AlfalfaGEDB | MsG0380013452.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013452.01

KEGG: -
GO: -
PFAM: PF14009

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013452.01.T01	XP_013459517.1	88.426	216	12	2	1	203	2	217	1.04E-130	377
MsG0380013452.01.T02	XP_013459517.1	91.204	216	16	2	9	221	2	217	1.64E-131	379
MsG0380013452.01.T03	XP_013459517.1	91.204	216	16	2	1	213	2	217	7.19E-132	380

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013452.01.T01	A0A072UWV1	88.426	216	12	2	1	203	2	217	4.95e-131	377
MsG0380013452.01.T02	A0A072UWV1	91.204	216	16	2	9	221	2	217	7.83e-132	379
MsG0380013452.01.T03	A0A072UWV1	91.204	216	16	2	1	213	2	217	3.43e-132	380

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048036.01	MsG0380013452.01	0.833303	5.764320e-56	6.611748e-53
MsG0080048301.01	MsG0380013452.01	0.800096	1.692050e-48	7.810475e-46
MsG0080048345.01	MsG0380013452.01	0.860972	1.422659e-63	3.960713e-60
MsG0080048347.01	MsG0380013452.01	0.870169	1.788154e-66	6.888904e-63
MsG0080048348.01	MsG0380013452.01	0.851845	6.807433e-61	1.395798e-57
MsG0080048349.01	MsG0380013452.01	0.828212	1.019322e-54	1.006536e-51
MsG0080048350.01	MsG0380013452.01	0.838330	3.066560e-57	4.093465e-54
MsG0080048352.01	MsG0380013452.01	0.872720	2.560487e-67	1.082687e-63
MsG0180000234.01	MsG0380013452.01	0.835974	1.227815e-56	1.525760e-53
MsG0180000930.01	MsG0380013452.01	0.830056	3.640407e-55	3.793104e-52
MsG0180001050.01	MsG0380013452.01	0.849679	2.769479e-60	5.291780e-57
MsG0180001463.01	MsG0380013452.01	0.804092	2.549422e-49	1.302892e-46
MsG0180001691.01	MsG0380013452.01	0.822998	1.755088e-53	1.492570e-50
MsG0180002274.01	MsG0380013452.01	0.806438	8.226775e-50	4.465229e-47
MsG0180003240.01	MsG0380013452.01	0.877796	4.712075e-69	2.400929e-65
MsG0180003248.01	MsG0380013452.01	0.810398	1.175625e-50	7.078732e-48
MsG0180003830.01	MsG0380013452.01	0.831650	1.479984e-55	1.616189e-52
MsG0180004203.01	MsG0380013452.01	0.850257	1.909084e-60	3.717493e-57
MsG0180004328.01	MsG0380013452.01	0.820640	6.162828e-53	4.903306e-50
MsG0180004562.01	MsG0380013452.01	0.836740	7.840747e-57	9.971239e-54
MsG0180004941.01	MsG0380013452.01	0.808857	2.520053e-50	1.456769e-47
MsG0180004942.01	MsG0380013452.01	0.812842	3.458554e-51	2.222397e-48
MsG0180005356.01	MsG0380013452.01	0.880645	4.629296e-70	2.630780e-66
MsG0180005357.01	MsG0380013452.01	0.867539	1.270042e-65	4.450403e-62
MsG0180005358.01	MsG0380013452.01	0.875573	2.770834e-68	1.300324e-64
MsG0180005648.01	MsG0380013452.01	0.865211	6.959193e-65	2.246015e-61
MsG0280010802.01	MsG0380013452.01	0.843041	1.788352e-58	2.762895e-55
MsG0280011042.01	MsG0380013452.01	0.836938	6.975947e-57	8.924797e-54
MsG0280011165.01	MsG0380013452.01	0.823508	1.333871e-53	1.150798e-50
MsG0280011203.01	MsG0380013452.01	0.804922	1.712036e-49	8.938988e-47
MsG0380011613.01	MsG0380013452.01	0.874419	6.854544e-68	3.083458e-64
MsG0380012654.01	MsG0380013452.01	0.822417	2.395392e-53	2.003838e-50
MsG0380013300.01	MsG0380013452.01	0.874751	5.284819e-68	2.406697e-64
MsG0380013449.01	MsG0380013452.01	0.977963	7.648239e-145	1.424516e-138
MsG0380013452.01	MsG0380013458.01	0.952743	1.252085e-110	3.128268e-105
MsG0380013452.01	MsG0380015010.01	0.811334	7.373202e-51	4.551312e-48
MsG0380013452.01	MsG0380016020.01	0.814430	1.546986e-51	1.037812e-48
MsG0380013452.01	MsG0380016086.01	0.807220	5.620789e-50	3.113089e-47
MsG0380013452.01	MsG0380016345.01	0.804488	2.109297e-49	1.088922e-46
MsG0380013452.01	MsG0380016801.01	0.806791	6.929444e-50	3.795271e-47
MsG0380013452.01	MsG0380017151.01	0.844213	8.688031e-59	1.392826e-55
MsG0380013452.01	MsG0380017690.01	0.840025	1.114677e-57	1.567790e-54
MsG0380013452.01	MsG0380017754.01	0.853425	2.410469e-61	5.206496e-58
MsG0380013452.01	MsG0480018807.01	0.804476	2.121094e-49	1.094692e-46
MsG0380013452.01	MsG0480020497.01	0.842109	3.160074e-58	4.742343e-55
MsG0380013452.01	MsG0480021697.01	0.804046	2.607103e-49	1.330772e-46
MsG0380013452.01	MsG0480022125.01	0.826556	2.541965e-54	2.391910e-51
MsG0380013452.01	MsG0480022309.01	0.810162	1.322167e-50	7.912093e-48
MsG0380013452.01	MsG0480022310.01	0.814896	1.219964e-51	8.287104e-49
MsG0380013452.01	MsG0480022400.01	0.805647	1.206575e-49	6.417875e-47
MsG0380013452.01	MsG0480022680.01	0.801082	1.064619e-48	5.039049e-46
MsG0380013452.01	MsG0480022736.01	0.824089	9.751656e-54	8.551881e-51
MsG0380013452.01	MsG0480023107.01	0.840781	7.070279e-58	1.017912e-54
MsG0380013452.01	MsG0480023349.01	0.827109	1.876240e-54	1.793904e-51
MsG0380013452.01	MsG0480023819.01	0.822243	2.629679e-53	2.188775e-50
MsG0380013452.01	MsG0480023921.01	0.837928	3.890196e-57	5.130176e-54
MsG0380013452.01	MsG0580024218.01	0.841209	5.458068e-58	7.962201e-55
MsG0380013452.01	MsG0580024219.01	0.818022	2.434405e-52	1.801434e-49
MsG0380013452.01	MsG0580024408.01	0.833598	4.863409e-56	5.627642e-53
MsG0380013452.01	MsG0580024990.01	0.825486	4.567011e-54	4.168266e-51
MsG0380013452.01	MsG0580025682.01	0.802370	5.792725e-49	2.832853e-46
MsG0380013452.01	MsG0580025683.01	0.810246	1.267932e-50	7.604364e-48
MsG0380013452.01	MsG0580025876.01	0.813390	2.622865e-51	1.710673e-48
MsG0380013452.01	MsG0580026925.01	0.804351	2.252498e-49	1.158792e-46
MsG0380013452.01	MsG0580027646.01	0.804712	1.894134e-49	9.835658e-47
MsG0380013452.01	MsG0580028999.01	0.834034	3.785521e-56	4.438112e-53
MsG0380013452.01	MsG0580029555.01	0.806496	7.999059e-50	4.348022e-47
MsG0380013452.01	MsG0580029626.01	0.848779	4.929616e-60	9.147877e-57
MsG0380013452.01	MsG0580030133.01	0.871146	8.531555e-67	3.404626e-63
MsG0380013452.01	MsG0580030135.01	0.838116	3.480690e-57	4.616218e-54
MsG0380013452.01	MsG0580030145.01	0.813912	2.013151e-51	1.331631e-48
MsG0380013452.01	MsG0680030336.01	0.811948	5.421496e-51	3.401701e-48
MsG0380013452.01	MsG0680030559.01	0.822984	1.767986e-53	1.502967e-50
MsG0380013452.01	MsG0680031429.01	0.828946	6.775089e-55	6.834032e-52
MsG0380013452.01	MsG0680035496.01	0.802082	6.642812e-49	3.224557e-46
MsG0380013452.01	MsG0780036661.01	0.860960	1.434916e-63	3.993154e-60
MsG0380013452.01	MsG0780036959.01	0.816749	4.709828e-52	3.365876e-49
MsG0380013452.01	MsG0780038755.01	0.827060	1.926797e-54	1.839714e-51
MsG0380013452.01	MsG0780038939.01	0.848654	5.339919e-60	9.868547e-57
MsG0380013452.01	MsG0780039190.01	0.811240	7.730114e-51	4.759948e-48
MsG0380013452.01	MsG0780039334.01	0.826406	2.761424e-54	2.587473e-51
MsG0380013452.01	MsG0780039576.01	0.847492	1.117313e-59	1.989419e-56
MsG0380013452.01	MsG0780039968.01	0.840200	1.003626e-57	1.419172e-54
MsG0380013452.01	MsG0780039978.01	0.823385	1.424931e-53	1.224964e-50
MsG0380013452.01	MsG0780040181.01	0.824878	6.356890e-54	5.703012e-51
MsG0380013452.01	MsG0780040613.01	0.815313	9.853747e-52	6.770417e-49
MsG0380013452.01	MsG0780041198.01	0.817996	2.468076e-52	1.825071e-49
MsG0380013452.01	MsG0780041299.01	0.803453	3.460694e-49	1.739753e-46
MsG0380013452.01	MsG0780041316.01	0.821033	5.004802e-53	4.026544e-50
MsG0380013452.01	MsG0780041556.01	0.864305	1.337996e-64	4.181253e-61
MsG0380013452.01	MsG0780041574.01	0.806940	6.444746e-50	3.543429e-47
MsG0380013452.01	MsG0880042591.01	0.808587	2.878504e-50	1.652223e-47
MsG0380013452.01	MsG0880042740.01	0.827344	1.647960e-54	1.586802e-51
MsG0380013452.01	MsG0880042810.01	0.801225	9.955524e-49	4.728916e-46
MsG0380013452.01	MsG0880043481.01	0.807428	5.080460e-50	2.828994e-47
MsG0380013452.01	MsG0880043828.01	0.830191	3.374426e-55	3.530142e-52
MsG0380013452.01	MsG0880045441.01	0.818287	2.120259e-52	1.580472e-49
MsG0380013452.01	MsG0880045677.01	0.850303	1.852357e-60	3.612579e-57
MsG0380013452.01	MsG0880046429.01	0.840370	9.059287e-58	1.287728e-54
MsG0380013452.01	MsG0880046996.01	0.816981	4.178085e-52	3.005089e-49
MsG0380013452.01	MsG0880047665.01	0.830360	3.068766e-55	3.226000e-52
MsG0380013452.01	MsG0880047747.01	0.850133	2.067892e-60	4.010068e-57
MsG0280007216.01	MsG0380013452.01	0.810313	1.226581e-50	7.369146e-48
MsG0280007911.01	MsG0380013452.01	0.820688	6.011236e-53	4.789153e-50
MsG0280008405.01	MsG0380013452.01	0.851769	7.151052e-61	1.462764e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013452.01.T01	MTR_3g045790	88.426	216	12	2	1	203	2	217	1.26e-134	377
MsG0380013452.01.T01	MTR_5g089820	64.433	194	65	1	1	194	2	191	8.72e-85	250
MsG0380013452.01.T01	MTR_4g118680	82.500	40	7	0	155	194	6	45	3.74e-15	67.8
MsG0380013452.01.T02	MTR_3g045790	91.204	216	16	2	9	221	2	217	1.99e-135	379
MsG0380013452.01.T02	MTR_5g089820	62.255	204	63	3	9	212	2	191	8.06e-83	246
MsG0380013452.01.T02	MTR_4g118680	82.500	40	7	0	173	212	6	45	5.39e-15	67.8
MsG0380013452.01.T03	MTR_3g045790	91.204	216	16	2	1	213	2	217	8.71e-136	380
MsG0380013452.01.T03	MTR_5g089820	62.255	204	63	3	1	204	2	191	3.74e-83	246
MsG0380013452.01.T03	MTR_4g118680	82.500	40	7	0	165	204	6	45	4.12e-15	67.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013452.01.T01	AT5G12340	41.546	207	112	4	1	198	2	208	7.61e-48	156
MsG0380013452.01.T01	AT5G12340	41.546	207	112	4	1	198	5	211	8.48e-48	156
MsG0380013452.01.T01	AT1G28190	27.692	195	128	5	8	192	25	216	1.41e-13	68.2
MsG0380013452.01.T02	AT5G12340	44.385	187	94	5	40	216	25	211	1.82e-45	151
MsG0380013452.01.T02	AT5G12340	44.385	187	94	5	40	216	22	208	1.86e-45	151
MsG0380013452.01.T02	AT1G28190	26.601	203	130	5	16	210	25	216	1.57e-12	65.5
MsG0380013452.01.T03	AT5G12340	44.385	187	94	5	32	208	22	208	1.17e-45	151
MsG0380013452.01.T03	AT5G12340	44.385	187	94	5	32	208	25	211	1.70e-45	151
MsG0380013452.01.T03	AT1G28190	26.601	203	130	5	8	202	25	216	1.36e-12	65.5

Find 35 sgRNAs with CRISPR-Local

Find 45 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCTAAGCTTGAAACTATTT+TGG	0.091162	3:+38330680	MsG0380013452.01.T03:CDS
CGTCAGCTAAGCTTATATTT+TGG	0.226292	3:+38330190	MsG0380013452.01.T03:CDS
AACAAGTCAACAATCAAATT+TGG	0.260285	3:+38330456	MsG0380013452.01.T03:CDS
TTGCATGAAAAGAGATCAAT+AGG	0.299018	3:-38330378	None:intergenic
CGGACACCCGATCCCTAGTT+TGG	0.310287	3:+38330311	MsG0380013452.01.T03:CDS
TTCATCACAAGGCTTGTTAA+TGG	0.314435	3:+38330543	MsG0380013452.01.T03:CDS
GCGTGACAAACCATCGTCTC+TGG	0.356966	3:-38330273	None:intergenic
TGAAATGCTTGTGAAGTCTA+AGG	0.382530	3:+38330644	MsG0380013452.01.T03:CDS
CTTGTTAATGGAGATAGATC+AGG	0.402456	3:+38330555	MsG0380013452.01.T03:CDS
CAATCCTTCAAATACTCAAA+AGG	0.411864	3:-38330486	None:intergenic
TCCAAAATAGTTTCAAGCTT+AGG	0.413585	3:-38330681	None:intergenic
TTAGAAGACGAACTCTTTCA+AGG	0.441583	3:+38330336	MsG0380013452.01.T03:CDS
GCTTGTGAAGTCTAAGGATC+AGG	0.441885	3:+38330650	MsG0380013452.01.T03:CDS
TATCTAGCAGACACAGTTTG+TGG	0.463540	3:-38330751	None:intergenic
TCGTCTTCTAAATCCAAACT+AGG	0.463904	3:-38330324	None:intergenic
TGATGGAAAAGTGTTGATAA+AGG	0.464603	3:+38330509	MsG0380013452.01.T03:CDS
AAGGAGAGAAAAGAGAGAAA+AGG	0.490465	3:+38330723	MsG0380013452.01.T03:CDS
AAACAAGGTTAGACTTAGAA+AGG	0.491346	3:+38330704	MsG0380013452.01.T03:CDS
CTAAATCCAAACTAGGGATC+GGG	0.491708	3:-38330317	None:intergenic
AATCCTTCAAATACTCAAAA+GGG	0.496327	3:-38330485	None:intergenic
TGAAGTCTAAGGATCAGGTT+TGG	0.505035	3:+38330655	MsG0380013452.01.T03:CDS
TCTAAATCCAAACTAGGGAT+CGG	0.527145	3:-38330318	None:intergenic
ACAAGCCTTGTGATGAACTC+TGG	0.550575	3:-38330537	None:intergenic
CGTGACAAACCATCGTCTCT+GGG	0.573900	3:-38330272	None:intergenic
CTAAACGGTAAGCACATCGC+TGG	0.579320	3:+38330231	MsG0380013452.01.T03:CDS
GGTTCCACGAGATTGCTAAA+CGG	0.584296	3:+38330216	MsG0380013452.01.T03:CDS
CGTCTTCTAAATCCAAACTA+GGG	0.587535	3:-38330323	None:intergenic
TTGTTAATGGAGATAGATCA+GGG	0.611228	3:+38330556	MsG0380013452.01.T03:CDS
TCAACTCAGGGGTACTACAA+AGG	0.612009	3:-38330611	None:intergenic
GAGTATTTGAAGGATTGTGA+TGG	0.613286	3:+38330492	MsG0380013452.01.T03:CDS
TGCATGAAAAGAGATCAATA+GGG	0.622739	3:-38330377	None:intergenic
CTTACCGTTTAGCAATCTCG+TGG	0.635041	3:-38330220	None:intergenic
AATATAAGCTTAGCTGACGA+TGG	0.640456	3:-38330186	None:intergenic
GTTCGAGTACCCAGAGACGA+TGG	0.655665	3:+38330263	MsG0380013452.01.T03:CDS
TTATGCCAGAGTTCATCACA+AGG	0.712497	3:+38330532	MsG0380013452.01.T03:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTATTTTATTTTCAACAA+TGG	+	Chr3:38330087-38330106	MsG0380013452.01.T02:CDS	10.0%
!!!	TTTATTTTATTTTCAACAAT+GGG	+	Chr3:38330088-38330107	MsG0380013452.01.T02:CDS	10.0%
!	AACAAGTCAACAATCAAATT+TGG	+	Chr3:38330456-38330475	MsG0380013452.01.T03:CDS	25.0%
!	AATCCTTCAAATACTCAAAA+GGG	-	Chr3:38330488-38330507	None:intergenic	25.0%
!!	GATGATAATTTTCTGTTTTG+AGG	-	Chr3:38330141-38330160	None:intergenic	25.0%
!!!	ATAATGTTTTTTCAACTCAG+GGG	-	Chr3:38330625-38330644	None:intergenic	25.0%
!!!	CATAATGTTTTTTCAACTCA+GGG	-	Chr3:38330626-38330645	None:intergenic	25.0%
!!!	TCATAATGTTTTTTCAACTC+AGG	-	Chr3:38330627-38330646	None:intergenic	25.0%
!!!	TGAAACTATTTTGGAAAACA+AGG	+	Chr3:38330689-38330708	MsG0380013452.01.T03:CDS	25.0%
	AAACAAGGTTAGACTTAGAA+AGG	+	Chr3:38330704-38330723	MsG0380013452.01.T03:CDS	30.0%
	CAATCCTTCAAATACTCAAA+AGG	-	Chr3:38330489-38330508	None:intergenic	30.0%
	TCCAAAATAGTTTCAAGCTT+AGG	-	Chr3:38330684-38330703	None:intergenic	30.0%
	TGCATGAAAAGAGATCAATA+GGG	-	Chr3:38330380-38330399	None:intergenic	30.0%
	TTGCATGAAAAGAGATCAAT+AGG	-	Chr3:38330381-38330400	None:intergenic	30.0%
	TTGTTAATGGAGATAGATCA+GGG	+	Chr3:38330556-38330575	MsG0380013452.01.T03:CDS	30.0%
!	TCCTAAGCTTGAAACTATTT+TGG	+	Chr3:38330680-38330699	MsG0380013452.01.T03:CDS	30.0%
!!	TGATGGAAAAGTGTTGATAA+AGG	+	Chr3:38330509-38330528	MsG0380013452.01.T03:CDS	30.0%
	AAGGAGAGAAAAGAGAGAAA+AGG	+	Chr3:38330723-38330742	MsG0380013452.01.T03:CDS	35.0%
	AATATAAGCTTAGCTGACGA+TGG	-	Chr3:38330189-38330208	None:intergenic	35.0%
	CGTCTTCTAAATCCAAACTA+GGG	-	Chr3:38330326-38330345	None:intergenic	35.0%
	CTTGTTAATGGAGATAGATC+AGG	+	Chr3:38330555-38330574	MsG0380013452.01.T03:CDS	35.0%
	GAGTATTTGAAGGATTGTGA+TGG	+	Chr3:38330492-38330511	MsG0380013452.01.T03:CDS	35.0%
	TCGTCTTCTAAATCCAAACT+AGG	-	Chr3:38330327-38330346	None:intergenic	35.0%
	TCTAAATCCAAACTAGGGAT+CGG	-	Chr3:38330321-38330340	None:intergenic	35.0%
	TGAAATGCTTGTGAAGTCTA+AGG	+	Chr3:38330644-38330663	MsG0380013452.01.T03:CDS	35.0%
	TTAGAAGACGAACTCTTTCA+AGG	+	Chr3:38330336-38330355	MsG0380013452.01.T03:CDS	35.0%
!	CGTCAGCTAAGCTTATATTT+TGG	+	Chr3:38330190-38330209	MsG0380013452.01.T03:CDS	35.0%
!!	TTCATCACAAGGCTTGTTAA+TGG	+	Chr3:38330543-38330562	MsG0380013452.01.T03:CDS	35.0%
!!!	CTGTTTTGAGGATGAAAACA+TGG	-	Chr3:38330129-38330148	None:intergenic	35.0%
!!!	GCTAAGCTTATATTTTGGCA+AGG	+	Chr3:38330195-38330214	MsG0380013452.01.T03:CDS	35.0%
	CTAAATCCAAACTAGGGATC+GGG	-	Chr3:38330320-38330339	None:intergenic	40.0%
	TGAAGTCTAAGGATCAGGTT+TGG	+	Chr3:38330655-38330674	MsG0380013452.01.T03:CDS	40.0%
	TTATGCCAGAGTTCATCACA+AGG	+	Chr3:38330532-38330551	MsG0380013452.01.T03:CDS	40.0%
!!	GTGCCCTTTTGAGTATTTGA+AGG	+	Chr3:38330482-38330501	MsG0380013452.01.T03:CDS	40.0%
	CTTACCGTTTAGCAATCTCG+TGG	-	Chr3:38330223-38330242	None:intergenic	45.0%
	GCTTGTGAAGTCTAAGGATC+AGG	+	Chr3:38330650-38330669	MsG0380013452.01.T03:CDS	45.0%
	GGTTCCACGAGATTGCTAAA+CGG	+	Chr3:38330216-38330235	MsG0380013452.01.T03:CDS	45.0%
!	ACAAGCCTTGTGATGAACTC+TGG	-	Chr3:38330540-38330559	None:intergenic	45.0%
!!	TCAACTCAGGGGTACTACAA+AGG	-	Chr3:38330614-38330633	None:intergenic	45.0%
!!!	CACGCTGACTCGTTTTTCAT+CGG	+	Chr3:38330291-38330310	MsG0380013452.01.T03:CDS	45.0%
	CGTGACAAACCATCGTCTCT+GGG	-	Chr3:38330275-38330294	None:intergenic	50.0%
	CTAAACGGTAAGCACATCGC+TGG	+	Chr3:38330231-38330250	MsG0380013452.01.T03:CDS	50.0%
	GCGTGACAAACCATCGTCTC+TGG	-	Chr3:38330276-38330295	None:intergenic	55.0%
	GTTCGAGTACCCAGAGACGA+TGG	+	Chr3:38330263-38330282	MsG0380013452.01.T03:CDS	55.0%
	CGGACACCCGATCCCTAGTT+TGG	+	Chr3:38330311-38330330	MsG0380013452.01.T03:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	38330084	38330770	38330084	ID=MsG0380013452.01;Name=MsG0380013452.01
Chr3	mRNA	38330108	38330770	38330108	ID=MsG0380013452.01.T01;Parent=MsG0380013452.01;Name=MsG0380013452.01.T01;_AED=0.41;_eAED=0.43;_QI=0\|0\|0\|1\|0\|0\|2\|0\|210
Chr3	exon	38330108	38330165	38330108	ID=MsG0380013452.01.T01:exon:12507;Parent=MsG0380013452.01.T01
Chr3	exon	38330196	38330770	38330196	ID=MsG0380013452.01.T01:exon:12508;Parent=MsG0380013452.01.T01
Chr3	CDS	38330108	38330165	38330108	ID=MsG0380013452.01.T01:cds;Parent=MsG0380013452.01.T01
Chr3	CDS	38330196	38330770	38330196	ID=MsG0380013452.01.T01:cds;Parent=MsG0380013452.01.T01
Chr3	mRNA	38330084	38330770	38330084	ID=MsG0380013452.01.T02;Parent=MsG0380013452.01;Name=MsG0380013452.01.T02;_AED=0.40;_eAED=0.40;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|228
Chr3	exon	38330084	38330770	38330084	ID=MsG0380013452.01.T02:exon:12509;Parent=MsG0380013452.01.T02
Chr3	CDS	38330084	38330770	38330084	ID=MsG0380013452.01.T02:cds;Parent=MsG0380013452.01.T02
Chr3	mRNA	38330108	38330770	38330108	ID=MsG0380013452.01.T03;Parent=MsG0380013452.01;Name=MsG0380013452.01.T03;_AED=0.41;_eAED=0.41;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|220
Chr3	exon	38330108	38330770	38330108	ID=MsG0380013452.01.T03:exon:12510;Parent=MsG0380013452.01.T03
Chr3	CDS	38330108	38330770	38330108	ID=MsG0380013452.01.T03:cds;Parent=MsG0380013452.01.T03

Gene Sequence

>MsG0380013452.01.T01

GGGAAATTAGTAGTGACTCCATGTTTTCATCCTCAAAACAGAAAATTATCATCTTCATCTAAGCTTATATTTTGGCAAGGTTCCACGAGATTGCTAAACGGTAAGCACATCGCTGGCGAGATCTTGTTCGAGTACCCAGAGACGATGGTTTGTCACGCTGACTCGTTTTTCATCGGACACCCGATCCCTAGTTTGGATTTAGAAGACGAACTCTTTCAAGGAGAGACTTATTTTGTTCTCCCTATTGATCTCTTTTCATGCAAAACACTCTCAGTTTCTTCACTCTTATCATTTAGATCACATAATAATGATAGTAACAACAAGTCAACAATCAAATTTGGAGAGTGCCCTTTTGAGTATTTGAAGGATTGTGATGGAAAAGTGTTGATAAAGGTTATGCCAGAGTTCATCACAAGGCTTGTTAATGGAGATAGATCAGGGAATGATTGTTGCATTAGTAATAAAAGTAGCTTCCTTTGTAGTACCCCTGAGTTGAAAAAACATTATGAAATGCTTGTGAAGTCTAAGGATCAGGTTTGGTCTCCTAAGCTTGAAACTATTTTGGAAAACAAGGTTAGACTTAGAAAGGAGAGAAAAGAGAGAAAAGGCACAACCACAAACTGTGTCTGCTAG

>MsG0380013452.01.T02

TTGATTTATTTTATTTTCAACAATGGGAAATTAGTAGTGACTCCATGTTTTCATCCTCAAAACAGAAAATTATCATCTTCATCGTCGTCGTCGTCGTTGCTGCCATCGTCAGCTAAGCTTATATTTTGGCAAGGTTCCACGAGATTGCTAAACGGTAAGCACATCGCTGGCGAGATCTTGTTCGAGTACCCAGAGACGATGGTTTGTCACGCTGACTCGTTTTTCATCGGACACCCGATCCCTAGTTTGGATTTAGAAGACGAACTCTTTCAAGGAGAGACTTATTTTGTTCTCCCTATTGATCTCTTTTCATGCAAAACACTCTCAGTTTCTTCACTCTTATCATTTAGATCACATAATAATGATAGTAACAACAAGTCAACAATCAAATTTGGAGAGTGCCCTTTTGAGTATTTGAAGGATTGTGATGGAAAAGTGTTGATAAAGGTTATGCCAGAGTTCATCACAAGGCTTGTTAATGGAGATAGATCAGGGAATGATTGTTGCATTAGTAATAAAAGTAGCTTCCTTTGTAGTACCCCTGAGTTGAAAAAACATTATGAAATGCTTGTGAAGTCTAAGGATCAGGTTTGGTCTCCTAAGCTTGAAACTATTTTGGAAAACAAGGTTAGACTTAGAAAGGAGAGAAAAGAGAGAAAAGGCACAACCACAAACTGTGTCTGCTAG

>MsG0380013452.01.T03

GGGAAATTAGTAGTGACTCCATGTTTTCATCCTCAAAACAGAAAATTATCATCTTCATCGTCGTCGTCGTCGTTGCTGCCATCGTCAGCTAAGCTTATATTTTGGCAAGGTTCCACGAGATTGCTAAACGGTAAGCACATCGCTGGCGAGATCTTGTTCGAGTACCCAGAGACGATGGTTTGTCACGCTGACTCGTTTTTCATCGGACACCCGATCCCTAGTTTGGATTTAGAAGACGAACTCTTTCAAGGAGAGACTTATTTTGTTCTCCCTATTGATCTCTTTTCATGCAAAACACTCTCAGTTTCTTCACTCTTATCATTTAGATCACATAATAATGATAGTAACAACAAGTCAACAATCAAATTTGGAGAGTGCCCTTTTGAGTATTTGAAGGATTGTGATGGAAAAGTGTTGATAAAGGTTATGCCAGAGTTCATCACAAGGCTTGTTAATGGAGATAGATCAGGGAATGATTGTTGCATTAGTAATAAAAGTAGCTTCCTTTGTAGTACCCCTGAGTTGAAAAAACATTATGAAATGCTTGTGAAGTCTAAGGATCAGGTTTGGTCTCCTAAGCTTGAAACTATTTTGGAAAACAAGGTTAGACTTAGAAAGGAGAGAAAAGAGAGAAAAGGCACAACCACAAACTGTGTCTGCTAG

Protein sequence

>MsG0380013452.01.T01

GKLVVTPCFHPQNRKLSSSSKLIFWQGSTRLLNGKHIAGEILFEYPETMVCHADSFFIGHPIPSLDLEDELFQGETYFVLPIDLFSCKTLSVSSLLSFRSHNNDSNNKSTIKFGECPFEYLKDCDGKVLIKVMPEFITRLVNGDRSGNDCCISNKSSFLCSTPELKKHYEMLVKSKDQVWSPKLETILENKVRLRKERKERKGTTTNCVC*

>MsG0380013452.01.T02

LIYFIFNNGKLVVTPCFHPQNRKLSSSSSSSSLLPSSAKLIFWQGSTRLLNGKHIAGEILFEYPETMVCHADSFFIGHPIPSLDLEDELFQGETYFVLPIDLFSCKTLSVSSLLSFRSHNNDSNNKSTIKFGECPFEYLKDCDGKVLIKVMPEFITRLVNGDRSGNDCCISNKSSFLCSTPELKKHYEMLVKSKDQVWSPKLETILENKVRLRKERKERKGTTTNCVC*

>MsG0380013452.01.T03

GKLVVTPCFHPQNRKLSSSSSSSSLLPSSAKLIFWQGSTRLLNGKHIAGEILFEYPETMVCHADSFFIGHPIPSLDLEDELFQGETYFVLPIDLFSCKTLSVSSLLSFRSHNNDSNNKSTIKFGECPFEYLKDCDGKVLIKVMPEFITRLVNGDRSGNDCCISNKSSFLCSTPELKKHYEMLVKSKDQVWSPKLETILENKVRLRKERKERKGTTTNCVC*