AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021465.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021465.01.T01 MTR_5g092700 99.346 153 1 0 1 153 1 153 2.86e-107 302
MsG0480021465.01.T01 MTR_4g073580 99.346 153 1 0 1 153 1 153 2.86e-107 302
MsG0480021465.01.T01 MTR_4g073580 83.060 183 1 1 1 153 1 183 5.65e-101 287
MsG0480021465.01.T01 MTR_7g116360 79.605 152 31 0 1 152 1 152 6.42e-83 243
MsG0480021465.01.T01 MTR_7g116360 79.605 152 31 0 1 152 77 228 6.42e-83 243
MsG0480021465.01.T01 MTR_1g066390 79.605 152 31 0 1 152 1 152 1.11e-82 243
MsG0480021465.01.T01 MTR_1g066390 79.605 152 31 0 1 152 77 228 1.11e-82 243
MsG0480021465.01.T01 MTR_7g116360 79.605 152 31 0 1 152 49 200 2.05e-82 244
MsG0480021465.01.T01 MTR_7g116360 79.605 152 31 0 1 152 125 276 2.05e-82 244
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 1 152 2.13e-82 244
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 77 228 2.13e-82 244
MsG0480021465.01.T01 MTR_8g018230 65.789 152 17 1 1 152 153 269 2.25e-56 177
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 1 152 2.21e-82 244
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 77 228 2.21e-82 244
MsG0480021465.01.T01 MTR_4g081010 91.304 92 8 0 1 92 153 244 8.83e-52 166
MsG0480021465.01.T01 MTR_4g080920 78.947 152 32 0 1 152 1 152 4.36e-82 241
MsG0480021465.01.T01 MTR_4g080920 74.342 152 39 0 1 152 77 228 4.16e-73 219
MsG0480021465.01.T01 MTR_6g061930 79.605 152 31 0 1 152 1 152 5.51e-82 243
MsG0480021465.01.T01 MTR_6g061930 74.342 152 24 1 1 152 77 213 1.16e-70 214
MsG0480021465.01.T01 MTR_6g061930 68.421 152 33 1 1 152 153 289 1.92e-65 201
MsG0480021465.01.T01 MTR_8g081020 79.739 153 31 0 1 153 229 381 6.32e-82 246
MsG0480021465.01.T01 MTR_8g081020 79.605 152 31 0 1 152 1 152 6.26e-81 244
MsG0480021465.01.T01 MTR_8g081020 79.605 152 31 0 1 152 77 228 6.26e-81 244
MsG0480021465.01.T01 MTR_8g081020 79.605 152 31 0 1 152 153 304 6.26e-81 244
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 1 152 8.24e-82 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 77 228 8.24e-82 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 153 304 8.24e-82 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 153 304 5.56e-81 244
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 1 152 6.83e-81 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 77 228 6.83e-81 243
MsG0480021465.01.T01 MTR_4g091580 78.947 152 32 0 1 152 229 380 2.00e-80 242
MsG0480021465.01.T01 MTR_4g080797 79.605 152 31 0 1 152 1 152 7.21e-81 243
MsG0480021465.01.T01 MTR_4g080797 79.605 152 31 0 1 152 77 228 7.21e-81 243
MsG0480021465.01.T01 MTR_4g080797 79.605 152 31 0 1 152 153 304 7.21e-81 243
MsG0480021465.01.T01 MTR_4g080797 79.605 152 31 0 1 152 229 380 7.21e-81 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 1 152 7.21e-81 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 77 228 7.21e-81 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 153 304 7.21e-81 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 229 380 7.21e-81 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 1 152 7.53e-81 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 77 228 7.53e-81 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 153 304 7.53e-81 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 229 380 7.53e-81 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 1 152 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 77 228 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 153 304 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 229 380 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 305 456 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 1 152 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 77 228 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 153 304 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 229 380 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 305 456 5.70e-80 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 1 152 3.66e-79 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 77 228 3.66e-79 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 153 304 3.66e-79 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 229 380 3.66e-79 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 305 456 3.66e-79 243
MsG0480021465.01.T01 MTR_8g018230 79.605 152 31 0 1 152 381 532 3.66e-79 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 1 152 3.78e-79 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 77 228 3.78e-79 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 153 304 3.78e-79 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 229 380 3.78e-79 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 305 456 3.78e-79 243
MsG0480021465.01.T01 MTR_4g081010 79.605 152 31 0 1 152 381 532 3.78e-79 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 1 152 4.07e-79 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 77 228 4.07e-79 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 153 304 4.07e-79 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 381 532 4.07e-79 243
MsG0480021465.01.T01 MTR_4g091580 79.605 152 31 0 1 152 229 380 1.70e-78 242
MsG0480021465.01.T01 MTR_4g091580 78.289 152 33 0 1 152 305 456 1.69e-77 239
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 77 228 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 153 304 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 229 380 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 305 456 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 381 532 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 457 608 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 533 684 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 609 760 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 79.605 152 31 0 1 152 685 836 9.49e-77 244
MsG0480021465.01.T01 MTR_4g088495 78.947 152 32 0 1 152 1 152 1.65e-75 240
MsG0480021465.01.T01 MTR_4g088485 76.316 152 21 1 1 152 1 137 1.83e-73 219
MsG0480021465.01.T01 MTR_4g088485 69.737 152 31 1 1 152 77 213 4.11e-68 205
MsG0480021465.01.T01 MTR_8g479250 72.109 147 30 1 1 147 141 276 1.38e-57 181
MsG0480021465.01.T01 MTR_8g479250 69.091 110 34 0 43 152 107 216 1.17e-41 140
MsG0480021465.01.T01 MTR_8g479250 47.368 152 68 4 1 152 1 140 4.84e-28 105
MsG0480021465.01.T01 MTR_8g479250 75.000 72 7 1 1 72 217 277 1.08e-25 99.4
MsG0480021465.01.T01 MTR_3g092130 96.154 78 3 0 1 78 1 78 3.26e-49 155
MsG0480021465.01.T01 MTR_3g092130 62.162 74 28 0 79 152 3 76 1.40e-26 97.8
MsG0480021465.01.T01 MTR_7g105080 98.684 76 1 0 1 76 1 76 5.81e-49 154
MsG0480021465.01.T01 MTR_7g105080 62.162 74 28 0 79 152 3 76 2.13e-26 97.1
MsG0480021465.01.T01 MTR_3g092130 98.684 76 1 0 1 76 1 76 5.81e-49 154
MsG0480021465.01.T01 MTR_3g092130 62.162 74 28 0 79 152 3 76 2.13e-26 97.1
MsG0480021465.01.T01 MTR_1g059690 98.684 76 1 0 1 76 1 76 5.81e-49 154
MsG0480021465.01.T01 MTR_1g059690 62.162 74 28 0 79 152 3 76 2.13e-26 97.1
MsG0480021465.01.T01 MTR_8g088060 97.403 77 2 0 1 77 1 77 1.60e-48 154
MsG0480021465.01.T01 MTR_8g088060 62.162 74 28 0 79 152 3 76 3.79e-26 97.1
MsG0480021465.01.T01 MTR_5g033960 97.403 77 2 0 1 77 1 77 1.73e-48 154
MsG0480021465.01.T01 MTR_5g033960 62.162 74 28 0 79 152 3 76 3.75e-26 97.1
MsG0480021465.01.T01 MTR_1g046640 71.053 76 22 0 1 76 240 315 7.11e-29 108
MsG0480021465.01.T01 MTR_1g046640 44.595 74 41 0 79 152 242 315 1.02e-13 67.4
MsG0480021465.01.T01 MTR_5g076810 68.831 77 23 1 1 76 194 270 8.75e-28 104
MsG0480021465.01.T01 MTR_5g076810 48.000 75 38 1 79 152 196 270 1.39e-14 69.3
MsG0480021465.01.T01 MTR_5g076660 68.493 73 23 0 1 73 266 338 8.88e-27 103
MsG0480021465.01.T01 MTR_5g076660 49.275 69 35 0 79 147 268 336 1.60e-13 67.0
MsG0480021465.01.T01 MTR_5g067400 68.421 76 24 0 1 76 241 316 3.98e-25 98.2
MsG0480021465.01.T01 MTR_5g067400 47.297 74 39 0 79 152 243 316 9.39e-13 64.7
MsG0480021465.01.T01 MTR_5g061310 60.000 75 30 0 1 75 2 76 4.25e-25 92.0
MsG0480021465.01.T01 MTR_5g061310 41.892 74 43 0 78 151 3 76 8.95e-14 63.2
MsG0480021465.01.T01 MTR_5g076370 64.384 73 26 0 1 73 267 339 1.07e-23 94.7
MsG0480021465.01.T01 MTR_5g076370 43.077 65 37 0 85 149 275 339 9.56e-11 58.9
MsG0480021465.01.T01 MTR_2g038430 61.333 75 29 0 1 75 268 342 7.76e-23 92.4
MsG0480021465.01.T01 MTR_5g076720 65.333 75 26 0 1 75 315 389 9.29e-23 92.8
MsG0480021465.01.T01 MTR_5g076505 61.333 75 29 0 1 75 240 314 1.42e-22 91.3
MsG0480021465.01.T01 MTR_1g046650 57.895 76 32 0 1 76 171 246 1.88e-22 89.7
MsG0480021465.01.T01 MTR_1g046650 40.541 74 44 0 79 152 173 246 8.70e-12 61.2
MsG0480021465.01.T01 MTR_2g038420 60.000 75 30 0 1 75 260 334 2.26e-22 91.3
MsG0480021465.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 3.50e-22 90.5
MsG0480021465.01.T01 MTR_1g046650 40.541 74 44 0 79 152 242 315 1.11e-11 61.6
MsG0480021465.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 5.02e-22 89.7
MsG0480021465.01.T01 MTR_1g046650 40.541 74 44 0 79 152 242 315 1.40e-11 61.2
MsG0480021465.01.T01 MTR_5g076740 59.211 76 30 1 1 75 86 161 5.65e-22 86.7
MsG0480021465.01.T01 MTR_1g046650 57.895 76 32 0 1 76 271 346 7.64e-22 89.7
MsG0480021465.01.T01 MTR_1g046650 40.541 74 44 0 79 152 273 346 1.64e-11 61.2
MsG0480021465.01.T01 MTR_7g094390 58.667 75 31 0 1 75 402 476 4.88e-21 88.6
MsG0480021465.01.T01 MTR_7g094390 43.243 74 42 0 78 151 403 476 7.96e-12 62.4
MsG0480021465.01.T01 MTR_5g076520 57.333 75 31 1 1 74 244 318 1.33e-19 83.6
MsG0480021465.01.T01 MTR_7g024290 60.526 76 29 1 1 75 241 316 9.43e-19 81.3
MsG0480021465.01.T01 MTR_4g009980 55.224 67 30 0 9 75 4 70 7.96e-18 73.2
MsG0480021465.01.T01 MTR_5g061290 53.333 75 35 0 1 75 252 326 1.11e-17 78.2
MsG0480021465.01.T01 MTR_3g091400 31.250 144 96 3 7 147 32 175 3.12e-16 75.1
MsG0480021465.01.T01 MTR_4g080783 72.917 48 13 0 44 91 7 54 3.87e-16 69.7
MsG0480021465.01.T01 MTR_5g076350 48.684 76 38 1 1 75 8 83 9.26e-16 68.2
MsG0480021465.01.T01 MTR_5g076760 58.621 58 24 0 10 67 4 61 3.08e-15 67.0
MsG0480021465.01.T01 MTR_5g076780 56.452 62 27 0 13 74 2 63 3.19e-15 66.6
MsG0480021465.01.T01 MTR_5g076340 50.649 77 36 2 1 75 9 85 3.58e-15 67.0
MsG0480021465.01.T01 MTR_7g117395 34.074 135 83 4 1 130 37 170 1.29e-14 70.5
MsG0480021465.01.T01 MTR_8g027610 34.437 151 87 6 3 145 38 184 1.58e-14 70.1
MsG0480021465.01.T01 MTR_8g099565 30.882 136 91 3 15 147 40 175 3.94e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021465.01.T01 AT1G31340 98.684 152 2 0 1 152 1 152 1.67e-105 298
MsG0480021465.01.T01 AT2G35635 98.026 152 3 0 1 152 1 152 1.37e-104 295
MsG0480021465.01.T01 AT2G35635 60.526 76 30 0 3 78 79 154 3.08e-25 94.7
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 1 152 4.37e-84 244
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 4.37e-84 244
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 1 152 6.73e-83 243
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 77 228 6.73e-83 243
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 1 152 6.73e-83 243
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 77 228 6.73e-83 243
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 1 152 6.73e-83 243
MsG0480021465.01.T01 AT4G05050 79.605 152 31 0 1 152 77 228 6.73e-83 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 1 152 6.73e-83 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 77 228 6.73e-83 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 1 152 6.73e-83 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 77 228 6.73e-83 243
MsG0480021465.01.T01 AT5G03240 79.085 153 32 0 1 153 153 305 4.38e-82 244
MsG0480021465.01.T01 AT5G03240 79.605 152 31 0 1 152 1 152 6.42e-82 244
MsG0480021465.01.T01 AT5G03240 79.605 152 31 0 1 152 77 228 6.42e-82 244
MsG0480021465.01.T01 AT5G03240 79.085 153 32 0 1 153 153 305 4.38e-82 244
MsG0480021465.01.T01 AT5G03240 79.605 152 31 0 1 152 1 152 6.42e-82 244
MsG0480021465.01.T01 AT5G03240 79.605 152 31 0 1 152 77 228 6.42e-82 244
MsG0480021465.01.T01 AT5G03240 79.085 153 32 0 1 153 153 305 4.38e-82 244
MsG0480021465.01.T01 AT5G03240 79.605 152 31 0 1 152 1 152 6.42e-82 244
MsG0480021465.01.T01 AT5G03240 79.605 152 31 0 1 152 77 228 6.42e-82 244
MsG0480021465.01.T01 AT5G20620 79.085 153 32 0 1 153 153 305 4.38e-82 244
MsG0480021465.01.T01 AT5G20620 79.605 152 31 0 1 152 1 152 6.42e-82 244
MsG0480021465.01.T01 AT5G20620 79.605 152 31 0 1 152 77 228 6.42e-82 244
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 7.74e-82 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 7.74e-82 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 7.74e-82 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 7.74e-82 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 7.74e-82 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 7.74e-82 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 1 152 7.74e-82 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 77 228 7.74e-82 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 153 304 7.74e-82 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 1 152 7.74e-82 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 77 228 7.74e-82 243
MsG0480021465.01.T01 AT4G02890 79.605 152 31 0 1 152 153 304 7.74e-82 243
MsG0480021465.01.T01 AT5G20620 79.085 153 32 0 1 153 229 381 4.72e-81 244
MsG0480021465.01.T01 AT5G20620 79.605 152 31 0 1 152 1 152 6.90e-81 244
MsG0480021465.01.T01 AT5G20620 79.605 152 31 0 1 152 77 228 6.90e-81 244
MsG0480021465.01.T01 AT5G20620 79.605 152 31 0 1 152 153 304 6.90e-81 244
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 229 380 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 229 380 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 7.55e-81 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 229 380 7.55e-81 243
MsG0480021465.01.T01 AT1G55060 77.124 153 35 0 1 153 77 229 1.94e-80 237
MsG0480021465.01.T01 AT1G55060 73.026 152 41 0 1 152 1 152 1.88e-76 227
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 229 380 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 305 456 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 1 152 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 77 228 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 153 304 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 229 380 5.97e-80 243
MsG0480021465.01.T01 AT4G05320 79.605 152 31 0 1 152 305 456 5.97e-80 243
MsG0480021465.01.T01 AT1G65350 78.947 152 31 1 1 152 1 151 8.90e-79 236
MsG0480021465.01.T01 AT1G65350 78.289 152 32 1 1 152 77 227 9.16e-78 234
MsG0480021465.01.T01 AT1G65350 70.060 167 36 1 1 153 152 318 6.33e-74 224
MsG0480021465.01.T01 AT5G37640 75.658 152 37 0 1 152 79 230 4.73e-78 234
MsG0480021465.01.T01 AT5G37640 73.203 153 40 1 1 152 155 307 1.37e-71 218
MsG0480021465.01.T01 AT5G37640 68.421 152 48 0 1 152 3 154 2.79e-68 209
MsG0480021465.01.T01 AT3G09790 69.737 152 46 0 1 152 3 154 9.18e-66 211
MsG0480021465.01.T01 AT3G09790 64.557 158 49 2 1 151 79 236 2.62e-59 194
MsG0480021465.01.T01 AT3G09790 57.962 157 59 1 1 150 469 625 2.40e-48 165
MsG0480021465.01.T01 AT3G09790 54.088 159 66 1 1 152 393 551 2.50e-48 164
MsG0480021465.01.T01 AT3G09790 58.599 157 58 2 1 150 238 394 4.44e-48 164
MsG0480021465.01.T01 AT3G09790 57.143 154 60 2 1 152 319 468 1.50e-46 160
MsG0480021465.01.T01 AT3G09790 53.659 164 64 3 1 152 155 318 5.80e-46 158
MsG0480021465.01.T01 AT3G09790 69.737 152 46 0 1 152 3 154 9.18e-66 211
MsG0480021465.01.T01 AT3G09790 64.557 158 49 2 1 151 79 236 2.62e-59 194
MsG0480021465.01.T01 AT3G09790 57.962 157 59 1 1 150 469 625 2.40e-48 165
MsG0480021465.01.T01 AT3G09790 54.088 159 66 1 1 152 393 551 2.50e-48 164
MsG0480021465.01.T01 AT3G09790 58.599 157 58 2 1 150 238 394 4.44e-48 164
MsG0480021465.01.T01 AT3G09790 57.143 154 60 2 1 152 319 468 1.50e-46 160
MsG0480021465.01.T01 AT3G09790 53.659 164 64 3 1 152 155 318 5.80e-46 158
MsG0480021465.01.T01 AT3G52590 98.684 76 1 0 1 76 1 76 5.40e-49 154
MsG0480021465.01.T01 AT3G52590 62.162 74 28 0 79 152 3 76 1.88e-26 97.1
MsG0480021465.01.T01 AT2G36170 98.684 76 1 0 1 76 1 76 5.40e-49 154
MsG0480021465.01.T01 AT2G36170 62.162 74 28 0 79 152 3 76 1.88e-26 97.1
MsG0480021465.01.T01 AT1G23410 98.684 76 1 0 1 76 1 76 2.15e-48 154
MsG0480021465.01.T01 AT1G23410 62.162 74 28 0 79 152 3 76 4.35e-26 97.1
MsG0480021465.01.T01 AT2G47110 97.403 77 2 0 1 77 1 77 2.50e-48 153
MsG0480021465.01.T01 AT2G47110 62.162 74 28 0 79 152 3 76 4.32e-26 97.1
MsG0480021465.01.T01 AT2G47110 97.403 77 2 0 1 77 1 77 2.50e-48 153
MsG0480021465.01.T01 AT2G47110 62.162 74 28 0 79 152 3 76 4.32e-26 97.1
MsG0480021465.01.T01 AT3G62250 97.403 77 2 0 1 77 1 77 2.53e-48 153
MsG0480021465.01.T01 AT3G62250 62.162 74 28 0 79 152 3 76 4.61e-26 97.1
MsG0480021465.01.T01 AT1G11980 79.730 74 15 0 79 152 3 76 2.28e-36 120
MsG0480021465.01.T01 AT1G11980 53.846 78 36 0 1 78 1 78 6.49e-24 89.0
MsG0480021465.01.T01 AT1G53930 73.973 73 19 0 1 73 86 158 3.24e-32 112
MsG0480021465.01.T01 AT1G53930 37.037 162 72 7 8 146 1 155 5.56e-20 81.3
MsG0480021465.01.T01 AT1G53950 61.333 75 29 0 1 75 69 143 1.38e-25 95.5
MsG0480021465.01.T01 AT1G53950 36.709 158 59 3 1 151 20 143 6.23e-17 73.2
MsG0480021465.01.T01 AT2G46500 32.639 144 94 2 7 147 40 183 2.39e-18 80.9
MsG0480021465.01.T01 AT2G46500 32.639 144 94 2 7 147 40 183 4.56e-18 80.1
MsG0480021465.01.T01 AT2G46500 32.639 144 94 2 7 147 40 183 4.56e-18 80.1
MsG0480021465.01.T01 AT5G24240 30.822 146 96 3 7 148 38 182 1.95e-14 69.7
MsG0480021465.01.T01 AT5G24240 30.822 146 96 3 7 148 38 182 1.95e-14 69.7
MsG0480021465.01.T01 AT1G53945 44.776 67 37 0 1 67 46 112 3.92e-12 60.1
MsG0480021465.01.T01 AT4G12570 38.667 75 45 1 1 74 95 169 6.85e-12 62.8
MsG0480021465.01.T01 AT5G42220 38.889 72 44 0 1 72 24 95 6.95e-11 59.7
MsG0480021465.01.T01 AT5G42220 38.889 72 44 0 1 72 24 95 6.95e-11 59.7

Find 50 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTCGTCGTTCTTTCT+TGG 0.186573 4:+58179590 None:intergenic
CTCGAGAGTGATAGTCTTTC+CGG 0.212687 4:+58179532 None:intergenic
CTTGGTCACTTTCTAGTTCT+TGG 0.254399 4:-58176102 MsG0480021465.01.T01:three_prime_UTR
GAGCTTCCTTTCATGTCTTT+AGG 0.290193 4:+58176054 None:intergenic
ATTAAAGTGAAGACTTTAAC+TGG 0.293921 4:-58178427 MsG0480021465.01.T01:CDS
TTCACTTGGTCCTGAGGCTC+AGG 0.315783 4:-58178462 MsG0480021465.01.T01:CDS
TATAAATTTGGGGTAACTAT+TGG 0.336842 4:-58175982 MsG0480021465.01.T01:three_prime_UTR
TCACTTGGTGCTTGCATTGA+GGG 0.346912 4:-58176181 MsG0480021465.01.T01:CDS
TGGTTCCTCCCCTGAGCCTC+AGG 0.411655 4:+58178452 None:intergenic
AAAATCAACCTCTGCTGCTC+AGG 0.422345 4:+58178550 None:intergenic
AGAGAGAACCTCTGCTGCAC+AGG 0.431937 4:+58178322 None:intergenic
TAAAGTCTTCACTTTAATCA+TGG 0.437603 4:+58178432 None:intergenic
TTCACTTGGTGCTTGCATTG+AGG 0.449045 4:-58176182 MsG0480021465.01.T01:CDS
TTGAGGGGTGGTAATTAGTA+AGG 0.455140 4:-58176165 MsG0480021465.01.T01:exon
TCACTTGGTCCTGAGGCTCA+GGG 0.466413 4:-58178461 MsG0480021465.01.T01:CDS
GGGTGGTTCTGTGCTTCACT+TGG 0.473264 4:-58176196 MsG0480021465.01.T01:CDS
ATCTTCGTCAAAACTTTGAC+CGG 0.482710 4:-58179551 MsG0480021465.01.T01:CDS
ATACGATCAATTGTATCAGT+TGG 0.484906 4:+58178379 None:intergenic
CACTTGGTGCTTGCATTGAG+GGG 0.485261 4:-58176180 MsG0480021465.01.T01:CDS
AAATTTGGGGTAACTATTGG+TGG 0.492106 4:-58175979 MsG0480021465.01.T01:three_prime_UTR
ACCCTAACTAACCTGGATCT+TGG 0.496140 4:+58179475 None:intergenic
CAACGTCAAGGCCAAGATCC+AGG 0.500226 4:-58179486 MsG0480021465.01.T01:intron
ATCAACCTCTGCTGCTCAGG+AGG 0.505519 4:+58178553 None:intergenic
AGAGCGCGATAGAGACAGAA+AGG 0.507710 4:+58179620 None:intergenic
GACATTAGCTTGTTTAGACT+TGG 0.510967 4:-58176120 MsG0480021465.01.T01:three_prime_UTR
TGCTGATTACAACATACAAA+AGG 0.513784 4:-58178494 MsG0480021465.01.T01:CDS
TGCTGCAGGCTCATATATGC+TGG 0.530859 4:-58176264 MsG0480021465.01.T01:intron
GAGAACCTCTGCTGCACAGG+TGG 0.536260 4:+58178325 None:intergenic
GAACATTATGTCCTCAGAGA+TGG 0.542044 4:+58176022 None:intergenic
CTTGGCCTTGACGTTGTCGA+TGG 0.546175 4:+58179493 None:intergenic
ACAAGCTAATGTCTTGAGAT+CGG 0.547092 4:+58176130 None:intergenic
CAACTCTTCACTTGGTCCTG+AGG 0.549503 4:-58178468 MsG0480021465.01.T01:CDS
TGATACAATTGATCGTATCA+AGG 0.564246 4:-58178374 MsG0480021465.01.T01:CDS
GCTAAAGAGTACAACATTGA+GGG 0.566179 4:-58176216 MsG0480021465.01.T01:CDS
GCTGGTAAGCAACTGGAAGA+TGG 0.571114 4:-58178526 MsG0480021465.01.T01:CDS
GAATTCCACCTGTGCAGCAG+AGG 0.571422 4:-58178330 MsG0480021465.01.T01:intron
CACTTGGTCCTGAGGCTCAG+GGG 0.571962 4:-58178460 MsG0480021465.01.T01:CDS
AGCTAAAGAGTACAACATTG+AGG 0.583787 4:-58176217 MsG0480021465.01.T01:CDS
GAGCGCGATAGAGACAGAAA+GGG 0.587611 4:+58179621 None:intergenic
AAAGGAATCAACTCTTCACT+TGG 0.589580 4:-58178476 MsG0480021465.01.T01:CDS
GCATCCCTCCTGAGCAGCAG+AGG 0.589597 4:-58178558 MsG0480021465.01.T01:CDS
TCAACCTCTGCTGCTCAGGA+GGG 0.618275 4:+58178554 None:intergenic
TTGGTGCTTGCATTGAGGGG+TGG 0.618700 4:-58176177 MsG0480021465.01.T01:CDS
TCTGAACCTAAAGACATGAA+AGG 0.620725 4:-58176060 MsG0480021465.01.T01:three_prime_UTR
TTGGTCCTGAGGCTCAGGGG+AGG 0.642200 4:-58178457 MsG0480021465.01.T01:CDS
ATGTTGTTGTAGGACAAAGA+AGG 0.653254 4:-58178580 MsG0480021465.01.T01:intron
CGACACCATCGACAACGTCA+AGG 0.661901 4:-58179498 MsG0480021465.01.T01:CDS
CGGAAAGACTATCACTCTCG+AGG 0.665568 4:-58179531 MsG0480021465.01.T01:CDS
TCTATACTCGTCCATCTCTG+AGG 0.673542 4:-58176033 MsG0480021465.01.T01:three_prime_UTR
AAAGAGTACAACATTGAGGG+TGG 0.697133 4:-58176213 MsG0480021465.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATATAAATATAAATGTA+TGG - Chr4:58177559-58177578 MsG0480021465.01.T01:intron 10.0%
!! TTCTCATAATAAAAAAATTA+TGG + Chr4:58178416-58178435 None:intergenic 10.0%
!! AATTTAAGAGTTATAACATT+TGG + Chr4:58177329-58177348 None:intergenic 15.0%
!! GTTAAGAGATTTATTTATTT+AGG - Chr4:58178791-58178810 MsG0480021465.01.T01:intron 15.0%
!!! ACTTTTGAATTGAAAATTAT+TGG - Chr4:58177742-58177761 MsG0480021465.01.T01:intron 15.0%
!!! CTTTTAGTATGATTTTTTTT+CGG - Chr4:58178349-58178368 MsG0480021465.01.T01:CDS 15.0%
!!! TTTTAGTATGATTTTTTTTC+GGG - Chr4:58178350-58178369 MsG0480021465.01.T01:CDS 15.0%
!! CGAAAAAAAATCATACTAAA+AGG + Chr4:58178351-58178370 None:intergenic 20.0%
!! GAAAAAACCCTTAAAATAAA+TGG + Chr4:58176161-58176180 None:intergenic 20.0%
!! TAAGCATATAAAAGAATGTT+TGG - Chr4:58177673-58177692 MsG0480021465.01.T01:intron 20.0%
!! TACAAATCATTAGAGAAATA+AGG - Chr4:58178015-58178034 MsG0480021465.01.T01:intron 20.0%
!!! TGCATGAATATTTAACTTAT+AGG + Chr4:58177703-58177722 None:intergenic 20.0%
!!! TGTTTTTTAAAGTTTAGAAC+AGG + Chr4:58178204-58178223 None:intergenic 20.0%
!!! TTATTTCTCTAATGATTTGT+AGG + Chr4:58178016-58178035 None:intergenic 20.0%
!!! TTTTCAATTCAAAAGTCAAA+CGG + Chr4:58177738-58177757 None:intergenic 20.0%
! AAATCCATGCATTTATTCAT+TGG - Chr4:58177434-58177453 MsG0480021465.01.T01:intron 25.0%
! ACGTCATATAAAACAGATAA+AGG + Chr4:58176878-58176897 None:intergenic 25.0%
! AGCTTAGTTTCAGTTTATTT+GGG + Chr4:58176849-58176868 None:intergenic 25.0%
! ATCTAGTATTTCACAAACAT+CGG - Chr4:58178669-58178688 MsG0480021465.01.T01:intron 25.0%
! ATTAAAGTGAAGACTTTAAC+TGG - Chr4:58177141-58177160 MsG0480021465.01.T01:intron 25.0%
! CATATAAAAGAATGTTTGGA+GGG - Chr4:58177677-58177696 MsG0480021465.01.T01:intron 25.0%
! CCAAAAATCATATTAAACAG+AGG + Chr4:58177631-58177650 None:intergenic 25.0%
! GTGTAATATGAGTAAATCTA+TGG + Chr4:58178285-58178304 None:intergenic 25.0%
! TAAAGTCTTCACTTTAATCA+TGG + Chr4:58177139-58177158 None:intergenic 25.0%
! TAGCTTAGTTTCAGTTTATT+TGG + Chr4:58176850-58176869 None:intergenic 25.0%
! TCAAAAAATTTCAGTTCAGA+AGG - Chr4:58178383-58178402 MsG0480021465.01.T01:CDS 25.0%
! TTAAAAAATAGCACATAGAC+AGG + Chr4:58176775-58176794 None:intergenic 25.0%
! TTCAGTTAATTGTTTGAGAA+GGG + Chr4:58178547-58178566 None:intergenic 25.0%
! TTTATCTGCCAAAATAATAC+TGG + Chr4:58177406-58177425 None:intergenic 25.0%
! TTTCAGTTAATTGTTTGAGA+AGG + Chr4:58178548-58178567 None:intergenic 25.0%
!! ATAATGTTCTTTTATGTGCT+TGG - Chr4:58179560-58179579 MsG0480021465.01.T01:CDS 25.0%
!! ATGATATTTAAGAAAAGTGC+TGG + Chr4:58176447-58176466 None:intergenic 25.0%
!! ATTATCTGCCAGTATTATTT+TGG - Chr4:58177395-58177414 MsG0480021465.01.T01:intron 25.0%
!! CCTCTGTTTAATATGATTTT+TGG - Chr4:58177628-58177647 MsG0480021465.01.T01:intron 25.0%
!! GTATTTCTTGTTTACATAGT+TGG + Chr4:58177987-58178006 None:intergenic 25.0%
!! TATAAATTTGGGGTAACTAT+TGG - Chr4:58179586-58179605 MsG0480021465.01.T01:five_prime_UTR 25.0%
!! TCATCAGTTTCAATTCTTTT+TGG - Chr4:58178131-58178150 MsG0480021465.01.T01:intron 25.0%
!! TTGTATCTTTTGAATATCCA+GGG - Chr4:58178921-58178940 MsG0480021465.01.T01:intron 25.0%
!!! ATTATGAAGAGAACTAGTTT+TGG + Chr4:58176288-58176307 None:intergenic 25.0%
!!! GCTTACTCCATTTATTTTAA+GGG - Chr4:58176151-58176170 MsG0480021465.01.T01:exon 25.0%
!!! GTGCTTGGTTTTATAAATTT+GGG - Chr4:58179575-58179594 MsG0480021465.01.T01:exon 25.0%
!!! TGATTAAGATACCACTTTTT+GGG + Chr4:58179639-58179658 None:intergenic 25.0%
!!! TGCTTACTCCATTTATTTTA+AGG - Chr4:58176150-58176169 MsG0480021465.01.T01:three_prime_UTR 25.0%
!!! TGCTTGGTTTTATAAATTTG+GGG - Chr4:58179576-58179595 MsG0480021465.01.T01:exon 25.0%
!!! TGTGCTTGGTTTTATAAATT+TGG - Chr4:58179574-58179593 MsG0480021465.01.T01:exon 25.0%
!!! TTATGAAGAGAACTAGTTTT+GGG + Chr4:58176287-58176306 None:intergenic 25.0%
!!! TTGATTAAGATACCACTTTT+TGG + Chr4:58179640-58179659 None:intergenic 25.0%
!!! TTTTAAAGCTTACTCATGTA+AGG - Chr4:58177476-58177495 MsG0480021465.01.T01:intron 25.0%
ACTGTTAACTTATGTGTGTT+AGG - Chr4:58176240-58176259 MsG0480021465.01.T01:CDS 30.0%
ATAAACTGAAACTAAGCTAC+AGG - Chr4:58176851-58176870 MsG0480021465.01.T01:intron 30.0%
ATACGATCAATTGTATCAGT+TGG + Chr4:58177192-58177211 None:intergenic 30.0%
GCACATAGATAGTATTAATG+CGG - Chr4:58177951-58177970 MsG0480021465.01.T01:intron 30.0%
GCATATAAAAGAATGTTTGG+AGG - Chr4:58177676-58177695 MsG0480021465.01.T01:intron 30.0%
GTTTGTGAAATACTAGATAC+TGG + Chr4:58178667-58178686 None:intergenic 30.0%
TAAACTGAAACTAAGCTACA+GGG - Chr4:58176852-58176871 MsG0480021465.01.T01:intron 30.0%
TCTATAAGATTTAGTGATCC+TGG - Chr4:58176643-58176662 MsG0480021465.01.T01:intron 30.0%
TGAACCAATGAATAAATGCA+TGG + Chr4:58177441-58177460 None:intergenic 30.0%
TGAATATCAGATCGTATACA+TGG - Chr4:58176471-58176490 MsG0480021465.01.T01:intron 30.0%
TGATACAATTGATCGTATCA+AGG - Chr4:58177194-58177213 MsG0480021465.01.T01:intron 30.0%
! ATGCTTTTAAACCCAAAAAG+TGG - Chr4:58179625-58179644 MsG0480021465.01.T01:five_prime_UTR 30.0%
! CTTGTATCTTTTGAATATCC+AGG - Chr4:58178920-58178939 MsG0480021465.01.T01:intron 30.0%
! TGCTGATTACAACATACAAA+AGG - Chr4:58177074-58177093 MsG0480021465.01.T01:intron 30.0%
!! ATTTGGTGCTAATTAGAACT+GGG - Chr4:58178885-58178904 MsG0480021465.01.T01:intron 30.0%
!! TAGCGGATACTAATATTTTG+AGG + Chr4:58178582-58178601 None:intergenic 30.0%
!!! TACACGACTGGTTTTTTAAA+AGG + Chr4:58178317-58178336 None:intergenic 30.0%
!!! TAGAACAGGTTTTGAAAAAC+CGG + Chr4:58178190-58178209 None:intergenic 30.0%
AAAATCCCTCTTCTCATCAT+AGG + Chr4:58178069-58178050 None:intergenic 35.0%
AAAGGAATCAACTCTTCACT+TGG - Chr4:58177092-58177111 MsG0480021465.01.T01:intron 35.0%
AACATAAACAACTCAAAGCC+AGG + Chr4:58176664-58176683 None:intergenic 35.0%
AACTTGATCTCAAATCTCCT+CGG - Chr4:58177836-58177855 MsG0480021465.01.T01:intron 35.0%
ACAAGCTAATGTCTTGAGAT+CGG + Chr4:58179441-58179460 None:intergenic 35.0%
AGATAGTATTAATGCGGATC+TGG - Chr4:58177957-58177976 MsG0480021465.01.T01:intron 35.0%
ATAATGTGTGAAGTCTGTAC+CGG + Chr4:58178643-58178662 None:intergenic 35.0%
ATCGCATGCAAACATGAAAT+CGG - Chr4:58176604-58176623 MsG0480021465.01.T01:intron 35.0%
ATCTTCGTCAAAACTTTGAC+CGG - Chr4:58176017-58176036 MsG0480021465.01.T01:three_prime_UTR 35.0%
ATGGTTGTACTGCAATTCTA+GGG + Chr4:58178266-58178285 None:intergenic 35.0%
ATGTTGTTGTAGGACAAAGA+AGG - Chr4:58176988-58177007 MsG0480021465.01.T01:intron 35.0%
CAAACTAGAGGATGCTTATT+GGG + Chr4:58178505-58178524 None:intergenic 35.0%
CAATTAAGCTATTCACCTTG+AGG - Chr4:58178727-58178746 MsG0480021465.01.T01:intron 35.0%
CATAAAGTTATGTAGATCCC+TGG + Chr4:58178941-58178960 None:intergenic 35.0%
CATTCATTTGTAACTGCTAG+TGG - Chr4:58176962-58176981 MsG0480021465.01.T01:intron 35.0%
CGAAAGTTATTGTACTCTTC+CGG - Chr4:58178621-58178640 MsG0480021465.01.T01:intron 35.0%
CTAGTGGAATATGTTGTTGT+AGG - Chr4:58176978-58176997 MsG0480021465.01.T01:intron 35.0%
GAAACTGATGAATAACACCA+AGG + Chr4:58178122-58178141 None:intergenic 35.0%
GAGCCGCATATTGAAATAAA+TGG + Chr4:58176405-58176424 None:intergenic 35.0%
GAGTGAAATCACAAAATCGT+GGG + Chr4:58176546-58176565 None:intergenic 35.0%
GAGTTGGATTGCATATTTAC+TGG - Chr4:58179050-58179069 MsG0480021465.01.T01:intron 35.0%
GATCTCTTAGTAATAACGAG+AGG - Chr4:58176364-58176383 MsG0480021465.01.T01:intron 35.0%
GGGCCATTTATTTCAATATG+CGG - Chr4:58176399-58176418 MsG0480021465.01.T01:intron 35.0%
GTATTGCCTATGAATGAAGA+GGG - Chr4:58178847-58178866 MsG0480021465.01.T01:intron 35.0%
GTATTTCACAAACATCGGTA+TGG - Chr4:58178674-58178693 MsG0480021465.01.T01:intron 35.0%
GTTTCAGCTTCATTTCTGTT+TGG - Chr4:58178153-58178172 MsG0480021465.01.T01:intron 35.0%
GTTTGAAAACTATACACGAC+TGG + Chr4:58178329-58178348 None:intergenic 35.0%
TATGGTTGTACTGCAATTCT+AGG + Chr4:58178267-58178286 None:intergenic 35.0%
TCAAACTAGAGGATGCTTAT+TGG + Chr4:58178506-58178525 None:intergenic 35.0%
TCTGAACCTAAAGACATGAA+AGG - Chr4:58179508-58179527 MsG0480021465.01.T01:CDS 35.0%
TGAGTGAAATCACAAAATCG+TGG + Chr4:58176547-58176566 None:intergenic 35.0%
TGTATTGCCTATGAATGAAG+AGG - Chr4:58178846-58178865 MsG0480021465.01.T01:intron 35.0%
TTATACAAGCTTCATCGAGT+TGG - Chr4:58179034-58179053 MsG0480021465.01.T01:intron 35.0%
TTCAAAAGTCAAACGGTGTA+TGG + Chr4:58177731-58177750 None:intergenic 35.0%
TTGATTCTGACGCTTTAATC+TGG - Chr4:58179153-58179172 MsG0480021465.01.T01:intron 35.0%
! AAATTTGGGGTAACTATTGG+TGG - Chr4:58179589-58179608 MsG0480021465.01.T01:five_prime_UTR 35.0%
! AGCTAAAGAGTACAACATTG+AGG - Chr4:58179351-58179370 MsG0480021465.01.T01:intron 35.0%
! AGGACAGGGTTAATGTTTTT+GGG - Chr4:58178747-58178766 MsG0480021465.01.T01:intron 35.0%
! ATGATGAGAAGAGGGATTTT+AGG - Chr4:58177798-58177817 MsG0480021465.01.T01:intron 35.0%
! GCTAAAGAGTACAACATTGA+GGG - Chr4:58179352-58179371 MsG0480021465.01.T01:intron 35.0%
! TCAAAATTTCGAGTCTGCTA+GGG - Chr4:58176179-58176198 MsG0480021465.01.T01:CDS 35.0%
! TCATTTTCTCCATCAACTGT+GGG - Chr4:58178448-58178467 MsG0480021465.01.T01:CDS 35.0%
! TGATGAGAAGAGGGATTTTA+GGG - Chr4:58177799-58177818 MsG0480021465.01.T01:intron 35.0%
! TGCACTGATATGATAGAAAG+CGG + Chr4:58178987-58179006 None:intergenic 35.0%
! TTCAAAATTTCGAGTCTGCT+AGG - Chr4:58176178-58176197 MsG0480021465.01.T01:CDS 35.0%
!! CATTTGGTGCTAATTAGAAC+TGG - Chr4:58178884-58178903 MsG0480021465.01.T01:intron 35.0%
!! GACATTAGCTTGTTTAGACT+TGG - Chr4:58179448-58179467 MsG0480021465.01.T01:intron 35.0%
!! GAGTAAGCTTTAAAAGTGAG+CGG + Chr4:58177471-58177490 None:intergenic 35.0%
!! GATTTTTGGATGCTTCATCT+AGG - Chr4:58177642-58177661 MsG0480021465.01.T01:intron 35.0%
!! TGGGTTTTCACGATTTTGAT+CGG + Chr4:58176527-58176546 None:intergenic 35.0%
!! TTAGTATCCGCTATTTCTAG+TGG - Chr4:58178589-58178608 MsG0480021465.01.T01:intron 35.0%
!!! ATGTTTTAGCTTTCTTCGCT+AGG - Chr4:58179208-58179227 MsG0480021465.01.T01:intron 35.0%
!!! ATTGTGTGCCTTTTAGAGTT+GGG - Chr4:58176329-58176348 MsG0480021465.01.T01:intron 35.0%
!!! CTCTCTCTCTCATGTTTTTT+GGG - Chr4:58177287-58177306 MsG0480021465.01.T01:intron 35.0%
!!! TCTCTCTCTCTCATGTTTTT+TGG - Chr4:58177286-58177305 MsG0480021465.01.T01:intron 35.0%
AAACATTAACCCTGTCCTCA+AGG + Chr4:58178745-58178764 None:intergenic 40.0%
AATCCCTCTTCTCATCATAG+TGG - Chr4:58178052-58178071 MsG0480021465.01.T01:intron 40.0%
ATGAGAAACCCTAACTAACC+TGG + Chr4:58176103-58176122 None:intergenic 40.0%
CATGACACCACTAGAAATAG+CGG + Chr4:58178599-58178618 None:intergenic 40.0%
CTAGACCTAGAAACTAGTTC+AGG + Chr4:58177895-58177914 None:intergenic 40.0%
CTCATGTAAGGATTTACTCG+AGG - Chr4:58177488-58177507 MsG0480021465.01.T01:intron 40.0%
GAACATTATGTCCTCAGAGA+TGG + Chr4:58179549-58179568 None:intergenic 40.0%
GAGCGTGTTGAAGAAAAAGA+AGG - Chr4:58177216-58177235 MsG0480021465.01.T01:intron 40.0%
GAGCTTCCTTTCATGTCTTT+AGG + Chr4:58179517-58179536 None:intergenic 40.0%
GCAGTAGCATGGATCAATTA+AGG + Chr4:58176816-58176835 None:intergenic 40.0%
GTGTTAGGTATCACAGAACT+AGG - Chr4:58176255-58176274 MsG0480021465.01.T01:CDS 40.0%
TCAATGCCCTCTTCATTCAT+AGG + Chr4:58178856-58178875 None:intergenic 40.0%
TCCATGCTACTGCAATAGAT+TGG - Chr4:58176823-58176842 MsG0480021465.01.T01:intron 40.0%
TGACTGAGTTTGTCTGTTAG+AGG - Chr4:58176903-58176922 MsG0480021465.01.T01:intron 40.0%
TGCTAATTAGAACTGGGACT+AGG - Chr4:58178891-58178910 MsG0480021465.01.T01:intron 40.0%
TGTTGCCTATGATGAGAAGA+GGG - Chr4:58177790-58177809 MsG0480021465.01.T01:intron 40.0%
TTCCCATTCCCAACTCTAAA+AGG + Chr4:58176340-58176359 None:intergenic 40.0%
TTCTTCTCGTCGTTCTTTCT+TGG + Chr4:58175981-58176000 None:intergenic 40.0%
TTGAGGGGTGGTAATTAGTA+AGG - Chr4:58179403-58179422 MsG0480021465.01.T01:intron 40.0%
TTTGTCTGTTAGAGGACAAG+TGG - Chr4:58176911-58176930 MsG0480021465.01.T01:intron 40.0%
! AAAGAGTACAACATTGAGGG+TGG - Chr4:58179355-58179374 MsG0480021465.01.T01:intron 40.0%
! AACGAGAGGTTATTGCTGTT+TGG - Chr4:58176378-58176397 MsG0480021465.01.T01:intron 40.0%
! ACAGAAAGTATGCAAATCCG+AGG + Chr4:58177856-58177875 None:intergenic 40.0%
! ATCCTCTAGTTTGATCACTG+AGG - Chr4:58178512-58178531 MsG0480021465.01.T01:CDS 40.0%
! CTCAACCTGAACTAGTTTCT+AGG - Chr4:58177887-58177906 MsG0480021465.01.T01:intron 40.0%
! CTCATTTTCTCCATCAACTG+TGG - Chr4:58178447-58178466 MsG0480021465.01.T01:CDS 40.0%
! CTGTTTGGCTTAGACAAAAC+CGG - Chr4:58178168-58178187 MsG0480021465.01.T01:intron 40.0%
! GAGGACAGGGTTAATGTTTT+TGG - Chr4:58178746-58178765 MsG0480021465.01.T01:intron 40.0%
! TGTTTGCATGCGATTTTGCA+CGG + Chr4:58176598-58176617 None:intergenic 40.0%
!! ACGAGAGGTTATTGCTGTTT+GGG - Chr4:58176379-58176398 MsG0480021465.01.T01:intron 40.0%
!! ATTGGGAAAAGTGCTGTCTA+CGG + Chr4:58178488-58178507 None:intergenic 40.0%
!! CTTGGTCACTTTCTAGTTCT+TGG - Chr4:58179466-58179485 MsG0480021465.01.T01:intron 40.0%
!! GCTATTTCTAGTGGTGTCAT+GGG - Chr4:58178598-58178617 MsG0480021465.01.T01:intron 40.0%
!! GGGTTTTCACGATTTTGATC+GGG + Chr4:58176526-58176545 None:intergenic 40.0%
!!! ACAGGGTTAATGTTTTTGGG+TGG - Chr4:58178750-58178769 MsG0480021465.01.T01:intron 40.0%
!!! AGGGTTAATGTTTTTGGGTG+GGG - Chr4:58178752-58178771 MsG0480021465.01.T01:intron 40.0%
!!! CAGGGTTAATGTTTTTGGGT+GGG - Chr4:58178751-58178770 MsG0480021465.01.T01:intron 40.0%
!!! GATTGTGTGCCTTTTAGAGT+TGG - Chr4:58176328-58176347 MsG0480021465.01.T01:intron 40.0%
!!! TCTCTCATGTTTTTTGGGCT+TGG - Chr4:58177292-58177311 MsG0480021465.01.T01:intron 40.0%
!!! TGCCTTTTAGAGTTGGGAAT+GGG - Chr4:58176335-58176354 MsG0480021465.01.T01:intron 40.0%
AAAATCAACCTCTGCTGCTC+AGG + Chr4:58177021-58177040 None:intergenic 45.0%
AAGCTATTCACCTTGAGGAC+AGG - Chr4:58178732-58178751 MsG0480021465.01.T01:intron 45.0%
ACCCTAACTAACCTGGATCT+TGG + Chr4:58176096-58176115 None:intergenic 45.0%
ACTCAACTCAGCATCAGTAG+CGG + Chr4:58176570-58176589 None:intergenic 45.0%
AGCTATTCACCTTGAGGACA+GGG - Chr4:58178733-58178752 MsG0480021465.01.T01:intron 45.0%
CCACCACTATGATGAGAAGA+GGG + Chr4:58178058-58178077 None:intergenic 45.0%
CCTCTTCTCATCATAGTGGT+GGG - Chr4:58178056-58178075 MsG0480021465.01.T01:intron 45.0%
CTCCTCAGTGATCAAACTAG+AGG + Chr4:58178517-58178536 None:intergenic 45.0%
CTCGAGAGTGATAGTCTTTC+CGG + Chr4:58176039-58176058 None:intergenic 45.0%
GCCAATCTATTGCAGTAGCA+TGG + Chr4:58176827-58176846 None:intergenic 45.0%
GTGTTGCCTATGATGAGAAG+AGG - Chr4:58177789-58177808 MsG0480021465.01.T01:intron 45.0%
TCTATACTCGTCCATCTCTG+AGG - Chr4:58179535-58179554 MsG0480021465.01.T01:CDS 45.0%
TTCATCGTGGTGCAAAGCAT+CGG - Chr4:58178087-58178106 MsG0480021465.01.T01:intron 45.0%
TTTGCACCACGATGAATCAG+AGG + Chr4:58178083-58178102 None:intergenic 45.0%
! GATTTTCGCTGGTAAGCAAC+TGG - Chr4:58177035-58177054 MsG0480021465.01.T01:intron 45.0%
! GCCAAGATCCAGGTTAGTTA+GGG - Chr4:58176092-58176111 MsG0480021465.01.T01:three_prime_UTR 45.0%
! GGAGTATTTCCCACAGTTGA+TGG + Chr4:58178460-58178479 None:intergenic 45.0%
!! AGTGCTGGCTGATGACTATA+AGG + Chr4:58176432-58176451 None:intergenic 45.0%
!! CGCTATTTCTAGTGGTGTCA+TGG - Chr4:58178597-58178616 MsG0480021465.01.T01:intron 45.0%
!! GAATGAAGAGGGCATTGAGA+GGG - Chr4:58178858-58178877 MsG0480021465.01.T01:intron 45.0%
!! TCACTTGGTGCTTGCATTGA+GGG - Chr4:58179387-58179406 MsG0480021465.01.T01:intron 45.0%
!! TGAATGAAGAGGGCATTGAG+AGG - Chr4:58178857-58178876 MsG0480021465.01.T01:intron 45.0%
!! TGATCGGGATTTTGACAGCA+AGG + Chr4:58176511-58176530 None:intergenic 45.0%
!! TTCACTTGGTGCTTGCATTG+AGG - Chr4:58179386-58179405 MsG0480021465.01.T01:intron 45.0%
!!! GGGTTAATGTTTTTGGGTGG+GGG - Chr4:58178753-58178772 MsG0480021465.01.T01:intron 45.0%
!!! GTGCCTTTTAGAGTTGGGAA+TGG - Chr4:58176334-58176353 MsG0480021465.01.T01:intron 45.0%
!!! ATTTTTTTTCTTAATTATAT+TGG - Chr4:58179251-58179270 MsG0480021465.01.T01:intron 5.0%
AGAGCGCGATAGAGACAGAA+AGG + Chr4:58175951-58175970 None:intergenic 50.0%
AGCCTGCAGCAAGTTACAAC+AGG + Chr4:58179295-58179314 None:intergenic 50.0%
CAACTCTTCACTTGGTCCTG+AGG - Chr4:58177100-58177119 MsG0480021465.01.T01:intron 50.0%
CCCACCACTATGATGAGAAG+AGG + Chr4:58178059-58178078 None:intergenic 50.0%
CCCTCTTCTCATCATAGTGG+TGG - Chr4:58178055-58178074 MsG0480021465.01.T01:intron 50.0%
CGGAAAGACTATCACTCTCG+AGG - Chr4:58176037-58176056 MsG0480021465.01.T01:three_prime_UTR 50.0%
GAGCGCGATAGAGACAGAAA+GGG + Chr4:58175950-58175969 None:intergenic 50.0%
GCTGGTAAGCAACTGGAAGA+TGG - Chr4:58177042-58177061 MsG0480021465.01.T01:intron 50.0%
GGATTTACTCGAGGATCACG+TGG - Chr4:58177497-58177516 MsG0480021465.01.T01:intron 50.0%
TGCTGCAGGCTCATATATGC+TGG - Chr4:58179304-58179323 MsG0480021465.01.T01:intron 50.0%
! AGCATCGGAGTTCTGTTCCT+TGG - Chr4:58178102-58178121 MsG0480021465.01.T01:intron 50.0%
! GGCATTGAGAGGGAGTCATT+TGG - Chr4:58178868-58178887 MsG0480021465.01.T01:intron 50.0%
! GGCCAAGATCCAGGTTAGTT+AGG - Chr4:58176091-58176110 MsG0480021465.01.T01:three_prime_UTR 50.0%
!! CACCTGTTGTAACTTGCTGC+AGG - Chr4:58179290-58179309 MsG0480021465.01.T01:intron 50.0%
!! CACTTGGTGCTTGCATTGAG+GGG - Chr4:58179388-58179407 MsG0480021465.01.T01:intron 50.0%
!! CAGCAGAGGTTGATTTTCGC+TGG - Chr4:58177024-58177043 MsG0480021465.01.T01:intron 50.0%
!! TTGGGTGGGGGAGTATTGAT+AGG - Chr4:58178765-58178784 MsG0480021465.01.T01:intron 50.0%
ACTCGAGGATCACGTGGTCT+AGG - Chr4:58177503-58177522 MsG0480021465.01.T01:intron 55.0%
AGAGAGAACCTCTGCTGCAC+AGG + Chr4:58177249-58177268 None:intergenic 55.0%
ATCAACCTCTGCTGCTCAGG+AGG + Chr4:58177018-58177037 None:intergenic 55.0%
CAACGTCAAGGCCAAGATCC+AGG - Chr4:58176082-58176101 MsG0480021465.01.T01:three_prime_UTR 55.0%
CGACACCATCGACAACGTCA+AGG - Chr4:58176070-58176089 MsG0480021465.01.T01:three_prime_UTR 55.0%
GAATTCCACCTGTGCAGCAG+AGG - Chr4:58177238-58177257 MsG0480021465.01.T01:intron 55.0%
GTGGGTCCTCTGATTCATCG+TGG - Chr4:58178074-58178093 MsG0480021465.01.T01:intron 55.0%
TCAACCTCTGCTGCTCAGGA+GGG + Chr4:58177017-58177036 None:intergenic 55.0%
TCACTTGGTCCTGAGGCTCA+GGG - Chr4:58177107-58177126 MsG0480021465.01.T01:intron 55.0%
TTCACTTGGTCCTGAGGCTC+AGG - Chr4:58177106-58177125 MsG0480021465.01.T01:intron 55.0%
! GGGTGGTTCTGTGCTTCACT+TGG - Chr4:58179372-58179391 MsG0480021465.01.T01:intron 55.0%
! TTGGTGCTTGCATTGAGGGG+TGG - Chr4:58179391-58179410 MsG0480021465.01.T01:intron 55.0%
!! AAAGTGCTGTCTACGGCGGA+TGG + Chr4:58178481-58178500 None:intergenic 55.0%
!! CTTGGCCTTGACGTTGTCGA+TGG + Chr4:58176078-58176097 None:intergenic 55.0%
!! GGGAAAAGTGCTGTCTACGG+CGG + Chr4:58178485-58178504 None:intergenic 55.0%
CACTTGGTCCTGAGGCTCAG+GGG - Chr4:58177108-58177127 MsG0480021465.01.T01:intron 60.0%
GAGAACCTCTGCTGCACAGG+TGG + Chr4:58177246-58177265 None:intergenic 60.0%
GCATCCCTCCTGAGCAGCAG+AGG - Chr4:58177010-58177029 MsG0480021465.01.T01:intron 65.0%
TGGTTCCTCCCCTGAGCCTC+AGG + Chr4:58177119-58177138 None:intergenic 65.0%
TTGGTCCTGAGGCTCAGGGG+AGG - Chr4:58177111-58177130 MsG0480021465.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 58175911 58179679 58175911 ID=MsG0480021465.01;Name=MsG0480021465.01
Chr4 mRNA 58175911 58179679 58175911 ID=MsG0480021465.01.T01;Parent=MsG0480021465.01;Name=MsG0480021465.01.T01;_AED=0.39;_eAED=0.39;_QI=100|1|1|1|1|1|3|259|153
Chr4 exon 58175911 58176278 58175911 ID=MsG0480021465.01.T01:exon:19529;Parent=MsG0480021465.01.T01
Chr4 exon 58178331 58178590 58178331 ID=MsG0480021465.01.T01:exon:19528;Parent=MsG0480021465.01.T01
Chr4 exon 58179487 58179679 58179487 ID=MsG0480021465.01.T01:exon:19527;Parent=MsG0480021465.01.T01
Chr4 five_prime_UTR 58179580 58179679 58179580 ID=MsG0480021465.01.T01:five_prime_utr;Parent=MsG0480021465.01.T01
Chr4 CDS 58179487 58179579 58179487 ID=MsG0480021465.01.T01:cds;Parent=MsG0480021465.01.T01
Chr4 CDS 58178331 58178590 58178331 ID=MsG0480021465.01.T01:cds;Parent=MsG0480021465.01.T01
Chr4 CDS 58176170 58176278 58176170 ID=MsG0480021465.01.T01:cds;Parent=MsG0480021465.01.T01
Chr4 three_prime_UTR 58175911 58176169 58175911 ID=MsG0480021465.01.T01:three_prime_utr;Parent=MsG0480021465.01.T01
Gene Sequence

>MsG0480021465.01.T01

ATGCAGATCTTCGTCAAAACTTTGACCGGAAAGACTATCACTCTCGAGGTTGAGAGTAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCTCCTGAGCAGCAGAGGTTGATTTTCGCTGGTAAGCAACTGGAAGATGGTCGCACTCTTGCTGATTACAACATACAAAAGGAATCAACTCTTCACTTGGTCCTGAGGCTCAGGGGAGGAACCATGATTAAAGTGAAGACTTTAACTGGAAAAGAAATTGAAATTGACATTGAGCCAACTGATACAATTGATCGTATCAAGGAGCGTGTTGAAGAAAAAGAAGGAATTCCACCTGTGCAGCAGAGGCTCATATATGCTGGTAAGCAGCTTGCTGATGACAAAACAGCTAAAGAGTACAACATTGAGGGTGGTTCTGTGCTTCACTTGGTGCTTGCATTGAGGGGTGGTAATTAG

Protein sequence

>MsG0480021465.01.T01

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGN*