AlfalfaGEDB | MsG0780041273.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041273.01

KEGG: K11251
GO: GO:0000786 GO:0003677 GO:0005634 GO:0046982
PFAM: PF00125 PF16211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041273.01.T01	XP_003625881.1	80.822	146	19	2	1	141	1	142	2.29E-69	215

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041273.01.T01	O65759	96.117	103	4	0	39	141	37	139	2.46E-66	200

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041273.01.T01	G7KRS8	80.822	146	19	2	1	141	1	142	1.09e-69	215

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0780041273.01	0.867511	1.297029e-65	4.539961e-62
MsG0080048258.01	MsG0780041273.01	0.832674	8.261581e-56	9.299420e-53
MsG0080048775.01	MsG0780041273.01	0.831468	1.641302e-55	1.782763e-52
MsG0080048797.01	MsG0780041273.01	0.854893	9.083739e-62	2.059406e-58
MsG0180001293.01	MsG0780041273.01	0.861131	1.272926e-63	3.563644e-60
MsG0180001588.01	MsG0780041273.01	0.820654	6.119284e-53	4.870526e-50
MsG0180001719.01	MsG0780041273.01	0.845594	3.684483e-59	6.170661e-56
MsG0180002134.01	MsG0780041273.01	0.848890	4.592574e-60	8.552851e-57
MsG0180002217.01	MsG0780041273.01	0.830125	3.502968e-55	3.657321e-52
MsG0180002218.01	MsG0780041273.01	0.870583	1.307980e-66	5.114169e-63
MsG0180002397.01	MsG0780041273.01	0.852880	3.451665e-61	7.318177e-58
MsG0180002428.01	MsG0780041273.01	0.818921	1.523167e-52	1.155573e-49
MsG0180002583.01	MsG0780041273.01	0.819159	1.344538e-52	1.026630e-49
MsG0180003698.01	MsG0780041273.01	0.830436	2.940375e-55	3.097645e-52
MsG0180003857.01	MsG0780041273.01	0.858846	6.224175e-63	1.610740e-59
MsG0180003905.01	MsG0780041273.01	0.808881	2.491184e-50	1.440947e-47
MsG0180004120.01	MsG0780041273.01	0.911148	8.440138e-83	1.783876e-78
MsG0180004185.01	MsG0780041273.01	0.858724	6.767192e-63	1.743937e-59
MsG0180004299.01	MsG0780041273.01	0.862777	3.984890e-64	1.181011e-60
MsG0180004471.01	MsG0780041273.01	0.827339	1.652233e-54	1.590676e-51
MsG0180004538.01	MsG0780041273.01	0.888755	4.456490e-73	3.496816e-69
MsG0180004583.01	MsG0780041273.01	0.906633	1.204060e-80	2.058010e-76
MsG0180004835.01	MsG0780041273.01	0.838697	2.466031e-57	3.329254e-54
MsG0180004994.01	MsG0780041273.01	0.856226	3.713087e-62	8.799649e-59
MsG0180004995.01	MsG0780041273.01	0.870359	1.548725e-66	6.006731e-63
MsG0180005048.01	MsG0780041273.01	0.901254	3.226122e-78	4.322441e-74
MsG0180005655.01	MsG0780041273.01	0.835127	2.010440e-56	2.435436e-53
MsG0180006006.01	MsG0780041273.01	0.809488	1.845574e-50	1.085030e-47
MsG0180006062.01	MsG0780041273.01	0.835117	2.022107e-56	2.448862e-53
MsG0180006133.01	MsG0780041273.01	0.892890	1.045086e-74	9.734042e-71
MsG0280006378.01	MsG0780041273.01	0.808132	3.599329e-50	2.041489e-47
MsG0780040364.01	MsG0780041273.01	0.815074	1.113767e-51	7.602373e-49
MsG0780040474.01	MsG0780041273.01	0.831696	1.441894e-55	1.576842e-52
MsG0780040554.01	MsG0780041273.01	0.814446	1.534376e-51	1.029781e-48
MsG0780040620.01	MsG0780041273.01	0.899412	2.034372e-77	2.513078e-73
MsG0780040641.01	MsG0780041273.01	0.889689	1.934900e-73	1.577311e-69
MsG0780040671.01	MsG0780041273.01	0.809093	2.243012e-50	1.304894e-47
MsG0780040899.01	MsG0780041273.01	0.864718	9.940691e-65	3.152075e-61
MsG0780041008.01	MsG0780041273.01	0.844014	9.827740e-59	1.565747e-55
MsG0780041142.01	MsG0780041273.01	0.809688	1.672409e-50	9.884857e-48
MsG0780041219.01	MsG0780041273.01	0.801365	9.320466e-49	4.443000e-46
MsG0780041232.01	MsG0780041273.01	0.820282	7.448206e-53	5.867998e-50
MsG0780041273.01	MsG0780041359.01	0.888150	7.617882e-73	5.831180e-69
MsG0780041273.01	MsG0780041546.01	0.855893	4.646854e-62	1.089150e-58
MsG0780041273.01	MsG0880043684.01	0.808623	2.827786e-50	1.624601e-47
MsG0780041273.01	MsG0880043714.01	0.802241	6.158429e-49	3.001626e-46
MsG0780041273.01	MsG0880043752.01	0.813321	2.715641e-51	1.767814e-48
MsG0780041273.01	MsG0880044103.01	0.819466	1.144214e-52	8.812423e-50
MsG0780041273.01	MsG0880044437.01	0.843728	1.172052e-58	1.850584e-55
MsG0780041273.01	MsG0880045015.01	0.905131	5.931005e-80	9.462487e-76
MsG0780041273.01	MsG0880045356.01	0.813987	1.937617e-51	1.284279e-48
MsG0780041273.01	MsG0880045612.01	0.853974	1.675629e-61	3.685818e-58
MsG0780041273.01	MsG0880045647.01	0.888229	7.106143e-73	5.457901e-69
MsG0780041273.01	MsG0880045879.01	0.838131	3.450039e-57	4.577585e-54
MsG0780041273.01	MsG0880045989.01	0.803116	4.065126e-49	2.025922e-46
MsG0780041273.01	MsG0880046529.01	0.850603	1.525934e-60	3.005089e-57
MsG0780041273.01	MsG0880046904.01	0.886385	3.582384e-72	2.553556e-68
MsG0780041273.01	MsG0880046905.01	0.899507	1.850814e-77	2.295964e-73
MsG0780041273.01	MsG0880046906.01	0.802142	6.453961e-49	3.137702e-46
MsG0780041273.01	MsG0880046993.01	0.801065	1.073300e-48	5.077962e-46
MsG0780041273.01	MsG0880047649.01	0.867214	1.613818e-65	5.589498e-62
MsG0280011083.01	MsG0780041273.01	0.802580	5.244574e-49	2.578295e-46
MsG0380012118.01	MsG0780041273.01	0.811821	5.779798e-51	3.614085e-48
MsG0380012956.01	MsG0780041273.01	0.860444	2.056794e-63	5.623630e-60
MsG0380013584.01	MsG0780041273.01	0.806157	9.429048e-50	5.081389e-47
MsG0380014542.01	MsG0780041273.01	0.896256	4.390278e-76	4.713346e-72
MsG0380014544.01	MsG0780041273.01	0.835087	2.058182e-56	2.490192e-53
MsG0380014666.01	MsG0780041273.01	0.911731	4.362400e-83	9.477436e-79
MsG0680031356.01	MsG0780041273.01	0.817897	2.598640e-52	1.916402e-49
MsG0680035350.01	MsG0780041273.01	0.806407	8.352499e-50	4.529771e-47
MsG0480018785.01	MsG0780041273.01	0.860710	1.707943e-63	4.712819e-60
MsG0480019601.01	MsG0780041273.01	0.823111	1.651803e-53	1.409237e-50
MsG0480020366.01	MsG0780041273.01	0.821437	4.040244e-53	3.286850e-50
MsG0480020398.01	MsG0780041273.01	0.895211	1.188421e-75	1.221162e-71
MsG0480020856.01	MsG0780041273.01	0.851341	9.455735e-61	1.908047e-57
MsG0480020920.01	MsG0780041273.01	0.849317	3.493889e-60	6.598206e-57
MsG0480020921.01	MsG0780041273.01	0.916342	1.999426e-85	5.472081e-81
MsG0480020926.01	MsG0780041273.01	0.935959	3.722826e-97	3.087945e-92
MsG0480020937.01	MsG0780041273.01	0.872610	2.786381e-67	1.173286e-63
MsG0480020969.01	MsG0780041273.01	0.827949	1.179020e-54	1.155334e-51
MsG0480020970.01	MsG0780041273.01	0.903988	1.961989e-79	2.972354e-75
MsG0480020971.01	MsG0780041273.01	0.836580	8.608053e-57	1.089342e-53
MsG0480021015.01	MsG0780041273.01	0.880095	7.279555e-70	4.048960e-66
MsG0480021016.01	MsG0780041273.01	0.832966	6.992280e-56	7.939512e-53
MsG0480021048.01	MsG0780041273.01	0.880134	7.049883e-70	3.926740e-66
MsG0480021100.01	MsG0780041273.01	0.906895	9.095466e-81	1.573171e-76
MsG0480021301.01	MsG0780041273.01	0.939007	2.615716e-99	2.619675e-94
MsG0480021302.01	MsG0780041273.01	0.810981	8.797107e-51	5.380827e-48
MsG0480021456.01	MsG0780041273.01	0.838192	3.328693e-57	4.424777e-54
MsG0480021704.01	MsG0780041273.01	0.853193	2.808523e-61	6.018810e-58
MsG0480021773.01	MsG0780041273.01	0.888704	4.662859e-73	3.651037e-69
MsG0480021902.01	MsG0780041273.01	0.899512	1.841136e-77	2.284584e-73
MsG0480022307.01	MsG0780041273.01	0.938188	1.015529e-98	9.622087e-94
MsG0480022320.01	MsG0780041273.01	0.829737	4.352939e-55	4.494844e-52
MsG0480022378.01	MsG0780041273.01	0.861421	1.038474e-63	2.937055e-60
MsG0480022682.01	MsG0780041273.01	0.809349	1.977665e-50	1.158438e-47
MsG0480022784.01	MsG0780041273.01	0.877997	4.008805e-69	2.058365e-65
MsG0480022991.01	MsG0780041273.01	0.849862	2.462622e-60	4.733525e-57
MsG0480023003.01	MsG0780041273.01	0.873432	1.477132e-67	6.409372e-64
MsG0480023414.01	MsG0780041273.01	0.844554	7.035602e-59	1.140052e-55
MsG0480023424.01	MsG0780041273.01	0.907905	3.056501e-81	5.536767e-77
MsG0480023426.01	MsG0780041273.01	0.939908	5.755350e-100	6.092564e-95
MsG0480023428.01	MsG0780041273.01	0.850067	2.158027e-60	4.176305e-57
MsG0480023626.01	MsG0780041273.01	0.822199	2.692053e-53	2.237815e-50
MsG0480023653.01	MsG0780041273.01	0.858366	8.656246e-63	2.203854e-59
MsG0480023679.01	MsG0780041273.01	0.835033	2.123870e-56	2.565627e-53
MsG0480023706.01	MsG0780041273.01	0.871631	5.896930e-67	2.395659e-63
MsG0480023842.01	MsG0780041273.01	0.900629	6.051244e-78	7.892792e-74
MsG0480023913.01	MsG0780041273.01	0.823930	1.062256e-53	9.274770e-51
MsG0480024002.01	MsG0780041273.01	0.823926	1.064762e-53	9.295488e-51
MsG0480024019.01	MsG0780041273.01	0.863431	2.502538e-64	7.583789e-61
MsG0580024158.01	MsG0780041273.01	0.823425	1.394527e-53	1.200209e-50
MsG0580024276.01	MsG0780041273.01	0.890464	9.625442e-74	8.099210e-70
MsG0580024742.01	MsG0780041273.01	0.832536	8.936832e-56	1.001841e-52
MsG0580024787.01	MsG0780041273.01	0.859942	2.917413e-63	7.840053e-60
MsG0580024954.01	MsG0780041273.01	0.825736	3.985002e-54	3.663282e-51
MsG0580025177.01	MsG0780041273.01	0.846662	1.886950e-59	3.271707e-56
MsG0580025186.01	MsG0780041273.01	0.831662	1.469891e-55	1.605783e-52
MsG0580025203.01	MsG0780041273.01	0.850024	2.218426e-60	4.287236e-57
MsG0580025504.01	MsG0780041273.01	0.929600	5.509131e-93	3.107583e-88
MsG0580025506.01	MsG0780041273.01	0.873787	1.121899e-67	4.929567e-64
MsG0380015090.01	MsG0780041273.01	0.857521	1.542977e-62	3.819032e-59
MsG0380015219.01	MsG0780041273.01	0.845315	4.383812e-59	7.277015e-56
MsG0380015340.01	MsG0780041273.01	0.899154	2.624341e-77	3.203856e-73
MsG0380015394.01	MsG0780041273.01	0.825230	5.251151e-54	4.758199e-51
MsG0380015402.01	MsG0780041273.01	0.813399	2.610831e-51	1.703211e-48
MsG0380015954.01	MsG0780041273.01	0.835334	1.783122e-56	2.173875e-53
MsG0380016027.01	MsG0780041273.01	0.861300	1.130222e-63	3.183576e-60
MsG0380016091.01	MsG0780041273.01	0.826174	3.134812e-54	2.917947e-51
MsG0380016092.01	MsG0780041273.01	0.810493	1.121359e-50	6.769315e-48
MsG0380016165.01	MsG0780041273.01	0.828685	7.836502e-55	7.845162e-52
MsG0380016217.01	MsG0780041273.01	0.821997	2.997450e-53	2.477495e-50
MsG0380016225.01	MsG0780041273.01	0.861318	1.115923e-63	3.144978e-60
MsG0380017128.01	MsG0780041273.01	0.837428	5.227900e-57	6.788860e-54
MsG0380017150.01	MsG0780041273.01	0.809403	1.925464e-50	1.129467e-47
MsG0380017181.01	MsG0780041273.01	0.839927	1.182326e-57	1.657660e-54
MsG0380017282.01	MsG0780041273.01	0.830998	2.140890e-55	2.293156e-52
MsG0380017332.01	MsG0780041273.01	0.855204	7.378635e-62	1.690134e-58
MsG0380017440.01	MsG0780041273.01	0.829983	3.793738e-55	3.944874e-52
MsG0380017588.01	MsG0780041273.01	0.816410	5.610549e-52	3.972382e-49
MsG0380017605.01	MsG0780041273.01	0.858903	5.983508e-63	1.551405e-59
MsG0380017632.01	MsG0780041273.01	0.840544	8.156359e-58	1.165660e-54
MsG0380017696.01	MsG0780041273.01	0.860971	1.423371e-63	3.962598e-60
MsG0380017932.01	MsG0780041273.01	0.844782	6.109645e-59	9.971300e-56
MsG0380018055.01	MsG0780041273.01	0.850396	1.744237e-60	3.412170e-57
MsG0480018106.01	MsG0780041273.01	0.822260	2.605674e-53	2.169929e-50
MsG0480018228.01	MsG0780041273.01	0.876975	9.100973e-69	4.500128e-65
MsG0580026343.01	MsG0780041273.01	0.809866	1.530967e-50	9.091292e-48
MsG0580028927.01	MsG0780041273.01	0.879685	1.018073e-69	5.571458e-66
MsG0580028955.01	MsG0780041273.01	0.929174	1.013552e-92	5.580264e-88
MsG0580029591.01	MsG0780041273.01	0.859461	4.070947e-63	1.076015e-59
MsG0280006563.01	MsG0780041273.01	0.834099	3.646318e-56	4.283311e-53
MsG0280007919.01	MsG0780041273.01	0.898082	7.513248e-77	8.745934e-73
MsG0280009216.01	MsG0780041273.01	0.813219	2.859430e-51	1.856103e-48
MsG0680035776.01	MsG0780041273.01	0.839851	1.236952e-57	1.730119e-54
MsG0680035792.01	MsG0780041273.01	0.868045	8.738781e-66	3.116666e-62
MsG0780036534.01	MsG0780041273.01	0.876061	1.883074e-68	9.001240e-65
MsG0780037741.01	MsG0780041273.01	0.825083	5.686038e-54	5.130957e-51
MsG0780038402.01	MsG0780041273.01	0.811181	7.960345e-51	4.894233e-48
MsG0780038642.01	MsG0780041273.01	0.844832	5.920704e-59	9.678062e-56
MsG0780038736.01	MsG0780041273.01	0.890430	9.922968e-74	8.339502e-70
MsG0780039536.01	MsG0780041273.01	0.817166	3.796886e-52	2.744571e-49
MsG0780039861.01	MsG0780041273.01	0.833425	5.374142e-56	6.186588e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041273.01.T01	MTR_7g108320	80.822	146	19	2	1	141	1	142	2.77e-73	215
MsG0780041273.01.T01	MTR_7g114060	78.322	143	25	2	1	141	1	139	5.28e-68	202
MsG0780041273.01.T01	MTR_7g114040	78.322	143	25	2	1	141	1	139	5.28e-68	202
MsG0780041273.01.T01	MTR_7g093910	85.437	103	15	0	39	141	40	142	3.50e-60	182
MsG0780041273.01.T01	MTR_2g082220	82.075	106	15	1	26	131	25	126	1.80e-53	165
MsG0780041273.01.T01	MTR_2g082510	83.495	103	13	1	26	128	25	123	2.41e-53	165
MsG0780041273.01.T01	MTR_7g114050	80.172	116	8	3	26	141	30	130	1.74e-52	162
MsG0780041273.01.T01	MTR_2g096610	80.682	88	17	0	39	126	40	127	7.67e-46	146
MsG0780041273.01.T01	MTR_2g096570	80.682	88	17	0	39	126	41	128	1.09e-45	146
MsG0780041273.01.T01	MTR_4g064005	80.682	88	17	0	39	126	42	129	1.80e-45	145
MsG0780041273.01.T01	MTR_4g063410	78.652	89	19	0	39	127	42	130	1.90e-45	145
MsG0780041273.01.T01	MTR_8g086640	80.682	88	17	0	39	126	42	129	2.06e-45	145
MsG0780041273.01.T01	MTR_4g071150	79.775	89	18	0	39	127	42	130	2.08e-45	145
MsG0780041273.01.T01	MTR_4g064967	80.682	88	17	0	39	126	42	129	3.95e-45	144
MsG0780041273.01.T01	MTR_4g063280	78.022	91	20	0	39	129	36	126	5.00e-45	144
MsG0780041273.01.T01	MTR_7g113160	75.281	89	22	0	39	127	44	132	1.19e-43	140
MsG0780041273.01.T01	MTR_4g063300	67.708	96	23	1	42	129	10	105	2.67e-36	121
MsG0780041273.01.T01	MTR_1g011750	49.630	135	53	5	1	125	1	130	5.37e-30	105
MsG0780041273.01.T01	MTR_1g011850	49.630	135	53	5	1	125	1	130	5.37e-30	105
MsG0780041273.01.T01	MTR_6g005150	58.333	96	31	2	39	133	44	131	1.24e-28	102
MsG0780041273.01.T01	MTR_1g071040	54.000	100	42	2	26	125	35	130	2.81e-28	101
MsG0780041273.01.T01	MTR_1g114050	46.565	131	60	4	1	125	1	127	4.35e-28	100
MsG0780041273.01.T01	MTR_4g005910	88.889	45	5	0	84	128	4	48	1.49e-22	84.7
MsG0780041273.01.T01	MTR_7g010440	68.182	66	21	0	75	140	122	187	4.41e-22	89.4
MsG0780041273.01.T01	MTR_1g069770	55.224	67	30	0	64	130	32	98	4.01e-19	77.4
MsG0780041273.01.T01	MTR_4g048490	57.576	66	27	1	62	127	39	103	1.45e-18	75.9
MsG0780041273.01.T01	MTR_0653s0030	52.830	53	25	0	52	104	43	95	5.89e-12	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041273.01.T01	AT1G54690	73.973	146	29	2	1	141	1	142	1.45e-65	196
MsG0780041273.01.T01	AT1G08880	72.603	146	31	2	1	141	1	142	9.84e-65	194
MsG0780041273.01.T01	AT4G27230	82.075	106	15	1	26	131	25	126	7.67e-54	166
MsG0780041273.01.T01	AT4G27230	82.075	106	15	1	26	131	25	126	7.67e-54	166
MsG0780041273.01.T01	AT5G54640	82.075	106	15	1	26	131	25	126	1.51e-53	165
MsG0780041273.01.T01	AT1G51060	81.132	106	16	1	26	131	25	126	5.15e-53	164
MsG0780041273.01.T01	AT3G20670	80.189	106	17	1	26	131	25	126	5.47e-52	161
MsG0780041273.01.T01	AT5G59870	71.287	101	25	1	26	126	33	129	9.97e-45	144
MsG0780041273.01.T01	AT5G02560	78.409	88	19	0	39	126	42	129	2.17e-44	143
MsG0780041273.01.T01	AT5G27670	77.273	88	20	0	39	126	43	130	6.82e-43	139
MsG0780041273.01.T01	AT5G02560	61.607	112	19	1	39	126	42	153	3.66e-39	130
MsG0780041273.01.T01	AT1G52740	56.436	101	38	3	26	125	35	130	1.02e-27	100
MsG0780041273.01.T01	AT2G38810	62.338	77	28	1	49	125	57	132	2.29e-27	99.4
MsG0780041273.01.T01	AT2G38810	62.338	77	28	1	49	125	57	132	2.29e-27	99.4
MsG0780041273.01.T01	AT2G38810	62.338	77	28	1	49	125	57	132	2.29e-27	99.4
MsG0780041273.01.T01	AT2G38810	62.338	77	28	1	49	125	57	132	2.29e-27	99.4
MsG0780041273.01.T01	AT3G54560	62.338	77	28	1	49	125	57	132	2.56e-27	99.0
MsG0780041273.01.T01	AT3G54560	62.338	77	28	1	49	125	57	132	2.56e-27	99.0
MsG0780041273.01.T01	AT4G13570	54.286	70	31	1	50	119	50	118	1.03e-20	81.6
MsG0780041273.01.T01	AT4G13570	54.286	70	31	1	50	119	56	124	2.71e-20	80.9

Find 41 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTATCTCGCTGCTGAGGTTT+TGG	0.254221	7:-89024683	MsG0780041273.01.T01:CDS
TGAAGAACTCAGCAAGCTTT+TGG	0.258146	7:-89024581	MsG0780041273.01.T01:CDS
AAGCAATGTCTGATGAATAT+TGG	0.288668	7:+89024525	None:intergenic
GAAACGGATTTGGAGGCTTT+TGG	0.298714	7:+89024824	None:intergenic
TGAAGATCTTGAAACGGATT+TGG	0.320293	7:+89024814	None:intergenic
GGAAAAGGGAAAGGTGAAAT+TGG	0.334923	7:-89024490	MsG0780041273.01.T01:CDS
TGTTGTAGTTGTGGCACCTT+TGG	0.379726	7:+89024864	None:intergenic
TCAGACATTGCTTCCTAAGA+AGG	0.403914	7:-89024515	MsG0780041273.01.T01:CDS
AGCAATGTCTGATGAATATT+GGG	0.409255	7:+89024526	None:intergenic
CTTCCTAAGAAGGTTGGAAA+AGG	0.418428	7:-89024505	MsG0780041273.01.T01:CDS
TTCCTCCTTTGTTGTAGTTG+TGG	0.435784	7:+89024855	None:intergenic
GCGTGTTGGCGCCGGTGCTC+CGG	0.455502	7:-89024728	MsG0780041273.01.T01:CDS
TACGCCGAGCGTGTTGGCGC+CGG	0.470776	7:-89024736	MsG0780041273.01.T01:CDS
AGATCTTGAAACGGATTTGG+AGG	0.479759	7:+89024817	None:intergenic
AGCACCGGCGCCAACACGCT+CGG	0.487757	7:+89024732	None:intergenic
ACATTGCTTCCTAAGAAGGT+TGG	0.502061	7:-89024511	MsG0780041273.01.T01:CDS
AATCGCAAGATTCTCAAGGC+TGG	0.513553	7:-89024763	MsG0780041273.01.T01:CDS
AACTACAACAAAGGAGGAAG+AGG	0.518091	7:-89024851	MsG0780041273.01.T01:CDS
GGAAAATACGCCGAGCGTGT+TGG	0.518396	7:-89024742	MsG0780041273.01.T01:CDS
TTCCGACGGGAATTGAAGAC+CGG	0.523339	7:+89024787	None:intergenic
GGTGCCGTAACCATTGCTAA+TGG	0.528391	7:-89024559	MsG0780041273.01.T01:CDS
TTCCTAAGAAGGTTGGAAAA+GGG	0.529191	7:-89024504	MsG0780041273.01.T01:CDS
GTTTCAAGATCTTCAAAAGC+CGG	0.540874	7:-89024806	MsG0780041273.01.T01:CDS
AGAGAGATAGACCGGAGCAC+CGG	0.550862	7:+89024717	None:intergenic
AGAACAGCAGAGAGATAGAC+CGG	0.553809	7:+89024709	None:intergenic
ACCACCATTAGCAATGGTTA+CGG	0.568022	7:+89024555	None:intergenic
ACAGCAAGCTGAATGTGTCT+CGG	0.587168	7:+89024613	None:intergenic
AGGTGCCACAACTACAACAA+AGG	0.596789	7:-89024860	MsG0780041273.01.T01:CDS
AATCTTGCGATTCTTCCGAC+GGG	0.601933	7:+89024774	None:intergenic
GAATCTTGCGATTCTTCCGA+CGG	0.609246	7:+89024773	None:intergenic
AAGAAGGTTGGAAAAGGGAA+AGG	0.622701	7:-89024499	MsG0780041273.01.T01:CDS
AATCCGAAAATGAGTTCCAA+AGG	0.625540	7:-89024880	None:intergenic
GCCGTAACCATTGCTAATGG+TGG	0.628392	7:-89024556	MsG0780041273.01.T01:CDS
GAAGAATCGCAAGATTCTCA+AGG	0.634136	7:-89024767	MsG0780041273.01.T01:CDS
CAAAACACCACCATTAGCAA+TGG	0.637204	7:+89024549	None:intergenic
TCTCGAGTATCTCGCTGCTG+AGG	0.640871	7:-89024689	MsG0780041273.01.T01:CDS
ATTGGCTGGTAATGCTGCGA+GGG	0.649014	7:-89024659	MsG0780041273.01.T01:CDS
AGCCGGTCTTCAATTCCCGT+CGG	0.659223	7:-89024789	MsG0780041273.01.T01:CDS
TGCCACAACTACAACAAAGG+AGG	0.668759	7:-89024857	MsG0780041273.01.T01:CDS
GACACATTCAGCTTGCTGTG+AGG	0.685856	7:-89024609	MsG0780041273.01.T01:CDS
AATTGGCTGGTAATGCTGCG+AGG	0.697250	7:-89024660	MsG0780041273.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGCAATGTCTGATGAATAT+TGG	+	Chr7:89024817-89024836	None:intergenic	30.0%
	AGCAATGTCTGATGAATATT+GGG	+	Chr7:89024816-89024835	None:intergenic	30.0%
	GTTTCAAGATCTTCAAAAGC+CGG	-	Chr7:89024533-89024552	MsG0780041273.01.T01:CDS	35.0%
	TTCCTAAGAAGGTTGGAAAA+GGG	-	Chr7:89024835-89024854	MsG0780041273.01.T01:CDS	35.0%
!	TGAAGATCTTGAAACGGATT+TGG	+	Chr7:89024528-89024547	None:intergenic	35.0%
!!	GGCTTTTGAAGATCTTGAAA+CGG	+	Chr7:89024534-89024553	None:intergenic	35.0%
	AACTACAACAAAGGAGGAAG+AGG	-	Chr7:89024488-89024507	MsG0780041273.01.T01:CDS	40.0%
	AAGAAGGTTGGAAAAGGGAA+AGG	-	Chr7:89024840-89024859	MsG0780041273.01.T01:CDS	40.0%
	ACATTGCTTCCTAAGAAGGT+TGG	-	Chr7:89024828-89024847	MsG0780041273.01.T01:CDS	40.0%
	ACCACCATTAGCAATGGTTA+CGG	+	Chr7:89024787-89024806	None:intergenic	40.0%
	CAAAACACCACCATTAGCAA+TGG	+	Chr7:89024793-89024812	None:intergenic	40.0%
	CTTCCTAAGAAGGTTGGAAA+AGG	-	Chr7:89024834-89024853	MsG0780041273.01.T01:CDS	40.0%
	GAAGAATCGCAAGATTCTCA+AGG	-	Chr7:89024572-89024591	MsG0780041273.01.T01:CDS	40.0%
	GGAAAAGGGAAAGGTGAAAT+TGG	-	Chr7:89024849-89024868	MsG0780041273.01.T01:CDS	40.0%
	TCAGACATTGCTTCCTAAGA+AGG	-	Chr7:89024824-89024843	MsG0780041273.01.T01:CDS	40.0%
!	AGATCTTGAAACGGATTTGG+AGG	+	Chr7:89024525-89024544	None:intergenic	40.0%
!	GAAGAACTCAGCAAGCTTTT+GGG	-	Chr7:89024759-89024778	MsG0780041273.01.T01:CDS	40.0%
!	TGAAGAACTCAGCAAGCTTT+TGG	-	Chr7:89024758-89024777	MsG0780041273.01.T01:CDS	40.0%
!	TTCCCTTTTCCAACCTTCTT+AGG	+	Chr7:89024840-89024859	None:intergenic	40.0%
!	TTCCTCCTTTGTTGTAGTTG+TGG	+	Chr7:89024487-89024506	None:intergenic	40.0%
	AATCGCAAGATTCTCAAGGC+TGG	-	Chr7:89024576-89024595	MsG0780041273.01.T01:CDS	45.0%
	AATCTTGCGATTCTTCCGAC+GGG	+	Chr7:89024568-89024587	None:intergenic	45.0%
	ACAGCAAGCTGAATGTGTCT+CGG	+	Chr7:89024729-89024748	None:intergenic	45.0%
	AGAACAGCAGAGAGATAGAC+CGG	+	Chr7:89024633-89024652	None:intergenic	45.0%
	GAATCTTGCGATTCTTCCGA+CGG	+	Chr7:89024569-89024588	None:intergenic	45.0%
	TGCCACAACTACAACAAAGG+AGG	-	Chr7:89024482-89024501	MsG0780041273.01.T01:CDS	45.0%
	TGTTGTAGTTGTGGCACCTT+TGG	+	Chr7:89024478-89024497	None:intergenic	45.0%
!	AGGTGCCACAACTACAACAA+AGG	-	Chr7:89024479-89024498	MsG0780041273.01.T01:CDS	45.0%
!!	GAAACGGATTTGGAGGCTTT+TGG	+	Chr7:89024518-89024537	None:intergenic	45.0%
	GCCGTAACCATTGCTAATGG+TGG	-	Chr7:89024783-89024802	MsG0780041273.01.T01:CDS	50.0%
	TTCCGACGGGAATTGAAGAC+CGG	+	Chr7:89024555-89024574	None:intergenic	50.0%
!	AATTGGCTGGTAATGCTGCG+AGG	-	Chr7:89024679-89024698	MsG0780041273.01.T01:CDS	50.0%
!	ATTGGCTGGTAATGCTGCGA+GGG	-	Chr7:89024680-89024699	MsG0780041273.01.T01:CDS	50.0%
!	GGTGCCGTAACCATTGCTAA+TGG	-	Chr7:89024780-89024799	MsG0780041273.01.T01:CDS	50.0%
!	GTATCTCGCTGCTGAGGTTT+TGG	-	Chr7:89024656-89024675	MsG0780041273.01.T01:CDS	50.0%
!!	GACACATTCAGCTTGCTGTG+AGG	-	Chr7:89024730-89024749	MsG0780041273.01.T01:CDS	50.0%
!!!	CGCTGCTGAGGTTTTGGAAT+TGG	-	Chr7:89024662-89024681	MsG0780041273.01.T01:CDS	50.0%
!!!	GCTGAGGTTTTGGAATTGGC+TGG	-	Chr7:89024666-89024685	MsG0780041273.01.T01:CDS	50.0%
	AGAGAGATAGACCGGAGCAC+CGG	+	Chr7:89024625-89024644	None:intergenic	55.0%
	AGCCGGTCTTCAATTCCCGT+CGG	-	Chr7:89024550-89024569	MsG0780041273.01.T01:CDS	55.0%
	GGAAAATACGCCGAGCGTGT+TGG	-	Chr7:89024597-89024616	MsG0780041273.01.T01:CDS	55.0%
	TCTCGAGTATCTCGCTGCTG+AGG	-	Chr7:89024650-89024669	MsG0780041273.01.T01:CDS	55.0%
!	TACGCCGAGCGTGTTGGCGC+CGG	-	Chr7:89024603-89024622	MsG0780041273.01.T01:CDS	70.0%
!!	AGCACCGGCGCCAACACGCT+CGG	+	Chr7:89024610-89024629	None:intergenic	70.0%
!!	GCGTGTTGGCGCCGGTGCTC+CGG	-	Chr7:89024611-89024630	MsG0780041273.01.T01:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	89024468	89024893	89024468	ID=MsG0780041273.01;Name=MsG0780041273.01
Chr7	mRNA	89024468	89024893	89024468	ID=MsG0780041273.01.T01;Parent=MsG0780041273.01;Name=MsG0780041273.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|141
Chr7	exon	89024468	89024893	89024468	ID=MsG0780041273.01.T01:exon:3468;Parent=MsG0780041273.01.T01
Chr7	CDS	89024468	89024893	89024468	ID=MsG0780041273.01.T01:cds;Parent=MsG0780041273.01.T01

Gene Sequence

>MsG0780041273.01.T01

ATGAGTTCCAAAGGTGCCACAACTACAACAAAGGAGGAAGAGGCAAACCAAAAGCCTCCAAATCCGTTTCAAGATCTTCAAAAGCCGGTCTTCAATTCCCGTCGGAAGAATCGCAAGATTCTCAAGGCTGGAAAATACGCCGAGCGTGTTGGCGCCGGTGCTCCGGTCTATCTCTCTGCTGTTCTCGAGTATCTCGCTGCTGAGGTTTTGGAATTGGCTGGTAATGCTGCGAGGGACAACAAAAAGAATCGAATTGTTCCGAGACACATTCAGCTTGCTGTGAGGAATGATGAAGAACTCAGCAAGCTTTTGGGTGCCGTAACCATTGCTAATGGTGGTGTTTTGCCCAATATTCATCAGACATTGCTTCCTAAGAAGGTTGGAAAAGGGAAAGGTGAAATTGGATCTGCTTCTCAAGAATTTTAG

Protein sequence

>MsG0780041273.01.T01

MSSKGATTTTKEEEANQKPPNPFQDLQKPVFNSRRKNRKILKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGKGKGEIGSASQEF*