AlfalfaGEDB | MsG0580027018.01

M. sativa cultivar ZhongmuNo.1 / MsG0580027018.01

KEGG: K14795
GO: GO:0000469
PFAM: PF06102

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027018.01.T01	XP_003614714.1	89.655	203	20	1	1	202	1	203	1.05E-117	345

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027018.01.T01	B6K8A0	38.095	126	77	1	77	202	116	240	6.25E-20	88.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027018.01.T01	G7JXB6	89.655	203	20	1	1	202	1	203	5.01e-118	345

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0580027018.01	0.802233	6.182619e-49	3.012769e-46
MsG0080047925.01	MsG0580027018.01	0.805670	1.193410e-49	6.351634e-47
MsG0080048431.01	MsG0580027018.01	0.808325	3.273517e-50	1.866300e-47
MsG0080048874.01	MsG0580027018.01	0.808153	3.561380e-50	2.021213e-47
MsG0180000470.01	MsG0580027018.01	0.848732	5.081795e-60	9.416036e-57
MsG0180000650.01	MsG0580027018.01	0.811053	8.487303e-51	5.200766e-48
MsG0180001063.01	MsG0580027018.01	0.809538	1.800469e-50	1.059944e-47
MsG0180001971.01	MsG0580027018.01	0.801164	1.024331e-48	4.858284e-46
MsG0180002089.01	MsG0580027018.01	0.831520	1.593018e-55	1.732994e-52
MsG0180002234.01	MsG0580027018.01	0.822328	2.512983e-53	2.096797e-50
MsG0180002259.01	MsG0580027018.01	0.805652	1.203673e-49	6.403356e-47
MsG0180002282.01	MsG0580027018.01	0.802289	6.020436e-49	2.938043e-46
MsG0180002377.01	MsG0580027018.01	0.802660	5.048512e-49	2.486968e-46
MsG0180002563.01	MsG0580027018.01	0.804113	2.524878e-49	1.291015e-46
MsG0180002842.01	MsG0580027018.01	0.818236	2.177421e-52	1.620722e-49
MsG0180003673.01	MsG0580027018.01	0.811742	6.012124e-51	3.751537e-48
MsG0180003686.01	MsG0580027018.01	0.815080	1.110322e-51	7.580227e-49
MsG0180004264.01	MsG0580027018.01	0.847035	1.491551e-59	2.617017e-56
MsG0180004275.01	MsG0580027018.01	0.805311	1.419236e-49	7.484115e-47
MsG0180004426.01	MsG0580027018.01	0.800080	1.704461e-48	7.864618e-46
MsG0180004765.01	MsG0580027018.01	0.802282	6.040170e-49	2.947159e-46
MsG0180005705.01	MsG0580027018.01	0.822806	1.944889e-53	1.645003e-50
MsG0180006257.01	MsG0580027018.01	0.810171	1.315878e-50	7.876465e-48
MsG0280006324.01	MsG0580027018.01	0.800407	1.462598e-48	6.804937e-46
MsG0280006325.01	MsG0580027018.01	0.809243	2.083425e-50	1.216942e-47
MsG0380011494.01	MsG0580027018.01	0.801788	7.632639e-49	3.677450e-46
MsG0380011568.01	MsG0580027018.01	0.802620	5.145482e-49	2.532216e-46
MsG0380011609.01	MsG0580027018.01	0.809598	1.748363e-50	1.030943e-47
MsG0380011786.01	MsG0580027018.01	0.809298	2.027709e-50	1.186107e-47
MsG0380012007.01	MsG0580027018.01	0.812817	3.502225e-51	2.248937e-48
MsG0380012009.01	MsG0580027018.01	0.814608	1.413019e-51	9.524757e-49
MsG0380012085.01	MsG0580027018.01	0.802898	4.509192e-49	2.234904e-46
MsG0380012330.01	MsG0580027018.01	0.810806	9.598791e-51	5.843137e-48
MsG0380013896.01	MsG0580027018.01	0.805427	1.341915e-49	7.097468e-47
MsG0380014239.01	MsG0580027018.01	0.848209	7.089187e-60	1.291247e-56
MsG0380014251.01	MsG0580027018.01	0.825517	4.489989e-54	4.101720e-51
MsG0380014468.01	MsG0580027018.01	0.805271	1.447014e-49	7.622475e-47
MsG0380014894.01	MsG0580027018.01	0.800067	1.714546e-48	7.908679e-46
MsG0480018465.01	MsG0580027018.01	0.801992	6.929811e-49	3.356134e-46
MsG0480018653.01	MsG0580027018.01	0.826598	2.485080e-54	2.340998e-51
MsG0480018883.01	MsG0580027018.01	0.812844	3.454558e-51	2.219955e-48
MsG0480019435.01	MsG0580027018.01	0.809657	1.697594e-50	1.002584e-47
MsG0480020634.01	MsG0580027018.01	0.810437	1.153355e-50	6.951775e-48
MsG0480021274.01	MsG0580027018.01	0.802420	5.658999e-49	2.770913e-46
MsG0480021536.01	MsG0580027018.01	0.808079	3.693997e-50	2.092242e-47
MsG0480021869.01	MsG0580027018.01	0.815259	1.013334e-51	6.951863e-49
MsG0480021925.01	MsG0580027018.01	0.813239	2.830489e-51	1.838300e-48
MsG0480021948.01	MsG0580027018.01	0.801437	9.007388e-49	4.301525e-46
MsG0480022068.01	MsG0580027018.01	0.809706	1.657168e-50	9.799445e-48
MsG0480022259.01	MsG0580027018.01	0.815687	8.135153e-52	5.647511e-49
MsG0480022262.01	MsG0580027018.01	0.812327	4.483567e-51	2.842295e-48
MsG0480022615.01	MsG0580027018.01	-0.821641	3.623534e-53	2.964757e-50
MsG0480022984.01	MsG0580027018.01	0.815757	7.848624e-52	5.459164e-49
MsG0480023251.01	MsG0580027018.01	0.812139	4.928060e-51	3.108178e-48
MsG0480023390.01	MsG0580027018.01	0.802622	5.142063e-49	2.530626e-46
MsG0580024038.01	MsG0580027018.01	0.804470	2.127266e-49	1.097706e-46
MsG0580024363.01	MsG0580027018.01	-0.822285	2.570684e-53	2.142408e-50
MsG0580024552.01	MsG0580027018.01	0.821546	3.812232e-53	3.110915e-50
MsG0580025022.01	MsG0580027018.01	0.811098	8.297872e-51	5.090571e-48
MsG0580025207.01	MsG0580027018.01	0.807330	5.329164e-50	2.959975e-47
MsG0580025832.01	MsG0580027018.01	0.818157	2.269374e-52	1.685567e-49
MsG0380015034.01	MsG0580027018.01	0.801419	9.085052e-49	4.336600e-46
MsG0380015566.01	MsG0580027018.01	0.816997	4.142601e-52	2.980898e-49
MsG0380015720.01	MsG0580027018.01	0.832931	7.130665e-56	8.088078e-53
MsG0380016064.01	MsG0580027018.01	0.814404	1.567774e-51	1.051034e-48
MsG0380016285.01	MsG0580027018.01	0.813188	2.904491e-51	1.883785e-48
MsG0380016475.01	MsG0580027018.01	0.800187	1.621442e-48	7.501750e-46
MsG0380016910.01	MsG0580027018.01	0.816065	6.700929e-52	4.700166e-49
MsG0380017220.01	MsG0580027018.01	0.807718	4.408602e-50	2.473474e-47
MsG0380017326.01	MsG0580027018.01	0.810711	1.006447e-50	6.111226e-48
MsG0380017461.01	MsG0580027018.01	0.806249	9.017647e-50	4.871134e-47
MsG0380017592.01	MsG0580027018.01	0.801173	1.020333e-48	4.840267e-46
MsG0480018163.01	MsG0580027018.01	0.806889	6.607232e-50	3.627970e-47
MsG0480018183.01	MsG0580027018.01	0.835887	1.291341e-56	1.600516e-53
MsG0480018236.01	MsG0580027018.01	0.841152	5.649939e-58	8.227745e-55
MsG0580026188.01	MsG0580027018.01	0.800424	1.450556e-48	6.752089e-46
MsG0580027018.01	MsG0580027833.01	0.830071	3.610532e-55	3.763539e-52
MsG0580027018.01	MsG0580027922.01	0.817273	3.592083e-52	2.604018e-49
MsG0580027018.01	MsG0580027947.01	0.800685	1.283175e-48	6.012326e-46
MsG0580027018.01	MsG0580028169.01	0.814575	1.436834e-51	9.676892e-49
MsG0580027018.01	MsG0580028170.01	0.801019	1.096893e-48	5.183639e-46
MsG0580027018.01	MsG0580028990.01	0.810604	1.061189e-50	6.425208e-48
MsG0580027018.01	MsG0580030050.01	0.811867	5.647575e-51	3.535706e-48
MsG0580027018.01	MsG0680030880.01	0.808485	3.027089e-50	1.732958e-47
MsG0580027018.01	MsG0680030882.01	0.822283	2.574062e-53	2.145052e-50
MsG0580027018.01	MsG0680031379.01	0.809044	2.298470e-50	1.335366e-47
MsG0580027018.01	MsG0680032157.01	0.819486	1.132459e-52	8.726655e-50
MsG0580027018.01	MsG0680032158.01	0.820132	8.062920e-53	6.326502e-50
MsG0580027018.01	MsG0680032204.01	0.804633	1.966738e-49	1.019150e-46
MsG0580027018.01	MsG0680032355.01	0.803472	3.429743e-49	1.725032e-46
MsG0580027018.01	MsG0680032801.01	0.812514	4.080801e-51	2.599911e-48
MsG0580027018.01	MsG0680033038.01	0.801887	7.283797e-49	3.518368e-46
MsG0580027018.01	MsG0680033412.01	0.802238	6.166979e-49	3.005575e-46
MsG0580027018.01	MsG0680034422.01	0.803872	2.833080e-49	1.439729e-46
MsG0580027018.01	MsG0680034464.01	0.830859	2.315543e-55	2.470038e-52
MsG0580027018.01	MsG0680035444.01	0.822177	2.723823e-53	2.262758e-50
MsG0580027018.01	MsG0780036080.01	0.813781	2.151150e-51	1.417892e-48
MsG0580027018.01	MsG0780036201.01	0.814059	1.867808e-51	1.240478e-48
MsG0580027018.01	MsG0780037047.01	0.816074	6.669354e-52	4.679225e-49
MsG0580027018.01	MsG0780037054.01	0.816710	4.807232e-52	3.431601e-49
MsG0580027018.01	MsG0780037457.01	0.817013	4.110502e-52	2.958978e-49
MsG0580027018.01	MsG0780037592.01	0.816400	5.638227e-52	3.991077e-49
MsG0580027018.01	MsG0780037845.01	0.801083	1.064136e-48	5.036924e-46
MsG0580027018.01	MsG0780038439.01	0.812232	4.701424e-51	2.972805e-48
MsG0580027018.01	MsG0780039178.01	0.800271	1.558424e-48	7.225822e-46
MsG0580027018.01	MsG0780039631.01	0.803355	3.626898e-49	1.818636e-46
MsG0580027018.01	MsG0780039867.01	-0.827812	1.272380e-54	1.241690e-51
MsG0580027018.01	MsG0780040074.01	0.805566	1.254593e-49	6.659241e-47
MsG0580027018.01	MsG0780040576.01	-0.828992	6.605571e-55	6.671850e-52
MsG0580027018.01	MsG0780040596.01	0.825510	4.506042e-54	4.115473e-51
MsG0580027018.01	MsG0780040704.01	0.806386	8.435657e-50	4.572426e-47
MsG0580027018.01	MsG0880041836.01	0.815913	7.246335e-52	5.061153e-49
MsG0580027018.01	MsG0880042161.01	0.822532	2.252270e-53	1.890315e-50
MsG0580027018.01	MsG0880042454.01	0.805348	1.393833e-49	7.357138e-47
MsG0580027018.01	MsG0880042966.01	0.813665	2.281948e-51	1.499437e-48
MsG0580027018.01	MsG0880043812.01	0.813161	2.944945e-51	1.908560e-48
MsG0580027018.01	MsG0880043941.01	0.824947	6.123292e-54	5.504105e-51
MsG0580027018.01	MsG0880044574.01	0.828001	1.145457e-54	1.124196e-51
MsG0580027018.01	MsG0880045117.01	0.807882	4.067447e-50	2.291760e-47
MsG0580027018.01	MsG0880045371.01	0.818347	2.055873e-52	1.535117e-49
MsG0280006491.01	MsG0580027018.01	0.805169	1.519693e-49	7.984683e-47
MsG0280006770.01	MsG0580027018.01	0.801303	9.596610e-49	4.567436e-46
MsG0280007955.01	MsG0580027018.01	0.821898	3.159839e-53	2.604438e-50
MsG0280008112.01	MsG0580027018.01	0.803649	3.151954e-49	1.592501e-46
MsG0280008894.01	MsG0580027018.01	0.815933	7.171252e-52	5.011656e-49
MsG0280010443.01	MsG0580027018.01	0.827545	1.474262e-54	1.427661e-51

PPI

Gene1	Gene2	Type
MsG0580027018.01	MsG0180002677.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027018.01.T01	MTR_5g058150	89.655	203	20	1	1	202	1	203	1.27e-121	345
MsG0580027018.01.T01	MTR_6g075250	68.812	202	61	2	1	201	1	201	3.03e-87	258

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027018.01.T01	AT1G12650	54.839	155	67	2	51	202	48	202	4.27e-44	147
MsG0580027018.01.T01	AT1G12650	54.839	155	67	2	51	202	48	202	4.27e-44	147
MsG0580027018.01.T01	AT1G12650	54.839	155	67	2	51	202	48	202	4.27e-44	147
MsG0580027018.01.T01	AT1G12650	54.839	155	67	2	51	202	48	202	4.27e-44	147

Find 37 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTACATTTCTTGAGATAAA+AGG	0.178545	5:-51263712	None:intergenic
ACAATTAATCTGACCTTCTT+AGG	0.222334	5:-51261718	None:intergenic
GAATATTGAGACACAGATTT+TGG	0.225799	5:+51263641	MsG0580027018.01.T01:CDS
TGGGTTTCATCGGTTGAATT+TGG	0.277771	5:-51260387	None:intergenic
TGGCATAACAGGCTCTTAAA+AGG	0.329338	5:+51263438	MsG0580027018.01.T01:intron
GGGTTTCATCGGTTGAATTT+GGG	0.335327	5:-51260386	None:intergenic
TTGAACTTCTTATCTTCTGC+AGG	0.399522	5:-51260670	None:intergenic
CCACGATTTGAGTCTCTTTG+CGG	0.402540	5:+51262163	MsG0580027018.01.T01:CDS
TGCGGTACATTTGACAATGA+TGG	0.407412	5:+51262181	MsG0580027018.01.T01:CDS
TTCTTGCTACTAGCTTCCAT+TGG	0.435250	5:-51261661	None:intergenic
TTACATTTCTTGAGATAAAA+GGG	0.436036	5:-51263711	None:intergenic
GATGATTGTAGGAGGAGGAG+AGG	0.437945	5:+51260565	MsG0580027018.01.T01:intron
TCTATTTCACTTCTACGCTC+TGG	0.442608	5:-51263482	None:intergenic
CTCCTCGTAGTGGGTTTCAT+CGG	0.452674	5:-51260397	None:intergenic
CAGAAGATAAGAAGTTCAAA+AGG	0.452716	5:+51260674	MsG0580027018.01.T01:CDS
GGGAGATAAAATTATGTTGA+AGG	0.457156	5:-51263744	None:intergenic
TCAAAAGGGCTAATAAGAAT+AGG	0.466092	5:+51260689	MsG0580027018.01.T01:CDS
GCGGTACATTTGACAATGAT+GGG	0.485185	5:+51262182	MsG0580027018.01.T01:CDS
TGCAGAAAGCTCGATCGAAT+GGG	0.490365	5:+51260626	MsG0580027018.01.T01:CDS
TGATCTTCCTGCTGAAAGAC+AGG	0.502469	5:+51263337	MsG0580027018.01.T01:CDS
ACGTCTCTAAAAGCAGGAAC+TGG	0.506037	5:-51261685	None:intergenic
TTACCTACCTGTCTTTCAGC+AGG	0.507162	5:-51263344	None:intergenic
TTGCAGAAAGCTCGATCGAA+TGG	0.510344	5:+51260625	MsG0580027018.01.T01:CDS
GAGAGAGAAGCAGCAAAGCA+AGG	0.511269	5:+51263681	MsG0580027018.01.T01:CDS
AGTTTCATTCTCCTCGTAGT+GGG	0.519416	5:-51260406	None:intergenic
CAGTTTCATTCTCCTCGTAG+TGG	0.524074	5:-51260407	None:intergenic
CGTCGTTCAAGCTCCTAAGA+AGG	0.569172	5:+51261705	MsG0580027018.01.T01:CDS
AGAAGATAAGAAGTTCAAAA+GGG	0.570488	5:+51260675	MsG0580027018.01.T01:CDS
TACTTACATCTCTGATGAGG+AGG	0.581845	5:-51260448	None:intergenic
TGAACGACGTCTCTAAAAGC+AGG	0.592618	5:-51261691	None:intergenic
AAATAGAAGAGTACATAGCA+TGG	0.598427	5:+51263498	MsG0580027018.01.T01:CDS
AATAGAAGAGTACATAGCAT+GGG	0.631081	5:+51263499	MsG0580027018.01.T01:CDS
CCGCAAAGAGACTCAAATCG+TGG	0.650639	5:-51262163	None:intergenic
AGTTACTTACATCTCTGATG+AGG	0.651671	5:-51260451	None:intergenic
GCAGAAAGCTCGATCGAATG+GGG	0.652093	5:+51260627	MsG0580027018.01.T01:CDS
TTTCTCAAAATGAACAAACA+CGG	0.687082	5:+51260354	None:intergenic
AACCGATGAAACCCACTACG+AGG	0.717095	5:+51260395	MsG0580027018.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CAAATAATTATATATTACTA+AGG	-	Chr5:51261569-51261588	None:intergenic	10.0%
!!	AATCTATTAGATAATATTGA+AGG	+	Chr5:51262648-51262667	MsG0580027018.01.T01:intron	15.0%
!!	TATTATTGTATTTGTAACTT+AGG	+	Chr5:51260712-51260731	MsG0580027018.01.T01:intron	15.0%
!!	TCATTAAACTTATGAAAATA+GGG	+	Chr5:51260860-51260879	MsG0580027018.01.T01:intron	15.0%
!!!	ATTTTAATTTTGATGATTGT+AGG	+	Chr5:51260554-51260573	MsG0580027018.01.T01:intron	15.0%
!!!	TTTTCATAAGTTATCTAATA+TGG	+	Chr5:51261211-51261230	MsG0580027018.01.T01:intron	15.0%
!!	AAAAAGAATAATCAATGACA+GGG	-	Chr5:51262576-51262595	None:intergenic	20.0%
!!	AATTGTGCTGAATTTAAATA+TGG	+	Chr5:51262060-51262079	MsG0580027018.01.T01:intron	20.0%
!!	ATGGAAAAGATAATCAAAAT+CGG	-	Chr5:51262801-51262820	None:intergenic	20.0%
!!	CTCATTAAACTTATGAAAAT+AGG	+	Chr5:51260859-51260878	MsG0580027018.01.T01:intron	20.0%
!!	TTAAAATTTGACAATCCAAA+TGG	-	Chr5:51260972-51260991	None:intergenic	20.0%
!!	TTACATTTCTTGAGATAAAA+GGG	-	Chr5:51263714-51263733	None:intergenic	20.0%
!!!	AAAAAATGTCTGAGTTTTAA+GGG	+	Chr5:51262018-51262037	MsG0580027018.01.T01:intron	20.0%
!!!	ACTTATTTGAGTTTATTTAC+TGG	+	Chr5:51260895-51260914	MsG0580027018.01.T01:intron	20.0%
!!!	GATATTTTCTGTTATATATC+TGG	+	Chr5:51262087-51262106	MsG0580027018.01.T01:intron	20.0%
!!!	TAAAAAATGTCTGAGTTTTA+AGG	+	Chr5:51262017-51262036	MsG0580027018.01.T01:intron	20.0%
!!!	TACTTATTTCTAGATTGTAA+TGG	+	Chr5:51263145-51263164	MsG0580027018.01.T01:intron	20.0%
!!!	TGTTGTTTTAACATTTTCTA+AGG	-	Chr5:51262537-51262556	None:intergenic	20.0%
!!!	TTAGCTTATTTTTTAGCTTA+TGG	-	Chr5:51261146-51261165	None:intergenic	20.0%
!!!	TTTTTATTTTAACTTAGAGC+TGG	+	Chr5:51262375-51262394	MsG0580027018.01.T01:intron	20.0%
!	AAAAATAAGCTAATCCAAAC+AGG	+	Chr5:51261153-51261172	MsG0580027018.01.T01:intron	25.0%
!	AACTTATGAAAACAGCTTAT+GGG	+	Chr5:51260945-51260964	MsG0580027018.01.T01:intron	25.0%
!	AATATTAATTTCCAACCCAA+TGG	-	Chr5:51263062-51263081	None:intergenic	25.0%
!	ACTAATAAAACTTACACCAT+TGG	-	Chr5:51263562-51263581	None:intergenic	25.0%
!	AGAAGATAAGAAGTTCAAAA+GGG	+	Chr5:51260675-51260694	MsG0580027018.01.T01:CDS	25.0%
!	AGATAGTTCCATATAATTCT+TGG	+	Chr5:51263005-51263024	MsG0580027018.01.T01:intron	25.0%
!	CTAAGGATTAATTTCAATCT+TGG	-	Chr5:51262520-51262539	None:intergenic	25.0%
!	CTTACATTTCTTGAGATAAA+AGG	-	Chr5:51263715-51263734	None:intergenic	25.0%
!	GAAAAAGAATAATCAATGAC+AGG	-	Chr5:51262577-51262596	None:intergenic	25.0%
!	GAATGCAAATTAATTTCTTC+TGG	+	Chr5:51262455-51262474	MsG0580027018.01.T01:intron	25.0%
!	TAATTTCAATCTTGGACTAT+GGG	-	Chr5:51262512-51262531	None:intergenic	25.0%
!	TACAACCTGAAAAATAATGA+AGG	-	Chr5:51262137-51262156	None:intergenic	25.0%
!	TGTAGAAACCAAGAATTATA+TGG	-	Chr5:51263016-51263035	None:intergenic	25.0%
!	TTAATTTCAATCTTGGACTA+TGG	-	Chr5:51262513-51262532	None:intergenic	25.0%
!	TTCAAATGATACAATAGTCA+AGG	-	Chr5:51262852-51262871	None:intergenic	25.0%
!!	AAAACCTTCTTTATTTGCAT+AGG	+	Chr5:51261113-51261132	MsG0580027018.01.T01:intron	25.0%
!!	AAAGTTTAAGCATTTTCGTA+CGG	+	Chr5:51262300-51262319	MsG0580027018.01.T01:intron	25.0%
!!	AATAAGCTAAAAAACGCTTT+TGG	-	Chr5:51261193-51261212	None:intergenic	25.0%
!!	AATGATTCCCAATTTTTACT+AGG	+	Chr5:51261638-51261657	MsG0580027018.01.T01:intron	25.0%
!!	ACTAATTTTACATACGATAG+TGG	-	Chr5:51261987-51262006	None:intergenic	25.0%
!!	TCATATGTTTTCAGATTGTT+TGG	-	Chr5:51261455-51261474	None:intergenic	25.0%
!!!	ATTAGCTTGCATAGTTTTTT+GGG	+	Chr5:51261842-51261861	MsG0580027018.01.T01:intron	25.0%
!!!	CAAGTGTTTTTAACTTAATC+TGG	+	Chr5:51263215-51263234	MsG0580027018.01.T01:intron	25.0%
!!!	GAAATTAATTTGCATTCTTC+TGG	-	Chr5:51262452-51262471	None:intergenic	25.0%
!!!	TTAATTTTGATGATTGTAGG+AGG	+	Chr5:51260557-51260576	MsG0580027018.01.T01:intron	25.0%
	AAAAGATAATCAAAATCGGC+AGG	-	Chr5:51262797-51262816	None:intergenic	30.0%
	AAAATCTACTAAAACGCCAA+TGG	-	Chr5:51263122-51263141	None:intergenic	30.0%
	AAATGACCACATCAAGAAAA+AGG	-	Chr5:51262240-51262259	None:intergenic	30.0%
	ACAATTAATCTGACCTTCTT+AGG	-	Chr5:51261721-51261740	None:intergenic	30.0%
	ACACATTTCCTGTTAAACAA+GGG	+	Chr5:51261878-51261897	MsG0580027018.01.T01:intron	30.0%
	ACAGTATTTCGTAAATACAG+TGG	-	Chr5:51262717-51262736	None:intergenic	30.0%
	AGACTGTTTGTGAAAAACAA+TGG	-	Chr5:51261488-51261507	None:intergenic	30.0%
	ATAAAACTTACACCATTGGA+CGG	-	Chr5:51263558-51263577	None:intergenic	30.0%
	ATAAGCTATTGCTATAGCAA+AGG	-	Chr5:51261288-51261307	None:intergenic	30.0%
	ATAGCCTATGCAAATAAAGA+AGG	-	Chr5:51261120-51261139	None:intergenic	30.0%
	ATGATACAATAGTCAAGGAA+AGG	-	Chr5:51262847-51262866	None:intergenic	30.0%
	ATTAGCAACTTATAGTACCA+GGG	+	Chr5:51260756-51260775	MsG0580027018.01.T01:intron	30.0%
	ATTTCGTAAATACAGTGGAT+TGG	-	Chr5:51262712-51262731	None:intergenic	30.0%
	CAAAAAACTATGCAAGCTAA+TGG	-	Chr5:51261843-51261862	None:intergenic	30.0%
	CACACAAGGATAAGAATTAA+AGG	-	Chr5:51261609-51261628	None:intergenic	30.0%
	CAGAAGATAAGAAGTTCAAA+AGG	+	Chr5:51260674-51260693	MsG0580027018.01.T01:CDS	30.0%
	GAACTTATGAAAACAGCTTA+TGG	+	Chr5:51260944-51260963	MsG0580027018.01.T01:intron	30.0%
	GCTAATGGCATTCATAAATA+AGG	-	Chr5:51261828-51261847	None:intergenic	30.0%
	GTAAAGAATAGTACATGAGT+CGG	-	Chr5:51262618-51262637	None:intergenic	30.0%
	TAAAGAATAGTACATGAGTC+GGG	-	Chr5:51262617-51262636	None:intergenic	30.0%
	TAATTATTTGTTTGACAGCG+TGG	+	Chr5:51261579-51261598	MsG0580027018.01.T01:intron	30.0%
	TAGAGAAAACAATAGGCAAT+TGG	-	Chr5:51261923-51261942	None:intergenic	30.0%
	TATTAGCAACTTATAGTACC+AGG	+	Chr5:51260755-51260774	MsG0580027018.01.T01:intron	30.0%
	TCAAAAGGGCTAATAAGAAT+AGG	+	Chr5:51260689-51260708	MsG0580027018.01.T01:CDS	30.0%
	TTATGACTTTCATCTCATGA+CGG	+	Chr5:51263408-51263427	MsG0580027018.01.T01:intron	30.0%
!	AAATAGAAGAGTACATAGCA+TGG	+	Chr5:51263498-51263517	MsG0580027018.01.T01:CDS	30.0%
!	AATAGAAGAGTACATAGCAT+GGG	+	Chr5:51263499-51263518	MsG0580027018.01.T01:CDS	30.0%
!	GAATATTGAGACACAGATTT+TGG	+	Chr5:51263641-51263660	MsG0580027018.01.T01:CDS	30.0%
!	TCACATTTACATGTCTTTTC+AGG	+	Chr5:51263590-51263609	MsG0580027018.01.T01:intron	30.0%
!	TTTGTAACTTAGGCATTGTT+TGG	+	Chr5:51260722-51260741	MsG0580027018.01.T01:intron	30.0%
!!	ACGCTTTTGGAAATTTTCAT+AGG	-	Chr5:51261180-51261199	None:intergenic	30.0%
!!	ATAAGTTTTGTGAGACTGTT+TGG	+	Chr5:51260919-51260938	MsG0580027018.01.T01:intron	30.0%
!!	CGCTTTTGGAAATTTTCATA+GGG	-	Chr5:51261179-51261198	None:intergenic	30.0%
!!	TAAGTTTTGTGAGACTGTTT+GGG	+	Chr5:51260920-51260939	MsG0580027018.01.T01:intron	30.0%
!!	TCATTTTATTTGTGCACACA+AGG	-	Chr5:51261623-51261642	None:intergenic	30.0%
!!!	CATTAGCTTGCATAGTTTTT+TGG	+	Chr5:51261841-51261860	MsG0580027018.01.T01:intron	30.0%
!!!	TTAGCTTGCATAGTTTTTTG+GGG	+	Chr5:51261843-51261862	MsG0580027018.01.T01:intron	30.0%
	AATAGCTTATACATAAGCCC+TGG	-	Chr5:51260776-51260795	None:intergenic	35.0%
	ACACACGTAGAGAAAACAAT+AGG	-	Chr5:51261930-51261949	None:intergenic	35.0%
	AGTTACTTACATCTCTGATG+AGG	-	Chr5:51260454-51260473	None:intergenic	35.0%
	CATGTATTATCAGTGCTACA+CGG	-	Chr5:51263269-51263288	None:intergenic	35.0%
	CTGGAAGTCTTTCTTACTAT+GGG	+	Chr5:51262474-51262493	MsG0580027018.01.T01:intron	35.0%
	CTTATGAAAATAGGGTCTGT+TGG	+	Chr5:51260868-51260887	MsG0580027018.01.T01:intron	35.0%
	GACACATTTCCTGTTAAACA+AGG	+	Chr5:51261877-51261896	MsG0580027018.01.T01:intron	35.0%
	GCATTAGATATCCTCTGTTT+GGG	+	Chr5:51262970-51262989	MsG0580027018.01.T01:intron	35.0%
	TAAAACTTACACCATTGGAC+GGG	-	Chr5:51263557-51263576	None:intergenic	35.0%
	TAGCAATAATACCCAAACAG+AGG	-	Chr5:51262984-51263003	None:intergenic	35.0%
	TCATATGTAGTTAAGACTCC+AGG	+	Chr5:51261960-51261979	MsG0580027018.01.T01:intron	35.0%
	TCGTTTATGTGGATACCATT+GGG	+	Chr5:51263044-51263063	MsG0580027018.01.T01:intron	35.0%
	TCTGGAAGTCTTTCTTACTA+TGG	+	Chr5:51262473-51262492	MsG0580027018.01.T01:intron	35.0%
	TGGAAGTCTTTCTTACTATG+GGG	+	Chr5:51262475-51262494	MsG0580027018.01.T01:intron	35.0%
	TTATTTGCAGCTTATAGCAC+AGG	-	Chr5:51261361-51261380	None:intergenic	35.0%
	TTGAACTTCTTATCTTCTGC+AGG	-	Chr5:51260673-51260692	None:intergenic	35.0%
!	AAATTTTCATAGGGCCTGTT+TGG	-	Chr5:51261170-51261189	None:intergenic	35.0%
!	CCATTGGCCTAGTAAAAATT+GGG	-	Chr5:51261648-51261667	None:intergenic	35.0%
!	GCACTGATAATACATGTACT+TGG	+	Chr5:51263273-51263292	MsG0580027018.01.T01:intron	35.0%
!	GTTCTACCTTTTTCTTGATG+TGG	+	Chr5:51262231-51262250	MsG0580027018.01.T01:intron	35.0%
!	TCCATTGGCCTAGTAAAAAT+TGG	-	Chr5:51261649-51261668	None:intergenic	35.0%
!!	ATTTTGATGATTGTAGGAGG+AGG	+	Chr5:51260560-51260579	MsG0580027018.01.T01:intron	35.0%
!!	GCATGCCTTCATTATTTTTC+AGG	+	Chr5:51262129-51262148	MsG0580027018.01.T01:intron	35.0%
!!!	TAGCTTGCATAGTTTTTTGG+GGG	+	Chr5:51261844-51261863	MsG0580027018.01.T01:intron	35.0%
	AAAACTTACACCATTGGACG+GGG	-	Chr5:51263556-51263575	None:intergenic	40.0%
	AAACAGCACAAGATATCAGC+AGG	-	Chr5:51261772-51261791	None:intergenic	40.0%
	AAACAGCTTATGGGTCCATT+TGG	+	Chr5:51260954-51260973	MsG0580027018.01.T01:intron	40.0%
	AACAGCACAAGATATCAGCA+GGG	-	Chr5:51261771-51261790	None:intergenic	40.0%
	AGTTTCATTCTCCTCGTAGT+GGG	-	Chr5:51260409-51260428	None:intergenic	40.0%
	ATACATGTACTTGGACTTGC+AGG	+	Chr5:51263282-51263301	MsG0580027018.01.T01:intron	40.0%
	CAAGCATATTGCTTAGTGAG+TGG	+	Chr5:51262948-51262967	MsG0580027018.01.T01:intron	40.0%
	CTTATGTGAGCTTACACATG+CGG	+	Chr5:51261303-51261322	MsG0580027018.01.T01:intron	40.0%
	GCGGTACATTTGACAATGAT+GGG	+	Chr5:51262182-51262201	MsG0580027018.01.T01:CDS	40.0%
	GGAAGAATGTGTTGAAGTTG+TGG	+	Chr5:51262426-51262445	MsG0580027018.01.T01:intron	40.0%
	GGCATTAGATATCCTCTGTT+TGG	+	Chr5:51262969-51262988	MsG0580027018.01.T01:intron	40.0%
	GTCGTTTATGTGGATACCAT+TGG	+	Chr5:51263043-51263062	MsG0580027018.01.T01:intron	40.0%
	TACTTACATCTCTGATGAGG+AGG	-	Chr5:51260451-51260470	None:intergenic	40.0%
	TCTATTTCACTTCTACGCTC+TGG	-	Chr5:51263485-51263504	None:intergenic	40.0%
	TGCGGTACATTTGACAATGA+TGG	+	Chr5:51262181-51262200	MsG0580027018.01.T01:CDS	40.0%
	TGCTACACGGTTCTCATAAT+AGG	-	Chr5:51263256-51263275	None:intergenic	40.0%
	TGGCATAACAGGCTCTTAAA+AGG	+	Chr5:51263438-51263457	MsG0580027018.01.T01:intron	40.0%
	TGGTATCCACATAAACGACA+CGG	-	Chr5:51263042-51263061	None:intergenic	40.0%
	TGTCCTGAAGAAGTCAACAT+AGG	+	Chr5:51262405-51262424	MsG0580027018.01.T01:intron	40.0%
	TTATGTGGATACCATTGGGT+TGG	+	Chr5:51263048-51263067	MsG0580027018.01.T01:intron	40.0%
!	CCCAATTTTTACTAGGCCAA+TGG	+	Chr5:51261645-51261664	MsG0580027018.01.T01:intron	40.0%
!	GCTAGCTGATGTAACTTTTG+AGG	+	Chr5:51260600-51260619	MsG0580027018.01.T01:CDS	40.0%
!	GGGTTTCATCGGTTGAATTT+GGG	-	Chr5:51260389-51260408	None:intergenic	40.0%
!	TGGGTTTCATCGGTTGAATT+TGG	-	Chr5:51260390-51260409	None:intergenic	40.0%
!	TTCTTGCTACTAGCTTCCAT+TGG	-	Chr5:51261664-51261683	None:intergenic	40.0%
!!	CTTCCTATGTTGACTTCTTC+AGG	-	Chr5:51262411-51262430	None:intergenic	40.0%
!!	GATAGTTCTAACCAGCTCAT+AGG	+	Chr5:51263095-51263114	MsG0580027018.01.T01:intron	40.0%
!!	TTTACATACGATAGTGGACC+TGG	-	Chr5:51261981-51262000	None:intergenic	40.0%
	AGAACAACAAACACGTCCAG+AGG	-	Chr5:51262216-51262235	None:intergenic	45.0%
	CAGTTTCATTCTCCTCGTAG+TGG	-	Chr5:51260410-51260429	None:intergenic	45.0%
	CCACGATTTGAGTCTCTTTG+CGG	+	Chr5:51262163-51262182	MsG0580027018.01.T01:CDS	45.0%
	TAACCAGCTCATAGGTCCAT+TGG	+	Chr5:51263103-51263122	MsG0580027018.01.T01:intron	45.0%
	TCCTGTTAAACAAGGGCTCA+TGG	+	Chr5:51261885-51261904	MsG0580027018.01.T01:intron	45.0%
	TGATCTTCCTGCTGAAAGAC+AGG	+	Chr5:51263337-51263356	MsG0580027018.01.T01:CDS	45.0%
	TGCAGAAAGCTCGATCGAAT+GGG	+	Chr5:51260626-51260645	MsG0580027018.01.T01:CDS	45.0%
	TTAAACAAGGGCTCATGGAG+AGG	+	Chr5:51261890-51261909	MsG0580027018.01.T01:intron	45.0%
	TTACCTACCTGTCTTTCAGC+AGG	-	Chr5:51263347-51263366	None:intergenic	45.0%
	TTGCAGAAAGCTCGATCGAA+TGG	+	Chr5:51260625-51260644	MsG0580027018.01.T01:CDS	45.0%
!	ACGTCTCTAAAAGCAGGAAC+TGG	-	Chr5:51261688-51261707	None:intergenic	45.0%
!	CAATAGTCAAGGAAAGGCAC+CGG	-	Chr5:51262841-51262860	None:intergenic	45.0%
!	CGGCAGGATTTGTTTCAGTA+TGG	-	Chr5:51262781-51262800	None:intergenic	45.0%
!	TCCATGAGCCCTTGTTTAAC+AGG	-	Chr5:51261889-51261908	None:intergenic	45.0%
!	TGAACGACGTCTCTAAAAGC+AGG	-	Chr5:51261694-51261713	None:intergenic	45.0%
!!	AATAGTCAAGGAAAGGCACC+GGG	-	Chr5:51262840-51262859	None:intergenic	45.0%
!!	ACAATGCCGTGTCGTTTATG+TGG	+	Chr5:51263033-51263052	MsG0580027018.01.T01:intron	45.0%
!!	ATGATGGGTATGTTCACCTC+TGG	+	Chr5:51262197-51262216	MsG0580027018.01.T01:intron	45.0%
!!!	ATTTTAGAGCATGTCCTGCC+CGG	+	Chr5:51262819-51262838	MsG0580027018.01.T01:intron	45.0%
!!	AAATAATTATATATTACTAA+GGG	-	Chr5:51261568-51261587	None:intergenic	5.0%
!!	TTTAATATAAATATTAACTT+AGG	+	Chr5:51260501-51260520	MsG0580027018.01.T01:intron	5.0%
	AACCGATGAAACCCACTACG+AGG	+	Chr5:51260395-51260414	MsG0580027018.01.T01:CDS	50.0%
	ACGGCATCTTCTGGCATAAC+AGG	+	Chr5:51263427-51263446	MsG0580027018.01.T01:intron	50.0%
	AGTTTGTCTTCCCCGTCCAA+TGG	+	Chr5:51263543-51263562	MsG0580027018.01.T01:intron	50.0%
	ATCAGCAGGGCAGAGATCAT+TGG	-	Chr5:51261758-51261777	None:intergenic	50.0%
	CATCTCATGACGGCATCTTC+TGG	+	Chr5:51263418-51263437	MsG0580027018.01.T01:intron	50.0%
	CCGCAAAGAGACTCAAATCG+TGG	-	Chr5:51262166-51262185	None:intergenic	50.0%
	CGTCGTTCAAGCTCCTAAGA+AGG	+	Chr5:51261705-51261724	MsG0580027018.01.T01:CDS	50.0%
	CTTCCTGCTGAAAGACAGGT+AGG	+	Chr5:51263341-51263360	MsG0580027018.01.T01:intron	50.0%
	GAGAGAGAAGCAGCAAAGCA+AGG	+	Chr5:51263681-51263700	MsG0580027018.01.T01:CDS	50.0%
	GATGATTGTAGGAGGAGGAG+AGG	+	Chr5:51260565-51260584	MsG0580027018.01.T01:intron	50.0%
	GCAGAAAGCTCGATCGAATG+GGG	+	Chr5:51260627-51260646	MsG0580027018.01.T01:CDS	50.0%
!!	CTCCTCGTAGTGGGTTTCAT+CGG	-	Chr5:51260400-51260419	None:intergenic	50.0%
!!	GGGCAGGACATGCTCTAAAA+TGG	-	Chr5:51262820-51262839	None:intergenic	50.0%
	AACAAGGGCTCATGGAGAGG+AGG	+	Chr5:51261893-51261912	MsG0580027018.01.T01:intron	55.0%
	ACGCCAATGGACCTATGAGC+TGG	-	Chr5:51263109-51263128	None:intergenic	55.0%
	GCTTGCGCACGCAAACGCAA+TGG	-	Chr5:51262933-51262952	None:intergenic	60.0%
!!	GTCAAGGAAAGGCACCGGGC+AGG	-	Chr5:51262836-51262855	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	51260363	51263755	51260363	ID=MsG0580027018.01;Name=MsG0580027018.01
Chr5	mRNA	51260363	51263755	51260363	ID=MsG0580027018.01.T01;Parent=MsG0580027018.01;Name=MsG0580027018.01.T01;_AED=0.25;_eAED=0.26;_QI=0\|0\|0\|1\|1\|1\|7\|0\|209
Chr5	exon	51260363	51260463	51260363	ID=MsG0580027018.01.T01:exon:28919;Parent=MsG0580027018.01.T01
Chr5	exon	51260576	51260710	51260576	ID=MsG0580027018.01.T01:exon:28920;Parent=MsG0580027018.01.T01
Chr5	exon	51261660	51261726	51261660	ID=MsG0580027018.01.T01:exon:28921;Parent=MsG0580027018.01.T01
Chr5	exon	51262151	51262203	51262151	ID=MsG0580027018.01.T01:exon:28922;Parent=MsG0580027018.01.T01
Chr5	exon	51263304	51263358	51263304	ID=MsG0580027018.01.T01:exon:28923;Parent=MsG0580027018.01.T01
Chr5	exon	51263449	51263523	51263449	ID=MsG0580027018.01.T01:exon:28924;Parent=MsG0580027018.01.T01
Chr5	exon	51263612	51263755	51263612	ID=MsG0580027018.01.T01:exon:28925;Parent=MsG0580027018.01.T01
Chr5	CDS	51260363	51260463	51260363	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01
Chr5	CDS	51260576	51260710	51260576	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01
Chr5	CDS	51261660	51261726	51261660	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01
Chr5	CDS	51262151	51262203	51262151	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01
Chr5	CDS	51263304	51263358	51263304	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01
Chr5	CDS	51263449	51263523	51263449	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01
Chr5	CDS	51263612	51263755	51263612	ID=MsG0580027018.01.T01:cds;Parent=MsG0580027018.01.T01

Gene Sequence

>MsG0580027018.01.T01

ATGAACAAACACGGTAGCAGAGTCCCAAATTCAACCGATGAAACCCACTACGAGGAGAATGAAACTGACGAGTCACTTTCTTCTTCCTCCTCATCAGAGATGAGGAGGAGAGGAAGAGATAAAGAGCTAGCTGATGTAACTTTTGAGGAGTTGCAGAAAGCTCGATCGAATGGGGCGCATGCGTTTTTCAAGAAACCTGCAGAAGATAAGAAGTTCAAAAGGGCTAATAAGAATAGGCCAATGGAAGCTAGTAGCAAGAAGCCAGTTCCTGCTTTTAGAGACGTCGTTCAAGCTCCTAAGAAGGTTGTACGTGATCCACGATTTGAGTCTCTTTGCGGTACATTTGACAATGATGGGTTTAAAAAGAGATGTAATTTTTTATATGAAAATGATCTTCCTGCTGAAAGACAGGCTCTTAAAAGGCAATTGAGAAAATATAAAGATCCAGAGCGTAGAAGTGAAATAGAAGAGTACATAGCATGGGTTGATAAACAGTTGAAATCTGATTCAACAAAGAATATTGAGACACAGATTTTGGCTAAGCACAAGAAGAAAGAGAGAGAAGCAGCAAAGCAAGGAAAACGTCCCTTTTATCTCAAGAAATGTAAGTCATCTCTTCCTTCAACATAA

Protein sequence

>MsG0580027018.01.T01

MNKHGSRVPNSTDETHYEENETDESLSSSSSSEMRRRGRDKELADVTFEELQKARSNGAHAFFKKPAEDKKFKRANKNRPMEASSKKPVPAFRDVVQAPKKVVRDPRFESLCGTFDNDGFKKRCNFLYENDLPAERQALKRQLRKYKDPERRSEIEEYIAWVDKQLKSDSTKNIETQILAKHKKKEREAAKQGKRPFYLKKCKSSLPST*