AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045117.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045117.01.T01 MTR_4g126140 62.366 186 11 3 1 128 214 398 3.08e-61 204
MsG0880045117.01.T01 MTR_8g066010 55.491 173 32 3 1 128 29 201 4.49e-42 146
MsG0880045117.01.T01 MTR_6g084410 34.254 181 59 7 4 128 255 431 2.16e-13 68.9
MsG0880045117.01.T01 MTR_8g104340 30.128 156 80 3 2 128 146 301 1.48e-11 63.5
MsG0880045117.01.T01 MTR_8g104340 30.128 156 80 3 2 128 146 301 1.63e-11 63.2
MsG0880045117.01.T01 MTR_8g104340 30.128 156 80 3 2 128 146 301 1.75e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045117.01.T01 AT4G29750 41.420 169 57 4 2 128 284 452 3.93e-28 112
MsG0880045117.01.T01 AT4G29750 41.420 169 57 4 2 128 284 452 4.00e-28 111
MsG0880045117.01.T01 AT3G18390 31.522 184 64 6 3 128 284 463 1.23e-14 72.8

Find 62 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGCTTGATTAAAATAA+AGG 0.255749 8:-54417991 None:intergenic
TGATGAAGTTGTTAAGTTTA+AGG 0.260144 8:+54415094 MsG0880045117.01.T01:CDS
GTAATATATGTAAATTATTT+CGG 0.291037 8:+54420504 MsG0880045117.01.T01:three_prime_UTR
TTGCTTAATCAGAGTAAAAC+TGG 0.294825 8:+54415538 MsG0880045117.01.T01:intron
CATGACAGTCATTTCCTTGT+TGG 0.330729 8:-54415867 None:intergenic
TGTAATCTGTTCGTCGGTTC+AGG 0.347675 8:-54418034 None:intergenic
CTTTCACATGTTACATCACT+TGG 0.388106 8:-54420481 None:intergenic
TCGTCGGTTCAGGCCTCTCC+TGG 0.416276 8:-54418024 None:intergenic
TACTCCCACTCCGAACACTA+TGG 0.420049 8:-54415585 None:intergenic
TAATTGCAAGCACCTGGTAT+TGG 0.430500 8:-54420102 None:intergenic
CACTCAGACTTCTTCCGTAT+GGG 0.434433 8:+54415828 MsG0880045117.01.T01:CDS
ATGCATTTGCAGAAATTGAC+TGG 0.442160 8:+54417963 MsG0880045117.01.T01:intron
TATGAGTGAAGAAGAATCAA+TGG 0.453532 8:+54415684 MsG0880045117.01.T01:CDS
CCAGTGTCGAGTACAGAATC+TGG 0.477521 8:-54420024 None:intergenic
CTATTTGACTTGAGCATCAT+GGG 0.477925 8:+54420327 MsG0880045117.01.T01:three_prime_UTR
AGACTCTGCAGAGTATTTGA+AGG 0.479473 8:+54415660 MsG0880045117.01.T01:CDS
GCTATTTGACTTGAGCATCA+TGG 0.488661 8:+54420326 MsG0880045117.01.T01:three_prime_UTR
TCTCGATTAAAAGATTCAAC+AGG 0.488740 8:-54415640 None:intergenic
ACGGCGCCGCACTTTGCCCT+TGG 0.488842 8:+54415908 MsG0880045117.01.T01:CDS
ATTTCGGTATAGAATGATGA+AGG 0.491425 8:+54420520 MsG0880045117.01.T01:three_prime_UTR
ACTGTGAAGATAAACAATAA+TGG 0.503171 8:+54420352 MsG0880045117.01.T01:three_prime_UTR
GACCCAACTCATCTAACAAA+AGG 0.510309 8:-54415723 None:intergenic
GTTCCATGTGACCCATCAAA+AGG 0.510628 8:-54420407 None:intergenic
GGCGATCGTTCCATAGTGTT+CGG 0.511275 8:+54415575 MsG0880045117.01.T01:CDS
TTTCACATGTTACATCACTT+GGG 0.514038 8:-54420480 None:intergenic
TGCATTTGCAGAAATTGACT+GGG 0.522489 8:+54417964 MsG0880045117.01.T01:intron
CCACTCAGACTTCTTCCGTA+TGG 0.525668 8:+54415827 MsG0880045117.01.T01:CDS
TTCACATGTTACATCACTTG+GGG 0.531431 8:-54420479 None:intergenic
AAACAAGGTTTCACCCCATA+CGG 0.539368 8:-54415842 None:intergenic
TGAAGTAAGTGTGAAAGAAA+TGG 0.547015 8:+54415612 MsG0880045117.01.T01:CDS
ATTTAGTAATTGCAAGCACC+TGG 0.554134 8:-54420108 None:intergenic
AAGCACCTGGTATTGGTCTA+CGG 0.559721 8:-54420095 None:intergenic
GAGTAAAACTGGAGGTATTG+TGG 0.560101 8:+54415549 MsG0880045117.01.T01:intron
TTGTTACAAAGAGATAGTAT+AGG 0.566360 8:-54418082 None:intergenic
CGTTCCATAGTGTTCGGAGT+GGG 0.568527 8:+54415581 MsG0880045117.01.T01:CDS
AAGAGCTCATCAAATTCTTG+AGG 0.576570 8:+54415145 MsG0880045117.01.T01:CDS
CCAGATTCTGTACTCGACAC+TGG 0.576638 8:+54420024 MsG0880045117.01.T01:CDS
ATACTATCTCTTTGTAACAA+AGG 0.580671 8:+54418085 MsG0880045117.01.T01:CDS
TAGATTTCTATCAATGTCGT+AGG 0.584266 8:+54420451 MsG0880045117.01.T01:three_prime_UTR
GAACCGACGAACAGATTACA+TGG 0.590578 8:+54418037 MsG0880045117.01.T01:CDS
CAAGTGATGTAACATGTGAA+AGG 0.602433 8:+54420482 MsG0880045117.01.T01:three_prime_UTR
ATTTCCTTGTTGGATAAACA+AGG 0.603660 8:-54415857 None:intergenic
ATGTGACCCATCAAAAGGCA+TGG 0.611306 8:-54420402 None:intergenic
AGTGTTCGGAGTGGGAGTAG+TGG 0.612721 8:+54415589 MsG0880045117.01.T01:CDS
ACTCAGACTTCTTCCGTATG+GGG 0.616651 8:+54415829 MsG0880045117.01.T01:CDS
AGGAAATGACTGTCATGCGT+AGG 0.623211 8:+54415873 MsG0880045117.01.T01:CDS
GTAAGTGTGAAAGAAATGGT+TGG 0.627154 8:+54415616 MsG0880045117.01.T01:CDS
AGCAAAGAAATCTATAAACC+AGG 0.627591 8:+54418006 MsG0880045117.01.T01:CDS
TCACCATGTAATCTGTTCGT+CGG 0.628215 8:-54418040 None:intergenic
TGCATACCAAGGGCAAAGTG+CGG 0.628833 8:-54415914 None:intergenic
AGAAATCTATAAACCAGGAG+AGG 0.631419 8:+54418011 MsG0880045117.01.T01:CDS
ACAGATTACATGGTGACAGT+CGG 0.638102 8:+54418047 MsG0880045117.01.T01:CDS
GCGTAGGATTGCTAGAAGAA+CGG 0.641061 8:+54415889 MsG0880045117.01.T01:CDS
AGTCATCATGAGAAGAAACA+TGG 0.641416 8:-54420054 None:intergenic
TCACATGTTACATCACTTGG+GGG 0.644040 8:-54420478 None:intergenic
GAAACCTTGTTTATCCAACA+AGG 0.665865 8:+54415853 MsG0880045117.01.T01:CDS
GCATTTGCAGAAATTGACTG+GGG 0.670583 8:+54417965 MsG0880045117.01.T01:intron
CTTAATCAGAGTAAAACTGG+AGG 0.676737 8:+54415541 MsG0880045117.01.T01:intron
TCGTTCCATAGTGTTCGGAG+TGG 0.683989 8:+54415580 MsG0880045117.01.T01:CDS
CATTTGCAGAAATTGACTGG+GGG 0.692019 8:+54417966 MsG0880045117.01.T01:intron
AAACTGGAGGTATTGTGGTG+TGG 0.705901 8:+54415554 MsG0880045117.01.T01:CDS
CCATACGGAAGAAGTCTGAG+TGG 0.735230 8:-54415827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATATTATATGGTTAT+AGG + Chr8:54419199-54419218 MsG0880045117.01.T01:intron 10.0%
!! ATATAATAATTATTTATCGT+GGG + Chr8:54419642-54419661 MsG0880045117.01.T01:intron 10.0%
!! GTAATATATGTAAATTATTT+CGG + Chr8:54420504-54420523 MsG0880045117.01.T01:three_prime_UTR 10.0%
!! ATATTGCTACTAAATATTAT+TGG - Chr8:54420152-54420171 None:intergenic 15.0%
!! CACGATAAATAATTATTATA+TGG - Chr8:54419643-54419662 None:intergenic 15.0%
!! CATATAATAATTATTTATCG+TGG + Chr8:54419641-54419660 MsG0880045117.01.T01:intron 15.0%
!! TTTATAAAGTTAGATAGATA+TGG - Chr8:54419182-54419201 None:intergenic 15.0%
!!! AATCAAACAAAATTTTTCAT+GGG - Chr8:54417734-54417753 None:intergenic 15.0%
!!! TAATCAAACAAAATTTTTCA+TGG - Chr8:54417735-54417754 None:intergenic 15.0%
!!! TTAGTCTTATGATATAATAT+TGG - Chr8:54417185-54417204 None:intergenic 15.0%
!! AAAAAAAGTCAGAACAATAT+GGG - Chr8:54417697-54417716 None:intergenic 20.0%
!! AAAAGATTTACTATTCTTAC+TGG + Chr8:54415980-54415999 MsG0880045117.01.T01:intron 20.0%
!! AACAAAGGTAAAATAAAATG+TGG + Chr8:54418100-54418119 MsG0880045117.01.T01:intron 20.0%
!! AGGAATATATTGTAATTTAC+AGG + Chr8:54418809-54418828 MsG0880045117.01.T01:intron 20.0%
!! ATACTTAGGTTTATATGTTA+TGG - Chr8:54416848-54416867 None:intergenic 20.0%
!! ATGTATTAAGCTTAATATGA+TGG - Chr8:54418519-54418538 None:intergenic 20.0%
!! CTTGTATAAAATCACATTAT+AGG + Chr8:54417556-54417575 MsG0880045117.01.T01:intron 20.0%
!! GAATATATTGTAATTTACAG+GGG + Chr8:54418811-54418830 MsG0880045117.01.T01:intron 20.0%
!! GGAATATATTGTAATTTACA+GGG + Chr8:54418810-54418829 MsG0880045117.01.T01:intron 20.0%
!! TAAAAAAAGTCAGAACAATA+TGG - Chr8:54417698-54417717 None:intergenic 20.0%
!! TCTATATGTAGAAAGAAATA+GGG + Chr8:54417039-54417058 MsG0880045117.01.T01:intron 20.0%
!! TCTTTGCTTGATTAAAATAA+AGG - Chr8:54417994-54418013 None:intergenic 20.0%
!! TTCTATATGTAGAAAGAAAT+AGG + Chr8:54417038-54417057 MsG0880045117.01.T01:intron 20.0%
!! TTTCTATTGTAACATTATCA+GGG + Chr8:54417420-54417439 MsG0880045117.01.T01:intron 20.0%
!!! AGAATTTTATCATGCTTAAA+AGG + Chr8:54416201-54416220 MsG0880045117.01.T01:intron 20.0%
!!! AGATAGTTTTTGAATGATTT+TGG - Chr8:54416743-54416762 None:intergenic 20.0%
!!! AGTAAGAATAGTAAATCTTT+TGG - Chr8:54415981-54416000 None:intergenic 20.0%
!!! AGTTTCTAAATTTTCTTTTC+AGG + Chr8:54419818-54419837 MsG0880045117.01.T01:intron 20.0%
!!! ATAATGTGATTTTATACAAG+CGG - Chr8:54417556-54417575 None:intergenic 20.0%
!!! GACTTTTTTTATTGAGTTTT+GGG + Chr8:54417707-54417726 MsG0880045117.01.T01:intron 20.0%
!!! GATAGTTTTTGAATGATTTT+GGG - Chr8:54416742-54416761 None:intergenic 20.0%
!!! TAATTTTTCACACATTCATA+GGG - Chr8:54418206-54418225 None:intergenic 20.0%
!!! TGACTTTTTTTATTGAGTTT+TGG + Chr8:54417706-54417725 MsG0880045117.01.T01:intron 20.0%
!!! TGTCAGTTATGTTTAATTTT+AGG - Chr8:54416801-54416820 None:intergenic 20.0%
!!! TTATTAACTTTTTATGTCAG+TGG - Chr8:54416941-54416960 None:intergenic 20.0%
!!! TTTTCTATTGTAACATTATC+AGG + Chr8:54417419-54417438 MsG0880045117.01.T01:intron 20.0%
! AAAAAAGTCAGAACAATATG+GGG - Chr8:54417696-54417715 None:intergenic 25.0%
! AAAAATTATTCTCCCAATCT+CGG + Chr8:54418449-54418468 MsG0880045117.01.T01:intron 25.0%
! AAACCCATAAGTTTAAAGAA+AGG - Chr8:54417936-54417955 None:intergenic 25.0%
! AAAGGTAAAATAAAATGTGG+TGG + Chr8:54418103-54418122 MsG0880045117.01.T01:intron 25.0%
! AAGGATTTAGCTAAAATACA+GGG + Chr8:54419248-54419267 MsG0880045117.01.T01:intron 25.0%
! AATAATTATTATATGGCCCT+TGG - Chr8:54419636-54419655 None:intergenic 25.0%
! AATATACTATTACAGCATAC+AGG + Chr8:54416674-54416693 MsG0880045117.01.T01:intron 25.0%
! ACATTTATCAGAAAATGAAG+TGG - Chr8:54416495-54416514 None:intergenic 25.0%
! ACTAAAAAGAGATAGAATCA+TGG + Chr8:54417153-54417172 MsG0880045117.01.T01:intron 25.0%
! ACTGTGAAGATAAACAATAA+TGG + Chr8:54420352-54420371 MsG0880045117.01.T01:three_prime_UTR 25.0%
! ATACTATCTCTTTGTAACAA+AGG + Chr8:54418085-54418104 MsG0880045117.01.T01:CDS 25.0%
! CATGATAAATATGAACAAGA+AGG - Chr8:54417886-54417905 None:intergenic 25.0%
! CTCATATTATTTGGCAAATA+TGG - Chr8:54418760-54418779 None:intergenic 25.0%
! GCATTAGACAAAAGTTTAAT+GGG - Chr8:54416348-54416367 None:intergenic 25.0%
! GCTACTAAATATTATTGGTA+AGG - Chr8:54420147-54420166 None:intergenic 25.0%
! GTATAAAATCACATTATAGG+TGG + Chr8:54417559-54417578 MsG0880045117.01.T01:intron 25.0%
! GTTCCTTTCTTTAAACTTAT+GGG + Chr8:54417930-54417949 MsG0880045117.01.T01:intron 25.0%
! GTTTGATTAATAATACCCAA+AGG + Chr8:54417746-54417765 MsG0880045117.01.T01:intron 25.0%
! TAGAAAACATTCATCTACAT+TGG + Chr8:54419493-54419512 MsG0880045117.01.T01:intron 25.0%
! TCATGATTTCTGATTAAAGA+AGG - Chr8:54419091-54419110 None:intergenic 25.0%
! TCTTGTAAATGAGAATATCA+GGG + Chr8:54416303-54416322 MsG0880045117.01.T01:intron 25.0%
! TCTTGTTCATATTTATCATG+TGG + Chr8:54417886-54417905 MsG0880045117.01.T01:intron 25.0%
! TGATGAAGTTGTTAAGTTTA+AGG + Chr8:54415094-54415113 MsG0880045117.01.T01:CDS 25.0%
! TGCATTAGACAAAAGTTTAA+TGG - Chr8:54416349-54416368 None:intergenic 25.0%
! TGTTCCTTTCTTTAAACTTA+TGG + Chr8:54417929-54417948 MsG0880045117.01.T01:intron 25.0%
! TTCTTGTAAATGAGAATATC+AGG + Chr8:54416302-54416321 MsG0880045117.01.T01:intron 25.0%
! TTGGTAAAAATACTTGTGAA+GGG + Chr8:54419527-54419546 MsG0880045117.01.T01:intron 25.0%
! TTGTTACAAAGAGATAGTAT+AGG - Chr8:54418085-54418104 None:intergenic 25.0%
! TTTCCTATACATCTAATGAT+AGG + Chr8:54416103-54416122 MsG0880045117.01.T01:intron 25.0%
!! AGTTTTTCCAAAGAGAATAA+TGG - Chr8:54420238-54420257 None:intergenic 25.0%
!! AGTTTTTCGCAATTTAGAAA+GGG - Chr8:54417462-54417481 None:intergenic 25.0%
!! ATAAGCATGATATATTTTCC+TGG + Chr8:54417001-54417020 MsG0880045117.01.T01:intron 25.0%
!! ATGTAGATGAATGTTTTCTA+TGG - Chr8:54419493-54419512 None:intergenic 25.0%
!! ATTCCTTATTTCAGAAAGTA+AGG - Chr8:54418795-54418814 None:intergenic 25.0%
!! GTAATTTTTCACACATTCAT+AGG - Chr8:54418207-54418226 None:intergenic 25.0%
!! GTTTTTCCAAAGAGAATAAT+GGG - Chr8:54420237-54420256 None:intergenic 25.0%
!! TAAGCATGATATATTTTCCT+GGG + Chr8:54417002-54417021 MsG0880045117.01.T01:intron 25.0%
!! TAATATTGTCCAATTTCTAG+CGG - Chr8:54416161-54416180 None:intergenic 25.0%
!! TTACTCTGCTGTAATAATTT+TGG + Chr8:54419925-54419944 MsG0880045117.01.T01:intron 25.0%
!! TTTTCATCTGAAAATAGCAA+AGG + Chr8:54416461-54416480 MsG0880045117.01.T01:intron 25.0%
!!! AAGTTTTTTGTTGTGATTTC+AGG + Chr8:54419968-54419987 MsG0880045117.01.T01:intron 25.0%
!!! AGATTGGGAGAATAATTTTT+TGG - Chr8:54418449-54418468 None:intergenic 25.0%
!!! ATTAAGTTGATTGTCCAAAA+TGG + Chr8:54415381-54415400 MsG0880045117.01.T01:intron 25.0%
!!! ATTCATTTTGATAAAGACGA+CGG + Chr8:54420274-54420293 MsG0880045117.01.T01:three_prime_UTR 25.0%
!!! GATTGGGAGAATAATTTTTT+GGG - Chr8:54418448-54418467 None:intergenic 25.0%
!!! GTAGAAACTGACTTTTTTTA+TGG + Chr8:54416570-54416589 MsG0880045117.01.T01:intron 25.0%
!!! TTAAGTTGATTGTCCAAAAT+GGG + Chr8:54415382-54415401 MsG0880045117.01.T01:intron 25.0%
AACAACAATGTGTGATACTT+AGG - Chr8:54416862-54416881 None:intergenic 30.0%
AACCAAGTAAACAAGAAGTT+GGG + Chr8:54419032-54419051 MsG0880045117.01.T01:intron 30.0%
AATGATAAGAGAATCTACCT+TGG + Chr8:54419057-54419076 MsG0880045117.01.T01:intron 30.0%
AGAATATCAGGGATAAGATT+AGG + Chr8:54416314-54416333 MsG0880045117.01.T01:intron 30.0%
AGAATATTGTTTATCTACCC+AGG - Chr8:54417022-54417041 None:intergenic 30.0%
AGCAAAGAAATCTATAAACC+AGG + Chr8:54418006-54418025 MsG0880045117.01.T01:CDS 30.0%
AGGAGGATATGAAAAATCAA+AGG + Chr8:54419988-54420007 MsG0880045117.01.T01:intron 30.0%
ATATCGCAATATGCTTAACT+TGG - Chr8:54419565-54419584 None:intergenic 30.0%
ATCTTACGAGACTTAGAAAT+AGG - Chr8:54417821-54417840 None:intergenic 30.0%
ATGCTATTATGTTTATTCCG+CGG + Chr8:54417065-54417084 MsG0880045117.01.T01:intron 30.0%
ATTGAAAACGATTGCATCTT+TGG - Chr8:54415422-54415441 None:intergenic 30.0%
ATTTCCTTGTTGGATAAACA+AGG - Chr8:54415860-54415879 None:intergenic 30.0%
ATTTCGGTATAGAATGATGA+AGG + Chr8:54420520-54420539 MsG0880045117.01.T01:three_prime_UTR 30.0%
CAATTGAAACATGAGCATAT+AGG + Chr8:54416370-54416389 MsG0880045117.01.T01:intron 30.0%
CACACATATATCAGATTTAC+AGG + Chr8:54419849-54419868 MsG0880045117.01.T01:intron 30.0%
CATCCTATCATTAGATGTAT+AGG - Chr8:54416109-54416128 None:intergenic 30.0%
CTATACATCTAATGATAGGA+TGG + Chr8:54416107-54416126 MsG0880045117.01.T01:intron 30.0%
GAAAAATCAAAGGTGATTGA+TGG + Chr8:54419998-54420017 MsG0880045117.01.T01:CDS 30.0%
GAAGGATTTAGCTAAAATAC+AGG + Chr8:54419247-54419266 MsG0880045117.01.T01:intron 30.0%
GGAATAAATCAAGCAATGTA+AGG - Chr8:54416780-54416799 None:intergenic 30.0%
GGTAACAACAGATAGTATTT+GGG - Chr8:54419161-54419180 None:intergenic 30.0%
GTTTCTAACACGATGATAAA+AGG - Chr8:54416527-54416546 None:intergenic 30.0%
TAAAGTGTATCTGACTTATC+TGG + Chr8:54416430-54416449 MsG0880045117.01.T01:intron 30.0%
TAAGCATATTGCGATATCTT+TGG + Chr8:54419568-54419587 MsG0880045117.01.T01:intron 30.0%
TAATAGATGCTTTCAAGACA+AGG - Chr8:54418726-54418745 None:intergenic 30.0%
TACATTGGAAATATTCCAGT+TGG + Chr8:54419508-54419527 MsG0880045117.01.T01:intron 30.0%
TAGATTTCTATCAATGTCGT+AGG + Chr8:54420451-54420470 MsG0880045117.01.T01:three_prime_UTR 30.0%
TATAGTTGCATACATCCTTT+GGG - Chr8:54417764-54417783 None:intergenic 30.0%
TATCGCAATATGCTTAACTT+GGG - Chr8:54419564-54419583 None:intergenic 30.0%
TATGAGTGAAGAAGAATCAA+TGG + Chr8:54415684-54415703 MsG0880045117.01.T01:CDS 30.0%
TCTAAATTGCGAAAAACTCT+TGG + Chr8:54417464-54417483 MsG0880045117.01.T01:intron 30.0%
TCTCGATTAAAAGATTCAAC+AGG - Chr8:54415643-54415662 None:intergenic 30.0%
TGAAGTAAGTGTGAAAGAAA+TGG + Chr8:54415612-54415631 MsG0880045117.01.T01:CDS 30.0%
TGGTAACAACAGATAGTATT+TGG - Chr8:54419162-54419181 None:intergenic 30.0%
TTATAGGTGGTCTATATTCA+CGG + Chr8:54417572-54417591 MsG0880045117.01.T01:intron 30.0%
TTCTTACCTAGAAGTAAGTA+TGG - Chr8:54419364-54419383 None:intergenic 30.0%
TTGCTTAATCAGAGTAAAAC+TGG + Chr8:54415538-54415557 MsG0880045117.01.T01:intron 30.0%
TTTCACATGTTACATCACTT+GGG - Chr8:54420483-54420502 None:intergenic 30.0%
! AACCTTTTGTTAGATGAGTT+GGG + Chr8:54415721-54415740 MsG0880045117.01.T01:CDS 30.0%
! AGATCTTTGTTTAGGAAGAT+GGG + Chr8:54419325-54419344 MsG0880045117.01.T01:intron 30.0%
! AGTTTTTGAATGATTTTGGG+AGG - Chr8:54416739-54416758 None:intergenic 30.0%
! ATGAAGACAGATCTTTGTTT+AGG + Chr8:54419317-54419336 MsG0880045117.01.T01:intron 30.0%
! ATTTGGGAAGTTATTTCAGT+TGG - Chr8:54419145-54419164 None:intergenic 30.0%
! CACGGTTTGATAATATTCAT+GGG + Chr8:54417590-54417609 MsG0880045117.01.T01:intron 30.0%
! CTTTGGAAAAACTAGAATGA+AGG + Chr8:54420245-54420264 MsG0880045117.01.T01:intron 30.0%
! CTTTTCATATTAGCAGAAAG+AGG - Chr8:54415128-54415147 None:intergenic 30.0%
! GAGTTTTTCGCAATTTAGAA+AGG - Chr8:54417463-54417482 None:intergenic 30.0%
! GTTGGTAAAAATACTTGTGA+AGG + Chr8:54419526-54419545 MsG0880045117.01.T01:intron 30.0%
! GTTTTTCGCAATTTAGAAAG+GGG - Chr8:54417461-54417480 None:intergenic 30.0%
! TAAGAAAGTGATAATGTGAG+AGG - Chr8:54415184-54415203 None:intergenic 30.0%
! TCACGGTTTGATAATATTCA+TGG + Chr8:54417589-54417608 MsG0880045117.01.T01:intron 30.0%
! TCTACAGCTAAATCGTATTT+TGG - Chr8:54416555-54416574 None:intergenic 30.0%
! TTTTGTAGTATTCGTGCATT+TGG + Chr8:54417785-54417804 MsG0880045117.01.T01:intron 30.0%
! TTTTTGCCCATTATTCTCTT+TGG + Chr8:54420228-54420247 MsG0880045117.01.T01:intron 30.0%
!! AAAATAAAATGTGGTGGATC+TGG + Chr8:54418109-54418128 MsG0880045117.01.T01:intron 30.0%
!! AAGCGAGTTTAAAGTTTTCA+GGG + Chr8:54416894-54416913 MsG0880045117.01.T01:intron 30.0%
!! GAACCTTACTTTCTGAAATA+AGG + Chr8:54418789-54418808 MsG0880045117.01.T01:intron 30.0%
!! GAATAATGGGCAAAAAAAAG+AGG - Chr8:54420224-54420243 None:intergenic 30.0%
!! GTTAAAAGCATGAGATTTTC+AGG + Chr8:54419444-54419463 MsG0880045117.01.T01:intron 30.0%
!! GTTTTTGAATGATTTTGGGA+GGG - Chr8:54416738-54416757 None:intergenic 30.0%
!! TCACAAGTATTTTTACCAAC+TGG - Chr8:54419526-54419545 None:intergenic 30.0%
!!! CTGCTGTAATAATTTTGGTT+TGG + Chr8:54419930-54419949 MsG0880045117.01.T01:intron 30.0%
!!! TTTTTTGTTGTGATTTCAGG+AGG + Chr8:54419971-54419990 MsG0880045117.01.T01:intron 30.0%
AAGAGCTCATCAAATTCTTG+AGG + Chr8:54415145-54415164 MsG0880045117.01.T01:CDS 35.0%
AATCAGATGACCTAAGTCAA+TGG + Chr8:54417314-54417333 MsG0880045117.01.T01:intron 35.0%
AGAAATCTATAAACCAGGAG+AGG + Chr8:54418011-54418030 MsG0880045117.01.T01:CDS 35.0%
AGTCATCATGAGAAGAAACA+TGG - Chr8:54420057-54420076 None:intergenic 35.0%
ATAAAACAAACCCATCTGTG+TGG + Chr8:54416227-54416246 MsG0880045117.01.T01:intron 35.0%
ATGAAGCCATACTTACTTCT+AGG + Chr8:54419355-54419374 MsG0880045117.01.T01:intron 35.0%
ATGACCTAAGTCAATGGAAT+AGG + Chr8:54417320-54417339 MsG0880045117.01.T01:intron 35.0%
ATGCATTTGCAGAAATTGAC+TGG + Chr8:54417963-54417982 MsG0880045117.01.T01:intron 35.0%
ATTGATCAGCATCAAGGTAA+AGG - Chr8:54415778-54415797 None:intergenic 35.0%
ATTTAGTAATTGCAAGCACC+TGG - Chr8:54420111-54420130 None:intergenic 35.0%
CAAATAATATGAGTGACTGG+GGG + Chr8:54418767-54418786 MsG0880045117.01.T01:intron 35.0%
CAACCAAGTAAACAAGAAGT+TGG + Chr8:54419031-54419050 MsG0880045117.01.T01:intron 35.0%
CAAGTGATGTAACATGTGAA+AGG + Chr8:54420482-54420501 MsG0880045117.01.T01:three_prime_UTR 35.0%
CAGAATTCACACACAAACTA+AGG + Chr8:54416643-54416662 MsG0880045117.01.T01:intron 35.0%
CATAATGTGTGTGACTTTCA+TGG + Chr8:54417355-54417374 MsG0880045117.01.T01:intron 35.0%
CCAAATAATATGAGTGACTG+GGG + Chr8:54418766-54418785 MsG0880045117.01.T01:intron 35.0%
CTATTGAGCTTCAAAGAAAG+AGG + Chr8:54419733-54419752 MsG0880045117.01.T01:intron 35.0%
CTTAATCAGAGTAAAACTGG+AGG + Chr8:54415541-54415560 MsG0880045117.01.T01:intron 35.0%
CTTTCACATGTTACATCACT+TGG - Chr8:54420484-54420503 None:intergenic 35.0%
GCCAAATAATATGAGTGACT+GGG + Chr8:54418765-54418784 MsG0880045117.01.T01:intron 35.0%
GGAAGAAATAGAGAACTTCA+AGG + Chr8:54416013-54416032 MsG0880045117.01.T01:intron 35.0%
GTAAGTGTGAAAGAAATGGT+TGG + Chr8:54415616-54415635 MsG0880045117.01.T01:CDS 35.0%
GTATAGTTGCATACATCCTT+TGG - Chr8:54417765-54417784 None:intergenic 35.0%
GTTAATGTCTCCAAATCAGT+TGG - Chr8:54419295-54419314 None:intergenic 35.0%
TAATATGATGGTTCCTCGTT+TGG - Chr8:54418507-54418526 None:intergenic 35.0%
TAGAGCTATAGTAAAGCTGT+GGG + Chr8:54416042-54416061 MsG0880045117.01.T01:intron 35.0%
TATAGGCAAAAGCAAGGTTA+AGG + Chr8:54419216-54419235 MsG0880045117.01.T01:intron 35.0%
TATGGTTATAGGCAAAAGCA+AGG + Chr8:54419210-54419229 MsG0880045117.01.T01:intron 35.0%
TCTCATAAACCGCTAGAAAT+TGG + Chr8:54416149-54416168 MsG0880045117.01.T01:intron 35.0%
TGCAAAAATAGTCATCAACG+TGG + Chr8:54416078-54416097 MsG0880045117.01.T01:intron 35.0%
TGCATTTGCAGAAATTGACT+GGG + Chr8:54417964-54417983 MsG0880045117.01.T01:intron 35.0%
TGCCAAATAATATGAGTGAC+TGG + Chr8:54418764-54418783 MsG0880045117.01.T01:intron 35.0%
TTACGAGACTTAGAAATAGG+TGG - Chr8:54417818-54417837 None:intergenic 35.0%
TTCACATGTTACATCACTTG+GGG - Chr8:54420482-54420501 None:intergenic 35.0%
! AAAAGCTTTTAACCATCAGC+TGG - Chr8:54418293-54418312 None:intergenic 35.0%
! AAAGTGATAATGTGAGAGGA+AGG - Chr8:54415180-54415199 None:intergenic 35.0%
! ATGTGATTTTATACAAGCGG+TGG - Chr8:54417553-54417572 None:intergenic 35.0%
! CAACCTTTTGTTAGATGAGT+TGG + Chr8:54415720-54415739 MsG0880045117.01.T01:CDS 35.0%
! CAACTTCTTGTTTACTTGGT+TGG - Chr8:54419033-54419052 None:intergenic 35.0%
! CAGATCTTTGTTTAGGAAGA+TGG + Chr8:54419324-54419343 MsG0880045117.01.T01:intron 35.0%
! GAAACCTTGTTTATCCAACA+AGG + Chr8:54415853-54415872 MsG0880045117.01.T01:CDS 35.0%
! GTCTTCTATTTCTTCTGCTA+TGG - Chr8:54418633-54418652 None:intergenic 35.0%
! TAGTTTTTGTCTCTCAGTCA+GGG - Chr8:54418869-54418888 None:intergenic 35.0%
! TGTGATTTTATACAAGCGGT+GGG - Chr8:54417552-54417571 None:intergenic 35.0%
! TTCCCAACTTCTTGTTTACT+TGG - Chr8:54419037-54419056 None:intergenic 35.0%
! TTTTCACACATTCATAGGGA+GGG - Chr8:54418202-54418221 None:intergenic 35.0%
! TTTTTCACACATTCATAGGG+AGG - Chr8:54418203-54418222 None:intergenic 35.0%
!! AAGTGATTTGCTGCTATTGA+AGG + Chr8:54417641-54417660 MsG0880045117.01.T01:intron 35.0%
!! CAAGCGAGTTTAAAGTTTTC+AGG + Chr8:54416893-54416912 MsG0880045117.01.T01:intron 35.0%
!! CTATTTGACTTGAGCATCAT+GGG + Chr8:54420327-54420346 MsG0880045117.01.T01:three_prime_UTR 35.0%
!! GATGTTTGCTATAGAGAAAG+CGG - Chr8:54418368-54418387 None:intergenic 35.0%
!! TTAGTTTTTGTCTCTCAGTC+AGG - Chr8:54418870-54418889 None:intergenic 35.0%
!! TTGTGAAGTATCACCCATTT+TGG - Chr8:54415398-54415417 None:intergenic 35.0%
!!! AAAGCATGAGATTTTCAGGT+AGG + Chr8:54419448-54419467 MsG0880045117.01.T01:intron 35.0%
!!! TGGGAGAATAATTTTTTGGG+AGG - Chr8:54418445-54418464 None:intergenic 35.0%
AAACAAGGTTTCACCCCATA+CGG - Chr8:54415845-54415864 None:intergenic 40.0%
AAGGTTAAGGAAGTCTGAGA+AGG + Chr8:54419229-54419248 MsG0880045117.01.T01:intron 40.0%
ACAGATTACATGGTGACAGT+CGG + Chr8:54418047-54418066 MsG0880045117.01.T01:CDS 40.0%
ACCAAGACTCTCGAATTTCT+TGG - Chr8:54416711-54416730 None:intergenic 40.0%
ACCAATAAGCACAGTATGGT+AGG - Chr8:54417519-54417538 None:intergenic 40.0%
ACCTACCATACTGTGCTTAT+TGG + Chr8:54417515-54417534 MsG0880045117.01.T01:intron 40.0%
AGCTTAATACATCCCAAACG+AGG + Chr8:54418527-54418546 MsG0880045117.01.T01:intron 40.0%
AGCTTCAAAGAAAGAGGTAG+AGG + Chr8:54419739-54419758 MsG0880045117.01.T01:intron 40.0%
ATCTGTAGACAAGGATACCA+AGG + Chr8:54419616-54419635 MsG0880045117.01.T01:intron 40.0%
ATGTCTCCAAATCAGTTGGA+AGG - Chr8:54419291-54419310 None:intergenic 40.0%
CAATAGCAGCAAATCACTTG+TGG - Chr8:54417640-54417659 None:intergenic 40.0%
CATGACAGTCATTTCCTTGT+TGG - Chr8:54415870-54415889 None:intergenic 40.0%
CATTTGCAGAAATTGACTGG+GGG + Chr8:54417966-54417985 MsG0880045117.01.T01:intron 40.0%
CCCCAGTCACTCATATTATT+TGG - Chr8:54418769-54418788 None:intergenic 40.0%
CTACCTAAAACTGCACACAA+CGG + Chr8:54416822-54416841 MsG0880045117.01.T01:intron 40.0%
CTAGAGCTATAGTAAAGCTG+TGG + Chr8:54416041-54416060 MsG0880045117.01.T01:intron 40.0%
CTTAATACATCCCAAACGAG+GGG + Chr8:54418529-54418548 MsG0880045117.01.T01:intron 40.0%
GACCCAACTCATCTAACAAA+AGG - Chr8:54415726-54415745 None:intergenic 40.0%
GATTGAGACAGATTCGTTGA+TGG - Chr8:54418320-54418339 None:intergenic 40.0%
GCATTTGCAGAAATTGACTG+GGG + Chr8:54417965-54417984 MsG0880045117.01.T01:intron 40.0%
GCTTAATACATCCCAAACGA+GGG + Chr8:54418528-54418547 MsG0880045117.01.T01:intron 40.0%
GGGCAAAAAAAAGAGGAACA+AGG - Chr8:54420217-54420236 None:intergenic 40.0%
GGTCTACGGAAAAAAGATTC+AGG - Chr8:54420084-54420103 None:intergenic 40.0%
GTAGTCAATTTGTCTGTGCT+TGG - Chr8:54416970-54416989 None:intergenic 40.0%
TAAAATATCTCCTTGAGCCG+CGG - Chr8:54417085-54417104 None:intergenic 40.0%
TAATTGCAAGCACCTGGTAT+TGG - Chr8:54420105-54420124 None:intergenic 40.0%
TCAAAACATTGGCCATGCTT+CGG - Chr8:54418416-54418435 None:intergenic 40.0%
TCAACTGATAACCCAGTTGA+GGG - Chr8:54417224-54417243 None:intergenic 40.0%
TCACACCAATAAGCACAGTA+TGG - Chr8:54417523-54417542 None:intergenic 40.0%
TCACATGTTACATCACTTGG+GGG - Chr8:54420481-54420500 None:intergenic 40.0%
TCACCATGTAATCTGTTCGT+CGG - Chr8:54418043-54418062 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG + Chr8:54416707-54416726 MsG0880045117.01.T01:intron 40.0%
TCTCAAATGTCGTTACTTGC+TGG + Chr8:54418965-54418984 MsG0880045117.01.T01:intron 40.0%
TCTGTAGACAAGGATACCAA+GGG + Chr8:54419617-54419636 MsG0880045117.01.T01:intron 40.0%
TCTTCGTGACAACAAGCTTT+GGG - Chr8:54419697-54419716 None:intergenic 40.0%
TGTCTGATTAAAGCGTGAGT+GGG + Chr8:54418695-54418714 MsG0880045117.01.T01:intron 40.0%
TTAATACATCCCAAACGAGG+GGG + Chr8:54418530-54418549 MsG0880045117.01.T01:intron 40.0%
TTCAACTGATAACCCAGTTG+AGG - Chr8:54417225-54417244 None:intergenic 40.0%
TTCAGGGAATTGCCAAAGTT+AGG + Chr8:54416910-54416929 MsG0880045117.01.T01:intron 40.0%
TTGAAGGATAAGCCTGAATG+TGG + Chr8:54417657-54417676 MsG0880045117.01.T01:intron 40.0%
TTTATACCCTGGAACAACAG+CGG - Chr8:54415804-54415823 None:intergenic 40.0%
! ACTCTTTTAGTCAACAGCCA+AGG - Chr8:54416259-54416278 None:intergenic 40.0%
! AGACTCTGCAGAGTATTTGA+AGG + Chr8:54415660-54415679 MsG0880045117.01.T01:CDS 40.0%
! ATATCTTTGGAAGCTGAGAG+TGG + Chr8:54419581-54419600 MsG0880045117.01.T01:intron 40.0%
! CAATCGTTTTCAATGCAGTG+TGG + Chr8:54415428-54415447 MsG0880045117.01.T01:intron 40.0%
! GGAGGTTTTGCTCAAAACAT+TGG - Chr8:54418427-54418446 None:intergenic 40.0%
! TTTTTCCGTAGACCAATACC+AGG + Chr8:54420090-54420109 MsG0880045117.01.T01:CDS 40.0%
!! AGTGCCTATTCCATTGACTT+AGG - Chr8:54417327-54417346 None:intergenic 40.0%
!! CATTTTGATAAAGACGACGG+TGG + Chr8:54420277-54420296 MsG0880045117.01.T01:three_prime_UTR 40.0%
!! GAGTAAAACTGGAGGTATTG+TGG + Chr8:54415549-54415568 MsG0880045117.01.T01:intron 40.0%
!! GCTATTTGACTTGAGCATCA+TGG + Chr8:54420326-54420345 MsG0880045117.01.T01:three_prime_UTR 40.0%
!! TAGCTTTAACGTAGCTGCTT+TGG + Chr8:54419398-54419417 MsG0880045117.01.T01:intron 40.0%
!! TGGTGTTGTTATCCGAGATT+GGG - Chr8:54418464-54418483 None:intergenic 40.0%
!! TTGGTGTTGTTATCCGAGAT+TGG - Chr8:54418465-54418484 None:intergenic 40.0%
!!! TCATGGTGTCTGCTTTGTTT+TGG + Chr8:54417372-54417391 MsG0880045117.01.T01:intron 40.0%
AAATCAGTTGGAAGGTCTGC+TGG - Chr8:54419283-54419302 None:intergenic 45.0%
AACCTTTCTCCAACAAGACG+AGG + Chr8:54418888-54418907 MsG0880045117.01.T01:intron 45.0%
AATTACCCGCTGTTGTTCCA+GGG + Chr8:54415795-54415814 MsG0880045117.01.T01:intron 45.0%
ACTCAGACTTCTTCCGTATG+GGG + Chr8:54415829-54415848 MsG0880045117.01.T01:CDS 45.0%
AGCACAGTATGGTAGGTTCA+AGG - Chr8:54417512-54417531 None:intergenic 45.0%
AGCAGACCTTCCAACTGATT+TGG + Chr8:54419282-54419301 MsG0880045117.01.T01:intron 45.0%
AGCATCAAGGTAAAGGCTCA+CGG - Chr8:54415771-54415790 None:intergenic 45.0%
AGGAAATGACTGTCATGCGT+AGG + Chr8:54415873-54415892 MsG0880045117.01.T01:CDS 45.0%
AGGAAGATTGAGGCCATTCT+TGG + Chr8:54418153-54418172 MsG0880045117.01.T01:intron 45.0%
AGTGCAAGCTAGGAAGATTG+AGG + Chr8:54418143-54418162 MsG0880045117.01.T01:intron 45.0%
ATGTGACCCATCAAAAGGCA+TGG - Chr8:54420405-54420424 None:intergenic 45.0%
CACTCAGACTTCTTCCGTAT+GGG + Chr8:54415828-54415847 MsG0880045117.01.T01:CDS 45.0%
CAGAAGAAATAGAAGACCCC+TGG + Chr8:54418636-54418655 MsG0880045117.01.T01:intron 45.0%
CATGGTGACAGTCGGAAAAA+AGG + Chr8:54418055-54418074 MsG0880045117.01.T01:CDS 45.0%
CGGGTAATTGATCAGCATCA+AGG - Chr8:54415784-54415803 None:intergenic 45.0%
GAACCGACGAACAGATTACA+TGG + Chr8:54418037-54418056 MsG0880045117.01.T01:CDS 45.0%
GAGAGCTTCTTGCATACCAA+GGG - Chr8:54415927-54415946 None:intergenic 45.0%
GCGTAGGATTGCTAGAAGAA+CGG + Chr8:54415889-54415908 MsG0880045117.01.T01:CDS 45.0%
GCTGATGCTTTAGCCAAGAA+TGG - Chr8:54418169-54418188 None:intergenic 45.0%
GTCTGATTAAAGCGTGAGTG+GGG + Chr8:54418696-54418715 MsG0880045117.01.T01:intron 45.0%
GTCTTCGTGACAACAAGCTT+TGG - Chr8:54419698-54419717 None:intergenic 45.0%
GTGTCTGATTAAAGCGTGAG+TGG + Chr8:54418694-54418713 MsG0880045117.01.T01:intron 45.0%
GTTCCATGTGACCCATCAAA+AGG - Chr8:54420410-54420429 None:intergenic 45.0%
GTTTGTGGCTGAGTTAAGTG+CGG - Chr8:54418392-54418411 None:intergenic 45.0%
TAGGATGGCTGAAGAACTCA+AGG + Chr8:54416122-54416141 MsG0880045117.01.T01:intron 45.0%
TATGTTTATTCCGCGGCTCA+AGG + Chr8:54417072-54417091 MsG0880045117.01.T01:intron 45.0%
TCAGTGGCATAGCCTAACTT+TGG - Chr8:54416925-54416944 None:intergenic 45.0%
TGAGAGCTTCTTGCATACCA+AGG - Chr8:54415928-54415947 None:intergenic 45.0%
TGCATGCAAGAACCACATTC+AGG - Chr8:54417672-54417691 None:intergenic 45.0%
TTATACCCTGGAACAACAGC+GGG - Chr8:54415803-54415822 None:intergenic 45.0%
TTGTCAACCTTCCCTCAACT+GGG + Chr8:54417210-54417229 MsG0880045117.01.T01:intron 45.0%
TTTCTCTCTCCTCGTCTTGT+TGG - Chr8:54418900-54418919 None:intergenic 45.0%
TTTGTCAACCTTCCCTCAAC+TGG + Chr8:54417209-54417228 MsG0880045117.01.T01:intron 45.0%
! ACTTGAGCCATGCCTTTTGA+TGG + Chr8:54420395-54420414 MsG0880045117.01.T01:three_prime_UTR 45.0%
! AGCTTTTAACCATCAGCTGG+AGG - Chr8:54418290-54418309 None:intergenic 45.0%
! CTGAGTGGTGTTTTATACCC+TGG - Chr8:54415815-54415834 None:intergenic 45.0%
! CTTGAGCCATGCCTTTTGAT+GGG + Chr8:54420396-54420415 MsG0880045117.01.T01:three_prime_UTR 45.0%
! CTTTTAGTCAACAGCCAAGG+AGG - Chr8:54416256-54416275 None:intergenic 45.0%
! GCGGCTCAAGGAGATATTTT+AGG + Chr8:54417084-54417103 MsG0880045117.01.T01:intron 45.0%
! TCAACATCCGCACCCTTTTT+CGG - Chr8:54418607-54418626 None:intergenic 45.0%
! TGAGACAGATTCGTTGATGG+TGG - Chr8:54418317-54418336 None:intergenic 45.0%
! TTCCTAGCTTGCACTCTCAA+TGG - Chr8:54418138-54418157 None:intergenic 45.0%
! TTGTCTCTCAGTCAGGGTTT+TGG - Chr8:54418863-54418882 None:intergenic 45.0%
!! AAACTGGAGGTATTGTGGTG+TGG + Chr8:54415554-54415573 MsG0880045117.01.T01:CDS 45.0%
!! AAGCACCTGGTATTGGTCTA+CGG - Chr8:54420098-54420117 None:intergenic 45.0%
!! AAGCTTGTTGTCACGAAGAC+AGG + Chr8:54419698-54419717 MsG0880045117.01.T01:intron 45.0%
!! ATGCCTTTTGATGGGTCACA+TGG + Chr8:54420404-54420423 MsG0880045117.01.T01:three_prime_UTR 45.0%
!! GGTGCTGATATCTGTAGACA+AGG + Chr8:54419607-54419626 MsG0880045117.01.T01:intron 45.0%
!! GTTTGCTATAGAGAAAGCGG+TGG - Chr8:54418365-54418384 None:intergenic 45.0%
!! TGTAATCTGTTCGTCGGTTC+AGG - Chr8:54418037-54418056 None:intergenic 45.0%
!! ACTTTATAAATTATATTATA+TGG + Chr8:54419192-54419211 MsG0880045117.01.T01:intron 5.0%
AAAGCGGTGGAGATGCATTG+GGG - Chr8:54418352-54418371 None:intergenic 50.0%
ACGACCTTCTTGGAAGACAC+CGG + Chr8:54418560-54418579 MsG0880045117.01.T01:intron 50.0%
AGAAAGCGGTGGAGATGCAT+TGG - Chr8:54418354-54418373 None:intergenic 50.0%
ATGGGAGTGAGTGAGTGCTA+TGG + Chr8:54417608-54417627 MsG0880045117.01.T01:intron 50.0%
CAATTACCCGCTGTTGTTCC+AGG + Chr8:54415794-54415813 MsG0880045117.01.T01:intron 50.0%
CATCTGACACGCAACATCCA+AGG + Chr8:54418262-54418281 MsG0880045117.01.T01:intron 50.0%
CCACTCAGACTTCTTCCGTA+TGG + Chr8:54415827-54415846 MsG0880045117.01.T01:CDS 50.0%
CCAGATTCTGTACTCGACAC+TGG + Chr8:54420024-54420043 MsG0880045117.01.T01:CDS 50.0%
CCATACGGAAGAAGTCTGAG+TGG - Chr8:54415830-54415849 None:intergenic 50.0%
CGTTCCATAGTGTTCGGAGT+GGG + Chr8:54415581-54415600 MsG0880045117.01.T01:CDS 50.0%
CTGAGTTCCACTTTGCTCCA+GGG - Chr8:54418656-54418675 None:intergenic 50.0%
CTGATAACCCAGTTGAGGGA+AGG - Chr8:54417220-54417239 None:intergenic 50.0%
CTTGGATGTTGCGTGTCAGA+TGG - Chr8:54418264-54418283 None:intergenic 50.0%
GAAAGCGGTGGAGATGCATT+GGG - Chr8:54418353-54418372 None:intergenic 50.0%
GGAAGAACTATTCCGTCCAC+AGG + Chr8:54419663-54419682 MsG0880045117.01.T01:intron 50.0%
GGCGATCGTTCCATAGTGTT+CGG + Chr8:54415575-54415594 MsG0880045117.01.T01:CDS 50.0%
GGTAGGCGAGATGTTTATGC+TGG + Chr8:54419465-54419484 MsG0880045117.01.T01:intron 50.0%
GTTGTCACGAAGACAGGCAT+TGG + Chr8:54419704-54419723 MsG0880045117.01.T01:intron 50.0%
TAAGCCGGTGTCTTCCAAGA+AGG - Chr8:54418567-54418586 None:intergenic 50.0%
TACTCCCACTCCGAACACTA+TGG - Chr8:54415588-54415607 None:intergenic 50.0%
TAGGGCAGCAACTGCCAATT+GGG + Chr8:54419003-54419022 MsG0880045117.01.T01:intron 50.0%
TCGTTCCATAGTGTTCGGAG+TGG + Chr8:54415580-54415599 MsG0880045117.01.T01:CDS 50.0%
TGAGTTCCACTTTGCTCCAG+GGG - Chr8:54418655-54418674 None:intergenic 50.0%
TGCATACCAAGGGCAAAGTG+CGG - Chr8:54415917-54415936 None:intergenic 50.0%
TGGAACCCTTGCTGAGACTA+GGG + Chr8:54418985-54419004 MsG0880045117.01.T01:intron 50.0%
TGGGTCTCATAACCTGTGGA+CGG - Chr8:54419678-54419697 None:intergenic 50.0%
TGTCTTCCAAGAAGGTCGTG+TGG - Chr8:54418559-54418578 None:intergenic 50.0%
TTTGGAAGCTGAGAGTGGTG+GGG + Chr8:54419586-54419605 MsG0880045117.01.T01:intron 50.0%
! ACTTGGTTGGTGTCCCCAAT+TGG - Chr8:54419020-54419039 None:intergenic 50.0%
! ATTCTTACTGGCTGCACTGC+AGG + Chr8:54415992-54416011 MsG0880045117.01.T01:intron 50.0%
! CAACATCCGCACCCTTTTTC+GGG - Chr8:54418606-54418625 None:intergenic 50.0%
! CACCATTGAGAGTGCAAGCT+AGG + Chr8:54418133-54418152 MsG0880045117.01.T01:intron 50.0%
! CCAGTGTCGAGTACAGAATC+TGG - Chr8:54420027-54420046 None:intergenic 50.0%
! CTAGCTTGCACTCTCAATGG+TGG - Chr8:54418135-54418154 None:intergenic 50.0%
! CTCCTCGTCTTGTTGGAGAA+AGG - Chr8:54418893-54418912 None:intergenic 50.0%
! CTTTGGAAGCTGAGAGTGGT+GGG + Chr8:54419585-54419604 MsG0880045117.01.T01:intron 50.0%
! GAAAAAGGGTGCGGATGTTG+AGG + Chr8:54418606-54418625 MsG0880045117.01.T01:intron 50.0%
! GCTTTGGGTCTCATAACCTG+TGG - Chr8:54419682-54419701 None:intergenic 50.0%
! TCTTTGGAAGCTGAGAGTGG+TGG + Chr8:54419584-54419603 MsG0880045117.01.T01:intron 50.0%
! TGGCCGTTGTGTGCAGTTTT+AGG - Chr8:54416828-54416847 None:intergenic 50.0%
!! CCTGTCCAATCTTTGAAGCG+CGG - Chr8:54415748-54415767 None:intergenic 50.0%
AACACCAACGCACCTGACGA+AGG + Chr8:54418477-54418496 MsG0880045117.01.T01:intron 55.0%
AAGCGGTGGAGATGCATTGG+GGG - Chr8:54418351-54418370 None:intergenic 55.0%
AAGGAGGTCGCCACACAGAT+GGG - Chr8:54416240-54416259 None:intergenic 55.0%
ACACCAACGCACCTGACGAA+GGG + Chr8:54418478-54418497 MsG0880045117.01.T01:intron 55.0%
ACCATCAGCTGGAGGTTCCT+TGG - Chr8:54418282-54418301 None:intergenic 55.0%
AGAAGACCCCTGGAGCAAAG+TGG + Chr8:54418646-54418665 MsG0880045117.01.T01:intron 55.0%
AGATGCATTGGGGGGATGTC+TGG - Chr8:54418342-54418361 None:intergenic 55.0%
AGGGCAGCAACTGCCAATTG+GGG + Chr8:54419004-54419023 MsG0880045117.01.T01:intron 55.0%
AGTGTTCGGAGTGGGAGTAG+TGG + Chr8:54415589-54415608 MsG0880045117.01.T01:CDS 55.0%
CCGCGCTTCAAAGATTGGAC+AGG + Chr8:54415745-54415764 MsG0880045117.01.T01:intron 55.0%
CTAGGGCAGCAACTGCCAAT+TGG + Chr8:54419002-54419021 MsG0880045117.01.T01:intron 55.0%
CTGGAACCCTTGCTGAGACT+AGG + Chr8:54418984-54419003 MsG0880045117.01.T01:intron 55.0%
GAGAAGCCCGAAAAAGGGTG+CGG + Chr8:54418597-54418616 MsG0880045117.01.T01:intron 55.0%
GCTGAGTTCCACTTTGCTCC+AGG - Chr8:54418657-54418676 None:intergenic 55.0%
GGAGCAAAGTGGAACTCAGC+TGG + Chr8:54418657-54418676 MsG0880045117.01.T01:intron 55.0%
TCCAAGGAACCTCCAGCTGA+TGG + Chr8:54418278-54418297 MsG0880045117.01.T01:intron 55.0%
TGCTGCCCTAGTCTCAGCAA+GGG - Chr8:54418993-54419012 None:intergenic 55.0%
TGGGTCCGCGCTTCAAAGAT+TGG + Chr8:54415740-54415759 MsG0880045117.01.T01:intron 55.0%
TTGCTGCCCTAGTCTCAGCA+AGG - Chr8:54418994-54419013 None:intergenic 55.0%
!! TGGAAGACACCGGCTTACGA+GGG + Chr8:54418570-54418589 MsG0880045117.01.T01:intron 55.0%
!! TTGGAAGACACCGGCTTACG+AGG + Chr8:54418569-54418588 MsG0880045117.01.T01:intron 55.0%
!!! AGGGTTTTGGTGACGACAGG+AGG - Chr8:54418850-54418869 None:intergenic 55.0%
!!! GTCAGGGTTTTGGTGACGAC+AGG - Chr8:54418853-54418872 None:intergenic 55.0%
AGCGGTGGAGATGCATTGGG+GGG - Chr8:54418350-54418369 None:intergenic 60.0%
CAAGGAGGTCGCCACACAGA+TGG - Chr8:54416241-54416260 None:intergenic 60.0%
CACCAACGCACCTGACGAAG+GGG + Chr8:54418479-54418498 MsG0880045117.01.T01:intron 60.0%
CAGCCACAAACGCCGAAGCA+TGG + Chr8:54418401-54418420 MsG0880045117.01.T01:intron 60.0%
CATCTGTGTGGCGACCTCCT+TGG + Chr8:54416239-54416258 MsG0880045117.01.T01:intron 60.0%
GCGCGGAGAAGCCCGAAAAA+GGG + Chr8:54418592-54418611 MsG0880045117.01.T01:intron 60.0%
TGACGAAGGGGAGCCAAACG+AGG + Chr8:54418491-54418510 MsG0880045117.01.T01:intron 60.0%
TGGCCATGCTTCGGCGTTTG+TGG - Chr8:54418407-54418426 None:intergenic 60.0%
! TCGTTTGGCTCCCCTTCGTC+AGG - Chr8:54418492-54418511 None:intergenic 60.0%
CTCCCCTTCGTCAGGTGCGT+TGG - Chr8:54418484-54418503 None:intergenic 65.0%
GGCGCGGAGAAGCCCGAAAA+AGG + Chr8:54418591-54418610 MsG0880045117.01.T01:intron 65.0%
GGGCTGCCACACGACCTTCT+TGG + Chr8:54418550-54418569 MsG0880045117.01.T01:intron 65.0%
GTGTGGCAGCCCCCTCGTTT+GGG - Chr8:54418542-54418561 None:intergenic 65.0%
TTCTCCGCGCCCTCGTAAGC+CGG - Chr8:54418582-54418601 None:intergenic 65.0%
!! TCGTCGGTTCAGGCCTCTCC+TGG - Chr8:54418027-54418046 None:intergenic 65.0%
ACGGCGCCGCACTTTGCCCT+TGG + Chr8:54415908-54415927 MsG0880045117.01.T01:CDS 70.0%
CGTGTGGCAGCCCCCTCGTT+TGG - Chr8:54418543-54418562 None:intergenic 70.0%
!! GACACCGGCTTACGAGGGCG+CGG + Chr8:54418575-54418594 MsG0880045117.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 54415089 54420561 54415089 ID=MsG0880045117.01;Name=MsG0880045117.01
Chr8 mRNA 54415089 54420561 54415089 ID=MsG0880045117.01.T01;Parent=MsG0880045117.01;Name=MsG0880045117.01.T01;_AED=0.39;_eAED=0.42;_QI=0|0.2|0.16|1|0|0|6|301|219
Chr8 exon 54415089 54415166 54415089 ID=MsG0880045117.01.T01:exon:23467;Parent=MsG0880045117.01.T01
Chr8 exon 54415550 54415742 54415550 ID=MsG0880045117.01.T01:exon:23468;Parent=MsG0880045117.01.T01
Chr8 exon 54415816 54415929 54415816 ID=MsG0880045117.01.T01:exon:23469;Parent=MsG0880045117.01.T01
Chr8 exon 54417975 54418106 54417975 ID=MsG0880045117.01.T01:exon:23470;Parent=MsG0880045117.01.T01
Chr8 exon 54419990 54420131 54419990 ID=MsG0880045117.01.T01:exon:23471;Parent=MsG0880045117.01.T01
Chr8 exon 54420260 54420561 54420260 ID=MsG0880045117.01.T01:exon:23472;Parent=MsG0880045117.01.T01
Chr8 CDS 54415089 54415166 54415089 ID=MsG0880045117.01.T01:cds;Parent=MsG0880045117.01.T01
Chr8 CDS 54415550 54415742 54415550 ID=MsG0880045117.01.T01:cds;Parent=MsG0880045117.01.T01
Chr8 CDS 54415816 54415929 54415816 ID=MsG0880045117.01.T01:cds;Parent=MsG0880045117.01.T01
Chr8 CDS 54417975 54418106 54417975 ID=MsG0880045117.01.T01:cds;Parent=MsG0880045117.01.T01
Chr8 CDS 54419990 54420131 54419990 ID=MsG0880045117.01.T01:cds;Parent=MsG0880045117.01.T01
Chr8 CDS 54420260 54420260 54420260 ID=MsG0880045117.01.T01:cds;Parent=MsG0880045117.01.T01
Chr8 three_prime_UTR 54420261 54420561 54420261 ID=MsG0880045117.01.T01:three_prime_utr;Parent=MsG0880045117.01.T01
Gene Sequence

>MsG0880045117.01.T01

ATGGTTGATGAAGTTGTTAAGTTTAAGGTTGATTCTCCTCTTTCTGCTAATATGAAAAGAGCTCATCAAATTCTTGAGAGTAAAACTGGAGGTATTGTGGTGTGGCGATCGTTCCATAGTGTTCGGAGTGGGAGTAGTGGTGAAGTAAGTGTGAAAGAAATGGTTGGACCTGTTGAATCTTTTAATCGAGACTCTGCAGAGTATTTGAAGGATATGAGTGAAGAAGAATCAATGGAATTGATCGAACTCAACCTTTTGTTAGATGAGTTGGGGTATAAAACACCACTCAGACTTCTTCCGTATGGGGTGAAACCTTGTTTATCCAACAAGGAAATGACTGTCATGCGTAGGATTGCTAGAAGAACGGCGCCGCACTTTGCCCTTGAAATTGACTGGGGGAACCTTTATTTTAATCAAGCAAAGAAATCTATAAACCAGGAGAGGCCTGAACCGACGAACAGATTACATGGTGACAGTCGGAAAAAAGGAAGACCTATACTATCTCTTTGTAACAAAGGAGGATATGAAAAATCAAAGGTGATTGATGGTGACCAGATTCTGTACTCGACACTGGATAACAACCATGTTTCTTCTCATGATGACTTGAACCTGAATCTTTTTTCCGTAGACCAATACCAGGTGCTTGCAATTACTAAATAA
Protein sequence

>MsG0880045117.01.T01

MVDEVVKFKVDSPLSANMKRAHQILESKTGGIVVWRSFHSVRSGSSGEVSVKEMVGPVESFNRDSAEYLKDMSEEESMELIELNLLLDELGYKTPLRLLPYGVKPCLSNKEMTVMRRIARRTAPHFALEIDWGNLYFNQAKKSINQERPEPTNRLHGDSRKKGRPILSLCNKGGYEKSKVIDGDQILYSTLDNNHVSSHDDLNLNLFSVDQYQVLAITK*