AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014703.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014703.01.T01 MTR_7g029510 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_7g099610 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_5g063620 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_4g061827 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_4g061920 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g462400 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g054380 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g462730 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g462510 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g070920 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g061440 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_3g462410 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_2g096100 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_8g038460 97.059 102 3 0 109 210 1 102 5.49e-65 199
MsG0380014703.01.T01 MTR_4g128150 84.167 120 14 2 119 234 11 129 1.18e-51 174
MsG0380014703.01.T01 MTR_3g462720 79.730 74 12 1 38 111 1 71 2.41e-32 115
MsG0380014703.01.T01 MTR_7g029520 84.000 50 8 0 135 184 1 50 1.21e-19 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014703.01.T01 AT5G59970 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT5G59690 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT5G59970 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT3G46320 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT3G45930 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT3G53730 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT2G28740 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT1G07660 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT1G07820 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT1G07820 97.059 102 3 0 109 210 1 102 5.75e-65 199
MsG0380014703.01.T01 AT1G07660 80.392 102 3 1 109 210 1 85 1.12e-47 154

Find 80 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCACTATGGACGAATTT+TGG 0.074860 3:+58687049 MsG0380014703.01.T01:CDS
GTCTTACCAGAATTTGAATT+TGG 0.175882 3:-58686667 None:intergenic
TTTGTCTCGTTATGTTAATT+TGG 0.176724 3:+58692685 MsG0380014703.01.T01:CDS
GCTTCAACCAATTCAATTCT+TGG 0.180865 3:-58687027 None:intergenic
AGTGGCTGTGGCTTTGTTTC+AGG 0.184012 3:+58693293 MsG0380014703.01.T01:intron
CAACGACATCCGTCATTGTT+TGG 0.236429 3:-58686921 None:intergenic
CTCGAACTGCGGGGAGATAT+TGG 0.278524 3:+58693079 MsG0380014703.01.T01:CDS
CTTGAGTTCGCCATAGTTGC+TGG 0.290409 3:-58686880 None:intergenic
TTTCAGGAAATGCAGATTCT+TGG 0.291941 3:+58693309 MsG0380014703.01.T01:CDS
AACGACATCCGTCATTGTTT+GGG 0.292205 3:-58686920 None:intergenic
ACCAATTCAATTCTTGGTCT+TGG 0.307336 3:-58687021 None:intergenic
TTGTCTCGTTATGTTAATTT+GGG 0.317026 3:+58692686 MsG0380014703.01.T01:CDS
CAAAATCCAAATTCAAATTC+TGG 0.326921 3:+58686661 MsG0380014703.01.T01:CDS
CTACCACCACATGTTGCTAT+TGG 0.348793 3:+58686979 MsG0380014703.01.T01:CDS
TCCAAGACCAAGAATTGAAT+TGG 0.372781 3:+58687020 MsG0380014703.01.T01:CDS
CTTGGAGTCATGGAAGAGTT+TGG 0.376764 3:-58687003 None:intergenic
TCATTTATGTTGCAACAAAC+TGG 0.384637 3:+58686835 MsG0380014703.01.T01:CDS
TACAAGAGCTCCAGCAACTA+TGG 0.400312 3:+58686870 MsG0380014703.01.T01:CDS
TACCACCACATGTTGCTATT+GGG 0.403191 3:+58686980 MsG0380014703.01.T01:CDS
AGGTGTCTTGAAGATCTTCT+TGG 0.405705 3:+58691791 MsG0380014703.01.T01:CDS
TTCATGGTTTGACAGATAGT+TGG 0.419706 3:+58693017 MsG0380014703.01.T01:intron
ATTGGTTGAAGCAATCACTA+TGG 0.428654 3:+58687038 MsG0380014703.01.T01:CDS
AGACAAGGAAGAACCCTCTA+TGG 0.431401 3:+58691900 MsG0380014703.01.T01:CDS
GGAAGAACCCTCTATGGTTT+CGG 0.438131 3:+58691906 MsG0380014703.01.T01:CDS
TTGGGCTGGATTGGATGATT+CGG 0.450992 3:+58687068 MsG0380014703.01.T01:CDS
ACATGTGGTGGTAGCGGCGG+TGG 0.454591 3:-58686970 None:intergenic
CTCAGTAAAGTAGTCTCGTC+TGG 0.471990 3:-58693339 None:intergenic
CTTGCCAATCGACGAATGGC+AGG 0.473855 3:-58691720 None:intergenic
ATCAACCTCCGAAACCATAG+AGG 0.481091 3:-58691914 None:intergenic
TTGATGTTTCTCAGTGGCTG+TGG 0.481701 3:+58693281 MsG0380014703.01.T01:intron
TGTTAATTTGGGAGATGTTG+CGG 0.481982 3:+58692697 MsG0380014703.01.T01:CDS
TACATTTGTACTCGAACTGC+GGG 0.482371 3:+58693069 MsG0380014703.01.T01:CDS
GGTAAGGGACTCGGAAAGGG+AGG 0.488695 3:+58691645 MsG0380014703.01.T01:CDS
AGGTCGTGGAAAGGGAGGTA+AGG 0.492819 3:+58691629 MsG0380014703.01.T01:intron
AATTCTTGGTCTTGGAGTCA+TGG 0.493161 3:-58687013 None:intergenic
GGAGGTAAGGGACTCGGAAA+GGG 0.499726 3:+58691642 MsG0380014703.01.T01:CDS
AGCGGCGGTGGTGGTAATGT+TGG 0.500567 3:-58686958 None:intergenic
AAAGCCTGCCATTCGTCGAT+TGG 0.502268 3:+58691716 MsG0380014703.01.T01:CDS
GAAGATCTTCAAGACACCTC+TGG 0.510902 3:-58691787 None:intergenic
TGTGGTGGTAGCGGCGGTGG+TGG 0.512723 3:-58686967 None:intergenic
GGGAGGTAAGGGACTCGGAA+AGG 0.518226 3:+58691641 MsG0380014703.01.T01:CDS
AGTTCTTCGTGATAACATCC+AGG 0.522451 3:+58691686 MsG0380014703.01.T01:CDS
GGAAAGGGAGGTAAGGGACT+CGG 0.535187 3:+58691636 MsG0380014703.01.T01:CDS
ATACATTTGTACTCGAACTG+CGG 0.543415 3:+58693068 MsG0380014703.01.T01:CDS
TTACATACACTGAGCACGCT+AGG 0.546510 3:+58691835 MsG0380014703.01.T01:CDS
AAAATGTCAGGTCGTGGAAA+GGG 0.548959 3:+58691621 MsG0380014703.01.T01:intron
ATAGCAACATGTGGTGGTAG+CGG 0.555362 3:-58686976 None:intergenic
GAGGAAGACCGTCACTGCCA+TGG 0.562767 3:+58691857 MsG0380014703.01.T01:CDS
GGTCGTGGAAAGGGAGGTAA+GGG 0.564245 3:+58691630 MsG0380014703.01.T01:intron
AGGGAGGTGCAAAGAGACAT+AGG 0.568952 3:+58691661 MsG0380014703.01.T01:CDS
AATGTATCAATGCATTCTGA+AGG 0.569071 3:-58693052 None:intergenic
GTCTATGCTTTGAAGAGACA+AGG 0.570048 3:+58691885 MsG0380014703.01.T01:CDS
GACAACATCCATGGCAGTGA+CGG 0.581812 3:-58691865 None:intergenic
GAAAATGTCAGGTCGTGGAA+AGG 0.584382 3:+58691620 MsG0380014703.01.T01:intron
TCTTCTTGCCAATCGACGAA+TGG 0.584939 3:-58691724 None:intergenic
GGCGGTGTTAAGAGAATCAG+TGG 0.595979 3:+58691747 MsG0380014703.01.T01:CDS
GTTGGTTGAAGCACTGTCGA+AGG 0.612124 3:-58687100 None:intergenic
CGTCGATTGGCAAGAAGAGG+CGG 0.616453 3:+58691729 MsG0380014703.01.T01:CDS
ATTCGTCGATTGGCAAGAAG+AGG 0.617367 3:+58691726 MsG0380014703.01.T01:CDS
TGGCAGGCTTTGTGATACCC+TGG 0.617511 3:-58691704 None:intergenic
ACGACATCCGTCATTGTTTG+GGG 0.618527 3:-58686919 None:intergenic
AACTGCGGGGAGATATTGGA+TGG 0.620986 3:+58693083 MsG0380014703.01.T01:CDS
GCAACATGTGGTGGTAGCGG+CGG 0.624896 3:-58686973 None:intergenic
GCAACAAACTGGTGCCTCTG+TGG 0.630045 3:+58686846 MsG0380014703.01.T01:CDS
AGAACCCTCTATGGTTTCGG+AGG 0.630900 3:+58691909 MsG0380014703.01.T01:CDS
CAAACAATGACGGATGTCGT+TGG 0.633433 3:+58686922 MsG0380014703.01.T01:CDS
CAAAGCATAGACAACATCCA+TGG 0.634439 3:-58691874 None:intergenic
GGCCCAATAGCAACATGTGG+TGG 0.638969 3:-58686982 None:intergenic
GTTCTTCGTGATAACATCCA+GGG 0.641996 3:+58691687 MsG0380014703.01.T01:CDS
TTAGAATCAAGCATGGAGCA+TGG 0.643015 3:+58686616 None:intergenic
ATGTCAGGTCGTGGAAAGGG+AGG 0.643397 3:+58691624 MsG0380014703.01.T01:intron
GAACATGGTGAGTGCATGTG+AGG 0.658093 3:+58692648 MsG0380014703.01.T01:intron
CATTGTGCCCCAAACAATGA+CGG 0.660072 3:+58686912 MsG0380014703.01.T01:CDS
TCAACCTCCGAAACCATAGA+GGG 0.666233 3:-58691913 None:intergenic
CATACACTGAGCACGCTAGG+AGG 0.680607 3:+58691838 MsG0380014703.01.T01:CDS
TTTGGCCCAATAGCAACATG+TGG 0.698123 3:-58686985 None:intergenic
TTGATCTATGAAGAAACCAG+AGG 0.704889 3:+58691771 MsG0380014703.01.T01:CDS
TAATTTGGGAGATGTTGCGG+AGG 0.710894 3:+58692700 MsG0380014703.01.T01:CDS
ACATTTGTACTCGAACTGCG+GGG 0.762366 3:+58693070 MsG0380014703.01.T01:CDS
TGGAGCTCTTGTATCCACAG+AGG 0.773217 3:-58686860 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTATATTATAATATAAG+AGG + Chr3:58689731-58689750 MsG0380014703.01.T01:intron 10.0%
!! ATGTATATTATAATATAAGA+GGG + Chr3:58689732-58689751 MsG0380014703.01.T01:intron 10.0%
!! ATTTAATATATTAAATGAGA+AGG + Chr3:58687388-58687407 MsG0380014703.01.T01:intron 10.0%
!! TAAAAACTTAATAAAGTAAT+AGG - Chr3:58689696-58689715 None:intergenic 10.0%
!! TTTAATATATTAAATGAGAA+GGG + Chr3:58687389-58687408 MsG0380014703.01.T01:intron 10.0%
!!! GATTTTTATATTTTTTTCTA+AGG + Chr3:58687299-58687318 MsG0380014703.01.T01:intron 10.0%
!!! TTAAAATAATGAAAGTATTT+TGG + Chr3:58686805-58686824 MsG0380014703.01.T01:intron 10.0%
!! AAGAAAAAAAAATCAAGTTT+AGG - Chr3:58689951-58689970 None:intergenic 15.0%
!! ACATACATCATAATTTATAT+TGG + Chr3:58687938-58687957 MsG0380014703.01.T01:intron 15.0%
!! AGAAAAAAAAATCAAGTTTA+GGG - Chr3:58689950-58689969 None:intergenic 15.0%
!! ATAAACTTTAAACATAAACA+AGG - Chr3:58687345-58687364 None:intergenic 15.0%
!! CATTGTTCATAAAAAATAAA+AGG + Chr3:58688486-58688505 MsG0380014703.01.T01:intron 15.0%
!! GATTATAAAATAAATGACTA+AGG + Chr3:58687193-58687212 MsG0380014703.01.T01:intron 15.0%
!! GATTTATGAAATAATCTTTA+GGG + Chr3:58691240-58691259 MsG0380014703.01.T01:intron 15.0%
!! GTAAACTACATTTATATTAT+AGG + Chr3:58692328-58692347 MsG0380014703.01.T01:intron 15.0%
!! TATAAAAGAAATATGAAAGT+TGG - Chr3:58687121-58687140 None:intergenic 15.0%
!! TTAAAATTTCGATACATTAA+GGG - Chr3:58688942-58688961 None:intergenic 15.0%
!! TTGAATATAATCATATTTGT+AGG + Chr3:58691070-58691089 MsG0380014703.01.T01:intron 15.0%
!!! AACGAAATATTTTAATATCA+AGG - Chr3:58689003-58689022 None:intergenic 15.0%
!!! AATTTTCCATTATTAAAAAG+AGG - Chr3:58688233-58688252 None:intergenic 15.0%
!!! ACAATAACTCTTTTTATATA+GGG - Chr3:58689107-58689126 None:intergenic 15.0%
!!! ACATATAATGCTTTTATTAT+TGG + Chr3:58686778-58686797 MsG0380014703.01.T01:intron 15.0%
!!! ATATAAATTTTCAAGTTCAT+GGG + Chr3:58690725-58690744 MsG0380014703.01.T01:intron 15.0%
!!! ATCAATTTTTTGGTTAATAT+AGG + Chr3:58688757-58688776 MsG0380014703.01.T01:intron 15.0%
!!! ATTGAAGTTTTATTAATTTC+AGG + Chr3:58690835-58690854 MsG0380014703.01.T01:intron 15.0%
!!! ATTTTCCATTATTAAAAAGA+GGG - Chr3:58688232-58688251 None:intergenic 15.0%
!!! CTTTTATTTTTTATGAACAA+TGG - Chr3:58688488-58688507 None:intergenic 15.0%
!!! GATTTGTATATTTTGTAAAA+TGG + Chr3:58692230-58692249 MsG0380014703.01.T01:intron 15.0%
!!! TACATATCGATTATATATTA+TGG - Chr3:58688665-58688684 None:intergenic 15.0%
!!! TATATAAATTTTCAAGTTCA+TGG + Chr3:58690724-58690743 MsG0380014703.01.T01:intron 15.0%
!!! TATTAAGTTTTTACTTTCAA+GGG + Chr3:58689703-58689722 MsG0380014703.01.T01:intron 15.0%
!!! TTATTAAGTTTTTACTTTCA+AGG + Chr3:58689702-58689721 MsG0380014703.01.T01:intron 15.0%
!!! TTGAAGTTTTATTAATTTCA+GGG + Chr3:58690836-58690855 MsG0380014703.01.T01:intron 15.0%
!!! TTTAAAATTTCGATACATTA+AGG - Chr3:58688943-58688962 None:intergenic 15.0%
!!! TTTCTTTCTTTTTTTAATGT+CGG - Chr3:58688368-58688387 None:intergenic 15.0%
!! AAAAAAAAATCAAGTTTAGG+GGG - Chr3:58689948-58689967 None:intergenic 20.0%
!! AACAGAAAATTTGAGAAATT+AGG - Chr3:58691600-58691619 None:intergenic 20.0%
!! AATAATGTAACCAAAAAAAG+AGG + Chr3:58691268-58691287 MsG0380014703.01.T01:intron 20.0%
!! ACAATAAGTAAGTACATATA+AGG - Chr3:58689075-58689094 None:intergenic 20.0%
!! ACAGAAAATTTGAGAAATTA+GGG - Chr3:58691599-58691618 None:intergenic 20.0%
!! ACTACATTTATATTATAGGA+AGG + Chr3:58692332-58692351 MsG0380014703.01.T01:intron 20.0%
!! ACTGGTATTATTTATGTTAT+TGG - Chr3:58688700-58688719 None:intergenic 20.0%
!! ATAATAAGTAAGTCTATTGA+AGG - Chr3:58689043-58689062 None:intergenic 20.0%
!! ATAATGTAACCAAAAAAAGA+GGG + Chr3:58691269-58691288 MsG0380014703.01.T01:intron 20.0%
!! ATCTTTAATTAAAGCTTCAA+TGG + Chr3:58687611-58687630 MsG0380014703.01.T01:intron 20.0%
!! CGATTTATGAAATAATCTTT+AGG + Chr3:58691239-58691258 MsG0380014703.01.T01:intron 20.0%
!! GAAAAAAAAATCAAGTTTAG+GGG - Chr3:58689949-58689968 None:intergenic 20.0%
!! GCACATAAATAATATATGAT+TGG - Chr3:58690501-58690520 None:intergenic 20.0%
!! TAGTTAATCAAAGTGTAAAA+TGG + Chr3:58692524-58692543 MsG0380014703.01.T01:intron 20.0%
!! TTGGATTAAAGGAAATAATA+TGG + Chr3:58692834-58692853 MsG0380014703.01.T01:intron 20.0%
!!! AATTGTTTTGATGAACTTAA+TGG - Chr3:58689509-58689528 None:intergenic 20.0%
!!! AGTCAAGAAAATTATGATTT+TGG - Chr3:58687844-58687863 None:intergenic 20.0%
!!! CACAATAACTCTTTTTATAT+AGG - Chr3:58689108-58689127 None:intergenic 20.0%
!!! CATCATAATTTATATTGGTT+TGG + Chr3:58687943-58687962 MsG0380014703.01.T01:intron 20.0%
!!! CTTTTTATGTTTCAATTATG+AGG + Chr3:58688869-58688888 MsG0380014703.01.T01:intron 20.0%
!!! GTCAAGAAAATTATGATTTT+GGG - Chr3:58687843-58687862 None:intergenic 20.0%
!!! TATAAATTTTCAAGTTCATG+GGG + Chr3:58690726-58690745 MsG0380014703.01.T01:intron 20.0%
!!! TCAACAATATATTTTATGAC+TGG - Chr3:58688718-58688737 None:intergenic 20.0%
!!! TGAAGTTTTATTAATTTCAG+GGG + Chr3:58690837-58690856 MsG0380014703.01.T01:intron 20.0%
!!! TTAGAATTTTGATACATTGA+AGG + Chr3:58689194-58689213 MsG0380014703.01.T01:intron 20.0%
!!! TTCTTTCTTTTTTTAATGTC+GGG - Chr3:58688367-58688386 None:intergenic 20.0%
!!! TTTATATTTTTTTCTAAGGG+TGG + Chr3:58687303-58687322 MsG0380014703.01.T01:intron 20.0%
!!! TTTCTTGTTATAAACAGAAT+AGG + Chr3:58692875-58692894 MsG0380014703.01.T01:intron 20.0%
!!! TTTTCAAGAACTTTTGTTTT+TGG + Chr3:58692181-58692200 MsG0380014703.01.T01:intron 20.0%
!!! TTTTGTGAAATTTAAGAGAA+TGG + Chr3:58687513-58687532 MsG0380014703.01.T01:intron 20.0%
! AAACTAAAATAAGCATTCAG+TGG + Chr3:58692553-58692572 MsG0380014703.01.T01:intron 25.0%
! AAATAAAAGTGAGTTAGTTG+TGG - Chr3:58689590-58689609 None:intergenic 25.0%
! AACAGCATAAAAGTTAATAC+AGG - Chr3:58692623-58692642 None:intergenic 25.0%
! AACTAAAATAAGCATTCAGT+GGG + Chr3:58692554-58692573 MsG0380014703.01.T01:intron 25.0%
! AAGAGTTATTGTGAGTATTA+AGG + Chr3:58689115-58689134 MsG0380014703.01.T01:intron 25.0%
! AGACTGTAATAACAATAAGT+TGG - Chr3:58692445-58692464 None:intergenic 25.0%
! AGAGTTATTGTGAGTATTAA+GGG + Chr3:58689116-58689135 MsG0380014703.01.T01:intron 25.0%
! ATTAACGTTGTACAATTTCA+GGG - Chr3:58689831-58689850 None:intergenic 25.0%
! ATTGCATTATCACTTAATTG+TGG + Chr3:58689984-58690003 MsG0380014703.01.T01:intron 25.0%
! CAAAATCCAAATTCAAATTC+TGG + Chr3:58686661-58686680 MsG0380014703.01.T01:CDS 25.0%
! CACTAAATCAATTAAGTTAC+TGG - Chr3:58692309-58692328 None:intergenic 25.0%
! CGTCGATAAATATATTTGAA+CGG - Chr3:58691390-58691409 None:intergenic 25.0%
! GAGTATTTATGTAAGGTAAT+TGG - Chr3:58691534-58691553 None:intergenic 25.0%
! GATTAAAGACAAGTAGTTAT+CGG - Chr3:58689448-58689467 None:intergenic 25.0%
! TAAGAAATTGTTTGATTCCA+TGG + Chr3:58693206-58693225 MsG0380014703.01.T01:intron 25.0%
! TACCAAGATGTCAAAATATA+TGG - Chr3:58690465-58690484 None:intergenic 25.0%
! TACTCTCACAAATAATTGAA+GGG - Chr3:58689268-58689287 None:intergenic 25.0%
! TATCATTAGACTCTAATACA+TGG + Chr3:58690591-58690610 MsG0380014703.01.T01:intron 25.0%
! TATGAATGCTAATTTGATTG+TGG + Chr3:58692937-58692956 MsG0380014703.01.T01:intron 25.0%
! TGACTAACAGAAAAATTTGA+CGG + Chr3:58690803-58690822 MsG0380014703.01.T01:intron 25.0%
! TGACTAACAGAAAAATTTGA+CGG - Chr3:58690822-58690803 None:intergenic 25.0%
! TTACTCTCACAAATAATTGA+AGG - Chr3:58689269-58689288 None:intergenic 25.0%
! TTACTTCTCTCACTTTATAA+AGG - Chr3:58690330-58690349 None:intergenic 25.0%
! TTGTCTCGTTATGTTAATTT+GGG + Chr3:58692686-58692705 MsG0380014703.01.T01:CDS 25.0%
! TTTACACAAGAAAACTAACA+AGG + Chr3:58687698-58687717 MsG0380014703.01.T01:intron 25.0%
! TTTGTCTCGTTATGTTAATT+TGG + Chr3:58692685-58692704 MsG0380014703.01.T01:CDS 25.0%
!! AATATGCACTCTATCAATTT+TGG - Chr3:58690990-58691009 None:intergenic 25.0%
!! AATTTTCTGTTGAAAATGTC+AGG + Chr3:58691609-58691628 MsG0380014703.01.T01:intron 25.0%
!! AATTTTCTTGACTACTATGA+TGG + Chr3:58687851-58687870 MsG0380014703.01.T01:intron 25.0%
!! ACGAAACATACAATTTTAGA+GGG + Chr3:58690868-58690887 MsG0380014703.01.T01:intron 25.0%
!! ACTTGATTCAAGTACTTTTA+TGG + Chr3:58688087-58688106 MsG0380014703.01.T01:intron 25.0%
!! AGTTATCGGTTATGAAAAAA+TGG - Chr3:58689434-58689453 None:intergenic 25.0%
!! ATAAAGGAAGTGGAAATTTT+TGG + Chr3:58690413-58690432 MsG0380014703.01.T01:intron 25.0%
!! ATACTCCCTCTTTTTAATAA+TGG + Chr3:58688224-58688243 MsG0380014703.01.T01:intron 25.0%
!! TAAACATAAACAAGGTGTTT+AGG - Chr3:58687337-58687356 None:intergenic 25.0%
!! TGAAAAGAGTTTCAAACTTT+TGG + Chr3:58687465-58687484 MsG0380014703.01.T01:intron 25.0%
!! TTTGACATCTTGGTAATTAT+TGG + Chr3:58690470-58690489 MsG0380014703.01.T01:intron 25.0%
!!! AAGTTTTATTAATTTCAGGG+GGG + Chr3:58690839-58690858 MsG0380014703.01.T01:intron 25.0%
!!! ATGAAATGAAGTACTTTTTC+TGG + Chr3:58692108-58692127 MsG0380014703.01.T01:intron 25.0%
!!! ATTAACTTTTATGCTGTTTG+TGG + Chr3:58692625-58692644 MsG0380014703.01.T01:intron 25.0%
!!! ATTTTGATCATTGTGAAAGA+AGG - Chr3:58686647-58686666 None:intergenic 25.0%
!!! CAATCTTTGAAATCATTGTA+AGG + Chr3:58688261-58688280 MsG0380014703.01.T01:intron 25.0%
!!! GAAGTTTTATTAATTTCAGG+GGG + Chr3:58690838-58690857 MsG0380014703.01.T01:intron 25.0%
!!! GTATATTAGCTAAGTTTTGA+TGG - Chr3:58690657-58690676 None:intergenic 25.0%
!!! TATTAGTCTTAGTCGAATTA+TGG - Chr3:58688181-58688200 None:intergenic 25.0%
!!! TATTTGTATCCCTCTTTTTT+TGG - Chr3:58691281-58691300 None:intergenic 25.0%
!!! TCTTTCTTTTTTTAATGTCG+GGG - Chr3:58688366-58688385 None:intergenic 25.0%
!!! TGATAATGCAATCACTTTTA+AGG - Chr3:58689976-58689995 None:intergenic 25.0%
!!! TTAACTTTTATGCTGTTTGT+GGG + Chr3:58692626-58692645 MsG0380014703.01.T01:intron 25.0%
AATCCAGCAAGAAAATAGAA+GGG + Chr3:58689464-58689483 MsG0380014703.01.T01:intron 30.0%
AATGTATCAATGCATTCTGA+AGG - Chr3:58693055-58693074 None:intergenic 30.0%
ACGAAACTTACAATTTCAAG+GGG - Chr3:58689799-58689818 None:intergenic 30.0%
ACTCTCACAAATAATTGAAG+GGG - Chr3:58689267-58689286 None:intergenic 30.0%
AGGTATAACCTTATTGTGAT+TGG + Chr3:58689347-58689366 MsG0380014703.01.T01:intron 30.0%
ATATGGTCGTTAATCGTATA+GGG - Chr3:58689316-58689335 None:intergenic 30.0%
ATCATTCCTTTGAATCCTAA+CGG + Chr3:58690275-58690294 MsG0380014703.01.T01:intron 30.0%
ATGTGAAGACATTATCTCAT+AGG - Chr3:58688206-58688225 None:intergenic 30.0%
CACTTTATAAAGGATCTTGA+AGG - Chr3:58690320-58690339 None:intergenic 30.0%
CGTATTGAGAGAAAGAATAA+TGG - Chr3:58691414-58691433 None:intergenic 30.0%
GAAAAAACAACATCTGATGT+TGG - Chr3:58690150-58690169 None:intergenic 30.0%
GACGAAACTTACAATTTCAA+GGG - Chr3:58689800-58689819 None:intergenic 30.0%
GACGATATACAACCATATAT+TGG + Chr3:58690026-58690045 MsG0380014703.01.T01:intron 30.0%
GATTAACGTTGTACAATTTC+AGG - Chr3:58689832-58689851 None:intergenic 30.0%
GTCTTACCAGAATTTGAATT+TGG - Chr3:58686670-58686689 None:intergenic 30.0%
TAACAGAAAAATTTGACGGA+GGG + Chr3:58690807-58690826 MsG0380014703.01.T01:intron 30.0%
TAACAGAAAAATTTGACGGA+GGG - Chr3:58690826-58690807 None:intergenic 30.0%
TAAGGGATTATTTAAGCGTT+GGG + Chr3:58689133-58689152 MsG0380014703.01.T01:intron 30.0%
TAATCCAGCAAGAAAATAGA+AGG + Chr3:58689463-58689482 MsG0380014703.01.T01:intron 30.0%
TATAATATAAGAGGGAAGTG+AGG + Chr3:58689740-58689759 MsG0380014703.01.T01:intron 30.0%
TATATGGTCGTTAATCGTAT+AGG - Chr3:58689317-58689336 None:intergenic 30.0%
TCATTTATGTTGCAACAAAC+TGG + Chr3:58686835-58686854 MsG0380014703.01.T01:CDS 30.0%
TGACGAAACTTACAATTTCA+AGG - Chr3:58689801-58689820 None:intergenic 30.0%
TGGATCTGAGTATTTATGTA+AGG - Chr3:58691541-58691560 None:intergenic 30.0%
TGTTGAAGAAGTTATGAGTA+GGG + Chr3:58688732-58688751 MsG0380014703.01.T01:intron 30.0%
TTAACGTTGTACAATTTCAG+GGG - Chr3:58689830-58689849 None:intergenic 30.0%
TTAAGGGATTATTTAAGCGT+TGG + Chr3:58689132-58689151 MsG0380014703.01.T01:intron 30.0%
TTGTTGAAGAAGTTATGAGT+AGG + Chr3:58688731-58688750 MsG0380014703.01.T01:intron 30.0%
! AATCACTATGGACGAATTTT+GGG + Chr3:58687050-58687069 MsG0380014703.01.T01:CDS 30.0%
! ACATTCTAAGAAGTTATGCA+TGG + Chr3:58688039-58688058 MsG0380014703.01.T01:intron 30.0%
! AGTTGGAACTCAATGATTTT+TGG + Chr3:58693153-58693172 MsG0380014703.01.T01:intron 30.0%
! ATAAGTTGGAAACAAACACA+AGG - Chr3:58692431-58692450 None:intergenic 30.0%
! CTAGATTTTACGCATAATGT+AGG + Chr3:58687773-58687792 MsG0380014703.01.T01:intron 30.0%
! GACGAAACATACAATTTTAG+AGG + Chr3:58690867-58690886 MsG0380014703.01.T01:intron 30.0%
! GATGGTCATAAACTTTTCAT+TGG + Chr3:58693101-58693120 MsG0380014703.01.T01:intron 30.0%
! GTTGGAACTCAATGATTTTT+GGG + Chr3:58693154-58693173 MsG0380014703.01.T01:intron 30.0%
! TTTACACACTTTGAGAACTT+AGG + Chr3:58687878-58687897 MsG0380014703.01.T01:intron 30.0%
!! AGGCTTTTTGATTGGATTAA+AGG + Chr3:58692823-58692842 MsG0380014703.01.T01:intron 30.0%
!! CGAAACATACAATTTTAGAG+GGG + Chr3:58690869-58690888 MsG0380014703.01.T01:intron 30.0%
!! GTTTTATTATTGCCATTCCT+TGG - Chr3:58688159-58688178 None:intergenic 30.0%
!!! AGCCATATATTTTGACATCT+TGG + Chr3:58690460-58690479 MsG0380014703.01.T01:intron 30.0%
!!! ATATTTTTTTCTAAGGGTGG+AGG + Chr3:58687306-58687325 MsG0380014703.01.T01:intron 30.0%
!!! CTTTCTTTTTTTAATGTCGG+GGG - Chr3:58688365-58688384 None:intergenic 30.0%
!!! GACTATTTTGACTAACAAAG+TGG + Chr3:58689156-58689175 MsG0380014703.01.T01:intron 30.0%
!!! GAGTTTTGAACATTAGTGTA+GGG - Chr3:58690087-58690106 None:intergenic 30.0%
!!! TGAGTTTTGAACATTAGTGT+AGG - Chr3:58690088-58690107 None:intergenic 30.0%
!!! TGATTATGCAGTCACTTTTA+AGG + Chr3:58690689-58690708 MsG0380014703.01.T01:intron 30.0%
!!! TGTTGTTTTCCTTTTATCCT+TGG - Chr3:58688637-58688656 None:intergenic 30.0%
!!! TGTTTTGATGAACTTAATGG+AGG - Chr3:58689506-58689525 None:intergenic 30.0%
AAACGCAAAAACTAGCACAA+AGG + Chr3:58691321-58691340 MsG0380014703.01.T01:intron 35.0%
AAAGGATCTTGAAGGAATCA+TGG - Chr3:58690312-58690331 None:intergenic 35.0%
AACAGAAAAATTTGACGGAG+GGG + Chr3:58690808-58690827 MsG0380014703.01.T01:intron 35.0%
AACAGAAAAATTTGACGGAG+GGG - Chr3:58690827-58690808 None:intergenic 35.0%
AACATCATCGAAGCTTTCTA+AGG - Chr3:58692016-58692035 None:intergenic 35.0%
AATCATGGAGTTAGAAGCAA+TGG - Chr3:58692764-58692783 None:intergenic 35.0%
ACAACCATATATTGGCAGTA+TGG + Chr3:58690034-58690053 MsG0380014703.01.T01:intron 35.0%
ACATAAGTGCAAAACTTTCG+GGG + Chr3:58690757-58690776 MsG0380014703.01.T01:intron 35.0%
ACATTGCAACCTTAGTCATA+AGG + Chr3:58688585-58688604 MsG0380014703.01.T01:intron 35.0%
ACCAATTCAATTCTTGGTCT+TGG - Chr3:58687024-58687043 None:intergenic 35.0%
ACTAACAAGGAACCAATCTA+TGG + Chr3:58687711-58687730 MsG0380014703.01.T01:intron 35.0%
AGAAAGCTTCGATGATGTTT+AGG + Chr3:58692017-58692036 MsG0380014703.01.T01:intron 35.0%
AGGACAAATGTGTGTATGAA+TGG + Chr3:58692720-58692739 MsG0380014703.01.T01:intron 35.0%
AGTTGAAACGACAATATCTG+TGG + Chr3:58689659-58689678 MsG0380014703.01.T01:intron 35.0%
ATAACCTTATTGTGATTGGC+AGG + Chr3:58689351-58689370 MsG0380014703.01.T01:intron 35.0%
ATACATTTGTACTCGAACTG+CGG + Chr3:58693068-58693087 MsG0380014703.01.T01:CDS 35.0%
ATACCTGCTCTACGTATATA+TGG - Chr3:58689333-58689352 None:intergenic 35.0%
ATCACTTTAGTCCTTGAATG+AGG + Chr3:58688897-58688916 MsG0380014703.01.T01:intron 35.0%
ATTAGAGATCAAAAGGATGG+TGG + Chr3:58690193-58690212 MsG0380014703.01.T01:intron 35.0%
ATTCTTTCTCTCAATACGCA+CGG + Chr3:58691416-58691435 MsG0380014703.01.T01:intron 35.0%
ATTGGTTGAAGCAATCACTA+TGG + Chr3:58687038-58687057 MsG0380014703.01.T01:CDS 35.0%
CAAACAATTTCTTAGCATCC+TGG - Chr3:58693200-58693219 None:intergenic 35.0%
CACATAAGTGCAAAACTTTC+GGG + Chr3:58690756-58690775 MsG0380014703.01.T01:intron 35.0%
CACATTCAAACTCCATAGAT+TGG - Chr3:58687726-58687745 None:intergenic 35.0%
CACTCACAATATAAAGGAAG+TGG + Chr3:58690403-58690422 MsG0380014703.01.T01:intron 35.0%
CACTTAATCTAACCAAGGAA+TGG + Chr3:58688144-58688163 MsG0380014703.01.T01:intron 35.0%
CACTTCCTTTATATTGTGAG+TGG - Chr3:58690405-58690424 None:intergenic 35.0%
CAGACGCATAAGAATGAAAT+CGG + Chr3:58691363-58691382 MsG0380014703.01.T01:intron 35.0%
CATTCCTTGGTTAGATTAAG+TGG - Chr3:58688146-58688165 None:intergenic 35.0%
CGAAACTTACAATTTCAAGG+GGG - Chr3:58689798-58689817 None:intergenic 35.0%
CTAACAGAAAAATTTGACGG+AGG + Chr3:58690806-58690825 MsG0380014703.01.T01:intron 35.0%
CTAACAGAAAAATTTGACGG+AGG - Chr3:58690825-58690806 None:intergenic 35.0%
GAAAGCTTCGATGATGTTTA+GGG + Chr3:58692018-58692037 MsG0380014703.01.T01:intron 35.0%
GAATGCTAATTTGATTGTGG+TGG + Chr3:58692940-58692959 MsG0380014703.01.T01:intron 35.0%
GACTACTTTCTACACATTCA+GGG + Chr3:58689225-58689244 MsG0380014703.01.T01:intron 35.0%
GCACATAAGTGCAAAACTTT+CGG + Chr3:58690755-58690774 MsG0380014703.01.T01:intron 35.0%
GCATATTCGATCAATGACTT+TGG + Chr3:58691003-58691022 MsG0380014703.01.T01:intron 35.0%
GCTTCAACCAATTCAATTCT+TGG - Chr3:58687030-58687049 None:intergenic 35.0%
GTTGAAGAAGTTATGAGTAG+GGG + Chr3:58688733-58688752 MsG0380014703.01.T01:intron 35.0%
TAACGTTGTACAATTTCAGG+GGG - Chr3:58689829-58689848 None:intergenic 35.0%
TAGACCACTTAATCTAACCA+AGG + Chr3:58688139-58688158 MsG0380014703.01.T01:intron 35.0%
TCAACATTGATGTTTCTCAG+TGG + Chr3:58693275-58693294 MsG0380014703.01.T01:intron 35.0%
TCATTCCTTTGAATCCTAAC+GGG + Chr3:58690276-58690295 MsG0380014703.01.T01:intron 35.0%
TCCAAGACCAAGAATTGAAT+TGG + Chr3:58687020-58687039 MsG0380014703.01.T01:CDS 35.0%
TCTTCCAAATAGCACAATCA+TGG - Chr3:58692779-58692798 None:intergenic 35.0%
TGAAAGTGAGATAAGTGTGT+TGG + Chr3:58690370-58690389 MsG0380014703.01.T01:intron 35.0%
TGACTACTTTCTACACATTC+AGG + Chr3:58689224-58689243 MsG0380014703.01.T01:intron 35.0%
TGAGTGAGAAAAGATGAAAG+TGG - Chr3:58691561-58691580 None:intergenic 35.0%
TGATGAACTTAATGGAGGTT+AGG - Chr3:58689501-58689520 None:intergenic 35.0%
TGCATACTACCAAGGATAAA+AGG + Chr3:58688625-58688644 MsG0380014703.01.T01:intron 35.0%
TGGAACAAATTGACAGCATT+TGG + Chr3:58690057-58690076 MsG0380014703.01.T01:intron 35.0%
TTCATGGTTTGACAGATAGT+TGG + Chr3:58693017-58693036 MsG0380014703.01.T01:intron 35.0%
TTGAGAAGGATGTTGTATCT+TGG + Chr3:58693229-58693248 MsG0380014703.01.T01:intron 35.0%
TTGATCTATGAAGAAACCAG+AGG + Chr3:58691771-58691790 MsG0380014703.01.T01:CDS 35.0%
TTTACACGACCTTATGACTA+AGG - Chr3:58688597-58688616 None:intergenic 35.0%
TTTCAGGAAATGCAGATTCT+TGG + Chr3:58693309-58693328 MsG0380014703.01.T01:CDS 35.0%
! AACACAAGGTTTTCAACACA+TGG - Chr3:58692417-58692436 None:intergenic 35.0%
! AACTCCATGATTGTGCTATT+TGG + Chr3:58692772-58692791 MsG0380014703.01.T01:intron 35.0%
! AAGGGATTATTTAAGCGTTG+GGG + Chr3:58689134-58689153 MsG0380014703.01.T01:intron 35.0%
! AATCCCTTCTATTTTCTTGC+TGG - Chr3:58689470-58689489 None:intergenic 35.0%
! ACCATCCTTTTGATCTCTAA+TGG - Chr3:58690194-58690213 None:intergenic 35.0%
! AGTTTTTGCGTTTATGAGAG+AGG - Chr3:58691314-58691333 None:intergenic 35.0%
! CAATCACTATGGACGAATTT+TGG + Chr3:58687049-58687068 MsG0380014703.01.T01:CDS 35.0%
! CAGATATTGTCGTTTCAACT+AGG - Chr3:58689659-58689678 None:intergenic 35.0%
! CATCCTTTTGATCTCTAATG+GGG - Chr3:58690192-58690211 None:intergenic 35.0%
! CCATCCTTTTGATCTCTAAT+GGG - Chr3:58690193-58690212 None:intergenic 35.0%
! TGTTAATTTGGGAGATGTTG+CGG + Chr3:58692697-58692716 MsG0380014703.01.T01:CDS 35.0%
!! AAGGAAGTGGAAATTTTTGG+TGG + Chr3:58690416-58690435 MsG0380014703.01.T01:intron 35.0%
!! ACTCTATCAATTTTGGTCAC+AGG - Chr3:58690983-58691002 None:intergenic 35.0%
!! CAATTTTGGTCACAGGATTT+TGG - Chr3:58690976-58690995 None:intergenic 35.0%
!! GTTGGATTTCAAGTTATCGA+CGG - Chr3:58691456-58691475 None:intergenic 35.0%
!!! AGGAAGTGGAAATTTTTGGT+GGG + Chr3:58690417-58690436 MsG0380014703.01.T01:intron 35.0%
!!! ATTTTTGGGTACTTGATGTG+TGG + Chr3:58693168-58693187 MsG0380014703.01.T01:intron 35.0%
!!! GAGTAGGGGTATCAATTTTT+TGG + Chr3:58688747-58688766 MsG0380014703.01.T01:intron 35.0%
!!! TTTCATTGGTAGTGTCCTTT+TGG + Chr3:58693115-58693134 MsG0380014703.01.T01:intron 35.0%
AAAATGTCAGGTCGTGGAAA+GGG + Chr3:58691621-58691640 MsG0380014703.01.T01:intron 40.0%
AAACTATTGTGTCACCTGTG+AGG - Chr3:58687979-58687998 None:intergenic 40.0%
AACATGTCATCAGAGCTGAA+TGG - Chr3:58687163-58687182 None:intergenic 40.0%
AACGACATCCGTCATTGTTT+GGG - Chr3:58686923-58686942 None:intergenic 40.0%
AACGTTGTACAATTTCAGGG+GGG - Chr3:58689828-58689847 None:intergenic 40.0%
AAGTGAGATAAGTGTGTTGG+TGG + Chr3:58690373-58690392 MsG0380014703.01.T01:intron 40.0%
ACAGAAAAATTTGACGGAGG+GGG + Chr3:58690809-58690828 MsG0380014703.01.T01:intron 40.0%
ACAGAAAAATTTGACGGAGG+GGG - Chr3:58690828-58690809 None:intergenic 40.0%
ACCATATATTGGCAGTATGG+TGG + Chr3:58690037-58690056 MsG0380014703.01.T01:intron 40.0%
ACGTAAGTGCAAAACTTCGA+GGG - Chr3:58689917-58689936 None:intergenic 40.0%
AGAGTAAGATCCCTATACGT+AGG + Chr3:58689282-58689301 MsG0380014703.01.T01:intron 40.0%
AGGTGTCTTGAAGATCTTCT+TGG + Chr3:58691791-58691810 MsG0380014703.01.T01:CDS 40.0%
AGTAGTGTTGCATACTACCA+AGG + Chr3:58688617-58688636 MsG0380014703.01.T01:intron 40.0%
AGTTCTTCGTGATAACATCC+AGG + Chr3:58691686-58691705 MsG0380014703.01.T01:CDS 40.0%
ATGTGTGTATGAATGGATGC+CGG + Chr3:58692727-58692746 MsG0380014703.01.T01:intron 40.0%
ATTCCTTTGAATCCTAACGG+GGG + Chr3:58690278-58690297 MsG0380014703.01.T01:intron 40.0%
CAAAACTCACACACACACAA+AGG - Chr3:58688296-58688315 None:intergenic 40.0%
CAAAGCATAGACAACATCCA+TGG - Chr3:58691877-58691896 None:intergenic 40.0%
CATAAGTGCAAAACTTTCGG+GGG + Chr3:58690758-58690777 MsG0380014703.01.T01:intron 40.0%
CATCGTCAACATTGTAGATC+CGG + Chr3:58691026-58691045 MsG0380014703.01.T01:intron 40.0%
CATTCAGTGGGAAAATGAGA+TGG + Chr3:58692566-58692585 MsG0380014703.01.T01:intron 40.0%
CATTCCTTTGAATCCTAACG+GGG + Chr3:58690277-58690296 MsG0380014703.01.T01:intron 40.0%
CCATAAAGCACAAAGATCAG+AGG - Chr3:58692475-58692494 None:intergenic 40.0%
CCCATTAGAGATCAAAAGGA+TGG + Chr3:58690190-58690209 MsG0380014703.01.T01:intron 40.0%
CCTCTGATCTTTGTGCTTTA+TGG + Chr3:58692472-58692491 MsG0380014703.01.T01:intron 40.0%
CTTGAAAACTCTGTACAAGC+AGG - Chr3:58692169-58692188 None:intergenic 40.0%
GAATTGGGCATAAAACCTTG+CGG - Chr3:58692389-58692408 None:intergenic 40.0%
GACTAACAAAGTGGACAATC+AGG + Chr3:58689165-58689184 MsG0380014703.01.T01:intron 40.0%
GACTATTCGTTCCTCATTCA+AGG - Chr3:58688911-58688930 None:intergenic 40.0%
GATCCCTATACGTAGGTATA+CGG + Chr3:58689289-58689308 MsG0380014703.01.T01:intron 40.0%
GCAAAAACTAGCACAAAGGA+AGG + Chr3:58691325-58691344 MsG0380014703.01.T01:intron 40.0%
GTGCACCACTCACAATATAA+AGG + Chr3:58690397-58690416 MsG0380014703.01.T01:intron 40.0%
GTTCTTCGTGATAACATCCA+GGG + Chr3:58691687-58691706 MsG0380014703.01.T01:CDS 40.0%
GTTTGATTCCATGGTTGAGA+AGG + Chr3:58693215-58693234 MsG0380014703.01.T01:intron 40.0%
TAAACAGAATAGGATGTGCG+AGG + Chr3:58692885-58692904 MsG0380014703.01.T01:intron 40.0%
TACAACATCCTTCTCAACCA+TGG - Chr3:58693226-58693245 None:intergenic 40.0%
TACATTTGTACTCGAACTGC+GGG + Chr3:58693069-58693088 MsG0380014703.01.T01:CDS 40.0%
TCACCCCATTAGAGATCAAA+AGG + Chr3:58690186-58690205 MsG0380014703.01.T01:intron 40.0%
TCAGAAAACCCTTCGAACAT+TGG + Chr3:58688326-58688345 MsG0380014703.01.T01:intron 40.0%
TCCAAGAAACCAGATCCAAA+AGG - Chr3:58693133-58693152 None:intergenic 40.0%
TCCACCATACTGCCAATATA+TGG - Chr3:58690041-58690060 None:intergenic 40.0%
TGAAGGGGTAATAGTCACTT+TGG - Chr3:58689252-58689271 None:intergenic 40.0%
TGGAATGACCAATGTTCGAA+GGG - Chr3:58688337-58688356 None:intergenic 40.0%
TTCATTCTTATGCGTCTGTG+CGG - Chr3:58691361-58691380 None:intergenic 40.0%
! AGTTTTCCATCTGACAAGTG+TGG + Chr3:58690543-58690562 MsG0380014703.01.T01:intron 40.0%
! ATGCCTTCTGAAAGTCTAGA+GGG + Chr3:58687439-58687458 MsG0380014703.01.T01:intron 40.0%
! TACCACCACATGTTGCTATT+GGG + Chr3:58686980-58686999 MsG0380014703.01.T01:CDS 40.0%
! TATGCCTTCTGAAAGTCTAG+AGG + Chr3:58687438-58687457 MsG0380014703.01.T01:intron 40.0%
! TTATGCTGTTTGTGGGAACA+TGG + Chr3:58692633-58692652 MsG0380014703.01.T01:intron 40.0%
!! AAGAAAGCGTTGAGTTGTGA+AGG + Chr3:58692795-58692814 MsG0380014703.01.T01:intron 40.0%
!! AATTCTTGGTCTTGGAGTCA+TGG - Chr3:58687016-58687035 None:intergenic 40.0%
!! GCAAGGTTTTATGCCCAATT+CGG + Chr3:58692388-58692407 MsG0380014703.01.T01:intron 40.0%
!! GTCTATGCTTTGAAGAGACA+AGG + Chr3:58691885-58691904 MsG0380014703.01.T01:CDS 40.0%
!! TCCTTTTGGATCTGGTTTCT+TGG + Chr3:58693129-58693148 MsG0380014703.01.T01:intron 40.0%
!! TTTGGTCACAGGATTTTGGT+AGG - Chr3:58690972-58690991 None:intergenic 40.0%
!!! AGCAATGGTTTTTTCCTCTC+CGG - Chr3:58692749-58692768 None:intergenic 40.0%
!!! ATGATGGGGTGGTTTTTTCA+TGG + Chr3:58693001-58693020 MsG0380014703.01.T01:intron 40.0%
!!! CTTTTTTTAATGTCGGGGGA+GGG - Chr3:58688361-58688380 None:intergenic 40.0%
!!! GGAAGTGGAAATTTTTGGTG+GGG + Chr3:58690418-58690437 MsG0380014703.01.T01:intron 40.0%
!!! TCTTTTTTTAATGTCGGGGG+AGG - Chr3:58688362-58688381 None:intergenic 40.0%
!!! TTTTTTTAATGTCGGGGGAG+GGG - Chr3:58688360-58688379 None:intergenic 40.0%
AAGCCTCTCGATTGTCATGA+TGG + Chr3:58692985-58693004 MsG0380014703.01.T01:intron 45.0%
ACATTTGTACTCGAACTGCG+GGG + Chr3:58693070-58693089 MsG0380014703.01.T01:CDS 45.0%
ACGACATCCGTCATTGTTTG+GGG - Chr3:58686922-58686941 None:intergenic 45.0%
AGACAAGGAAGAACCCTCTA+TGG + Chr3:58691900-58691919 MsG0380014703.01.T01:CDS 45.0%
AGCCTCTCGATTGTCATGAT+GGG + Chr3:58692986-58693005 MsG0380014703.01.T01:intron 45.0%
ATAGCAACATGTGGTGGTAG+CGG - Chr3:58686979-58686998 None:intergenic 45.0%
ATCAACCTCCGAAACCATAG+AGG - Chr3:58691917-58691936 None:intergenic 45.0%
ATCCCCTCTAGACTTTCAGA+AGG - Chr3:58687445-58687464 None:intergenic 45.0%
ATGAGAGAGAGAGAGAGAGA+GGG - Chr3:58688786-58688805 None:intergenic 45.0%
CAACACATGGCTTCCGAATT+GGG - Chr3:58692404-58692423 None:intergenic 45.0%
CAACGACATCCGTCATTGTT+TGG - Chr3:58686924-58686943 None:intergenic 45.0%
CACGTAAGTGCAAAACTTCG+AGG - Chr3:58689918-58689937 None:intergenic 45.0%
CATTGTGCCCCAAACAATGA+CGG + Chr3:58686912-58686931 MsG0380014703.01.T01:CDS 45.0%
CGACCATATATACGTAGAGC+AGG + Chr3:58689327-58689346 MsG0380014703.01.T01:intron 45.0%
CGTAAGTGCAAAACTTCGAG+GGG - Chr3:58689916-58689935 None:intergenic 45.0%
CTACCACCACATGTTGCTAT+TGG + Chr3:58686979-58686998 MsG0380014703.01.T01:CDS 45.0%
CTCAGTAAAGTAGTCTCGTC+TGG - Chr3:58693342-58693361 None:intergenic 45.0%
CTCTCTCTCTCTCTCATCAA+TGG + Chr3:58688789-58688808 MsG0380014703.01.T01:intron 45.0%
CTGTTGAAAATGTCAGGTCG+TGG + Chr3:58691615-58691634 MsG0380014703.01.T01:intron 45.0%
CTTGATGTGTGGTTTAGTCC+AGG + Chr3:58693179-58693198 MsG0380014703.01.T01:intron 45.0%
CTTGGAGTCATGGAAGAGTT+TGG - Chr3:58687006-58687025 None:intergenic 45.0%
GAAAATGTCAGGTCGTGGAA+AGG + Chr3:58691620-58691639 MsG0380014703.01.T01:intron 45.0%
GAAGATCTTCAAGACACCTC+TGG - Chr3:58691790-58691809 None:intergenic 45.0%
GGAAGAACCCTCTATGGTTT+CGG + Chr3:58691906-58691925 MsG0380014703.01.T01:CDS 45.0%
GGACCGTATACCTACGTATA+GGG - Chr3:58689295-58689314 None:intergenic 45.0%
GTAAGTGCAAAACTTCGAGG+GGG - Chr3:58689915-58689934 None:intergenic 45.0%
GTGGAATGACCAATGTTCGA+AGG - Chr3:58688338-58688357 None:intergenic 45.0%
TAAGTGCAAAACTTCGAGGG+GGG - Chr3:58689914-58689933 None:intergenic 45.0%
TAATGTTCACACTAGCCGCA+AGG + Chr3:58692371-58692390 MsG0380014703.01.T01:intron 45.0%
TAATTTGGGAGATGTTGCGG+AGG + Chr3:58692700-58692719 MsG0380014703.01.T01:CDS 45.0%
TACAAGAGCTCCAGCAACTA+TGG + Chr3:58686870-58686889 MsG0380014703.01.T01:CDS 45.0%
TCAACACATGGCTTCCGAAT+TGG - Chr3:58692405-58692424 None:intergenic 45.0%
TCAACCTCCGAAACCATAGA+GGG - Chr3:58691916-58691935 None:intergenic 45.0%
TCTCTCATCAATGGACGTAG+TGG + Chr3:58688798-58688817 MsG0380014703.01.T01:intron 45.0%
TCTTCTTGCCAATCGACGAA+TGG - Chr3:58691727-58691746 None:intergenic 45.0%
TGCACCTGCCAATCACAATA+AGG - Chr3:58689358-58689377 None:intergenic 45.0%
TTACATACACTGAGCACGCT+AGG + Chr3:58691835-58691854 MsG0380014703.01.T01:CDS 45.0%
TTCCTTTGAATCCTAACGGG+GGG + Chr3:58690279-58690298 MsG0380014703.01.T01:intron 45.0%
TTGATGTTTCTCAGTGGCTG+TGG + Chr3:58693281-58693300 MsG0380014703.01.T01:intron 45.0%
TTTGGCCCAATAGCAACATG+TGG - Chr3:58686988-58687007 None:intergenic 45.0%
! ACTATGGACGAATTTTGGGC+TGG + Chr3:58687054-58687073 MsG0380014703.01.T01:CDS 45.0%
! AGGCGCAAAGGCTTTTTGAT+TGG + Chr3:58692815-58692834 MsG0380014703.01.T01:intron 45.0%
! ATTCGTCGATTGGCAAGAAG+AGG + Chr3:58691726-58691745 MsG0380014703.01.T01:CDS 45.0%
! GGATCTGGTTTCTTGGAAGT+TGG + Chr3:58693136-58693155 MsG0380014703.01.T01:intron 45.0%
! TGCCTTCTGAAAGTCTAGAG+GGG + Chr3:58687440-58687459 MsG0380014703.01.T01:intron 45.0%
! TGTGTTTTCTTCTGCGTCGT+TGG - Chr3:58691474-58691493 None:intergenic 45.0%
! TTGGGCTGGATTGGATGATT+CGG + Chr3:58687068-58687087 MsG0380014703.01.T01:CDS 45.0%
!! AAGGTAATTGGTAGCGAGAG+CGG - Chr3:58691522-58691541 None:intergenic 45.0%
!! CAAACAATGACGGATGTCGT+TGG + Chr3:58686922-58686941 MsG0380014703.01.T01:CDS 45.0%
!! CTCTAGAATACTCACGTCTC+CGG - Chr3:58691048-58691067 None:intergenic 45.0%
!! TGGTAGTGTCCTTTTGGATC+TGG + Chr3:58693121-58693140 MsG0380014703.01.T01:intron 45.0%
!!! ATTTTTATATTTTTTTCTAA+GGG + Chr3:58687300-58687319 MsG0380014703.01.T01:intron 5.0%
!!! TAAATTTTATATAAAATTAG+TGG - Chr3:58687656-58687675 None:intergenic 5.0%
AAAGCCTGCCATTCGTCGAT+TGG + Chr3:58691716-58691735 MsG0380014703.01.T01:CDS 50.0%
AACTGCGGGGAGATATTGGA+TGG + Chr3:58693083-58693102 MsG0380014703.01.T01:CDS 50.0%
AAGTGCAAAACTTCGAGGGG+GGG - Chr3:58689913-58689932 None:intergenic 50.0%
AAGTGCAAAACTTTCGGGGG+CGG + Chr3:58690761-58690780 MsG0380014703.01.T01:intron 50.0%
ACAGAATAGGATGTGCGAGG+AGG + Chr3:58692888-58692907 MsG0380014703.01.T01:intron 50.0%
ACCCCATCATGACAATCGAG+AGG - Chr3:58692991-58693010 None:intergenic 50.0%
AGAACCCTCTATGGTTTCGG+AGG + Chr3:58691909-58691928 MsG0380014703.01.T01:CDS 50.0%
AGGTGCAACTTGACAGATGG+AGG + Chr3:58689371-58689390 MsG0380014703.01.T01:intron 50.0%
CGAGAGCGGGATGAATAAGA+GGG - Chr3:58691508-58691527 None:intergenic 50.0%
CTTGAGTTCGCCATAGTTGC+TGG - Chr3:58686883-58686902 None:intergenic 50.0%
GAACATGGTGAGTGCATGTG+AGG + Chr3:58692648-58692667 MsG0380014703.01.T01:intron 50.0%
GACAACATCCATGGCAGTGA+CGG - Chr3:58691868-58691887 None:intergenic 50.0%
GAGAGCGGGATGAATAAGAG+GGG - Chr3:58691507-58691526 None:intergenic 50.0%
GATGAGAGAGAGAGAGAGAG+AGG - Chr3:58688787-58688806 None:intergenic 50.0%
GCCTCTCGATTGTCATGATG+GGG + Chr3:58692987-58693006 MsG0380014703.01.T01:intron 50.0%
GGGACCGTATACCTACGTAT+AGG - Chr3:58689296-58689315 None:intergenic 50.0%
GGTGCAACTTGACAGATGGA+GGG + Chr3:58689372-58689391 MsG0380014703.01.T01:intron 50.0%
GTACAGCCACACTTGTCAGA+TGG - Chr3:58690552-58690571 None:intergenic 50.0%
TGAGAGAGAGAGAGAGAGAG+GGG - Chr3:58688785-58688804 None:intergenic 50.0%
TGGAGCTCTTGTATCCACAG+AGG - Chr3:58686863-58686882 None:intergenic 50.0%
TGTATGAATGGATGCCGGAG+AGG + Chr3:58692732-58692751 MsG0380014703.01.T01:intron 50.0%
TTCCCCCCGTTAGGATTCAA+AGG - Chr3:58690284-58690303 None:intergenic 50.0%
! AGGGAGGTGCAAAGAGACAT+AGG + Chr3:58691661-58691680 MsG0380014703.01.T01:CDS 50.0%
! GGCGGTGTTAAGAGAATCAG+TGG + Chr3:58691747-58691766 MsG0380014703.01.T01:CDS 50.0%
! GTTGAGTTGTGAAGGCGCAA+AGG + Chr3:58692803-58692822 MsG0380014703.01.T01:intron 50.0%
! TCTCGATTGTCATGATGGGG+TGG + Chr3:58692990-58693009 MsG0380014703.01.T01:intron 50.0%
!! AGGTAATTGGTAGCGAGAGC+GGG - Chr3:58691521-58691540 None:intergenic 50.0%
!! AGTGGCTGTGGCTTTGTTTC+AGG + Chr3:58693293-58693312 MsG0380014703.01.T01:intron 50.0%
!! GGACGAATTTTGGGCTGGAT+TGG + Chr3:58687059-58687078 MsG0380014703.01.T01:CDS 50.0%
!! GTTGGTTGAAGCACTGTCGA+AGG - Chr3:58687103-58687122 None:intergenic 50.0%
AGGTCGTGGAAAGGGAGGTA+AGG + Chr3:58691629-58691648 MsG0380014703.01.T01:intron 55.0%
AGTGCAAAACTTCGAGGGGG+GGG - Chr3:58689912-58689931 None:intergenic 55.0%
ATGGCTTTCTTCCCCCCGTT+AGG - Chr3:58690293-58690312 None:intergenic 55.0%
ATGTCAGGTCGTGGAAAGGG+AGG + Chr3:58691624-58691643 MsG0380014703.01.T01:intron 55.0%
CATACACTGAGCACGCTAGG+AGG + Chr3:58691838-58691857 MsG0380014703.01.T01:CDS 55.0%
CTCGAACTGCGGGGAGATAT+TGG + Chr3:58693079-58693098 MsG0380014703.01.T01:CDS 55.0%
CTTGCCAATCGACGAATGGC+AGG - Chr3:58691723-58691742 None:intergenic 55.0%
GCAACAAACTGGTGCCTCTG+TGG + Chr3:58686846-58686865 MsG0380014703.01.T01:CDS 55.0%
GCGAGAGCGGGATGAATAAG+AGG - Chr3:58691509-58691528 None:intergenic 55.0%
GGAAAGGGAGGTAAGGGACT+CGG + Chr3:58691636-58691655 MsG0380014703.01.T01:CDS 55.0%
GGAGGTAAGGGACTCGGAAA+GGG + Chr3:58691642-58691661 MsG0380014703.01.T01:CDS 55.0%
GGCAGGTGCAACTTGACAGA+TGG + Chr3:58689368-58689387 MsG0380014703.01.T01:intron 55.0%
GGCCCAATAGCAACATGTGG+TGG - Chr3:58686985-58687004 None:intergenic 55.0%
GGTCGTGGAAAGGGAGGTAA+GGG + Chr3:58691630-58691649 MsG0380014703.01.T01:intron 55.0%
TTGGTCGCAGTCATCCTCAC+AGG + Chr3:58687962-58687981 MsG0380014703.01.T01:intron 55.0%
! CGTCGATTGGCAAGAAGAGG+CGG + Chr3:58691729-58691748 MsG0380014703.01.T01:CDS 55.0%
! TGGCAGGCTTTGTGATACCC+TGG - Chr3:58691707-58691726 None:intergenic 55.0%
! TTTTAATGTCGGGGGAGGGG+TGG - Chr3:58688357-58688376 None:intergenic 55.0%
GAGGAAGACCGTCACTGCCA+TGG + Chr3:58691857-58691876 MsG0380014703.01.T01:CDS 60.0%
GGGAGGTAAGGGACTCGGAA+AGG + Chr3:58691641-58691660 MsG0380014703.01.T01:CDS 60.0%
GGTAAGGGACTCGGAAAGGG+AGG + Chr3:58691645-58691664 MsG0380014703.01.T01:CDS 60.0%
GTGCAAAACTTCGAGGGGGG+GGG - Chr3:58689911-58689930 None:intergenic 60.0%
TGCAAAACTTCGAGGGGGGG+GGG - Chr3:58689910-58689929 None:intergenic 60.0%
! AGCGGCGGTGGTGGTAATGT+TGG - Chr3:58686961-58686980 None:intergenic 60.0%
!! GCAACATGTGGTGGTAGCGG+CGG - Chr3:58686976-58686995 None:intergenic 60.0%
GCAAAACTTCGAGGGGGGGG+GGG - Chr3:58689909-58689928 None:intergenic 65.0%
!! ACATGTGGTGGTAGCGGCGG+TGG - Chr3:58686973-58686992 None:intergenic 65.0%
!! TGTGGTGGTAGCGGCGGTGG+TGG - Chr3:58686970-58686989 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 58686628 58693364 58686628 ID=MsG0380014703.01;Name=MsG0380014703.01
Chr3 mRNA 58686628 58693364 58686628 ID=MsG0380014703.01.T01;Parent=MsG0380014703.01;Name=MsG0380014703.01.T01;_AED=0.50;_eAED=0.61;_QI=0|0|0|1|1|1|6|0|280
Chr3 exon 58686628 58686682 58686628 ID=MsG0380014703.01.T01:exon:18925;Parent=MsG0380014703.01.T01
Chr3 exon 58686833 58687108 58686833 ID=MsG0380014703.01.T01:exon:18926;Parent=MsG0380014703.01.T01
Chr3 exon 58691631 58691930 58691631 ID=MsG0380014703.01.T01:exon:18927;Parent=MsG0380014703.01.T01
Chr3 exon 58692660 58692728 58692660 ID=MsG0380014703.01.T01:exon:18928;Parent=MsG0380014703.01.T01
Chr3 exon 58693032 58693104 58693032 ID=MsG0380014703.01.T01:exon:18929;Parent=MsG0380014703.01.T01
Chr3 exon 58693295 58693364 58693295 ID=MsG0380014703.01.T01:exon:18930;Parent=MsG0380014703.01.T01
Chr3 CDS 58686628 58686682 58686628 ID=MsG0380014703.01.T01:cds;Parent=MsG0380014703.01.T01
Chr3 CDS 58686833 58687108 58686833 ID=MsG0380014703.01.T01:cds;Parent=MsG0380014703.01.T01
Chr3 CDS 58691631 58691930 58691631 ID=MsG0380014703.01.T01:cds;Parent=MsG0380014703.01.T01
Chr3 CDS 58692660 58692728 58692660 ID=MsG0380014703.01.T01:cds;Parent=MsG0380014703.01.T01
Chr3 CDS 58693032 58693104 58693032 ID=MsG0380014703.01.T01:cds;Parent=MsG0380014703.01.T01
Chr3 CDS 58693295 58693364 58693295 ID=MsG0380014703.01.T01:cds;Parent=MsG0380014703.01.T01
Gene Sequence

>MsG0380014703.01.T01

ATGGAGCATGGCGATTCCTTCTTTCACAATGATCAAAATCCAAATTCAAATTCTGATTCATTTATGTTGCAACAAACTGGTGCCTCTGTGGATACAAGAGCTCCAGCAACTATGGCGAACTCAAGCAATGATGTCATTGTGCCCCAAACAATGACGGATGTCGTTGGTGAGATTACTAATCCAACATTACCACCACCGCCGCTACCACCACATGTTGCTATTGGGCCAAACTCTTCCATGACTCCAAGACCAAGAATTGAATTGGTTGAAGCAATCACTATGGACGAATTTTGGGCTGGATTGGATGATTCGGATGTCAGTTCCTTCGACAGTCGTGGAAAGGGAGGTAAGGGACTCGGAAAGGGAGGTGCAAAGAGACATAGGAAAGTTCTTCGTGATAACATCCAGGGTATCACAAAGCCTGCCATTCGTCGATTGGCAAGAAGAGGCGGTGTTAAGAGAATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTCTTGAAGATCTTCTTGGAAAACGTCATTCGTGATGCAGTTACATACACTGAGCACGCTAGGAGGAAGACCGTCACTGCCATGGATGTTGTCTATGCTTTGAAGAGACAAGGAAGAACCCTCTATGGTTTCGGAGTGCATGTGAGGTGTTTGAGAGAAATTTTGTCTCGTTATGTTAATTTGGGAGATGTTGCGGAGGACAAATATAGTTGGAATTCAAGATTGCCTTCAGAATGCATTGATACATTTGTACTCGAACTGCGGGGAGATATTGGATGTGGCTGTGGCTTTGTTTCAGGAAATGCAGATTCTTGGAATTTGACCAGACGAGACTACTTTACTGAGTGA

Protein sequence

>MsG0380014703.01.T01

MEHGDSFFHNDQNPNSNSDSFMLQQTGASVDTRAPATMANSSNDVIVPQTMTDVVGEITNPTLPPPPLPPHVAIGPNSSMTPRPRIELVEAITMDEFWAGLDDSDVSSFDSRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVHVRCLREILSRYVNLGDVAEDKYSWNSRLPSECIDTFVLELRGDIGCGCGFVSGNADSWNLTRRDYFTE*