AlfalfaGEDB | MsG0780041593.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041593.01

KEGG: K11251
GO: GO:0000786 GO:0003677 GO:0005634 GO:0046982
PFAM: PF00125 PF16211

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041593.01.T01	XP_003626340.1	97.122	139	4	0	1	139	1	139	8.95E-91	269

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041593.01.T01	O65759	95.683	139	6	0	1	139	1	139	4.40E-92	265

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041593.01.T01	A0A396H9E7	97.122	139	4	0	1	139	57	195	2.84e-90	269
MsG0780041593.01.T01	A2Q3H4	97.122	139	4	0	1	139	1	139	4.28e-91	269

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0880046213.01	MsG0780041593.01	PPI
MsG0580029044.01	MsG0780041593.01	PPI
MsG0880044910.01	MsG0780041593.01	PPI
MsG0480021015.01	MsG0780041593.01	PPI
MsG0880042844.01	MsG0780041593.01	PPI
MsG0780039623.01	MsG0780041593.01	PPI
MsG0480022307.01	MsG0780041593.01	PPI
MsG0280007919.01	MsG0780041593.01	PPI
MsG0780041593.01	MsG0280010346.01	PPI
MsG0580025506.01	MsG0780041593.01	PPI
MsG0480021302.01	MsG0780041593.01	PPI
MsG0480021174.01	MsG0780041593.01	PPI
MsG0480020969.01	MsG0780041593.01	PPI
MsG0780041593.01	MsG0380016622.01	PPI
MsG0380012788.01	MsG0780041593.01	PPI
MsG0880045015.01	MsG0780041593.01	PPI
MsG0780041593.01	MsG0780041147.01	PPI
MsG0180000243.01	MsG0780041593.01	PPI
MsG0880046575.01	MsG0780041593.01	PPI
MsG0880044910.01	MsG0780041593.01	PPI
MsG0780041592.01	MsG0780041593.01	PPI
MsG0480020918.01	MsG0780041593.01	PPI
MsG0780037489.01	MsG0780041593.01	PPI
MsG0480023842.01	MsG0780041593.01	PPI
MsG0480021049.01	MsG0780041593.01	PPI
MsG0780041593.01	MsG0480020920.01	PPI
MsG0580025504.01	MsG0780041593.01	PPI
MsG0780038642.01	MsG0780041593.01	PPI
MsG0480021252.01	MsG0780041593.01	PPI
MsG0780041593.01	MsG0780036534.01	PPI
MsG0380016577.01	MsG0780041593.01	PPI
MsG0480020919.01	MsG0780041593.01	PPI
MsG0280006836.01	MsG0780041593.01	PPI
MsG0480020927.01	MsG0780041593.01	PPI
MsG0180006082.01	MsG0780041593.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041593.01.T01	MTR_7g114060	97.122	139	4	0	1	139	1	139	1.08e-94	269
MsG0780041593.01.T01	MTR_7g114040	97.122	139	4	0	1	139	1	139	1.08e-94	269
MsG0780041593.01.T01	MTR_7g108320	95.070	142	4	1	1	139	1	142	3.38e-92	263
MsG0780041593.01.T01	MTR_7g093910	85.401	137	20	0	3	139	6	142	4.18e-82	238
MsG0780041593.01.T01	MTR_7g114050	87.023	131	6	2	9	139	11	130	9.97e-73	213
MsG0780041593.01.T01	MTR_2g082510	87.603	121	11	1	10	126	3	123	6.65e-70	206
MsG0780041593.01.T01	MTR_2g082220	86.290	124	13	1	10	129	3	126	8.19e-70	206
MsG0780041593.01.T01	MTR_2g096610	75.000	120	30	0	18	137	21	140	8.27e-60	181
MsG0780041593.01.T01	MTR_7g113160	76.033	121	25	1	4	124	15	131	3.26e-59	180
MsG0780041593.01.T01	MTR_4g063280	72.441	127	34	1	1	127	1	126	2.53e-58	177
MsG0780041593.01.T01	MTR_8g086640	79.817	109	22	0	19	127	24	132	2.90e-58	177
MsG0780041593.01.T01	MTR_4g064005	79.817	109	22	0	19	127	24	132	4.75e-58	177
MsG0780041593.01.T01	MTR_2g096570	81.132	106	20	0	19	124	23	128	5.05e-58	177
MsG0780041593.01.T01	MTR_4g071150	81.132	106	20	0	19	124	24	129	7.17e-58	177
MsG0780041593.01.T01	MTR_4g064967	81.132	106	20	0	19	124	24	129	1.02e-57	176
MsG0780041593.01.T01	MTR_4g063410	80.189	106	21	0	19	124	24	129	1.97e-57	176
MsG0780041593.01.T01	MTR_6g005150	61.345	119	37	2	19	136	26	136	3.85e-42	136
MsG0780041593.01.T01	MTR_1g011750	63.551	107	37	2	18	123	25	130	1.65e-39	129
MsG0780041593.01.T01	MTR_1g011850	63.551	107	37	2	18	123	25	130	1.65e-39	129
MsG0780041593.01.T01	MTR_1g114050	62.617	107	38	2	20	125	24	129	1.97e-38	127
MsG0780041593.01.T01	MTR_1g071040	63.208	106	37	2	21	125	28	132	4.05e-38	126
MsG0780041593.01.T01	MTR_4g063300	79.730	74	15	0	40	113	10	83	1.03e-35	119
MsG0780041593.01.T01	MTR_4g005910	91.111	45	4	0	82	126	4	48	1.28e-23	87.0
MsG0780041593.01.T01	MTR_7g010440	69.697	66	20	0	73	138	122	187	5.87e-23	91.7
MsG0780041593.01.T01	MTR_4g048490	45.714	105	28	2	19	123	26	101	6.86e-20	79.0
MsG0780041593.01.T01	MTR_1g069770	55.224	67	30	0	62	128	32	98	7.06e-19	76.6
MsG0780041593.01.T01	MTR_7g027610	40.323	124	39	4	6	125	4	96	2.32e-16	70.1
MsG0780041593.01.T01	MTR_0653s0030	40.000	100	35	2	3	102	21	95	2.01e-12	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041593.01.T01	AT1G54690	94.118	136	8	0	4	139	7	142	9.54e-90	257
MsG0780041593.01.T01	AT1G08880	93.382	136	9	0	4	139	7	142	2.37e-89	256
MsG0780041593.01.T01	AT4G27230	87.097	124	12	1	10	129	3	126	1.03e-70	208
MsG0780041593.01.T01	AT4G27230	87.097	124	12	1	10	129	3	126	1.03e-70	208
MsG0780041593.01.T01	AT5G54640	86.290	124	13	1	10	129	3	126	9.68e-70	206
MsG0780041593.01.T01	AT3G20670	85.484	124	14	1	10	129	3	126	1.08e-68	203
MsG0780041593.01.T01	AT1G51060	83.871	124	16	1	10	129	3	126	1.55e-68	203
MsG0780041593.01.T01	AT5G59870	72.308	130	31	2	1	125	1	130	1.62e-60	183
MsG0780041593.01.T01	AT5G27670	70.588	136	34	2	4	137	14	145	1.21e-57	176
MsG0780041593.01.T01	AT5G02560	78.182	110	24	0	18	127	23	132	1.88e-57	176
MsG0780041593.01.T01	AT5G02560	64.179	134	24	1	18	127	23	156	4.66e-52	163
MsG0780041593.01.T01	AT1G52740	57.377	122	43	3	12	125	12	132	7.24e-39	128
MsG0780041593.01.T01	AT2G38810	62.617	107	38	2	18	123	27	132	1.19e-38	127
MsG0780041593.01.T01	AT2G38810	62.617	107	38	2	18	123	27	132	1.19e-38	127
MsG0780041593.01.T01	AT2G38810	62.617	107	38	2	18	123	27	132	1.19e-38	127
MsG0780041593.01.T01	AT2G38810	62.617	107	38	2	18	123	27	132	1.19e-38	127
MsG0780041593.01.T01	AT3G54560	60.952	105	39	2	20	123	29	132	5.02e-37	123
MsG0780041593.01.T01	AT3G54560	60.952	105	39	2	20	123	29	132	5.02e-37	123
MsG0780041593.01.T01	AT4G13570	45.045	111	59	2	8	117	9	118	2.16e-22	85.9
MsG0780041593.01.T01	AT4G13570	49.451	91	44	2	28	117	35	124	9.09e-22	84.3

Find 53 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCAAAGTTTGATGAATAT+TGG	0.233140	7:+92807975	None:intergenic
TTTCCCTTCCCAGCCTTCTT+TGG	0.272919	7:+92807952	None:intergenic
TGAAGAACTCAGCAAGCTTT+TGG	0.286717	7:-92808031	MsG0780041593.01.T01:CDS
TGAAGATCTGGAAACTGATT+TGG	0.302821	7:+92808367	None:intergenic
GGGAAGGGAAAAGGCGAAAT+TGG	0.311073	7:-92807940	MsG0780041593.01.T01:CDS
AACACGTTCGGCGTATTTGC+CGG	0.318153	7:+92808295	None:intergenic
AGCAAAGTTTGATGAATATT+GGG	0.340383	7:+92807976	None:intergenic
AAGTCCGGCCTTTGAAGATC+TGG	0.387108	7:+92808355	None:intergenic
GAAACTGATTTGGAAGCCTT+CGG	0.412102	7:+92808377	None:intergenic
TCAAACTTTGCTGCCAAAGA+AGG	0.417745	7:-92807965	MsG0780041593.01.T01:CDS
ACTTTGCTGCCAAAGAAGGC+TGG	0.417932	7:-92807961	MsG0780041593.01.T01:CDS
AGCTCCGGCACCAACACGTT+CGG	0.444935	7:+92808283	None:intergenic
AAGAAGGCTGGGAAGGGAAA+AGG	0.471306	7:-92807949	MsG0780041593.01.T01:CDS
GAATCATATGACTACAGCTT+TGG	0.474073	7:+92807736	None:intergenic
GGAACTGTGACCATTGCTAA+TGG	0.483635	7:-92808009	MsG0780041593.01.T01:CDS
ACGTGTTGGTGCCGGAGCTC+CGG	0.485122	7:-92808279	MsG0780041593.01.T01:CDS
GGCACATTCAGCTTGCTGTC+AGG	0.491110	7:-92808059	MsG0780041593.01.T01:CDS
CGGCGTATTTGCCGGCCTTG+AGG	0.502918	7:+92808303	None:intergenic
CTGGTACCACCAAGGGAGGA+AGG	0.503740	7:-92808406	MsG0780041593.01.T01:CDS
GGTACCACCAAGGGAGGAAG+GGG	0.506354	7:-92808404	MsG0780041593.01.T01:CDS
CTTTGCTGCCAAAGAAGGCT+GGG	0.509397	7:-92807960	MsG0780041593.01.T01:CDS
GTTTCCAGATCTTCAAAGGC+CGG	0.518477	7:-92808359	MsG0780041593.01.T01:CDS
TCCGACGGGGAATTGAAGTC+CGG	0.524129	7:+92808340	None:intergenic
TACGCCGAACGTGTTGGTGC+CGG	0.525825	7:-92808287	MsG0780041593.01.T01:CDS
GCTGCCAAAGAAGGCTGGGA+AGG	0.531759	7:-92807956	MsG0780041593.01.T01:CDS
AATTGGCTGGGAACGCTGCA+AGG	0.533557	7:-92808110	MsG0780041593.01.T01:CDS
AATTTGAGATTGAAAACTAT+CGG	0.537068	7:+92808467	None:intergenic
ATCGCAAGATTCCTCAAGGC+CGG	0.538535	7:-92808314	MsG0780041593.01.T01:CDS
TGGTACCACCAAGGGAGGAA+GGG	0.539265	7:-92808405	MsG0780041593.01.T01:CDS
ATCAGTTTCCAGATCTTCAA+AGG	0.543380	7:-92808363	MsG0780041593.01.T01:CDS
AGAGAGGTATACCGGAGCTC+CGG	0.548996	7:+92808268	None:intergenic
AGGACCGCAGAGAGGTATAC+CGG	0.559095	7:+92808260	None:intergenic
AATCTTGCGATTCTTCCGAC+GGG	0.559881	7:+92808326	None:intergenic
ATTGGCTGGGAACGCTGCAA+GGG	0.562499	7:-92808109	MsG0780041593.01.T01:CDS
GATTCTGCTGGTACCACCAA+GGG	0.568843	7:-92808413	MsG0780041593.01.T01:CDS
GAATCTTGCGATTCTTCCGA+CGG	0.569168	7:+92808325	None:intergenic
GAATGTGCCTTGGTACAATA+CGG	0.571461	7:+92808073	None:intergenic
CTGCCAAAGAAGGCTGGGAA+GGG	0.583937	7:-92807955	MsG0780041593.01.T01:CDS
GGCAAATACGCCGAACGTGT+TGG	0.584120	7:-92808293	MsG0780041593.01.T01:CDS
ACAGCAAGCTGAATGTGCCT+TGG	0.605047	7:+92808063	None:intergenic
GGGAGGAAGGGGAAAACCGA+AGG	0.611626	7:-92808393	MsG0780041593.01.T01:CDS
AAGAATCGCAAGATTCCTCA+AGG	0.619754	7:-92808318	MsG0780041593.01.T01:CDS
CCTTGAGTATCTCGCTGCTG+AGG	0.632170	7:-92808240	MsG0780041593.01.T01:intron
CCTCAGCAGCGAGATACTCA+AGG	0.638807	7:+92808240	None:intergenic
TCTGCTGGTACCACCAAGGG+AGG	0.639099	7:-92808410	MsG0780041593.01.T01:CDS
CAGAACACCACCATTAGCAA+TGG	0.646082	7:+92807999	None:intergenic
GCCGGACTTCAATTCCCCGT+CGG	0.658042	7:-92808341	MsG0780041593.01.T01:CDS
GGATTCTGCTGGTACCACCA+AGG	0.659312	7:-92808414	MsG0780041593.01.T01:CDS
AGAAGAACCGTATTGTACCA+AGG	0.686303	7:-92808080	MsG0780041593.01.T01:CDS
ACTGTGACCATTGCTAATGG+TGG	0.694716	7:-92808006	MsG0780041593.01.T01:CDS
ATCTTGCGATTCTTCCGACG+GGG	0.695192	7:+92808327	None:intergenic
GATACTCAAGGACCGCAGAG+AGG	0.712819	7:+92808252	None:intergenic
AGCTCCGGTATACCTCTCTG+CGG	0.763589	7:-92808264	MsG0780041593.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTAAACTGTATTTTAATTT+TGG	-	Chr7:92808040-92808059	MsG0780041593.01.T01:CDS	10.0%
!!!	TTAAACTGTATTTTAATTTT+GGG	-	Chr7:92808041-92808060	MsG0780041593.01.T01:CDS	10.0%
!!	AAAATACAGTTTAATCAAAT+TGG	+	Chr7:92808035-92808054	None:intergenic	15.0%
!!!	TATTTTAATTTTGGGTATTT+AGG	-	Chr7:92808049-92808068	MsG0780041593.01.T01:CDS	15.0%
!!!	TCTCTTTTTTGTATAATTTA+GGG	-	Chr7:92808001-92808020	MsG0780041593.01.T01:CDS	15.0%
!!!	AATATTGTTCTTTTCATGAA+TGG	+	Chr7:92808360-92808379	None:intergenic	20.0%
!!!	AATTTGAGATTGAAAACTAT+CGG	+	Chr7:92807724-92807743	None:intergenic	20.0%
!!!	CTCTCTTTTTTGTATAATTT+AGG	-	Chr7:92808000-92808019	MsG0780041593.01.T01:CDS	20.0%
!	AGCAAAGTTTGATGAATATT+GGG	+	Chr7:92808215-92808234	None:intergenic	25.0%
!	ATACAAAAAAGAGAGTGAAA+GGG	+	Chr7:92807995-92808014	None:intergenic	25.0%
!	TATACAAAAAAGAGAGTGAA+AGG	+	Chr7:92807996-92808015	None:intergenic	25.0%
!!!	AATTTTGGGTATTTAGGTTT+TGG	-	Chr7:92808055-92808074	MsG0780041593.01.T01:CDS	25.0%
	CAGCAAAGTTTGATGAATAT+TGG	+	Chr7:92808216-92808235	None:intergenic	30.0%
!	ATCTGCTTCTCAAGAATTTT+AGG	-	Chr7:92808271-92808290	MsG0780041593.01.T01:CDS	30.0%
!	TCTGCTTCTCAAGAATTTTA+GGG	-	Chr7:92808272-92808291	MsG0780041593.01.T01:CDS	30.0%
	ATCAGTTTCCAGATCTTCAA+AGG	-	Chr7:92807825-92807844	MsG0780041593.01.T01:three_prime_UTR	35.0%
	GAATCATATGACTACAGCTT+TGG	+	Chr7:92808455-92808474	None:intergenic	35.0%
	TGAAGATCTGGAAACTGATT+TGG	+	Chr7:92807824-92807843	None:intergenic	35.0%
!	ATCAGAAAAATGGATTCTGC+TGG	-	Chr7:92807763-92807782	MsG0780041593.01.T01:three_prime_UTR	35.0%
!!	GCAGAATCCATTTTTCTGAT+CGG	+	Chr7:92807763-92807782	None:intergenic	35.0%
!!	TCCATTTTTCTGATCGGATT+CGG	+	Chr7:92807757-92807776	None:intergenic	35.0%
!!!	ATTTAGGTTTTGGAATTGGC+TGG	-	Chr7:92808065-92808084	MsG0780041593.01.T01:CDS	35.0%
!!!	GGGTATTTAGGTTTTGGAAT+TGG	-	Chr7:92808061-92808080	MsG0780041593.01.T01:CDS	35.0%
!!!	TTTAGGTTTTGGAATTGGCT+GGG	-	Chr7:92808066-92808085	MsG0780041593.01.T01:CDS	35.0%
	AAGAATCGCAAGATTCCTCA+AGG	-	Chr7:92807870-92807889	MsG0780041593.01.T01:three_prime_UTR	40.0%
	AGAAGAACCGTATTGTACCA+AGG	-	Chr7:92808108-92808127	MsG0780041593.01.T01:CDS	40.0%
	CTGATCGGATTCGGAAAAAT+TGG	+	Chr7:92807748-92807767	None:intergenic	40.0%
	GAATGTGCCTTGGTACAATA+CGG	+	Chr7:92808118-92808137	None:intergenic	40.0%
	TCAAACTTTGCTGCCAAAGA+AGG	-	Chr7:92808223-92808242	MsG0780041593.01.T01:intron	40.0%
	TCCGAATCCGATCAGAAAAA+TGG	-	Chr7:92807753-92807772	MsG0780041593.01.T01:three_prime_UTR	40.0%
!	CTTTTCATGAATGGAGCAGA+TGG	+	Chr7:92808351-92808370	None:intergenic	40.0%
!	GAAGAACTCAGCAAGCTTTT+GGG	-	Chr7:92808158-92808177	MsG0780041593.01.T01:intron	40.0%
!	TGAAGAACTCAGCAAGCTTT+TGG	-	Chr7:92808157-92808176	MsG0780041593.01.T01:intron	40.0%
!!	GAAACTGATTTGGAAGCCTT+CGG	+	Chr7:92807814-92807833	None:intergenic	40.0%
	AATCTTGCGATTCTTCCGAC+GGG	+	Chr7:92807865-92807884	None:intergenic	45.0%
	ACTGTGACCATTGCTAATGG+TGG	-	Chr7:92808182-92808201	MsG0780041593.01.T01:intron	45.0%
	CAGAACACCACCATTAGCAA+TGG	+	Chr7:92808192-92808211	None:intergenic	45.0%
	GAATCTTGCGATTCTTCCGA+CGG	+	Chr7:92807866-92807885	None:intergenic	45.0%
	GGAACTGTGACCATTGCTAA+TGG	-	Chr7:92808179-92808198	MsG0780041593.01.T01:intron	45.0%
	GTTTCCAGATCTTCAAAGGC+CGG	-	Chr7:92807829-92807848	MsG0780041593.01.T01:three_prime_UTR	45.0%
	AACACGTTCGGCGTATTTGC+CGG	+	Chr7:92807896-92807915	None:intergenic	50.0%
	AAGAAGGCTGGGAAGGGAAA+AGG	-	Chr7:92808239-92808258	MsG0780041593.01.T01:intron	50.0%
	ACAGCAAGCTGAATGTGCCT+TGG	+	Chr7:92808128-92808147	None:intergenic	50.0%
	ACTTTGCTGCCAAAGAAGGC+TGG	-	Chr7:92808227-92808246	MsG0780041593.01.T01:intron	50.0%
	ATCGCAAGATTCCTCAAGGC+CGG	-	Chr7:92807874-92807893	MsG0780041593.01.T01:three_prime_UTR	50.0%
	ATCTTGCGATTCTTCCGACG+GGG	+	Chr7:92807864-92807883	None:intergenic	50.0%
	CTTTGCTGCCAAAGAAGGCT+GGG	-	Chr7:92808228-92808247	MsG0780041593.01.T01:intron	50.0%
	GATTCTGCTGGTACCACCAA+GGG	-	Chr7:92807775-92807794	MsG0780041593.01.T01:three_prime_UTR	50.0%
	GGGAAGGGAAAAGGCGAAAT+TGG	-	Chr7:92808248-92808267	MsG0780041593.01.T01:CDS	50.0%
	TTTCCCTTCCCAGCCTTCTT+TGG	+	Chr7:92808239-92808258	None:intergenic	50.0%
!	AAGTCCGGCCTTTGAAGATC+TGG	+	Chr7:92807836-92807855	None:intergenic	50.0%
	AATTGGCTGGGAACGCTGCA+AGG	-	Chr7:92808078-92808097	MsG0780041593.01.T01:CDS	55.0%
	AGCTCCGGTATACCTCTCTG+CGG	-	Chr7:92807924-92807943	MsG0780041593.01.T01:CDS	55.0%
	ATTGGCTGGGAACGCTGCAA+GGG	-	Chr7:92808079-92808098	MsG0780041593.01.T01:CDS	55.0%
	CCTCAGCAGCGAGATACTCA+AGG	+	Chr7:92807951-92807970	None:intergenic	55.0%
	CCTTGAGTATCTCGCTGCTG+AGG	-	Chr7:92807948-92807967	MsG0780041593.01.T01:CDS	55.0%
	CTGCCAAAGAAGGCTGGGAA+GGG	-	Chr7:92808233-92808252	MsG0780041593.01.T01:intron	55.0%
	GATACTCAAGGACCGCAGAG+AGG	+	Chr7:92807939-92807958	None:intergenic	55.0%
	GGATTCTGCTGGTACCACCA+AGG	-	Chr7:92807774-92807793	MsG0780041593.01.T01:three_prime_UTR	55.0%
	GGCAAATACGCCGAACGTGT+TGG	-	Chr7:92807895-92807914	MsG0780041593.01.T01:three_prime_UTR	55.0%
	TCCGACGGGGAATTGAAGTC+CGG	+	Chr7:92807851-92807870	None:intergenic	55.0%
	TGGTACCACCAAGGGAGGAA+GGG	-	Chr7:92807783-92807802	MsG0780041593.01.T01:three_prime_UTR	55.0%
!	AGAGAGGTATACCGGAGCTC+CGG	+	Chr7:92807923-92807942	None:intergenic	55.0%
!	AGGACCGCAGAGAGGTATAC+CGG	+	Chr7:92807931-92807950	None:intergenic	55.0%
!	TTTTCCCCTTCCTCCCTTGG+TGG	+	Chr7:92807791-92807810	None:intergenic	55.0%
!!	GGCACATTCAGCTTGCTGTC+AGG	-	Chr7:92808129-92808148	MsG0780041593.01.T01:intron	55.0%
	AGCTCCGGCACCAACACGTT+CGG	+	Chr7:92807908-92807927	None:intergenic	60.0%
	CTGGTACCACCAAGGGAGGA+AGG	-	Chr7:92807782-92807801	MsG0780041593.01.T01:three_prime_UTR	60.0%
	GCCGGACTTCAATTCCCCGT+CGG	-	Chr7:92807847-92807866	MsG0780041593.01.T01:three_prime_UTR	60.0%
	GCTGCCAAAGAAGGCTGGGA+AGG	-	Chr7:92808232-92808251	MsG0780041593.01.T01:intron	60.0%
	GGGAGGAAGGGGAAAACCGA+AGG	-	Chr7:92807795-92807814	MsG0780041593.01.T01:three_prime_UTR	60.0%
	GGTACCACCAAGGGAGGAAG+GGG	-	Chr7:92807784-92807803	MsG0780041593.01.T01:three_prime_UTR	60.0%
	TCTGCTGGTACCACCAAGGG+AGG	-	Chr7:92807778-92807797	MsG0780041593.01.T01:three_prime_UTR	60.0%
!	CGGTTTTCCCCTTCCTCCCT+TGG	+	Chr7:92807794-92807813	None:intergenic	60.0%
!	TACGCCGAACGTGTTGGTGC+CGG	-	Chr7:92807901-92807920	MsG0780041593.01.T01:exon	60.0%
	CGGCGTATTTGCCGGCCTTG+AGG	+	Chr7:92807888-92807907	None:intergenic	65.0%
!!	ACGTGTTGGTGCCGGAGCTC+CGG	-	Chr7:92807909-92807928	MsG0780041593.01.T01:exon	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	92807693	92808517	92807693	ID=MsG0780041593.01;Name=MsG0780041593.01
Chr7	mRNA	92807693	92808517	92807693	ID=MsG0780041593.01.T01;Parent=MsG0780041593.01;Name=MsG0780041593.01.T01;_AED=0.17;_eAED=0.17;_QI=79\|1\|1\|1\|1\|1\|2\|225\|139
Chr7	exon	92807693	92808139	92807693	ID=MsG0780041593.01.T01:exon:22036;Parent=MsG0780041593.01.T01
Chr7	exon	92808241	92808517	92808241	ID=MsG0780041593.01.T01:exon:22035;Parent=MsG0780041593.01.T01
Chr7	five_prime_UTR	92808439	92808517	92808439	ID=MsG0780041593.01.T01:five_prime_utr;Parent=MsG0780041593.01.T01
Chr7	CDS	92808241	92808438	92808241	ID=MsG0780041593.01.T01:cds;Parent=MsG0780041593.01.T01
Chr7	CDS	92807918	92808139	92807918	ID=MsG0780041593.01.T01:cds;Parent=MsG0780041593.01.T01
Chr7	three_prime_UTR	92807693	92807917	92807693	ID=MsG0780041593.01.T01:three_prime_utr;Parent=MsG0780041593.01.T01

Gene Sequence

>MsG0780041593.01.T01

ATGGATTCTGCTGGTACCACCAAGGGAGGAAGGGGAAAACCGAAGGCTTCCAAATCAGTTTCCAGATCTTCAAAGGCCGGACTTCAATTCCCCGTCGGAAGAATCGCAAGATTCCTCAAGGCCGGCAAATACGCCGAACGTGTTGGTGCCGGAGCTCCGGTATACCTCTCTGCGGTCCTTGAGTATCTCGCTGCTGAGGTTTTGGAATTGGCTGGGAACGCTGCAAGGGACAACAAGAAGAACCGTATTGTACCAAGGCACATTCAGCTTGCTGTCAGGAACGATGAAGAACTCAGCAAGCTTTTGGGAACTGTGACCATTGCTAATGGTGGTGTTCTGCCCAATATTCATCAAACTTTGCTGCCAAAGAAGGCTGGGAAGGGAAAAGGCGAAATTGGATCTGCTTCTCAAGAATTTTAG

Protein sequence

>MsG0780041593.01.T01

MDSAGTTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKAGKGKGEIGSASQEF*