Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003248.01.T01 | XP_013467846.2 | 95 | 440 | 19 | 1 | 1 | 440 | 1 | 437 | 0 | 838 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003248.01.T01 | Q9SVC6 | 53.047 | 443 | 193 | 6 | 1 | 437 | 1 | 434 | 8.15E-152 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003248.01.T01 | A0A396JPS1 | 95.000 | 440 | 19 | 1 | 1 | 440 | 1 | 437 | 0.0 | 838 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0180003248.01 | 0.835590 | 1.535655e-56 | 1.886379e-53 |
| MsG0080048301.01 | MsG0180003248.01 | 0.810486 | 1.125552e-50 | 6.793258e-48 |
| MsG0080048345.01 | MsG0180003248.01 | 0.841060 | 5.972897e-58 | 8.672791e-55 |
| MsG0080048347.01 | MsG0180003248.01 | 0.866104 | 3.639082e-65 | 1.212131e-61 |
| MsG0080048348.01 | MsG0180003248.01 | 0.809507 | 1.828605e-50 | 1.075591e-47 |
| MsG0080048349.01 | MsG0180003248.01 | 0.819829 | 9.456462e-53 | 7.356945e-50 |
| MsG0080048350.01 | MsG0180003248.01 | 0.803619 | 3.197101e-49 | 1.614119e-46 |
| MsG0080048352.01 | MsG0180003248.01 | 0.861830 | 7.788327e-64 | 2.232806e-60 |
| MsG0080049066.01 | MsG0180003248.01 | -0.804008 | 2.654393e-49 | 1.353610e-46 |
| MsG0180000929.01 | MsG0180003248.01 | 0.811924 | 5.489326e-51 | 3.441767e-48 |
| MsG0180000930.01 | MsG0180003248.01 | 0.825450 | 4.656455e-54 | 4.245428e-51 |
| MsG0180001463.01 | MsG0180003248.01 | 0.810280 | 1.246715e-50 | 7.483518e-48 |
| MsG0180001513.01 | MsG0180003248.01 | 0.810119 | 1.350366e-50 | 8.072243e-48 |
| MsG0180001533.01 | MsG0180003248.01 | 0.812595 | 3.917182e-51 | 2.500933e-48 |
| MsG0180001691.01 | MsG0180003248.01 | 0.824202 | 9.169869e-54 | 8.067816e-51 |
| MsG0180002274.01 | MsG0180003248.01 | 0.826755 | 2.279487e-54 | 2.157174e-51 |
| MsG0180002935.01 | MsG0180003248.01 | 0.805903 | 1.066006e-49 | 5.707622e-47 |
| MsG0180003235.01 | MsG0180003248.01 | 0.816827 | 4.524744e-52 | 3.240384e-49 |
| MsG0180003240.01 | MsG0180003248.01 | 0.831144 | 1.971981e-55 | 2.121284e-52 |
| MsG0180003248.01 | MsG0180003249.01 | 0.921012 | 6.171616e-88 | 2.155808e-83 |
| MsG0180003248.01 | MsG0180003250.01 | 0.925214 | 2.484618e-90 | 1.096114e-85 |
| MsG0180003248.01 | MsG0180003338.01 | 0.833228 | 6.014771e-56 | 6.883490e-53 |
| MsG0180003248.01 | MsG0180004203.01 | 0.822984 | 1.768407e-53 | 1.503302e-50 |
| MsG0180003248.01 | MsG0180004328.01 | 0.805343 | 1.397737e-49 | 7.376604e-47 |
| MsG0180003248.01 | MsG0180004942.01 | 0.830275 | 3.218424e-55 | 3.374882e-52 |
| MsG0180003248.01 | MsG0180005328.01 | 0.803625 | 3.188781e-49 | 1.610140e-46 |
| MsG0180003248.01 | MsG0180005356.01 | 0.874008 | 9.440989e-68 | 4.182274e-64 |
| MsG0180003248.01 | MsG0180005357.01 | 0.843683 | 1.205196e-58 | 1.900329e-55 |
| MsG0180003248.01 | MsG0180005358.01 | 0.870479 | 1.414403e-66 | 5.510443e-63 |
| MsG0180003248.01 | MsG0180005417.01 | 0.806592 | 7.631885e-50 | 4.158614e-47 |
| MsG0180003248.01 | MsG0180005572.01 | 0.814530 | 1.469884e-51 | 9.887720e-49 |
| MsG0180003248.01 | MsG0180005648.01 | 0.839562 | 1.471577e-57 | 2.039781e-54 |
| MsG0180003248.01 | MsG0280006442.01 | 0.814153 | 1.781182e-51 | 1.185935e-48 |
| MsG0180003248.01 | MsG0280006883.01 | 0.825100 | 5.633772e-54 | 5.086116e-51 |
| MsG0180003248.01 | MsG0280007216.01 | 0.818983 | 1.474563e-52 | 1.120639e-49 |
| MsG0180003248.01 | MsG0280007759.01 | 0.815698 | 8.089063e-52 | 5.617041e-49 |
| MsG0180003248.01 | MsG0280007911.01 | 0.827661 | 1.382864e-54 | 1.343671e-51 |
| MsG0180003248.01 | MsG0280007937.01 | 0.816424 | 5.570251e-52 | 3.945304e-49 |
| MsG0180003248.01 | MsG0280008405.01 | 0.860035 | 2.734580e-63 | 7.373038e-60 |
| MsG0180003248.01 | MsG0280009167.01 | 0.826641 | 2.427050e-54 | 2.289293e-51 |
| MsG0180003248.01 | MsG0280009742.01 | -0.800836 | 1.195448e-48 | 5.622925e-46 |
| MsG0180003248.01 | MsG0280010410.01 | 0.823793 | 1.143943e-53 | 9.949926e-51 |
| MsG0180003248.01 | MsG0280010802.01 | 0.850590 | 1.538870e-60 | 3.029310e-57 |
| MsG0180003248.01 | MsG0280011042.01 | 0.803070 | 4.153692e-49 | 2.067601e-46 |
| MsG0180003248.01 | MsG0280011165.01 | 0.831671 | 1.462696e-55 | 1.598329e-52 |
| MsG0180003248.01 | MsG0280011193.01 | 0.811087 | 8.344192e-51 | 5.117547e-48 |
| MsG0180003248.01 | MsG0280011203.01 | 0.816025 | 6.841405e-52 | 4.793342e-49 |
| MsG0180003248.01 | MsG0280011236.01 | 0.821363 | 4.201734e-53 | 3.411148e-50 |
| MsG0180003248.01 | MsG0280011238.01 | 0.849063 | 4.111629e-60 | 7.701247e-57 |
| MsG0180003248.01 | MsG0280011267.01 | 0.827539 | 1.479178e-54 | 1.432159e-51 |
| MsG0180003248.01 | MsG0380011613.01 | 0.861650 | 8.841548e-64 | 2.519271e-60 |
| MsG0180003248.01 | MsG0380011635.01 | 0.827246 | 1.739441e-54 | 1.669955e-51 |
| MsG0180003248.01 | MsG0380011968.01 | 0.814311 | 1.643495e-51 | 1.099032e-48 |
| MsG0180003248.01 | MsG0380011974.01 | 0.843826 | 1.103407e-58 | 1.747565e-55 |
| MsG0180003248.01 | MsG0380012654.01 | 0.824567 | 7.527093e-54 | 6.692543e-51 |
| MsG0180003248.01 | MsG0380013272.01 | 0.837810 | 4.173291e-57 | 5.483745e-54 |
| MsG0180003248.01 | MsG0380013278.01 | 0.828112 | 1.077604e-54 | 1.061012e-51 |
| MsG0180003248.01 | MsG0380013300.01 | 0.843185 | 1.636685e-58 | 2.540212e-55 |
| MsG0180003248.01 | MsG0380013452.01 | 0.810398 | 1.175625e-50 | 7.078732e-48 |
| MsG0180003248.01 | MsG0380014639.01 | -0.806086 | 9.756806e-50 | 5.248434e-47 |
| MsG0180003248.01 | MsG0380014735.01 | -0.813459 | 2.532874e-51 | 1.655133e-48 |
| MsG0180003248.01 | MsG0380015323.01 | 0.812415 | 4.289879e-51 | 2.726017e-48 |
| MsG0180003248.01 | MsG0380015369.01 | 0.805264 | 1.451551e-49 | 7.644960e-47 |
| MsG0180003248.01 | MsG0380015572.01 | 0.842387 | 2.666791e-58 | 4.037345e-55 |
| MsG0180003248.01 | MsG0380016801.01 | 0.800784 | 1.224860e-48 | 5.753413e-46 |
| MsG0180003248.01 | MsG0380016839.01 | 0.845253 | 4.558729e-59 | 7.552196e-56 |
| MsG0180003248.01 | MsG0380016862.01 | 0.800716 | 1.265110e-48 | 5.932122e-46 |
| MsG0180003248.01 | MsG0380016935.01 | -0.823176 | 1.594594e-53 | 1.362901e-50 |
| MsG0180003248.01 | MsG0380017151.01 | 0.853538 | 2.236243e-61 | 4.848198e-58 |
| MsG0180003248.01 | MsG0380017405.01 | -0.822365 | 2.463032e-53 | 2.057468e-50 |
| MsG0180003248.01 | MsG0380017690.01 | 0.843414 | 1.422284e-58 | 2.223717e-55 |
| MsG0180003248.01 | MsG0380017754.01 | 0.845980 | 2.893671e-59 | 4.908042e-56 |
| MsG0180003248.01 | MsG0480018440.01 | 0.804586 | 2.011908e-49 | 1.041302e-46 |
| MsG0180003248.01 | MsG0480018563.01 | 0.835441 | 1.674606e-56 | 2.048002e-53 |
| MsG0180003248.01 | MsG0480019105.01 | 0.804264 | 2.348182e-49 | 1.205295e-46 |
| MsG0180003248.01 | MsG0480019146.01 | 0.801838 | 7.454380e-49 | 3.596236e-46 |
| MsG0180003248.01 | MsG0480019217.01 | 0.816762 | 4.679371e-52 | 3.345260e-49 |
| MsG0180003248.01 | MsG0480019726.01 | 0.807360 | 5.250868e-50 | 2.918691e-47 |
| MsG0180003248.01 | MsG0480019842.01 | 0.826781 | 2.246932e-54 | 2.127883e-51 |
| MsG0180003248.01 | MsG0480020497.01 | 0.815986 | 6.979132e-52 | 4.884588e-49 |
| MsG0180003248.01 | MsG0480020722.01 | 0.802819 | 4.682002e-49 | 2.315970e-46 |
| MsG0180003248.01 | MsG0480021327.01 | -0.800898 | 1.161046e-48 | 5.469902e-46 |
| MsG0180003248.01 | MsG0480021361.01 | 0.809475 | 1.857984e-50 | 1.091925e-47 |
| MsG0180003248.01 | MsG0480021433.01 | 0.804305 | 2.302897e-49 | 1.183315e-46 |
| MsG0180003248.01 | MsG0480021697.01 | 0.808743 | 2.665152e-50 | 1.536005e-47 |
| MsG0180003248.01 | MsG0480022309.01 | 0.820057 | 8.384992e-53 | 6.565459e-50 |
| MsG0180003248.01 | MsG0480022310.01 | 0.833873 | 4.151531e-56 | 4.844228e-53 |
| MsG0180003248.01 | MsG0480022428.01 | 0.812275 | 4.601793e-51 | 2.913241e-48 |
| MsG0180003248.01 | MsG0480022638.01 | 0.805933 | 1.050805e-49 | 5.630585e-47 |
| MsG0180003248.01 | MsG0480022735.01 | 0.846017 | 2.828286e-59 | 4.802569e-56 |
| MsG0180003248.01 | MsG0480022736.01 | 0.833022 | 6.770378e-56 | 7.700862e-53 |
| MsG0180003248.01 | MsG0480022833.01 | 0.819250 | 1.281941e-52 | 9.813360e-50 |
| MsG0180003248.01 | MsG0480023107.01 | 0.864336 | 1.308065e-64 | 4.092270e-61 |
| MsG0180003248.01 | MsG0480023152.01 | -0.802593 | 5.213123e-49 | 2.563759e-46 |
| MsG0180003248.01 | MsG0480023349.01 | 0.864246 | 1.396291e-64 | 4.354559e-61 |
| MsG0180003248.01 | MsG0480023658.01 | 0.843131 | 1.691880e-58 | 2.621275e-55 |
| MsG0180003248.01 | MsG0580024087.01 | 0.801737 | 7.818058e-49 | 3.761782e-46 |
| MsG0180003248.01 | MsG0580024176.01 | 0.804215 | 2.404302e-49 | 1.232531e-46 |
| MsG0180003248.01 | MsG0580024207.01 | 0.800252 | 1.572755e-48 | 7.288682e-46 |
| MsG0180003248.01 | MsG0580024218.01 | 0.867280 | 1.537837e-65 | 5.338520e-62 |
| MsG0180003248.01 | MsG0580024219.01 | 0.821679 | 3.552061e-53 | 2.909451e-50 |
| MsG0180003248.01 | MsG0580024220.01 | 0.825318 | 5.005582e-54 | 4.547016e-51 |
| MsG0180003248.01 | MsG0580024408.01 | 0.843078 | 1.748108e-58 | 2.703813e-55 |
| MsG0180003248.01 | MsG0580024990.01 | 0.814909 | 1.211991e-51 | 8.235773e-49 |
| MsG0180003248.01 | MsG0580025431.01 | 0.830699 | 2.534534e-55 | 2.691019e-52 |
| MsG0180003248.01 | MsG0580025507.01 | 0.815167 | 1.061919e-51 | 7.266740e-49 |
| MsG0180003248.01 | MsG0580025586.01 | 0.805344 | 1.397027e-49 | 7.373077e-47 |
| MsG0180003248.01 | MsG0580025590.01 | 0.801348 | 9.393069e-49 | 4.475670e-46 |
| MsG0180003248.01 | MsG0580025682.01 | 0.849094 | 4.030580e-60 | 7.556789e-57 |
| MsG0180003248.01 | MsG0580025870.01 | 0.825846 | 3.751391e-54 | 3.459608e-51 |
| MsG0180003248.01 | MsG0580026162.01 | 0.842956 | 1.883333e-58 | 2.901972e-55 |
| MsG0180003248.01 | MsG0580027337.01 | 0.802486 | 5.483289e-49 | 2.689227e-46 |
| MsG0180003248.01 | MsG0580027638.01 | 0.838118 | 3.477435e-57 | 4.612099e-54 |
| MsG0180003248.01 | MsG0580027646.01 | 0.821318 | 4.302779e-53 | 3.488851e-50 |
| MsG0180003248.01 | MsG0580028490.01 | 0.806720 | 7.171579e-50 | 3.920800e-47 |
| MsG0180003248.01 | MsG0580028999.01 | 0.809588 | 1.757030e-50 | 1.035783e-47 |
| MsG0180003248.01 | MsG0580029296.01 | 0.842671 | 2.242814e-58 | 3.425167e-55 |
| MsG0180003248.01 | MsG0580029626.01 | 0.814479 | 1.508598e-51 | 1.013430e-48 |
| MsG0180003248.01 | MsG0580029782.01 | 0.804615 | 1.983808e-49 | 1.027522e-46 |
| MsG0180003248.01 | MsG0580030133.01 | 0.839909 | 1.195308e-57 | 1.674939e-54 |
| MsG0180003248.01 | MsG0580030135.01 | 0.817870 | 2.635042e-52 | 1.941834e-49 |
| MsG0180003248.01 | MsG0580030145.01 | 0.841113 | 5.784454e-58 | 8.413128e-55 |
| MsG0180003248.01 | MsG0680030635.01 | -0.804930 | 1.705648e-49 | 8.907328e-47 |
| MsG0180003248.01 | MsG0680030960.01 | 0.823341 | 1.459639e-53 | 1.253265e-50 |
| MsG0180003248.01 | MsG0680031009.01 | 0.831232 | 1.875681e-55 | 2.022952e-52 |
| MsG0180003248.01 | MsG0680033754.01 | 0.828291 | 9.753417e-55 | 9.652811e-52 |
| MsG0180003248.01 | MsG0680034418.01 | 0.800832 | 1.198020e-48 | 5.634309e-46 |
| MsG0180003248.01 | MsG0680034728.01 | 0.805293 | 1.431318e-49 | 7.544347e-47 |
| MsG0180003248.01 | MsG0680035584.01 | -0.812893 | 3.370648e-51 | 2.168934e-48 |
| MsG0180003248.01 | MsG0680035841.01 | 0.816706 | 4.815266e-52 | 3.437043e-49 |
| MsG0180003248.01 | MsG0780035953.01 | 0.838963 | 2.103975e-57 | 2.863406e-54 |
| MsG0180003248.01 | MsG0780036199.01 | 0.809955 | 1.465271e-50 | 8.721590e-48 |
| MsG0180003248.01 | MsG0780036661.01 | 0.843895 | 1.057298e-58 | 1.678366e-55 |
| MsG0180003248.01 | MsG0780036839.01 | 0.817883 | 2.616750e-52 | 1.929045e-49 |
| MsG0180003248.01 | MsG0780036959.01 | 0.826222 | 3.054135e-54 | 2.846632e-51 |
| MsG0180003248.01 | MsG0780036960.01 | 0.827023 | 1.966632e-54 | 1.875687e-51 |
| MsG0180003248.01 | MsG0780037182.01 | 0.828663 | 7.930619e-55 | 7.934372e-52 |
| MsG0180003248.01 | MsG0780038519.01 | 0.820219 | 7.699744e-53 | 6.055453e-50 |
| MsG0180003248.01 | MsG0780038860.01 | 0.834563 | 2.788671e-56 | 3.321894e-53 |
| MsG0180003248.01 | MsG0780038922.01 | 0.814410 | 1.562405e-51 | 1.047653e-48 |
| MsG0180003248.01 | MsG0780038924.01 | 0.806980 | 6.321310e-50 | 3.479161e-47 |
| MsG0180003248.01 | MsG0780038939.01 | 0.846306 | 2.359848e-59 | 4.044057e-56 |
| MsG0180003248.01 | MsG0780039190.01 | 0.809900 | 1.505515e-50 | 8.947995e-48 |
| MsG0180003248.01 | MsG0780039287.01 | -0.803657 | 3.139722e-49 | 1.586646e-46 |
| MsG0180003248.01 | MsG0780039576.01 | 0.854727 | 1.015156e-61 | 2.288909e-58 |
| MsG0180003248.01 | MsG0780039839.01 | -0.819681 | 1.022239e-52 | 7.919786e-50 |
| MsG0180003248.01 | MsG0780039855.01 | 0.806857 | 6.709477e-50 | 3.681203e-47 |
| MsG0180003248.01 | MsG0780039925.01 | 0.811662 | 6.259295e-51 | 3.897240e-48 |
| MsG0180003248.01 | MsG0780039968.01 | 0.841600 | 4.307666e-58 | 6.361883e-55 |
| MsG0180003248.01 | MsG0780039978.01 | 0.815417 | 9.344149e-52 | 6.438486e-49 |
| MsG0180003248.01 | MsG0780039979.01 | 0.835406 | 1.709124e-56 | 2.088094e-53 |
| MsG0180003248.01 | MsG0780040181.01 | 0.850325 | 1.826547e-60 | 3.564665e-57 |
| MsG0180003248.01 | MsG0780040497.01 | 0.811979 | 5.340194e-51 | 3.353403e-48 |
| MsG0180003248.01 | MsG0780040805.01 | 0.819802 | 9.593111e-53 | 7.457878e-50 |
| MsG0180003248.01 | MsG0780040806.01 | 0.833138 | 6.335342e-56 | 7.231298e-53 |
| MsG0180003248.01 | MsG0780040977.01 | 0.803925 | 2.762028e-49 | 1.405578e-46 |
| MsG0180003248.01 | MsG0780041176.01 | 0.813642 | 2.307762e-51 | 1.515463e-48 |
| MsG0180003248.01 | MsG0780041180.01 | 0.838964 | 2.102646e-57 | 2.861677e-54 |
| MsG0180003248.01 | MsG0780041299.01 | 0.850284 | 1.875225e-60 | 3.654754e-57 |
| MsG0180003248.01 | MsG0780041316.01 | 0.866744 | 2.279732e-65 | 7.768078e-62 |
| MsG0180003248.01 | MsG0780041317.01 | 0.816156 | 6.393411e-52 | 4.495612e-49 |
| MsG0180003248.01 | MsG0780041556.01 | 0.836909 | 7.098152e-57 | 9.072776e-54 |
| MsG0180003248.01 | MsG0780041574.01 | 0.831191 | 1.920355e-55 | 2.068623e-52 |
| MsG0180003248.01 | MsG0780041783.01 | -0.805607 | 1.230165e-49 | 6.536474e-47 |
| MsG0180003248.01 | MsG0880042122.01 | 0.822319 | 2.525067e-53 | 2.106342e-50 |
| MsG0180003248.01 | MsG0880042591.01 | 0.847722 | 9.658915e-60 | 1.732439e-56 |
| MsG0180003248.01 | MsG0880042740.01 | 0.859121 | 5.147570e-63 | 1.344510e-59 |
| MsG0180003248.01 | MsG0880042810.01 | 0.849560 | 2.989422e-60 | 5.689107e-57 |
| MsG0180003248.01 | MsG0880043109.01 | 0.804121 | 2.515361e-49 | 1.286421e-46 |
| MsG0180003248.01 | MsG0880043212.01 | 0.819449 | 1.154712e-52 | 8.888787e-50 |
| MsG0180003248.01 | MsG0880043364.01 | 0.824541 | 7.633293e-54 | 6.781549e-51 |
| MsG0180003248.01 | MsG0880043481.01 | 0.856500 | 3.084801e-62 | 7.379165e-59 |
| MsG0180003248.01 | MsG0880043828.01 | 0.827991 | 1.152168e-54 | 1.130439e-51 |
| MsG0180003248.01 | MsG0880045385.01 | -0.808252 | 3.392605e-50 | 1.930455e-47 |
| MsG0180003248.01 | MsG0880045477.01 | 0.825816 | 3.814581e-54 | 3.514670e-51 |
| MsG0180003248.01 | MsG0880045677.01 | 0.851334 | 9.496702e-61 | 1.915933e-57 |
| MsG0180003248.01 | MsG0880045968.01 | -0.800598 | 1.337035e-48 | 6.250901e-46 |
| MsG0180003248.01 | MsG0880046095.01 | 0.803358 | 3.621859e-49 | 1.816238e-46 |
| MsG0180003248.01 | MsG0880046308.01 | 0.804069 | 2.577634e-49 | 1.316583e-46 |
| MsG0180003248.01 | MsG0880046429.01 | 0.841635 | 4.216796e-58 | 6.234220e-55 |
| MsG0180003248.01 | MsG0880046863.01 | 0.848693 | 5.208337e-60 | 9.638055e-57 |
| MsG0180003248.01 | MsG0880047486.01 | 0.806576 | 7.694006e-50 | 4.190724e-47 |
| MsG0180003248.01 | MsG0880047500.01 | 0.820975 | 5.162788e-53 | 4.146893e-50 |
| MsG0180003248.01 | MsG0880047665.01 | 0.824466 | 7.948433e-54 | 7.045725e-51 |
| MsG0180003248.01 | MsG0880047714.01 | 0.844520 | 7.184889e-59 | 1.162970e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003248.01.T01 | MTR_1g056880 | 95.000 | 440 | 19 | 1 | 1 | 440 | 1 | 437 | 0.0 | 835 |
| MsG0180003248.01.T01 | MTR_1g056870 | 93.182 | 440 | 27 | 1 | 1 | 440 | 1 | 437 | 0.0 | 818 |
| MsG0180003248.01.T01 | MTR_1g056840 | 88.182 | 440 | 23 | 2 | 1 | 440 | 1 | 411 | 0.0 | 768 |
| MsG0180003248.01.T01 | MTR_7g106340 | 63.554 | 439 | 137 | 7 | 1 | 437 | 1 | 418 | 0.0 | 535 |
| MsG0180003248.01.T01 | MTR_2g087350 | 54.483 | 435 | 163 | 6 | 4 | 437 | 3 | 403 | 3.60e-148 | 427 |
| MsG0180003248.01.T01 | MTR_1g056910 | 40.371 | 431 | 218 | 8 | 4 | 429 | 3 | 399 | 1.34e-102 | 311 |
| MsG0180003248.01.T01 | MTR_4g051515 | 36.591 | 440 | 241 | 8 | 4 | 436 | 3 | 411 | 1.11e-89 | 278 |
| MsG0180003248.01.T01 | MTR_3g065080 | 33.260 | 454 | 234 | 13 | 3 | 436 | 32 | 436 | 1.39e-59 | 201 |
| MsG0180003248.01.T01 | MTR_5g077510 | 32.644 | 435 | 245 | 15 | 4 | 428 | 32 | 428 | 5.10e-52 | 181 |
| MsG0180003248.01.T01 | MTR_5g048050 | 31.075 | 428 | 251 | 11 | 2 | 417 | 20 | 415 | 4.04e-51 | 179 |
| MsG0180003248.01.T01 | MTR_6g071340 | 30.476 | 420 | 246 | 11 | 11 | 417 | 9 | 395 | 2.43e-50 | 176 |
| MsG0180003248.01.T01 | MTR_4g085720 | 31.148 | 427 | 248 | 11 | 1 | 422 | 8 | 393 | 5.46e-45 | 161 |
| MsG0180003248.01.T01 | MTR_8g092870 | 28.507 | 442 | 269 | 13 | 5 | 430 | 8 | 418 | 3.44e-32 | 127 |
| MsG0180003248.01.T01 | MTR_3g095730 | 28.285 | 449 | 259 | 15 | 5 | 430 | 11 | 419 | 2.94e-28 | 115 |
| MsG0180003248.01.T01 | MTR_4g063800 | 24.766 | 428 | 265 | 13 | 11 | 429 | 259 | 638 | 7.00e-25 | 107 |
| MsG0180003248.01.T01 | MTR_3g096370 | 25.995 | 427 | 272 | 13 | 4 | 422 | 7 | 397 | 1.13e-24 | 105 |
| MsG0180003248.01.T01 | MTR_7g059405 | 26.290 | 407 | 257 | 13 | 11 | 417 | 268 | 631 | 8.41e-24 | 104 |
| MsG0180003248.01.T01 | MTR_4g485520 | 28.302 | 318 | 167 | 9 | 11 | 314 | 109 | 379 | 2.41e-23 | 102 |
| MsG0180003248.01.T01 | MTR_5g083030 | 25.225 | 444 | 255 | 15 | 11 | 426 | 297 | 691 | 3.64e-23 | 102 |
| MsG0180003248.01.T01 | MTR_4g485520 | 28.302 | 318 | 167 | 9 | 11 | 314 | 277 | 547 | 4.11e-23 | 102 |
| MsG0180003248.01.T01 | MTR_2g018010 | 29.814 | 322 | 160 | 11 | 11 | 312 | 296 | 571 | 5.36e-23 | 102 |
| MsG0180003248.01.T01 | MTR_7g078330 | 30.325 | 277 | 167 | 10 | 11 | 273 | 278 | 542 | 1.63e-22 | 100 |
| MsG0180003248.01.T01 | MTR_5g015210 | 25.238 | 420 | 267 | 9 | 6 | 425 | 66 | 438 | 4.60e-22 | 98.6 |
| MsG0180003248.01.T01 | MTR_4g107010 | 27.536 | 414 | 258 | 17 | 11 | 417 | 284 | 662 | 1.81e-20 | 94.7 |
| MsG0180003248.01.T01 | MTR_3g085610 | 25.586 | 469 | 281 | 18 | 13 | 440 | 286 | 727 | 6.06e-20 | 93.2 |
| MsG0180003248.01.T01 | MTR_1g094215 | 28.235 | 340 | 184 | 13 | 11 | 338 | 68 | 359 | 2.59e-19 | 90.1 |
| MsG0180003248.01.T01 | MTR_1g094215 | 28.235 | 340 | 184 | 13 | 11 | 338 | 251 | 542 | 6.83e-19 | 89.7 |
| MsG0180003248.01.T01 | MTR_8g080280 | 28.035 | 453 | 245 | 23 | 13 | 417 | 288 | 707 | 7.27e-19 | 89.7 |
| MsG0180003248.01.T01 | MTR_3g078160 | 26.859 | 417 | 255 | 18 | 11 | 417 | 279 | 655 | 1.39e-18 | 89.0 |
| MsG0180003248.01.T01 | MTR_3g078160 | 26.859 | 417 | 255 | 18 | 11 | 417 | 279 | 655 | 1.55e-18 | 88.6 |
| MsG0180003248.01.T01 | MTR_4g028960 | 35.417 | 192 | 87 | 9 | 2 | 168 | 273 | 452 | 1.87e-18 | 88.6 |
| MsG0180003248.01.T01 | MTR_5g034440 | 26.902 | 368 | 235 | 13 | 11 | 374 | 284 | 621 | 2.74e-17 | 84.7 |
| MsG0180003248.01.T01 | MTR_4g091880 | 26.406 | 409 | 247 | 13 | 11 | 417 | 9 | 365 | 4.69e-17 | 82.8 |
| MsG0180003248.01.T01 | MTR_7g097020 | 48.750 | 80 | 35 | 3 | 5 | 84 | 239 | 312 | 6.27e-16 | 80.9 |
| MsG0180003248.01.T01 | MTR_7g053260 | 43.038 | 79 | 39 | 2 | 1 | 79 | 72 | 144 | 6.96e-16 | 79.7 |
| MsG0180003248.01.T01 | MTR_7g116600 | 46.237 | 93 | 40 | 4 | 11 | 103 | 82 | 164 | 7.79e-16 | 79.7 |
| MsG0180003248.01.T01 | MTR_1g017770 | 51.351 | 74 | 30 | 2 | 6 | 79 | 44 | 111 | 3.18e-15 | 77.8 |
| MsG0180003248.01.T01 | MTR_1g069845 | 48.611 | 72 | 31 | 2 | 9 | 80 | 126 | 191 | 6.06e-15 | 77.4 |
| MsG0180003248.01.T01 | MTR_1g069845 | 46.053 | 76 | 35 | 2 | 5 | 80 | 243 | 312 | 9.31e-15 | 77.0 |
| MsG0180003248.01.T01 | MTR_8g077205 | 44.565 | 92 | 39 | 4 | 5 | 94 | 159 | 240 | 1.01e-14 | 76.6 |
| MsG0180003248.01.T01 | MTR_1g069845 | 46.053 | 76 | 35 | 2 | 5 | 80 | 239 | 308 | 1.03e-14 | 77.0 |
| MsG0180003248.01.T01 | MTR_3g115670 | 26.415 | 212 | 119 | 6 | 11 | 206 | 34 | 224 | 1.03e-14 | 77.0 |
| MsG0180003248.01.T01 | MTR_8g077205 | 44.565 | 92 | 39 | 4 | 5 | 94 | 271 | 352 | 1.32e-14 | 76.6 |
| MsG0180003248.01.T01 | MTR_4g091880 | 24.694 | 409 | 226 | 13 | 11 | 417 | 9 | 337 | 1.78e-14 | 74.7 |
| MsG0180003248.01.T01 | MTR_2g011140 | 26.183 | 317 | 191 | 8 | 13 | 329 | 21 | 294 | 2.23e-14 | 74.7 |
| MsG0180003248.01.T01 | MTR_3g078160 | 47.778 | 90 | 40 | 4 | 11 | 99 | 279 | 362 | 6.85e-14 | 73.9 |
| MsG0180003248.01.T01 | MTR_5g020570 | 43.299 | 97 | 41 | 6 | 1 | 94 | 265 | 350 | 1.35e-13 | 73.6 |
| MsG0180003248.01.T01 | MTR_5g020570 | 43.299 | 97 | 41 | 6 | 1 | 94 | 280 | 365 | 1.73e-13 | 73.2 |
| MsG0180003248.01.T01 | MTR_8g103227 | 39.773 | 88 | 40 | 3 | 11 | 98 | 399 | 473 | 4.74e-13 | 72.0 |
| MsG0180003248.01.T01 | MTR_1g079450 | 40.000 | 90 | 44 | 4 | 5 | 94 | 61 | 140 | 1.22e-12 | 69.7 |
| MsG0180003248.01.T01 | MTR_1g090320 | 43.836 | 73 | 36 | 2 | 11 | 83 | 517 | 584 | 1.29e-12 | 70.5 |
| MsG0180003248.01.T01 | MTR_1g090320 | 43.836 | 73 | 36 | 2 | 11 | 83 | 519 | 586 | 1.32e-12 | 70.5 |
| MsG0180003248.01.T01 | MTR_3g466220 | 42.169 | 83 | 42 | 2 | 2 | 84 | 228 | 304 | 2.11e-12 | 69.7 |
| MsG0180003248.01.T01 | MTR_3g466220 | 42.169 | 83 | 42 | 2 | 2 | 84 | 207 | 283 | 2.23e-12 | 69.7 |
| MsG0180003248.01.T01 | MTR_7g117890 | 40.964 | 83 | 43 | 2 | 2 | 84 | 250 | 326 | 2.60e-11 | 66.2 |
| MsG0180003248.01.T01 | MTR_5g032010 | 38.750 | 80 | 43 | 2 | 6 | 85 | 731 | 804 | 2.94e-11 | 66.2 |
| MsG0180003248.01.T01 | MTR_1g093995 | 45.714 | 70 | 29 | 3 | 20 | 89 | 1 | 61 | 5.81e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180003248.01.T01 | AT3G52450 | 53.047 | 443 | 193 | 6 | 1 | 437 | 1 | 434 | 8.30e-153 | 441 |
| MsG0180003248.01.T01 | AT2G35930 | 50.340 | 441 | 179 | 6 | 1 | 437 | 6 | 410 | 4.34e-151 | 435 |
| MsG0180003248.01.T01 | AT3G11840 | 35.608 | 469 | 235 | 11 | 3 | 434 | 6 | 444 | 1.28e-79 | 254 |
| MsG0180003248.01.T01 | AT3G19380 | 33.256 | 430 | 242 | 9 | 1 | 422 | 8 | 400 | 1.37e-49 | 174 |
| MsG0180003248.01.T01 | AT5G37490 | 31.264 | 435 | 249 | 15 | 4 | 428 | 28 | 422 | 2.84e-47 | 168 |
| MsG0180003248.01.T01 | AT1G49780 | 31.222 | 442 | 258 | 11 | 1 | 431 | 8 | 414 | 2.37e-43 | 157 |
| MsG0180003248.01.T01 | AT1G66160 | 30.184 | 434 | 235 | 17 | 2 | 420 | 26 | 406 | 4.87e-42 | 154 |
| MsG0180003248.01.T01 | AT1G66160 | 27.650 | 434 | 230 | 18 | 2 | 420 | 26 | 390 | 1.98e-29 | 119 |
| MsG0180003248.01.T01 | AT5G09800 | 29.291 | 437 | 252 | 16 | 10 | 430 | 14 | 409 | 4.00e-28 | 115 |
| MsG0180003248.01.T01 | AT2G28830 | 27.107 | 439 | 246 | 17 | 2 | 420 | 178 | 562 | 4.82e-27 | 114 |
| MsG0180003248.01.T01 | AT1G23030 | 26.619 | 417 | 249 | 14 | 11 | 421 | 245 | 610 | 3.00e-26 | 112 |
| MsG0180003248.01.T01 | AT3G18710 | 26.991 | 452 | 258 | 13 | 5 | 430 | 10 | 415 | 4.64e-25 | 107 |
| MsG0180003248.01.T01 | AT5G42340 | 35.928 | 167 | 99 | 4 | 11 | 177 | 294 | 452 | 4.44e-23 | 102 |
| MsG0180003248.01.T01 | AT3G54850 | 29.814 | 322 | 158 | 14 | 11 | 315 | 252 | 522 | 8.86e-23 | 101 |
| MsG0180003248.01.T01 | AT1G71020 | 26.824 | 425 | 247 | 14 | 11 | 421 | 99 | 473 | 2.85e-22 | 99.4 |
| MsG0180003248.01.T01 | AT3G46510 | 24.828 | 435 | 256 | 15 | 2 | 420 | 250 | 629 | 3.38e-22 | 99.8 |
| MsG0180003248.01.T01 | AT1G71020 | 26.824 | 425 | 247 | 14 | 11 | 421 | 247 | 621 | 4.75e-22 | 99.4 |
| MsG0180003248.01.T01 | AT1G67530 | 26.932 | 453 | 257 | 16 | 13 | 417 | 278 | 704 | 9.44e-22 | 98.6 |
| MsG0180003248.01.T01 | AT1G67530 | 26.932 | 453 | 257 | 16 | 13 | 417 | 278 | 704 | 9.44e-22 | 98.6 |
| MsG0180003248.01.T01 | AT1G67530 | 26.932 | 453 | 257 | 16 | 13 | 417 | 278 | 704 | 9.44e-22 | 98.6 |
| MsG0180003248.01.T01 | AT5G64660 | 25.785 | 446 | 278 | 14 | 5 | 430 | 8 | 420 | 2.83e-21 | 95.9 |
| MsG0180003248.01.T01 | AT5G65920 | 23.810 | 420 | 273 | 10 | 6 | 425 | 59 | 431 | 4.80e-20 | 92.4 |
| MsG0180003248.01.T01 | AT5G65920 | 23.810 | 420 | 273 | 10 | 6 | 425 | 59 | 431 | 4.80e-20 | 92.4 |
| MsG0180003248.01.T01 | AT3G49810 | 23.877 | 423 | 275 | 9 | 6 | 428 | 63 | 438 | 8.02e-20 | 92.0 |
| MsG0180003248.01.T01 | AT1G29340 | 26.708 | 322 | 181 | 9 | 5 | 312 | 303 | 583 | 2.39e-18 | 88.2 |
| MsG0180003248.01.T01 | AT1G24330 | 24.434 | 442 | 278 | 16 | 13 | 417 | 281 | 703 | 4.68e-18 | 87.4 |
| MsG0180003248.01.T01 | AT1G24330 | 24.434 | 442 | 278 | 16 | 13 | 417 | 281 | 703 | 4.68e-18 | 87.4 |
| MsG0180003248.01.T01 | AT5G01830 | 26.045 | 311 | 181 | 8 | 4 | 307 | 271 | 539 | 9.46e-18 | 86.3 |
| MsG0180003248.01.T01 | AT1G27910 | 26.818 | 440 | 264 | 19 | 13 | 417 | 285 | 701 | 1.39e-17 | 85.9 |
| MsG0180003248.01.T01 | AT1G67530 | 48.889 | 90 | 35 | 4 | 13 | 102 | 278 | 356 | 1.74e-17 | 85.1 |
| MsG0180003248.01.T01 | AT1G10560 | 25.159 | 314 | 183 | 11 | 11 | 312 | 292 | 565 | 7.20e-17 | 83.6 |
| MsG0180003248.01.T01 | AT4G21350 | 25.062 | 403 | 249 | 12 | 11 | 411 | 9 | 360 | 1.93e-15 | 78.2 |
| MsG0180003248.01.T01 | AT3G07360 | 50.000 | 74 | 31 | 2 | 11 | 84 | 78 | 145 | 4.85e-15 | 77.4 |
| MsG0180003248.01.T01 | AT3G54790 | 45.679 | 81 | 38 | 3 | 3 | 83 | 198 | 272 | 1.02e-13 | 73.9 |
| MsG0180003248.01.T01 | AT3G54790 | 45.679 | 81 | 38 | 3 | 3 | 83 | 234 | 308 | 1.31e-13 | 73.6 |
| MsG0180003248.01.T01 | AT3G54790 | 45.679 | 81 | 38 | 3 | 3 | 83 | 234 | 308 | 1.31e-13 | 73.6 |
| MsG0180003248.01.T01 | AT3G02840 | 24.355 | 349 | 219 | 10 | 82 | 416 | 34 | 351 | 1.84e-13 | 72.0 |
| MsG0180003248.01.T01 | AT2G23140 | 38.776 | 98 | 50 | 3 | 11 | 108 | 237 | 324 | 1.88e-13 | 73.2 |
| MsG0180003248.01.T01 | AT1G60190 | 24.507 | 355 | 212 | 14 | 13 | 353 | 284 | 596 | 1.93e-13 | 72.8 |
| MsG0180003248.01.T01 | AT2G23140 | 38.776 | 98 | 50 | 3 | 11 | 108 | 234 | 321 | 1.96e-13 | 73.2 |
| MsG0180003248.01.T01 | AT2G23140 | 38.776 | 98 | 50 | 3 | 11 | 108 | 234 | 321 | 1.96e-13 | 73.2 |
| MsG0180003248.01.T01 | AT2G23140 | 39.175 | 97 | 49 | 3 | 11 | 107 | 45 | 131 | 2.17e-13 | 72.8 |
| MsG0180003248.01.T01 | AT2G23140 | 39.175 | 97 | 49 | 3 | 11 | 107 | 45 | 131 | 2.17e-13 | 72.8 |
| MsG0180003248.01.T01 | AT1G01660 | 40.541 | 74 | 38 | 2 | 11 | 84 | 502 | 569 | 1.10e-11 | 67.4 |
| MsG0180003248.01.T01 | AT1G01660 | 40.541 | 74 | 38 | 2 | 11 | 84 | 501 | 568 | 1.18e-11 | 67.0 |
| MsG0180003248.01.T01 | AT1G68940 | 28.378 | 148 | 81 | 3 | 11 | 155 | 303 | 428 | 2.02e-11 | 66.6 |
| MsG0180003248.01.T01 | AT1G68940 | 28.378 | 148 | 81 | 3 | 11 | 155 | 303 | 428 | 2.06e-11 | 66.6 |
| MsG0180003248.01.T01 | AT1G68940 | 28.378 | 148 | 81 | 3 | 11 | 155 | 250 | 375 | 2.19e-11 | 66.6 |
| MsG0180003248.01.T01 | AT1G01680 | 40.789 | 76 | 39 | 2 | 11 | 86 | 237 | 306 | 2.63e-11 | 64.7 |
| MsG0180003248.01.T01 | AT2G45920 | 40.741 | 81 | 42 | 2 | 6 | 86 | 324 | 398 | 2.91e-11 | 65.5 |
| MsG0180003248.01.T01 | AT5G67340 | 32.540 | 126 | 74 | 4 | 5 | 127 | 238 | 355 | 4.82e-11 | 65.5 |
| MsG0180003248.01.T01 | AT5G67340 | 32.540 | 126 | 74 | 4 | 5 | 127 | 238 | 355 | 4.82e-11 | 65.5 |
| MsG0180003248.01.T01 | AT5G18340 | 39.130 | 92 | 45 | 4 | 5 | 96 | 72 | 152 | 8.65e-11 | 64.3 |
Find 52 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTTGATAGTGGAAATA+AGG | 0.246468 | 1:-59075326 | MsG0180003248.01.T01:CDS |
| TGCACCATGAATTCTTCTTA+TGG | 0.270597 | 1:-59076285 | MsG0180003248.01.T01:CDS |
| TTTAAATTGGCTAGCTTTGA+TGG | 0.280580 | 1:+59075769 | None:intergenic |
| TTCATGAGTTGTAGTGAAAT+AGG | 0.280796 | 1:+59076483 | None:intergenic |
| TATGAAGCAAGTAAATTAAA+AGG | 0.308972 | 1:+59075238 | None:intergenic |
| TTGATGCTTTCTTTGATACT+TGG | 0.318593 | 1:+59075707 | None:intergenic |
| TTAATCCAACTCGTCGAATT+CGG | 0.352326 | 1:-59075667 | MsG0180003248.01.T01:CDS |
| GAAGCCATGTGAGATGATTT+TGG | 0.361012 | 1:-59075569 | MsG0180003248.01.T01:CDS |
| GTGGTGTAACTTCGATATCT+TGG | 0.376999 | 1:+59076517 | None:intergenic |
| TTAAATTGCATTCAAAGTCT+TGG | 0.383883 | 1:-59075279 | MsG0180003248.01.T01:CDS |
| ATGCCTGTTGAGACAGTAAC+TGG | 0.387709 | 1:+59076456 | None:intergenic |
| GATTCCATAAGAAGAATTCA+TGG | 0.398042 | 1:+59076281 | None:intergenic |
| TGAAGAACCAAACAAAGCTT+TGG | 0.407370 | 1:+59075346 | None:intergenic |
| AGAGTAAAAGCAATTGAATC+AGG | 0.420580 | 1:-59075637 | MsG0180003248.01.T01:CDS |
| TGTTGTTCCAAAGCTTTGTT+TGG | 0.427050 | 1:-59075353 | MsG0180003248.01.T01:CDS |
| TCATGAGTTGTAGTGAAATA+GGG | 0.428583 | 1:+59076484 | None:intergenic |
| TTCTTCTTGATTGCAAAGAA+AGG | 0.442698 | 1:-59075591 | MsG0180003248.01.T01:CDS |
| TTCTTCCGAATTCGACGAGT+TGG | 0.445541 | 1:+59075662 | None:intergenic |
| AATTCATGGTGCACCAAGCT+TGG | 0.450350 | 1:+59076295 | None:intergenic |
| TTTGATGATGATGATGTTGA+AGG | 0.466030 | 1:-59076000 | MsG0180003248.01.T01:CDS |
| GATCCAGTTACTGTCTCAAC+AGG | 0.466859 | 1:-59076459 | MsG0180003248.01.T01:CDS |
| AATGAGTTCATTTGCATCAT+GGG | 0.472896 | 1:+59076353 | None:intergenic |
| GTTCAAGAAATGTTGCGAAT+TGG | 0.480063 | 1:-59075376 | MsG0180003248.01.T01:CDS |
| TAATGAGTTCATTTGCATCA+TGG | 0.496501 | 1:+59076352 | None:intergenic |
| TTGGTTCTTCAAGTTGATAG+TGG | 0.510674 | 1:-59075334 | MsG0180003248.01.T01:CDS |
| AGAGTTTGGATAAGTAAATG+AGG | 0.522468 | 1:+59076174 | None:intergenic |
| AGCCTTCGAAGAGTGTGGTT+TGG | 0.523735 | 1:+59076321 | None:intergenic |
| TTCGAAGGCTCATCCAAGCT+TGG | 0.526439 | 1:-59076308 | MsG0180003248.01.T01:CDS |
| ATGTTATGTCAATGTGCTGA+TGG | 0.528834 | 1:-59075535 | MsG0180003248.01.T01:CDS |
| CACCAAACCACACTCTTCGA+AGG | 0.552006 | 1:-59076323 | MsG0180003248.01.T01:CDS |
| GAACTCTTAAGCCATGGATG+TGG | 0.556866 | 1:-59075505 | MsG0180003248.01.T01:CDS |
| ATAAGGCAAAGGAGAAAGCA+AGG | 0.557452 | 1:-59075309 | MsG0180003248.01.T01:CDS |
| ATTCTTCTTATGGAATCGAA+AGG | 0.560631 | 1:-59076275 | MsG0180003248.01.T01:CDS |
| AGATTTGAACTCTTAAGCCA+TGG | 0.566041 | 1:-59075511 | MsG0180003248.01.T01:CDS |
| GGATGAGCCTTCGAAGAGTG+TGG | 0.571429 | 1:+59076316 | None:intergenic |
| TTCGATGCTTTCTCTGTCGT+AGG | 0.572900 | 1:+59076431 | None:intergenic |
| TTCATCTTCATGTTCAACAA+CGG | 0.581699 | 1:-59076040 | MsG0180003248.01.T01:CDS |
| CTGATAATTGAAGACTGTAA+AGG | 0.581818 | 1:+59075929 | None:intergenic |
| TATTTCACTACAACTCATGA+AGG | 0.582520 | 1:-59076481 | MsG0180003248.01.T01:CDS |
| TGATAGTGGAAATAAGGCAA+AGG | 0.584798 | 1:-59075320 | MsG0180003248.01.T01:CDS |
| TGCTAAGAACTCGACTGCAC+CGG | 0.586369 | 1:+59076092 | None:intergenic |
| CTTGCTTCATACCCAACAAG+TGG | 0.595622 | 1:-59075226 | MsG0180003248.01.T01:CDS |
| AGTCTTCAATTATCAGAACA+AGG | 0.612660 | 1:-59075922 | MsG0180003248.01.T01:CDS |
| CAATAGCTAAACCACATCCA+TGG | 0.618916 | 1:+59075494 | None:intergenic |
| CGACGGTGTATCGAATCAGC+CGG | 0.619891 | 1:-59076111 | MsG0180003248.01.T01:CDS |
| CCGTCGATTTGACTCACTCT+CGG | 0.622821 | 1:+59076128 | None:intergenic |
| AAGAATCAGAAGCTTCATTG+AGG | 0.627331 | 1:+59076205 | None:intergenic |
| TAAGGCAAAGGAGAAAGCAA+GGG | 0.629025 | 1:-59075308 | MsG0180003248.01.T01:CDS |
| TTGCTTCATACCCAACAAGT+GGG | 0.654024 | 1:-59075225 | MsG0180003248.01.T01:CDS |
| AGCACCAAAATCATCTCACA+TGG | 0.654659 | 1:+59075565 | None:intergenic |
| CCGAGAGTGAGTCAAATCGA+CGG | 0.693824 | 1:-59076128 | MsG0180003248.01.T01:CDS |
| TGGCTAATGATAGAGCTGTG+AGG | 0.767301 | 1:-59075441 | MsG0180003248.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAAGCAAGTAAATTAAA+AGG | + | Chr1:59076509-59076528 | None:intergenic | 20.0% |
| ! | TTAAATTGCATTCAAAGTCT+TGG | - | Chr1:59076465-59076484 | MsG0180003248.01.T01:CDS | 25.0% |
| !! | TGTTTCAAAGAAGATTTTGA+GGG | - | Chr1:59076271-59076290 | MsG0180003248.01.T01:CDS | 25.0% |
| !! | TTGTTTCAAAGAAGATTTTG+AGG | - | Chr1:59076270-59076289 | MsG0180003248.01.T01:CDS | 25.0% |
| !!! | ATTCTCCATTTTTGAAGTTT+AGG | + | Chr1:59075860-59075879 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTGACTTCAAAAT+AGG | - | Chr1:59075768-59075787 | MsG0180003248.01.T01:CDS | 25.0% |
| !!! | TTTTGAGCTTTTTTAGAGTT+TGG | + | Chr1:59075587-59075606 | None:intergenic | 25.0% |
| AACTAACTCGATGAAAAACT+CGG | + | Chr1:59076003-59076022 | None:intergenic | 30.0% | |
| AATGAGTTCATTTGCATCAT+GGG | + | Chr1:59075394-59075413 | None:intergenic | 30.0% | |
| ACTCTCCTAAACTTCAAAAA+TGG | - | Chr1:59075852-59075871 | MsG0180003248.01.T01:CDS | 30.0% | |
| AGAGTAAAAGCAATTGAATC+AGG | - | Chr1:59076107-59076126 | MsG0180003248.01.T01:CDS | 30.0% | |
| AGAGTTTGGATAAGTAAATG+AGG | + | Chr1:59075573-59075592 | None:intergenic | 30.0% | |
| AGTCTTCAATTATCAGAACA+AGG | - | Chr1:59075822-59075841 | MsG0180003248.01.T01:CDS | 30.0% | |
| ATTCTTCTTATGGAATCGAA+AGG | - | Chr1:59075469-59075488 | MsG0180003248.01.T01:CDS | 30.0% | |
| CTGATAATTGAAGACTGTAA+AGG | + | Chr1:59075818-59075837 | None:intergenic | 30.0% | |
| GAAAAACTCGGTCTTTAAAT+TGG | + | Chr1:59075991-59076010 | None:intergenic | 30.0% | |
| GATTCCATAAGAAGAATTCA+TGG | + | Chr1:59075466-59075485 | None:intergenic | 30.0% | |
| TAATGAGTTCATTTGCATCA+TGG | + | Chr1:59075395-59075414 | None:intergenic | 30.0% | |
| TATTTCACTACAACTCATGA+AGG | - | Chr1:59075263-59075282 | MsG0180003248.01.T01:CDS | 30.0% | |
| TCATGAGTTGTAGTGAAATA+GGG | + | Chr1:59075263-59075282 | None:intergenic | 30.0% | |
| TTCATCTTCATGTTCAACAA+CGG | - | Chr1:59075704-59075723 | MsG0180003248.01.T01:CDS | 30.0% | |
| TTCATGAGTTGTAGTGAAAT+AGG | + | Chr1:59075264-59075283 | None:intergenic | 30.0% | |
| TTCTTCTTGATTGCAAAGAA+AGG | - | Chr1:59076153-59076172 | MsG0180003248.01.T01:CDS | 30.0% | |
| TTGATGCTTTCTTTGATACT+TGG | + | Chr1:59076040-59076059 | None:intergenic | 30.0% | |
| !! | ATTGAGGAGTTTTTCGATAA+GGG | + | Chr1:59075526-59075545 | None:intergenic | 30.0% |
| !! | TCAAGTTGATAGTGGAAATA+AGG | - | Chr1:59076418-59076437 | MsG0180003248.01.T01:CDS | 30.0% |
| !! | TTTAAATTGGCTAGCTTTGA+TGG | + | Chr1:59075978-59075997 | None:intergenic | 30.0% |
| !! | TTTGATGATGATGATGTTGA+AGG | - | Chr1:59075744-59075763 | MsG0180003248.01.T01:CDS | 30.0% |
| AAGAATCAGAAGCTTCATTG+AGG | + | Chr1:59075542-59075561 | None:intergenic | 35.0% | |
| AGATTTGAACTCTTAAGCCA+TGG | - | Chr1:59076233-59076252 | MsG0180003248.01.T01:CDS | 35.0% | |
| ATGTTATGTCAATGTGCTGA+TGG | - | Chr1:59076209-59076228 | MsG0180003248.01.T01:CDS | 35.0% | |
| GTTCAAGAAATGTTGCGAAT+TGG | - | Chr1:59076368-59076387 | MsG0180003248.01.T01:CDS | 35.0% | |
| TGAAGAACCAAACAAAGCTT+TGG | + | Chr1:59076401-59076420 | None:intergenic | 35.0% | |
| TGCACCATGAATTCTTCTTA+TGG | - | Chr1:59075459-59075478 | MsG0180003248.01.T01:CDS | 35.0% | |
| TTAATCCAACTCGTCGAATT+CGG | - | Chr1:59076077-59076096 | MsG0180003248.01.T01:CDS | 35.0% | |
| ! | ATAAGGGTTTTTGTAGTTGG+AGG | + | Chr1:59075510-59075529 | None:intergenic | 35.0% |
| ! | CGAAAAATGGCTCTTTTCAT+CGG | - | Chr1:59075332-59075351 | MsG0180003248.01.T01:CDS | 35.0% |
| ! | GTTTTTGTAGTTGGAGGTTT+TGG | + | Chr1:59075504-59075523 | None:intergenic | 35.0% |
| ! | TCGATAAGGGTTTTTGTAGT+TGG | + | Chr1:59075513-59075532 | None:intergenic | 35.0% |
| !! | ACAGAGAAAGCATCGAAAAA+TGG | - | Chr1:59075319-59075338 | MsG0180003248.01.T01:CDS | 35.0% |
| !! | CATTGAGGAGTTTTTCGATA+AGG | + | Chr1:59075527-59075546 | None:intergenic | 35.0% |
| !! | GATTTTGAGGGTTTCAACAA+TGG | - | Chr1:59076283-59076302 | MsG0180003248.01.T01:CDS | 35.0% |
| !! | TGATAGTGGAAATAAGGCAA+AGG | - | Chr1:59076424-59076443 | MsG0180003248.01.T01:CDS | 35.0% |
| !! | TGTTGTTCCAAAGCTTTGTT+TGG | - | Chr1:59076391-59076410 | MsG0180003248.01.T01:CDS | 35.0% |
| !! | TTGGTTCTTCAAGTTGATAG+TGG | - | Chr1:59076410-59076429 | MsG0180003248.01.T01:CDS | 35.0% |
| !!! | TGAGATGATTTTGGTGCTTT+TGG | - | Chr1:59076184-59076203 | MsG0180003248.01.T01:CDS | 35.0% |
| AGCACCAAAATCATCTCACA+TGG | + | Chr1:59076182-59076201 | None:intergenic | 40.0% | |
| ATAAGGCAAAGGAGAAAGCA+AGG | - | Chr1:59076435-59076454 | MsG0180003248.01.T01:CDS | 40.0% | |
| CAATAGCTAAACCACATCCA+TGG | + | Chr1:59076253-59076272 | None:intergenic | 40.0% | |
| GAAATAGGGCACAGAAAAAG+TGG | + | Chr1:59075249-59075268 | None:intergenic | 40.0% | |
| GTGGTGTAACTTCGATATCT+TGG | + | Chr1:59075230-59075249 | None:intergenic | 40.0% | |
| TAAGGCAAAGGAGAAAGCAA+GGG | - | Chr1:59076436-59076455 | MsG0180003248.01.T01:CDS | 40.0% | |
| TTGCTTCATACCCAACAAGT+GGG | - | Chr1:59076519-59076538 | MsG0180003248.01.T01:CDS | 40.0% | |
| ! | GAAGCCATGTGAGATGATTT+TGG | - | Chr1:59076175-59076194 | MsG0180003248.01.T01:CDS | 40.0% |
| !!! | GTGAGTTGTTGTTTTGTGAC+AGG | + | Chr1:59075372-59075391 | None:intergenic | 40.0% |
| AATTCATGGTGCACCAAGCT+TGG | + | Chr1:59075452-59075471 | None:intergenic | 45.0% | |
| ATGCCTGTTGAGACAGTAAC+TGG | + | Chr1:59075291-59075310 | None:intergenic | 45.0% | |
| CTTGCTTCATACCCAACAAG+TGG | - | Chr1:59076518-59076537 | MsG0180003248.01.T01:CDS | 45.0% | |
| GAACTCTTAAGCCATGGATG+TGG | - | Chr1:59076239-59076258 | MsG0180003248.01.T01:CDS | 45.0% | |
| GATCCAGTTACTGTCTCAAC+AGG | - | Chr1:59075285-59075304 | MsG0180003248.01.T01:CDS | 45.0% | |
| TGGCTAATGATAGAGCTGTG+AGG | - | Chr1:59076303-59076322 | MsG0180003248.01.T01:CDS | 45.0% | |
| TTCGATGCTTTCTCTGTCGT+AGG | + | Chr1:59075316-59075335 | None:intergenic | 45.0% | |
| TTCTTCCGAATTCGACGAGT+TGG | + | Chr1:59076085-59076104 | None:intergenic | 45.0% | |
| !!! | GTAGTTGGAGGTTTTGGAGT+TGG | + | Chr1:59075498-59075517 | None:intergenic | 45.0% |
| CACCAAACCACACTCTTCGA+AGG | - | Chr1:59075421-59075440 | MsG0180003248.01.T01:CDS | 50.0% | |
| CCGAGAGTGAGTCAAATCGA+CGG | - | Chr1:59075616-59075635 | MsG0180003248.01.T01:CDS | 50.0% | |
| TGCTAAGAACTCGACTGCAC+CGG | + | Chr1:59075655-59075674 | None:intergenic | 50.0% | |
| TTCGAAGGCTCATCCAAGCT+TGG | - | Chr1:59075436-59075455 | MsG0180003248.01.T01:CDS | 50.0% | |
| ! | AGCCTTCGAAGAGTGTGGTT+TGG | + | Chr1:59075426-59075445 | None:intergenic | 50.0% |
| !! | CCGTCGATTTGACTCACTCT+CGG | + | Chr1:59075619-59075638 | None:intergenic | 50.0% |
| CGACGGTGTATCGAATCAGC+CGG | - | Chr1:59075633-59075652 | MsG0180003248.01.T01:CDS | 55.0% | |
| GGATGAGCCTTCGAAGAGTG+TGG | + | Chr1:59075431-59075450 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 59075222 | 59076544 | 59075222 | ID=MsG0180003248.01;Name=MsG0180003248.01 |
| Chr1 | mRNA | 59075222 | 59076544 | 59075222 | ID=MsG0180003248.01.T01;Parent=MsG0180003248.01;Name=MsG0180003248.01.T01;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|440 |
| Chr1 | exon | 59075222 | 59076544 | 59075222 | ID=MsG0180003248.01.T01:exon:3881;Parent=MsG0180003248.01.T01 |
| Chr1 | CDS | 59075222 | 59076544 | 59075222 | ID=MsG0180003248.01.T01:cds;Parent=MsG0180003248.01.T01 |
| Gene Sequence |
| Protein sequence |
