Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038642.01.T01 | KYP58465.1 | 100 | 136 | 0 | 0 | 1 | 136 | 5 | 140 | 1.76E-92 | 273 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038642.01.T01 | P68427 | 100 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 5.13E-95 | 272 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038642.01.T01 | A0A452Z7H5 | 100.000 | 136 | 0 | 0 | 1 | 136 | 100 | 235 | 3.73e-93 | 278 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048797.01 | MsG0780038642.01 | 0.870715 | 1.183586e-66 | 4.649991e-63 |
MsG0180001719.01 | MsG0780038642.01 | 0.805859 | 1.089055e-49 | 5.824685e-47 |
MsG0180003857.01 | MsG0780038642.01 | 0.806198 | 9.243740e-50 | 4.986723e-47 |
MsG0180004120.01 | MsG0780038642.01 | 0.844909 | 5.644811e-59 | 9.249033e-56 |
MsG0180004538.01 | MsG0780038642.01 | 0.823011 | 1.742462e-53 | 1.482412e-50 |
MsG0180004583.01 | MsG0780038642.01 | 0.838434 | 2.883018e-57 | 3.861174e-54 |
MsG0180006133.01 | MsG0780038642.01 | 0.820710 | 5.940631e-53 | 4.736005e-50 |
MsG0380012956.01 | MsG0780038642.01 | 0.807093 | 5.981043e-50 | 3.301524e-47 |
MsG0380014542.01 | MsG0780038642.01 | 0.820184 | 7.841583e-53 | 6.161415e-50 |
MsG0380014666.01 | MsG0780038642.01 | 0.837704 | 4.443602e-57 | 5.820214e-54 |
MsG0480020398.01 | MsG0780038642.01 | 0.816998 | 4.141245e-52 | 2.979966e-49 |
MsG0480020926.01 | MsG0780038642.01 | 0.813490 | 2.493039e-51 | 1.630442e-48 |
MsG0480020970.01 | MsG0780038642.01 | 0.832797 | 7.702148e-56 | 8.701161e-53 |
MsG0480021100.01 | MsG0780038642.01 | 0.840265 | 9.649697e-58 | 1.367166e-54 |
MsG0480021301.01 | MsG0780038642.01 | 0.824978 | 6.022203e-54 | 5.417960e-51 |
MsG0480021704.01 | MsG0780038642.01 | 0.813140 | 2.975766e-51 | 1.927476e-48 |
MsG0480021773.01 | MsG0780038642.01 | 0.825628 | 4.225601e-54 | 3.872549e-51 |
MsG0480021902.01 | MsG0780038642.01 | 0.835172 | 1.958493e-56 | 2.375858e-53 |
MsG0480022307.01 | MsG0780038642.01 | 0.839932 | 1.178963e-57 | 1.653186e-54 |
MsG0480022784.01 | MsG0780038642.01 | 0.808243 | 3.408710e-50 | 1.939131e-47 |
MsG0480023424.01 | MsG0780038642.01 | 0.804844 | 1.777551e-49 | 9.262209e-47 |
MsG0480023426.01 | MsG0780038642.01 | 0.852552 | 4.284891e-61 | 8.985404e-58 |
MsG0480023706.01 | MsG0780038642.01 | 0.813002 | 3.190244e-51 | 2.058877e-48 |
MsG0480023842.01 | MsG0780038642.01 | 0.855647 | 5.481557e-62 | 1.274379e-58 |
MsG0480024019.01 | MsG0780038642.01 | 0.808589 | 2.875319e-50 | 1.650492e-47 |
MsG0580024276.01 | MsG0780038642.01 | 0.814939 | 1.192980e-51 | 8.113544e-49 |
MsG0580025504.01 | MsG0780038642.01 | 0.885955 | 5.202942e-72 | 3.643418e-68 |
MsG0380015090.01 | MsG0780038642.01 | 0.815362 | 9.612902e-52 | 6.613732e-49 |
MsG0380015340.01 | MsG0780038642.01 | 0.807151 | 5.814983e-50 | 3.214725e-47 |
MsG0380016225.01 | MsG0780038642.01 | 0.802868 | 4.573257e-49 | 2.264912e-46 |
MsG0380017696.01 | MsG0780038642.01 | 0.823478 | 1.355808e-53 | 1.168698e-50 |
MsG0480018228.01 | MsG0780038642.01 | 0.807338 | 5.307047e-50 | 2.948312e-47 |
MsG0580028955.01 | MsG0780038642.01 | 0.818280 | 2.128049e-52 | 1.585942e-49 |
MsG0280007919.01 | MsG0780038642.01 | 0.823417 | 1.400659e-53 | 1.205204e-50 |
MsG0780038642.01 | MsG0780038736.01 | 0.812790 | 3.550268e-51 | 2.278206e-48 |
MsG0780038642.01 | MsG0780040899.01 | 0.807446 | 5.034685e-50 | 2.804853e-47 |
MsG0780038642.01 | MsG0780041219.01 | 0.819019 | 1.446639e-52 | 1.100491e-49 |
MsG0780038642.01 | MsG0780041273.01 | 0.844832 | 5.920704e-59 | 9.678062e-56 |
MsG0780038642.01 | MsG0780041359.01 | 0.810159 | 1.324182e-50 | 7.923557e-48 |
MsG0780038642.01 | MsG0880044437.01 | 0.814920 | 1.204709e-51 | 8.188980e-49 |
MsG0780038642.01 | MsG0880045015.01 | 0.833436 | 5.337885e-56 | 6.147119e-53 |
MsG0780038642.01 | MsG0880045647.01 | 0.814712 | 1.339925e-51 | 9.057487e-49 |
MsG0780038642.01 | MsG0880046904.01 | 0.818979 | 1.477565e-52 | 1.122808e-49 |
MsG0780038642.01 | MsG0880046905.01 | 0.824043 | 9.992992e-54 | 8.751941e-51 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038642.01.T01 | MTR_7g059070 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_5g029820 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_5g029770 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_4g065990 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_4g088150 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_2g035230 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_8g092720 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_8g063500 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_8g103245 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_8g092820 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 4.99e-96 | 272 |
MsG0780038642.01.T01 | MTR_7g013610 | 100.000 | 136 | 0 | 0 | 1 | 136 | 100 | 235 | 1.15e-95 | 275 |
MsG0780038642.01.T01 | MTR_4g097175 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
MsG0780038642.01.T01 | MTR_1g023630 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
MsG0780038642.01.T01 | MTR_8g061940 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
MsG0780038642.01.T01 | MTR_8g099430 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.44e-92 | 264 |
MsG0780038642.01.T01 | MTR_4g097170 | 96.324 | 136 | 5 | 0 | 1 | 136 | 42 | 177 | 2.38e-91 | 262 |
MsG0780038642.01.T01 | MTR_2g082310 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.44e-86 | 248 |
MsG0780038642.01.T01 | MTR_2g082340 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.44e-86 | 248 |
MsG0780038642.01.T01 | MTR_2g082370 | 85.616 | 146 | 11 | 1 | 1 | 136 | 1 | 146 | 1.82e-82 | 238 |
MsG0780038642.01.T01 | MTR_2g082400 | 84.559 | 136 | 19 | 2 | 1 | 135 | 1 | 135 | 6.64e-75 | 219 |
MsG0780038642.01.T01 | MTR_7g013600 | 86.607 | 112 | 15 | 0 | 25 | 136 | 2 | 113 | 1.05e-65 | 195 |
MsG0780038642.01.T01 | MTR_7g023830 | 67.164 | 134 | 43 | 1 | 1 | 134 | 1 | 133 | 6.74e-56 | 171 |
MsG0780038642.01.T01 | MTR_1g023630 | 73.504 | 117 | 15 | 3 | 1 | 111 | 1 | 107 | 3.96e-52 | 160 |
MsG0780038642.01.T01 | MTR_5g024630 | 67.241 | 116 | 35 | 2 | 1 | 116 | 1 | 113 | 1.69e-45 | 144 |
MsG0780038642.01.T01 | MTR_7g023880 | 58.647 | 133 | 41 | 3 | 3 | 134 | 18 | 137 | 5.67e-43 | 139 |
MsG0780038642.01.T01 | MTR_5g024530 | 68.182 | 110 | 12 | 2 | 19 | 128 | 68 | 154 | 4.74e-42 | 137 |
MsG0780038642.01.T01 | MTR_0197s0100 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 1.50e-40 | 132 |
MsG0780038642.01.T01 | MTR_8g027840 | 55.102 | 98 | 43 | 1 | 37 | 133 | 28 | 125 | 5.01e-30 | 105 |
MsG0780038642.01.T01 | MTR_8g105150 | 53.846 | 91 | 10 | 1 | 37 | 127 | 11 | 69 | 1.48e-25 | 92.4 |
MsG0780038642.01.T01 | MTR_8g092740 | 97.368 | 38 | 1 | 0 | 99 | 136 | 118 | 155 | 4.75e-20 | 80.9 |
MsG0780038642.01.T01 | MTR_5g089120 | 76.190 | 42 | 10 | 0 | 82 | 123 | 6 | 47 | 6.26e-18 | 73.6 |
MsG0780038642.01.T01 | MTR_5g024600 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 1.81e-15 | 66.2 |
MsG0780038642.01.T01 | MTR_4g128040 | 75.676 | 37 | 9 | 0 | 79 | 115 | 20 | 56 | 3.48e-15 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038642.01.T01 | AT5G65360 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
MsG0780038642.01.T01 | AT5G10390 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
MsG0780038642.01.T01 | AT5G10400 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
MsG0780038642.01.T01 | AT3G27360 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
MsG0780038642.01.T01 | AT1G09200 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
MsG0780038642.01.T01 | AT5G10980 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40040 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40040 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40040 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
MsG0780038642.01.T01 | AT4G40030 | 97.059 | 136 | 4 | 0 | 1 | 136 | 29 | 164 | 7.04e-93 | 266 |
MsG0780038642.01.T01 | AT5G65350 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 5.30e-91 | 260 |
MsG0780038642.01.T01 | AT1G75600 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 1.25e-89 | 256 |
MsG0780038642.01.T01 | AT1G13370 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 5.55e-89 | 254 |
MsG0780038642.01.T01 | AT1G19890 | 89.781 | 137 | 13 | 1 | 1 | 136 | 1 | 137 | 1.07e-83 | 241 |
MsG0780038642.01.T01 | AT5G12910 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 9.89e-67 | 198 |
MsG0780038642.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
MsG0780038642.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
MsG0780038642.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
MsG0780038642.01.T01 | AT1G01370 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
Find 33 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTGATTTCCGTGCGGCTT+TGG | 0.327301 | 7:-50328907 | None:intergenic |
TTCACGAAGCGCGACGGTTC+CGG | 0.341493 | 7:-50328970 | None:intergenic |
TCACGAAGCGCGACGGTTCC+GGG | 0.353522 | 7:-50328969 | None:intergenic |
GCTGCTGAAGCTTATCTTGT+TGG | 0.357332 | 7:+50329125 | MsG0780038642.01.T01:CDS |
CTTGCAAGTTGAATATCCTT+AGG | 0.413826 | 7:-50329203 | None:intergenic |
GAGCAGAAACAGCACTGCTC+TGG | 0.422418 | 7:-50329094 | None:intergenic |
GGATTTGCGTGCTGTTTGTT+TGG | 0.426439 | 7:-50328850 | None:intergenic |
TGATTTCCGTGCGGCTTTGG+TGG | 0.441149 | 7:-50328904 | None:intergenic |
TTCTTCACTCCTCCGGTCGC+CGG | 0.442119 | 7:-50328930 | None:intergenic |
CGGAAATCAGCTCCGGCGAC+CGG | 0.469854 | 7:+50328918 | MsG0780038642.01.T01:CDS |
CAGTGCTCTTCTGATACTTA+CGG | 0.470671 | 7:-50328995 | None:intergenic |
AGCCGCACGGAAATCAGCTC+CGG | 0.497667 | 7:+50328911 | MsG0780038642.01.T01:CDS |
CAACTTGCAAGAAGAATTCG+TGG | 0.509427 | 7:+50329215 | MsG0780038642.01.T01:CDS |
CGACGGTTCCGGGACGGAAA+CGG | 0.513929 | 7:-50328959 | None:intergenic |
GAGAGTTACTATTATGCCTA+AGG | 0.517685 | 7:+50329187 | MsG0780038642.01.T01:CDS |
AAGAAGAATTCGTGGCGAAA+GGG | 0.518867 | 7:+50329223 | MsG0780038642.01.T01:CDS |
CAAGAAGAATTCGTGGCGAA+AGG | 0.521306 | 7:+50329222 | MsG0780038642.01.T01:CDS |
GTGTGGCTTCTTCACTCCTC+CGG | 0.526132 | 7:-50328937 | None:intergenic |
AGAGCACTGAGCTTCTGATA+AGG | 0.532730 | 7:+50329009 | MsG0780038642.01.T01:CDS |
AAGCCACACCGTTTCCGTCC+CGG | 0.544193 | 7:+50328951 | MsG0780038642.01.T01:CDS |
CAAACAGCACGCAAATCCAC+CGG | 0.549355 | 7:+50328855 | MsG0780038642.01.T01:CDS |
TCTTGTTCGTGAAATCGCTC+AGG | 0.549771 | 7:+50329049 | MsG0780038642.01.T01:CDS |
TCACGAACAAGACGTTGGAA+TGG | 0.598115 | 7:-50329038 | None:intergenic |
ACTGCTCTGGAATCTGAGAT+CGG | 0.602457 | 7:-50329081 | None:intergenic |
AAATCAGCTCCGGCGACCGG+AGG | 0.606043 | 7:+50328921 | MsG0780038642.01.T01:CDS |
CGATTTCACGAACAAGACGT+TGG | 0.613448 | 7:-50329043 | None:intergenic |
ACGGATTTCACGAAGCGCGA+CGG | 0.624291 | 7:-50328976 | None:intergenic |
AACTCGCCACCAAAGCCGCA+CGG | 0.635817 | 7:+50328898 | MsG0780038642.01.T01:CDS |
GAAGCGCGACGGTTCCGGGA+CGG | 0.640203 | 7:-50328965 | None:intergenic |
GTTCCGGGACGGAAACGGTG+TGG | 0.652674 | 7:-50328954 | None:intergenic |
TTGGTGGCGAGTTGTTTGCG+TGG | 0.686020 | 7:-50328888 | None:intergenic |
ACAGCACGCAAATCCACCGG+CGG | 0.691035 | 7:+50328858 | MsG0780038642.01.T01:CDS |
CGCCGGAGCTGATTTCCGTG+CGG | 0.701307 | 7:-50328913 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
GAGAGTTACTATTATGCCTA+AGG | + | Chr7:50329187-50329206 | MsG0780038642.01.T01:CDS | 35.0% | |
! | CTTGCAAGTTGAATATCCTT+AGG | - | Chr7:50329206-50329225 | None:intergenic | 35.0% |
AAGAAGAATTCGTGGCGAAA+GGG | + | Chr7:50329223-50329242 | MsG0780038642.01.T01:CDS | 40.0% | |
CAACTTGCAAGAAGAATTCG+TGG | + | Chr7:50329215-50329234 | MsG0780038642.01.T01:CDS | 40.0% | |
CAGTGCTCTTCTGATACTTA+CGG | - | Chr7:50328998-50329017 | None:intergenic | 40.0% | |
CAAGAAGAATTCGTGGCGAA+AGG | + | Chr7:50329222-50329241 | MsG0780038642.01.T01:CDS | 45.0% | |
CGATTTCACGAACAAGACGT+TGG | - | Chr7:50329046-50329065 | None:intergenic | 45.0% | |
GCTGCTGAAGCTTATCTTGT+TGG | + | Chr7:50329125-50329144 | MsG0780038642.01.T01:CDS | 45.0% | |
TCACGAACAAGACGTTGGAA+TGG | - | Chr7:50329041-50329060 | None:intergenic | 45.0% | |
TCTTGTTCGTGAAATCGCTC+AGG | + | Chr7:50329049-50329068 | MsG0780038642.01.T01:CDS | 45.0% | |
!! | ACTGCTCTGGAATCTGAGAT+CGG | - | Chr7:50329084-50329103 | None:intergenic | 45.0% |
!! | AGAGCACTGAGCTTCTGATA+AGG | + | Chr7:50329009-50329028 | MsG0780038642.01.T01:CDS | 45.0% |
!! | GGATTTGCGTGCTGTTTGTT+TGG | - | Chr7:50328853-50328872 | None:intergenic | 45.0% |
CAAACAGCACGCAAATCCAC+CGG | + | Chr7:50328855-50328874 | MsG0780038642.01.T01:CDS | 50.0% | |
ACGGATTTCACGAAGCGCGA+CGG | - | Chr7:50328979-50328998 | None:intergenic | 55.0% | |
GAGCAGAAACAGCACTGCTC+TGG | - | Chr7:50329097-50329116 | None:intergenic | 55.0% | |
GTGTGGCTTCTTCACTCCTC+CGG | - | Chr7:50328940-50328959 | None:intergenic | 55.0% | |
! | AGCTGATTTCCGTGCGGCTT+TGG | - | Chr7:50328910-50328929 | None:intergenic | 55.0% |
! | TGATTTCCGTGCGGCTTTGG+TGG | - | Chr7:50328907-50328926 | None:intergenic | 55.0% |
! | TTTGCGTGGTGCTTTTCCGC+CGG | - | Chr7:50328877-50328896 | None:intergenic | 55.0% |
!! | TTGGTGGCGAGTTGTTTGCG+TGG | - | Chr7:50328891-50328910 | None:intergenic | 55.0% |
AACTCGCCACCAAAGCCGCA+CGG | + | Chr7:50328898-50328917 | MsG0780038642.01.T01:CDS | 60.0% | |
AAGCCACACCGTTTCCGTCC+CGG | + | Chr7:50328951-50328970 | MsG0780038642.01.T01:CDS | 60.0% | |
ACAGCACGCAAATCCACCGG+CGG | + | Chr7:50328858-50328877 | MsG0780038642.01.T01:CDS | 60.0% | |
AGCCGCACGGAAATCAGCTC+CGG | + | Chr7:50328911-50328930 | MsG0780038642.01.T01:CDS | 60.0% | |
TTCACGAAGCGCGACGGTTC+CGG | - | Chr7:50328973-50328992 | None:intergenic | 60.0% | |
TTCTTCACTCCTCCGGTCGC+CGG | - | Chr7:50328933-50328952 | None:intergenic | 60.0% | |
AAATCAGCTCCGGCGACCGG+AGG | + | Chr7:50328921-50328940 | MsG0780038642.01.T01:CDS | 65.0% | |
CGACGGTTCCGGGACGGAAA+CGG | - | Chr7:50328962-50328981 | None:intergenic | 65.0% | |
CGGAAATCAGCTCCGGCGAC+CGG | + | Chr7:50328918-50328937 | MsG0780038642.01.T01:CDS | 65.0% | |
GTTCCGGGACGGAAACGGTG+TGG | - | Chr7:50328957-50328976 | None:intergenic | 65.0% | |
TCACGAAGCGCGACGGTTCC+GGG | - | Chr7:50328972-50328991 | None:intergenic | 65.0% | |
! | CGCCGGAGCTGATTTCCGTG+CGG | - | Chr7:50328916-50328935 | None:intergenic | 65.0% |
GAAGCGCGACGGTTCCGGGA+CGG | - | Chr7:50328968-50328987 | None:intergenic | 70.0% | |
! | GCGTGGTGCTTTTCCGCCGG+TGG | - | Chr7:50328874-50328893 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 50328840 | 50329250 | 50328840 | ID=MsG0780038642.01;Name=MsG0780038642.01 |
Chr7 | mRNA | 50328840 | 50329250 | 50328840 | ID=MsG0780038642.01.T01;Parent=MsG0780038642.01;Name=MsG0780038642.01.T01;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|136 |
Chr7 | exon | 50328840 | 50329250 | 50328840 | ID=MsG0780038642.01.T01:exon:14720;Parent=MsG0780038642.01.T01 |
Chr7 | CDS | 50328840 | 50329250 | 50328840 | ID=MsG0780038642.01.T01:cds;Parent=MsG0780038642.01.T01 |
Gene Sequence |
Protein sequence |