Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044881.01.T01 | KAF2560297.1 | 100 | 136 | 0 | 0 | 1 | 136 | 28 | 163 | 3.60E-93 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044881.01.T01 | A2XHJ3 | 100 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.42E-95 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044881.01.T01 | A0A453QJ99 | 100.000 | 136 | 0 | 0 | 1 | 136 | 32 | 167 | 1.71e-93 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048964.01 | MsG0880044881.01 | 0.804245 | 2.369554e-49 | 1.215636e-46 |
| MsG0080049032.01 | MsG0880044881.01 | 0.807167 | 5.769124e-50 | 3.190723e-47 |
| MsG0180000209.01 | MsG0880044881.01 | 0.802374 | 5.784194e-49 | 2.828874e-46 |
| MsG0180001141.01 | MsG0880044881.01 | 0.808843 | 2.537139e-50 | 1.466114e-47 |
| MsG0880044881.01 | MsG0880045145.01 | 0.815964 | 7.059638e-52 | 4.937868e-49 |
| MsG0880044881.01 | MsG0880045535.01 | 0.801964 | 7.021903e-49 | 3.398232e-46 |
| MsG0880044881.01 | MsG0880045937.01 | 0.811293 | 7.527029e-51 | 4.641205e-48 |
| MsG0880044881.01 | MsG0880047472.01 | 0.822252 | 2.616656e-53 | 2.178544e-50 |
| MsG0180003671.01 | MsG0880044881.01 | 0.803983 | 2.686388e-49 | 1.369076e-46 |
| MsG0780040841.01 | MsG0880044881.01 | 0.829321 | 5.495602e-55 | 5.606368e-52 |
| MsG0880043592.01 | MsG0880044881.01 | 0.810076 | 1.379940e-50 | 8.239404e-48 |
| MsG0280010980.01 | MsG0880044881.01 | 0.872456 | 3.136426e-67 | 1.313490e-63 |
| MsG0280011003.01 | MsG0880044881.01 | 0.855170 | 7.549962e-62 | 1.727440e-58 |
| MsG0280011013.01 | MsG0880044881.01 | 0.843189 | 1.632999e-58 | 2.534797e-55 |
| MsG0280011141.01 | MsG0880044881.01 | 0.803032 | 4.229709e-49 | 2.103467e-46 |
| MsG0380014248.01 | MsG0880044881.01 | 0.803172 | 3.957258e-49 | 1.975098e-46 |
| MsG0380014681.01 | MsG0880044881.01 | 0.826127 | 3.217476e-54 | 2.990720e-51 |
| MsG0380014703.01 | MsG0880044881.01 | 0.862108 | 6.400503e-64 | 1.852781e-60 |
| MsG0480021464.01 | MsG0880044881.01 | 0.805419 | 1.347218e-49 | 7.123947e-47 |
| MsG0480021465.01 | MsG0880044881.01 | 0.816833 | 4.509313e-52 | 3.229950e-49 |
| MsG0480021994.01 | MsG0880044881.01 | 0.808576 | 2.893411e-50 | 1.660346e-47 |
| MsG0480022164.01 | MsG0880044881.01 | 0.828352 | 9.428027e-55 | 9.347392e-52 |
| MsG0380015164.01 | MsG0880044881.01 | 0.812255 | 4.647491e-51 | 2.940551e-48 |
| MsG0280006595.01 | MsG0880044881.01 | 0.811539 | 6.657180e-51 | 4.131842e-48 |
| MsG0280007815.01 | MsG0880044881.01 | 0.807166 | 5.772668e-50 | 3.192591e-47 |
| MsG0280008249.01 | MsG0880044881.01 | 0.805738 | 1.154994e-49 | 6.158181e-47 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044881.01.T01 | MTR_4g097175 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.38e-96 | 274 |
| MsG0880044881.01.T01 | MTR_1g023630 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.38e-96 | 274 |
| MsG0880044881.01.T01 | MTR_8g061940 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.38e-96 | 274 |
| MsG0880044881.01.T01 | MTR_8g099430 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 5.05e-96 | 272 |
| MsG0880044881.01.T01 | MTR_4g097170 | 99.265 | 136 | 1 | 0 | 1 | 136 | 42 | 177 | 8.03e-95 | 271 |
| MsG0880044881.01.T01 | MTR_7g059070 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_5g029820 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_5g029770 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_4g065990 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_4g088150 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_2g035230 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_8g092720 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_8g063500 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_8g103245 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_8g092820 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.42e-93 | 265 |
| MsG0880044881.01.T01 | MTR_7g013610 | 97.059 | 136 | 4 | 0 | 1 | 136 | 100 | 235 | 2.74e-92 | 266 |
| MsG0880044881.01.T01 | MTR_2g082310 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 4.34e-90 | 257 |
| MsG0880044881.01.T01 | MTR_2g082340 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 4.34e-90 | 257 |
| MsG0880044881.01.T01 | MTR_2g082370 | 86.301 | 146 | 10 | 1 | 1 | 136 | 1 | 146 | 3.95e-84 | 243 |
| MsG0880044881.01.T01 | MTR_2g082400 | 85.294 | 136 | 18 | 2 | 1 | 135 | 1 | 135 | 1.44e-76 | 223 |
| MsG0880044881.01.T01 | MTR_7g013600 | 83.036 | 112 | 19 | 0 | 25 | 136 | 2 | 113 | 1.79e-62 | 187 |
| MsG0880044881.01.T01 | MTR_7g023830 | 67.164 | 134 | 43 | 1 | 1 | 134 | 1 | 133 | 3.94e-56 | 172 |
| MsG0880044881.01.T01 | MTR_1g023630 | 77.477 | 111 | 23 | 1 | 1 | 111 | 1 | 109 | 1.57e-54 | 167 |
| MsG0880044881.01.T01 | MTR_7g023880 | 60.150 | 133 | 39 | 3 | 3 | 134 | 18 | 137 | 2.49e-44 | 142 |
| MsG0880044881.01.T01 | MTR_5g024630 | 63.793 | 116 | 39 | 2 | 1 | 116 | 1 | 113 | 1.60e-42 | 136 |
| MsG0880044881.01.T01 | MTR_5g024530 | 65.455 | 110 | 15 | 2 | 19 | 128 | 68 | 154 | 6.49e-40 | 131 |
| MsG0880044881.01.T01 | MTR_0197s0100 | 96.970 | 66 | 2 | 0 | 1 | 66 | 1 | 66 | 1.91e-39 | 129 |
| MsG0880044881.01.T01 | MTR_8g027840 | 56.122 | 98 | 42 | 1 | 37 | 133 | 28 | 125 | 4.82e-31 | 108 |
| MsG0880044881.01.T01 | MTR_8g105150 | 59.783 | 92 | 3 | 2 | 37 | 127 | 11 | 69 | 1.28e-26 | 95.1 |
| MsG0880044881.01.T01 | MTR_8g092740 | 97.368 | 38 | 1 | 0 | 99 | 136 | 118 | 155 | 5.96e-20 | 80.5 |
| MsG0880044881.01.T01 | MTR_5g089120 | 68.085 | 47 | 15 | 0 | 82 | 128 | 6 | 52 | 1.62e-16 | 70.1 |
| MsG0880044881.01.T01 | MTR_5g024600 | 62.963 | 54 | 20 | 0 | 1 | 54 | 1 | 54 | 1.17e-15 | 66.6 |
| MsG0880044881.01.T01 | MTR_4g128040 | 72.973 | 37 | 10 | 0 | 79 | 115 | 20 | 56 | 6.28e-14 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044881.01.T01 | AT5G10980 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40040 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.45e-96 | 274 |
| MsG0880044881.01.T01 | AT4G40030 | 100.000 | 136 | 0 | 0 | 1 | 136 | 29 | 164 | 2.12e-96 | 275 |
| MsG0880044881.01.T01 | AT5G65360 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 4.00e-93 | 265 |
| MsG0880044881.01.T01 | AT5G10390 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 4.00e-93 | 265 |
| MsG0880044881.01.T01 | AT5G10400 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 4.00e-93 | 265 |
| MsG0880044881.01.T01 | AT3G27360 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 4.00e-93 | 265 |
| MsG0880044881.01.T01 | AT1G09200 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 4.00e-93 | 265 |
| MsG0880044881.01.T01 | AT1G75600 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.06e-92 | 264 |
| MsG0880044881.01.T01 | AT1G13370 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 2.25e-91 | 261 |
| MsG0880044881.01.T01 | AT5G65350 | 92.647 | 136 | 10 | 0 | 1 | 136 | 1 | 136 | 1.32e-88 | 254 |
| MsG0880044881.01.T01 | AT1G19890 | 90.511 | 137 | 12 | 1 | 1 | 136 | 1 | 137 | 1.97e-85 | 246 |
| MsG0880044881.01.T01 | AT5G12910 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 1.19e-65 | 196 |
| MsG0880044881.01.T01 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.36e-32 | 112 |
| MsG0880044881.01.T01 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.36e-32 | 112 |
| MsG0880044881.01.T01 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.36e-32 | 112 |
| MsG0880044881.01.T01 | AT1G01370 | 54.867 | 113 | 48 | 2 | 24 | 134 | 63 | 174 | 3.36e-32 | 112 |
Find 39 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGTTCTTGCACTTC+AGG | 0.281295 | 8:+50878252 | MsG0880044881.01.T01:CDS |
| TCACGAAGAGCAACGGTTCC+AGG | 0.316584 | 8:-50878121 | None:intergenic |
| AGCAGATTTCCTTGCAGCTT+TGG | 0.347069 | 8:-50878059 | None:intergenic |
| CTTCCTTGGTGCTTTGCCGC+CGG | 0.391014 | 8:-50878026 | None:intergenic |
| GGAAGCGGCTGAGGCTTATC+TGG | 0.391484 | 8:+50878273 | MsG0880044881.01.T01:CDS |
| TATTCGTGGTGAACGTGCTT+AGG | 0.412470 | 8:+50878381 | MsG0880044881.01.T01:CDS |
| TTCTTCACTCCGCCGGTGGT+TGG | 0.414328 | 8:-50878082 | None:intergenic |
| TTATCTGGTGGGATTGTTTG+AGG | 0.425602 | 8:+50878288 | MsG0880044881.01.T01:CDS |
| CAGCTTGCTCGTCGTATTCG+TGG | 0.425806 | 8:+50878367 | MsG0880044881.01.T01:CDS |
| TGCACTTCAGGAAGCGGCTG+AGG | 0.430700 | 8:+50878264 | MsG0880044881.01.T01:CDS |
| TTGGTGGCGAGTTGCTTCCT+TGG | 0.434612 | 8:-50878040 | None:intergenic |
| CCTTGGTGCTTTGCCGCCGG+TGG | 0.443251 | 8:-50878023 | None:intergenic |
| AGATTTCCTTGCAGCTTTGG+TGG | 0.476244 | 8:-50878056 | None:intergenic |
| TCTTGTTCGTGAAATTGCTC+AGG | 0.482836 | 8:+50878201 | MsG0880044881.01.T01:CDS |
| CGGTACTCTTCTGATACTTA+CGG | 0.500491 | 8:-50878147 | None:intergenic |
| AAGCCTCATCGTTATCGTCC+TGG | 0.515117 | 8:+50878103 | MsG0880044881.01.T01:CDS |
| AGGAAATCTGCTCCAACCAC+CGG | 0.534350 | 8:+50878070 | MsG0880044881.01.T01:CDS |
| AATTGCTCAGGATTTCAAAA+CGG | 0.537563 | 8:+50878213 | MsG0880044881.01.T01:CDS |
| AGGCTTCTTCACTCCGCCGG+TGG | 0.558370 | 8:-50878086 | None:intergenic |
| GACGCTGGAATGGAAGCTTA+CGG | 0.558442 | 8:-50878180 | None:intergenic |
| TGTTCTTGCACTTCAGGAAG+CGG | 0.559874 | 8:+50878258 | MsG0880044881.01.T01:CDS |
| CGAGCAAGCTGAATATCCTT+CGG | 0.565564 | 8:-50878355 | None:intergenic |
| TCACGAACAAGACGCTGGAA+TGG | 0.567002 | 8:-50878190 | None:intergenic |
| GCGGCTGAGGCTTATCTGGT+GGG | 0.567245 | 8:+50878277 | MsG0880044881.01.T01:CDS |
| CAAACTGCTCGCAAATCCAC+CGG | 0.571388 | 8:+50878007 | MsG0880044881.01.T01:CDS |
| ATGAGGCTTCTTCACTCCGC+CGG | 0.573608 | 8:-50878089 | None:intergenic |
| AGCGGCTGAGGCTTATCTGG+TGG | 0.574844 | 8:+50878276 | MsG0880044881.01.T01:CDS |
| AGGATTTCAAAACGGATCTG+AGG | 0.592218 | 8:+50878221 | MsG0880044881.01.T01:CDS |
| ACGGATCTCACGAAGAGCAA+CGG | 0.595480 | 8:-50878128 | None:intergenic |
| AACTCGCCACCAAAGCTGCA+AGG | 0.602982 | 8:+50878050 | MsG0880044881.01.T01:CDS |
| CAATTTCACGAACAAGACGC+TGG | 0.604340 | 8:-50878195 | None:intergenic |
| GTGTGCTATTCATGCTAAGA+GGG | 0.612146 | 8:+50878321 | MsG0880044881.01.T01:CDS |
| TGTGTGCTATTCATGCTAAG+AGG | 0.615466 | 8:+50878320 | MsG0880044881.01.T01:CDS |
| GAGGGTGACGATTATGCCGA+AGG | 0.625074 | 8:+50878339 | MsG0880044881.01.T01:CDS |
| CCACCGGCGGCAAAGCACCA+AGG | 0.632902 | 8:+50878023 | MsG0880044881.01.T01:CDS |
| AAGCTTACGGATCAAAAGCT+CGG | 0.636318 | 8:-50878167 | None:intergenic |
| ACTGCTCGCAAATCCACCGG+CGG | 0.667900 | 8:+50878010 | MsG0880044881.01.T01:CDS |
| AAATCTGCTCCAACCACCGG+CGG | 0.687441 | 8:+50878073 | MsG0880044881.01.T01:CDS |
| GTTCCAGGACGATAACGATG+AGG | 0.738178 | 8:-50878106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATTGCTCAGGATTTCAAAA+CGG | + | Chr8:50878213-50878232 | MsG0880044881.01.T01:CDS | 30.0% | |
| AAGCTTACGGATCAAAAGCT+CGG | - | Chr8:50878170-50878189 | None:intergenic | 40.0% | |
| AGGATTTCAAAACGGATCTG+AGG | + | Chr8:50878221-50878240 | MsG0880044881.01.T01:CDS | 40.0% | |
| CGGTACTCTTCTGATACTTA+CGG | - | Chr8:50878150-50878169 | None:intergenic | 40.0% | |
| TCTTGTTCGTGAAATTGCTC+AGG | + | Chr8:50878201-50878220 | MsG0880044881.01.T01:CDS | 40.0% | |
| TTATCTGGTGGGATTGTTTG+AGG | + | Chr8:50878288-50878307 | MsG0880044881.01.T01:CDS | 40.0% | |
| ! | GTGTGCTATTCATGCTAAGA+GGG | + | Chr8:50878321-50878340 | MsG0880044881.01.T01:CDS | 40.0% |
| ! | TGTGTGCTATTCATGCTAAG+AGG | + | Chr8:50878320-50878339 | MsG0880044881.01.T01:CDS | 40.0% |
| AGCAGATTTCCTTGCAGCTT+TGG | - | Chr8:50878062-50878081 | None:intergenic | 45.0% | |
| CAATTTCACGAACAAGACGC+TGG | - | Chr8:50878198-50878217 | None:intergenic | 45.0% | |
| CGAGCAAGCTGAATATCCTT+CGG | - | Chr8:50878358-50878377 | None:intergenic | 45.0% | |
| TCATGCTGTTCTTGCACTTC+AGG | + | Chr8:50878252-50878271 | MsG0880044881.01.T01:CDS | 45.0% | |
| TGTTCTTGCACTTCAGGAAG+CGG | + | Chr8:50878258-50878277 | MsG0880044881.01.T01:CDS | 45.0% | |
| ! | AGATTTCCTTGCAGCTTTGG+TGG | - | Chr8:50878059-50878078 | None:intergenic | 45.0% |
| AAGCCTCATCGTTATCGTCC+TGG | + | Chr8:50878103-50878122 | MsG0880044881.01.T01:CDS | 50.0% | |
| ACGGATCTCACGAAGAGCAA+CGG | - | Chr8:50878131-50878150 | None:intergenic | 50.0% | |
| AGGAAATCTGCTCCAACCAC+CGG | + | Chr8:50878070-50878089 | MsG0880044881.01.T01:CDS | 50.0% | |
| CAAACTGCTCGCAAATCCAC+CGG | + | Chr8:50878007-50878026 | MsG0880044881.01.T01:CDS | 50.0% | |
| GACGCTGGAATGGAAGCTTA+CGG | - | Chr8:50878183-50878202 | None:intergenic | 50.0% | |
| GTTCCAGGACGATAACGATG+AGG | - | Chr8:50878109-50878128 | None:intergenic | 50.0% | |
| TCACGAACAAGACGCTGGAA+TGG | - | Chr8:50878193-50878212 | None:intergenic | 50.0% | |
| AAATCTGCTCCAACCACCGG+CGG | + | Chr8:50878073-50878092 | MsG0880044881.01.T01:CDS | 55.0% | |
| AACTCGCCACCAAAGCTGCA+AGG | + | Chr8:50878050-50878069 | MsG0880044881.01.T01:CDS | 55.0% | |
| ATGAGGCTTCTTCACTCCGC+CGG | - | Chr8:50878092-50878111 | None:intergenic | 55.0% | |
| GAGGGTGACGATTATGCCGA+AGG | + | Chr8:50878339-50878358 | MsG0880044881.01.T01:CDS | 55.0% | |
| TCACGAAGAGCAACGGTTCC+AGG | - | Chr8:50878124-50878143 | None:intergenic | 55.0% | |
| ! | CAGCTTGCTCGTCGTATTCG+TGG | + | Chr8:50878367-50878386 | MsG0880044881.01.T01:CDS | 55.0% |
| !! | TTGGTGGCGAGTTGCTTCCT+TGG | - | Chr8:50878043-50878062 | None:intergenic | 55.0% |
| ACTGCTCGCAAATCCACCGG+CGG | + | Chr8:50878010-50878029 | MsG0880044881.01.T01:CDS | 60.0% | |
| AGCGGCTGAGGCTTATCTGG+TGG | + | Chr8:50878276-50878295 | MsG0880044881.01.T01:CDS | 60.0% | |
| GCGGCTGAGGCTTATCTGGT+GGG | + | Chr8:50878277-50878296 | MsG0880044881.01.T01:CDS | 60.0% | |
| GGAAGCGGCTGAGGCTTATC+TGG | + | Chr8:50878273-50878292 | MsG0880044881.01.T01:CDS | 60.0% | |
| TGCACTTCAGGAAGCGGCTG+AGG | + | Chr8:50878264-50878283 | MsG0880044881.01.T01:CDS | 60.0% | |
| TTCTTCACTCCGCCGGTGGT+TGG | - | Chr8:50878085-50878104 | None:intergenic | 60.0% | |
| !! | CTTCCTTGGTGCTTTGCCGC+CGG | - | Chr8:50878029-50878048 | None:intergenic | 60.0% |
| AGGCTTCTTCACTCCGCCGG+TGG | - | Chr8:50878089-50878108 | None:intergenic | 65.0% | |
| ! | CCACCGGCGGCAAAGCACCA+AGG | + | Chr8:50878023-50878042 | MsG0880044881.01.T01:CDS | 70.0% |
| !! | CCTTGGTGCTTTGCCGCCGG+TGG | - | Chr8:50878026-50878045 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 50877992 | 50878402 | 50877992 | ID=MsG0880044881.01;Name=MsG0880044881.01 |
| Chr8 | mRNA | 50877992 | 50878402 | 50877992 | ID=MsG0880044881.01.T01;Parent=MsG0880044881.01;Name=MsG0880044881.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|136 |
| Chr8 | exon | 50877992 | 50878402 | 50877992 | ID=MsG0880044881.01.T01:exon:21543;Parent=MsG0880044881.01.T01 |
| Chr8 | CDS | 50877992 | 50878402 | 50877992 | ID=MsG0880044881.01.T01:cds;Parent=MsG0880044881.01.T01 |
| Gene Sequence |
| Protein sequence |
