:CDS
CTGATTACAGAGGACCTGTT+GGG 0.415838 3:+65057804 MsG0380015090.01.T01:CDS
CATTCGATTGACGTTGGTGC+TGG 0.432456 3:+65057770 MsG0380015090.01.T01:CDS
ATCCAAACCTCAGAAACTTC+AGG 0.437816 3:-65057914 None:intergenic
ATGAGAGCTTTGCCGCGAGC+AGG 0.461473 3:-65057588 None:intergenic
CGCCGAGATCGGGGTTGACA+TGG 0.473074 3:+65057744 MsG0380015090.01.T01:CDS
GGCTAAAGATGAAGCTCTAA+AGG 0.477089 3:+65055435 MsG0380015090.01.T01:CDS
TTCCATGTCAACCCCGATCT+CGG 0.481839 3:-65057746 None:intergenic
CAAAATGGTGAAAGCTCTGC+AGG 0.482204 3:+65055414 None:intergenic
TTAAACAGTATAACCCCAAC+AGG 0.497604 3:-65057818 None:intergenic
GGAAGGTATAACGGCTTTGT+CGG 0.505146 3:-65057509 None:intergenic
GATTCTACTGTTAGAGGTGA+AGG 0.505946 3:+65057940 MsG0380015090.01.T01:CDS
TGTCGGAGAGTTTCTTCACT+CGG 0.507441 3:-65057492 None:intergenic
CTCCAGCGCCGCCGATTCAA+AGG 0.509909 3:+65057563 MsG0380015090.01.T01:CDS
CTCTCCATCGCCGTCCCTGA+AGG 0.513836 3:+65057621 MsG0380015090.01.T01:CDS
GGCGCTGGAGAGATCGTATC+CGG 0.519854 3:-65057550 None:intergenic
GAGAGCGCGGGAAGGTATAA+CGG 0.522537 3:-65057518 None:intergenic
TATTACTCCTGAAGTTTCTG+AGG 0.531575 3:+65057907 MsG0380015090.01.T01:CDS
CACGAGCATAGGTTCCTTCA+GGG 0.535140 3:-65057635 None:intergenic
CCGCGCTCTCCTCTCTCCGC+CGG 0.537228 3:+65057531 MsG0380015090.01.T01:CDS
GCGAGCAGGAACCTTTGAAT+CGG 0.540643 3:-65057574 None:intergenic
GAAGGTGGTTTGGATCTACT+GGG 0.541527 3:+65057958 MsG0380015090.01.T01:CDS
ACGGCGATGGAGAGATCTGT+GGG 0.554559 3:-65057612 None:intergenic
GGTTCCTTCAGGGACGGCGA+TGG 0.559917 3:-65057625 None:intergenic
GGAAGCTGATGAAGATGTTG+AGG 0.569328 3:+65055456 MsG0380015090.01.T01:CDS
CCGGCGGAGAGAGGAGAGCG+CGG 0.571771 3:-65057531 None:intergenic
TCTACTGTTAGAGGTGAAGG+TGG 0.578300 3:+65057943 MsG0380015090.01.T01:CDS
GACGGCGATGGAGAGATCTG+TGG 0.578622 3:-65057613 None:intergenic
AGCAGGAACCTTTGAATCGG+CGG 0.581168 3:-65057571 None:intergenic
CGGCGGAGAGAGGAGAGCGC+GGG 0.581769 3:-65057530 None:intergenic
GTAATTACCAACACGAGCAT+AGG 0.588762 3:-65057646 None:intergenic
AGATCGTATCCGGCGGAGAG+AGG 0.592423 3:-65057540 None:intergenic
GAAGGAACCTATGCTCGTGT+TGG 0.606547 3:+65057639 MsG0380015090.01.T01:CDS
GGAGAGAGGAGAGCGCGGGA+AGG 0.607060 3:-65057526 None:intergenic
GCTGATTACAGAGGACCTGT+TGG 0.614644 3:+65057803 MsG0380015090.01.T01:CDS
TGGAAGCATTCGATTGACGT+TGG 0.614719 3:+65057764 MsG0380015090.01.T01:CDS
AAGGTGGTTTGGATCTACTG+GGG 0.628824 3:+65057959 MsG0380015090.01.T01:CDS
AGCATAGGTTCCTTCAGGGA+CGG 0.629807 3:-65057631 None:intergenic
GATTCAAAGGTTCCTGCTCG+CGG 0.632457 3:+65057576 MsG0380015090.01.T01:CDS
TGATTACAGAGGACCTGTTG+GGG 0.654205 3:+65057805 MsG0380015090.01.T01:CDS
GTGATTGATGCTGATTACAG+AGG 0.740502 3:+65057794 MsG0380015090.01.T01:CDS
GCTGGAGAGATCGTATCCGG+CGG 0.743244 3:-65057547 None:intergenic
CGGCGATGGAGAGATCTGTG+GGG 0.756952 3:-65057611 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTTAGTAATATTTTG+TGG + Chr3:65055917-65055936 MsG0380015090.01.T01:intron 10.0%
!!! ATTATTTAGTAATATTTTGT+GGG + Chr3:65055918-65055937 MsG0380015090.01.T01:intron 10.0%
!!! TTTAAGTATATTCAATTTTT+TGG - Chr3:65055739-65055758 None:intergenic 10.0%
!!! TTATTTAGTAATATTTTGTG+GGG + Chr3:65055919-65055938 MsG0380015090.01.T01:intron 15.0%
!! AAACAAATGATGTATCATTT+AGG + Chr3:65057083-65057102 MsG0380015090.01.T01:intron 20.0%
!! AAACCCTAAAATTCAAAATT+GGG - Chr3:65057685-65057704 None:intergenic 20.0%
!! AAATTTAGATTCATTGATCA+TGG - Chr3:65056601-65056620 None:intergenic 20.0%
!! AAATTTCTTAAGATGAACTT+TGG - Chr3:65056703-65056722 None:intergenic 20.0%
!! ATGTATTAGTAGAAGAATAT+GGG - Chr3:65056922-65056941 None:intergenic 20.0%
!! TAAAATTCAAAATTGGGAAA+GGG - Chr3:65057679-65057698 None:intergenic 20.0%
!! TATGTATTAGTAGAAGAATA+TGG - Chr3:65056923-65056942 None:intergenic 20.0%
!! TTTATATAGAAAGTGAGAAA+AGG - Chr3:65057363-65057382 None:intergenic 20.0%
!!! AATTTTAGGGTTTGAAATTT+AGG + Chr3:65057692-65057711 MsG0380015090.01.T01:intron 20.0%
!!! ATTTTAGGGTTTGAAATTTA+GGG + Chr3:65057693-65057712 MsG0380015090.01.T01:intron 20.0%
!!! ATTTTGAATTTGTTTGCAAA+AGG - Chr3:65056420-65056439 None:intergenic 20.0%
!!! ATTTTTTTCTTCTATTGATC+GGG - Chr3:65056312-65056331 None:intergenic 20.0%
!!! CATTTTTTTCTTCTATTGAT+CGG - Chr3:65056313-65056332 None:intergenic 20.0%
!!! TAAATTTGCAAAACGTTTTT+GGG + Chr3:65056614-65056633 MsG0380015090.01.T01:intron 20.0%
!!! TATTTAGTAATATTTTGTGG+GGG + Chr3:65055920-65055939 MsG0380015090.01.T01:intron 20.0%
!!! TTTCCCAATTTTGAATTTTA+GGG + Chr3:65057679-65057698 MsG0380015090.01.T01:intron 20.0%
! AAAATTCAAAATTGGGAAAG+GGG - Chr3:65057678-65057697 None:intergenic 25.0%
! AAATCTCTTGCAAATTTATG+TGG - Chr3:65056561-65056580 None:intergenic 25.0%
! AAATGATGAAGTAGTTATCT+TGG + Chr3:65056173-65056192 MsG0380015090.01.T01:intron 25.0%
! AAGAAGTAATTGGAAAAGAA+TGG + Chr3:65057299-65057318 MsG0380015090.01.T01:intron 25.0%
! AGTTATAGGAGAAAAAATCA+TGG - Chr3:65056538-65056557 None:intergenic 25.0%
! ATCCAGAAATATTGTTAAGT+GGG + Chr3:65055584-65055603 MsG0380015090.01.T01:intron 25.0%
! CAAACCCTAAAATTCAAAAT+TGG - Chr3:65057686-65057705 None:intergenic 25.0%
! CGATCAATAGAAGAAAAAAA+TGG + Chr3:65056311-65056330 MsG0380015090.01.T01:intron 25.0%
! CTAAAATTCAAAATTGGGAA+AGG - Chr3:65057680-65057699 None:intergenic 25.0%
! TAGATGATCAAAGACATTAA+AGG + Chr3:65057013-65057032 MsG0380015090.01.T01:intron 25.0%
! TGTATTAGTAGAAGAATATG+GGG - Chr3:65056921-65056940 None:intergenic 25.0%
!! CTAAATTTGCAAAACGTTTT+TGG + Chr3:65056613-65056632 MsG0380015090.01.T01:intron 25.0%
!! CTTTCCCAATTTTGAATTTT+AGG + Chr3:65057678-65057697 MsG0380015090.01.T01:intron 25.0%
!! GATTTGTCATTCTAGAAATT+AGG - Chr3:65056080-65056099 None:intergenic 25.0%
!! TTTTCACAGAAGTTTTCAAA+AGG - Chr3:65056503-65056522 None:intergenic 25.0%
!!! TTGAAAAGTGTTTTAACCAT+AGG - Chr3:65056214-65056233 None:intergenic 25.0%
AAAATCAGAAGTGATCATGA+TGG + Chr3:65056461-65056480 MsG0380015090.01.T01:intron 30.0%
ATGAAAGTAATAGAGCATGT+GGG + Chr3:65055991-65056010 MsG0380015090.01.T01:intron 30.0%
CATCAATTGGAAGAAGTAAT+TGG + Chr3:65057289-65057308 MsG0380015090.01.T01:intron 30.0%
GATCCAGAAATATTGTTAAG+TGG + Chr3:65055583-65055602 MsG0380015090.01.T01:intron 30.0%
GCAAATTTATGTGGAGTTAT+AGG - Chr3:65056552-65056571 None:intergenic 30.0%
TAGGATATTTGAATGCTCAA+AGG + Chr3:65056751-65056770 MsG0380015090.01.T01:intron 30.0%
TATGAAAGTAATAGAGCATG+TGG + Chr3:65055990-65056009 MsG0380015090.01.T01:intron 30.0%
TCAACAATGTCCAACTTAAA+CGG + Chr3:65057448-65057467 MsG0380015090.01.T01:intron 30.0%
TCCAGAAATATTGTTAAGTG+GGG + Chr3:65055585-65055604 MsG0380015090.01.T01:intron 30.0%
TCTTATGAACAATTCTTCGT+TGG + Chr3:65056856-65056875 MsG0380015090.01.T01:intron 30.0%
TGATAACATGTAAGATGTGT+TGG + Chr3:65056951-65056970 MsG0380015090.01.T01:intron 30.0%
! TCATTATTGATGACTTTAGC+AGG + Chr3:65056339-65056358 MsG0380015090.01.T01:intron 30.0%
!!! GGGGCAAATCTTATTTTTAA+TGG + Chr3:65055939-65055958 MsG0380015090.01.T01:intron 30.0%
!!! GTTGATTTTGAAGTGAAAGT+TGG + Chr3:65057851-65057870 MsG0380015090.01.T01:CDS 30.0%
!!! TGTTTTTTAGCTTACCTTCT+TGG - Chr3:65056102-65056121 None:intergenic 30.0%
AATCCAAGTAATTGGACTCA+AGG - Chr3:65056896-65056915 None:intergenic 35.0%
ACGGATACATGAACAACAAA+TGG - Chr3:65056028-65056047 None:intergenic 35.0%
AGAATTGCTTTCACTACAAG+AGG + Chr3:65055544-65055563 MsG0380015090.01.T01:intron 35.0%
AGTAGTTATCTTGGTACTCA+TGG + Chr3:65056182-65056201 MsG0380015090.01.T01:intron 35.0%
ATCCAAGTAATTGGACTCAA+GGG - Chr3:65056895-65056914 None:intergenic 35.0%
ATGGGGAAAATCCAAGTAAT+TGG - Chr3:65056904-65056923 None:intergenic 35.0%
CCAGAAATATTGTTAAGTGG+GGG + Chr3:65055586-65055605 MsG0380015090.01.T01:intron 35.0%
CGGATACATGAACAACAAAT+GGG - Chr3:65056027-65056046 None:intergenic 35.0%
CTAGAATGACAAATCCAAGA+AGG + Chr3:65056085-65056104 MsG0380015090.01.T01:intron 35.0%
GAAAACTTCTGTGAAAAGCA+TGG + Chr3:65056506-65056525 MsG0380015090.01.T01:intron 35.0%
GAGCATTCAAATATCCTAAG+AGG - Chr3:65056749-65056768 None:intergenic 35.0%
GATACATGAACAACAAATGG+GGG - Chr3:65056025-65056044 None:intergenic 35.0%
GATTTGGATTCTACTGTTAG+AGG + Chr3:65057934-65057953 MsG0380015090.01.T01:CDS 35.0%
GGATACATGAACAACAAATG+GGG - Chr3:65056026-65056045 None:intergenic 35.0%
GTAATTGGAAAAGAATGGAG+CGG + Chr3:65057304-65057323 MsG0380015090.01.T01:intron 35.0%
TAATTGGAAAAGAATGGAGC+GGG + Chr3:65057305-65057324 MsG0380015090.01.T01:intron 35.0%
TATGAACAATTCTTCGTTGG+TGG + Chr3:65056859-65056878 MsG0380015090.01.T01:intron 35.0%
TATTACTCCTGAAGTTTCTG+AGG + Chr3:65057907-65057926 MsG0380015090.01.T01:CDS 35.0%
TCTTCCTTCAACTCATCAAT+TGG + Chr3:65057276-65057295 MsG0380015090.01.T01:intron 35.0%
TGAAAGTAATAGAGCATGTG+GGG + Chr3:65055992-65056011 MsG0380015090.01.T01:intron 35.0%
TTAAACAGTATAACCCCAAC+AGG - Chr3:65057821-65057840 None:intergenic 35.0%
TTCTGCACATTGATCTCTTT+AGG + Chr3:65056272-65056291 MsG0380015090.01.T01:intron 35.0%
! TCTTCCAATTGATGAGTTGA+AGG - Chr3:65057283-65057302 None:intergenic 35.0%
! TTATTGATGACTTTAGCAGG+TGG + Chr3:65056342-65056361 MsG0380015090.01.T01:intron 35.0%
!! AAGTTTCTGAGGTTTGGATT+TGG + Chr3:65057918-65057937 MsG0380015090.01.T01:CDS 35.0%
AACCCTTGAGTCCAATTACT+TGG + Chr3:65056890-65056909 MsG0380015090.01.T01:intron 40.0%
AAGAATGGAGCGGGAAAATT+TGG + Chr3:65057314-65057333 MsG0380015090.01.T01:intron 40.0%
ATCCAAACCTCAGAAACTTC+AGG - Chr3:65057917-65057936 None:intergenic 40.0%
CCCCCACTTAACAATATTTC+TGG - Chr3:65055589-65055608 None:intergenic 40.0%
CGTTCGACGAAACTATTCTT+AGG - Chr3:65056824-65056843 None:intergenic 40.0%
GATTCTACTGTTAGAGGTGA+AGG + Chr3:65057940-65057959 MsG0380015090.01.T01:CDS 40.0%
GGTGAAATTCCTTAGAAGCA+AGG + Chr3:65056370-65056389 MsG0380015090.01.T01:intron 40.0%
GTAATTACCAACACGAGCAT+AGG - Chr3:65057649-65057668 None:intergenic 40.0%
TCAATGTGCAGAAGTTCCAA+TGG - Chr3:65056265-65056284 None:intergenic 40.0%
TGCTAGTTGTTTGAACTCTC+TGG - Chr3:65055511-65055530 None:intergenic 40.0%
TTTCTTCACTCGGAGAAAAC+TGG - Chr3:65057485-65057504 None:intergenic 40.0%
! GATGAAGATGTTGAGGTATC+TGG + Chr3:65055463-65055482 MsG0380015090.01.T01:intron 40.0%
! GGCTAAAGATGAAGCTCTAA+AGG + Chr3:65055435-65055454 MsG0380015090.01.T01:CDS 40.0%
! GTGATTGATGCTGATTACAG+AGG + Chr3:65057794-65057813 MsG0380015090.01.T01:CDS 40.0%
!! GAATCAGCTTTGAAATGACC+AGG - Chr3:65056056-65056075 None:intergenic 40.0%
!! TTGATCGGGTTAGTATTCAC+TGG - Chr3:65056298-65056317 None:intergenic 40.0%
AAGACTCGTCCTTGCTTCTA+AGG - Chr3:65056382-65056401 None:intergenic 45.0%
AGAAGAGTCTCATGGCTACA+CGG + Chr3:65056128-65056147 MsG0380015090.01.T01:intron 45.0%
CAAAGCGAAGAAGAGTCTCA+TGG + Chr3:65056120-65056139 MsG0380015090.01.T01:intron 45.0%
CTGATTACAGAGGACCTGTT+GGG + Chr3:65057804-65057823 MsG0380015090.01.T01:CDS 45.0%
GGAAGCTGATGAAGATGTTG+AGG + Chr3:65055456-65055475 MsG0380015090.01.T01:CDS 45.0%
GTACTCATGGCAACATCCTA+TGG + Chr3:65056195-65056214 MsG0380015090.01.T01:intron 45.0%
TCTACTGTTAGAGGTGAAGG+TGG + Chr3:65057943-65057962 MsG0380015090.01.T01:CDS 45.0%
TGAAACGACGCCGTTTAAGT+TGG - Chr3:65057461-65057480 None:intergenic 45.0%
TGATTACAGAGGACCTGTTG+GGG + Chr3:65057805-65057824 MsG0380015090.01.T01:CDS 45.0%
TGTCGGAGAGTTTCTTCACT+CGG - Chr3:65057495-65057514 None:intergenic 45.0%
TGTTAGAGGTGAAGGTGGTT+TGG + Chr3:65057948-65057967 MsG0380015090.01.T01:CDS 45.0%
! AAGCAAGGACGAGTCTTATG+AGG + Chr3:65056385-65056404 MsG0380015090.01.T01:intron 45.0%
! AAGGTGGTTTGGATCTACTG+GGG + Chr3:65057959-65057978 MsG0380015090.01.T01:CDS 45.0%
! GAAGATGTTGAGGTATCTGG+TGG + Chr3:65055466-65055485 MsG0380015090.01.T01:intron 45.0%
! GAAGGTGGTTTGGATCTACT+GGG + Chr3:65057958-65057977 MsG0380015090.01.T01:CDS 45.0%
! GAGGATACGCTTTTGAGCTT+TGG - Chr3:65056730-65056749 None:intergenic 45.0%
! GCTCAAAAGCGTATCCTCTT+AGG + Chr3:65056732-65056751 MsG0380015090.01.T01:intron 45.0%
! GGAAGGTATAACGGCTTTGT+CGG - Chr3:65057512-65057531 None:intergenic 45.0%
! TGAAGGTGGTTTGGATCTAC+TGG + Chr3:65057957-65057976 MsG0380015090.01.T01:CDS 45.0%
! TGACTTTAGCAGGTGGACTT+AGG + Chr3:65056349-65056368 MsG0380015090.01.T01:intron 45.0%
! TGTTTCTACCTCCAGACCAT+TGG + Chr3:65056246-65056265 MsG0380015090.01.T01:intron 45.0%
!! CTCCTGAAGTTTCTGAGGTT+TGG + Chr3:65057912-65057931 MsG0380015090.01.T01:CDS 45.0%
!! TGGAAGCATTCGATTGACGT+TGG + Chr3:65057764-65057783 MsG0380015090.01.T01:CDS 45.0%
ACACGAGCATAGGTTCCTTC+AGG - Chr3:65057639-65057658 None:intergenic 50.0%
AGCAGGAACCTTTGAATCGG+CGG - Chr3:65057574-65057593 None:intergenic 50.0%
AGCATAGGTTCCTTCAGGGA+CGG - Chr3:65057634-65057653 None:intergenic 50.0%
CACGAGCATAGGTTCCTTCA+GGG - Chr3:65057638-65057657 None:intergenic 50.0%
CAGAAGTTCCAATGGTCTGG+AGG - Chr3:65056257-65056276 None:intergenic 50.0%
CATTCGATTGACGTTGGTGC+TGG + Chr3:65057770-65057789 MsG0380015090.01.T01:CDS 50.0%
GAAGAGTCTCATGGCTACAC+GGG + Chr3:65056129-65056148 MsG0380015090.01.T01:intron 50.0%
GAAGGAACCTATGCTCGTGT+TGG + Chr3:65057639-65057658 MsG0380015090.01.T01:CDS 50.0%
GATTCAAAGGTTCCTGCTCG+CGG + Chr3:65057576-65057595 MsG0380015090.01.T01:CDS 50.0%
GCGAGCAGGAACCTTTGAAT+CGG - Chr3:65057577-65057596 None:intergenic 50.0%
GCTGATTACAGAGGACCTGT+TGG + Chr3:65057803-65057822 MsG0380015090.01.T01:CDS 50.0%
GTGCAGAAGTTCCAATGGTC+TGG - Chr3:65056260-65056279 None:intergenic 50.0%
TGCTTTCACTACAAGAGGCC+TGG + Chr3:65055549-65055568 MsG0380015090.01.T01:intron 50.0%
TTCCATGTCAACCCCGATCT+CGG - Chr3:65057749-65057768 None:intergenic 50.0%
TTGAAATGACCAGGCAGGCA+CGG - Chr3:65056047-65056066 None:intergenic 50.0%
! GGAGTGTGAGAGTGTGTTCA+TGG - Chr3:65057342-65057361 None:intergenic 50.0%
!! ATTTTTGCAGCGCCGAGATC+GGG + Chr3:65057734-65057753 MsG0380015090.01.T01:intron 50.0%
!! CAGCTTTGAAATGACCAGGC+AGG - Chr3:65056052-65056071 None:intergenic 50.0%
!! GATTTTTGCAGCGCCGAGAT+CGG + Chr3:65057733-65057752 MsG0380015090.01.T01:intron 50.0%
AAGAGGCCTGGTCACAAGGA+CGG + Chr3:65055561-65055580 MsG0380015090.01.T01:intron 55.0%
ACGGCGATGGAGAGATCTGT+GGG - Chr3:65057615-65057634 None:intergenic 55.0%
CTACAAGAGGCCTGGTCACA+AGG + Chr3:65055557-65055576 MsG0380015090.01.T01:intron 55.0%
TTCATGTATCCGTGCCTGCC+TGG + Chr3:65056035-65056054 MsG0380015090.01.T01:intron 55.0%
! GAGAGCGCGGGAAGGTATAA+CGG - Chr3:65057521-65057540 None:intergenic 55.0%
!! TTTTTGCAGCGCCGAGATCG+GGG + Chr3:65057735-65057754 MsG0380015090.01.T01:intron 55.0%
AACCTTTGAATCGGCGGCGC+TGG - Chr3:65057568-65057587 None:intergenic 60.0%
AGATCGTATCCGGCGGAGAG+AGG - Chr3:65057543-65057562 None:intergenic 60.0%
ATGAGAGCTTTGCCGCGAGC+AGG - Chr3:65057591-65057610 None:intergenic 60.0%
CGGCGATGGAGAGATCTGTG+GGG - Chr3:65057614-65057633 None:intergenic 60.0%
CTGGATCCGTCCTTGTGACC+AGG - Chr3:65055570-65055589 None:intergenic 60.0%
GACGGCGATGGAGAGATCTG+TGG - Chr3:65057616-65057635 None:intergenic 60.0%
GCTGGAGAGATCGTATCCGG+CGG - Chr3:65057550-65057569 None:intergenic 60.0%
! GGCGCTGGAGAGATCGTATC+CGG - Chr3:65057553-65057572 None:intergenic 60.0%
CGCCGAGATCGGGGTTGACA+TGG + Chr3:65057744-65057763 MsG0380015090.01.T01:CDS 65.0%
CTCTCCATCGCCGTCCCTGA+AGG + Chr3:65057621-65057640 MsG0380015090.01.T01:CDS 65.0%
GGTTCCTTCAGGGACGGCGA+TGG - Chr3:65057628-65057647 None:intergenic 65.0%
!! CTCCAGCGCCGCCGATTCAA+AGG + Chr3:65057563-65057582 MsG0380015090.01.T01:CDS 65.0%
! GGAGAGAGGAGAGCGCGGGA+AGG - Chr3:65057529-65057548 None:intergenic 70.0%
CCGCGCTCTCCTCTCTCCGC+CGG + Chr3:65057531-65057550 MsG0380015090.01.T01:CDS 75.0%
CCGGCGGAGAGAGGAGAGCG+CGG - Chr3:65057534-65057553 None:intergenic 75.0%
! CGGCGGAGAGAGGAGAGCGC+GGG - Chr3:65057533-65057552 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 65055418 65057997 65055418 ID=MsG0380015090.01;Name=MsG0380015090.01
Chr3 mRNA 65055418 65057997 65055418 ID=MsG0380015090.01.T01;Parent=MsG0380015090.01;Name=MsG0380015090.01.T01;_AED=0.33;_eAED=0.43;_QI=0|0|0|0.66|1|1|3|0|162
Chr3 exon 65055418 65055477 65055418 ID=MsG0380015090.01.T01:exon:9940;Parent=MsG0380015090.01.T01
Chr3 exon 65057486 65057660 65057486 ID=MsG0380015090.01.T01:exon:9941;Parent=MsG0380015090.01.T01
Chr3 exon 65057744 65057997 65057744 ID=MsG0380015090.01.T01:exon:9942;Parent=MsG0380015090.01.T01
Chr3 CDS 65055418 65055477 65055418 ID=MsG0380015090.01.T01:cds;Parent=MsG0380015090.01.T01
Chr3 CDS 65057486 65057660 65057486 ID=MsG0380015090.01.T01:cds;Parent=MsG0380015090.01.T01
Chr3 CDS 65057744 65057997 65057744 ID=MsG0380015090.01.T01:cds;Parent=MsG0380015090.01.T01
Gene Sequence

>MsG0380015090.01.T01

ATGGTGAAAGCTCTGCAGGCTAAAGATGAAGCTCTAAAGGAAGCTGATGAAGATGTTGAGTTTTCTCCGAGTGAAGAAACTCTCCGACAAAGCCGTTATACCTTCCCGCGCTCTCCTCTCTCCGCCGGATACGATCTCTCCAGCGCCGCCGATTCAAAGGTTCCTGCTCGCGGCAAAGCTCTCATCCCCACAGATCTCTCCATCGCCGTCCCTGAAGGAACCTATGCTCGTGTTGCGCCGAGATCGGGGTTGACATGGAAGCATTCGATTGACGTTGGTGCTGGAGTGATTGATGCTGATTACAGAGGACCTGTTGGGGTTATACTGTTTAATCATTCAGATGTTGATTTTGAAGTGAAAGTTGGTGATAGAGTTGCTCAGTTGATTATTGAGAAGATTATTACTCCTGAAGTTTCTGAGGTTTGGATTTGGATTCTACTGTTAGAGGTGAAGGTGGTTTGGATCTACTGGGGTTTGAGTTTGAGTTAG

Protein sequence

>MsG0380015090.01.T01

MVKALQAKDEALKEADEDVEFSPSEETLRQSRYTFPRSPLSAGYDLSSAADSKVPARGKALIPTDLSIAVPEGTYARVAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKVGDRVAQLIIEKIITPEVSEVWIWILLLEVKVVWIYWGLSLS*