Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0041270 | sp|Q8S9L6|CRK29_ARATH | 36.719 | 256 | 152 | 6 | 13 | 265 | 13 | 261 | 3.24e-41 | 153 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0041270 | Msa0041780 | -0.811211 | 7.843679e-51 | -8.615850e-47 |
Msa0041270 | Msa0088830 | 0.945401 | 3.271673e-104 | -8.615850e-47 |
Msa0041270 | Msa0130710 | 0.817818 | 2.707601e-52 | -8.615850e-47 |
Msa0041270 | Msa0135740 | 0.896289 | 4.255343e-76 | -8.615850e-47 |
Msa0041270 | Msa0180390 | 0.872047 | 4.292924e-67 | -8.615850e-47 |
Msa0041270 | Msa0222070 | -0.801189 | 1.012725e-48 | -8.615850e-47 |
Msa0041270 | Msa0222120 | -0.800146 | 1.652586e-48 | -8.615850e-47 |
Msa0041270 | Msa0266640 | 0.803779 | 2.961983e-49 | -8.615850e-47 |
Msa0041270 | Msa0301460 | -0.800912 | 1.153386e-48 | -8.615850e-47 |
Msa0041270 | Msa0381950 | 0.832205 | 1.079439e-55 | -8.615850e-47 |
Msa0041270 | Msa0421800 | -0.800157 | 1.643832e-48 | -8.615850e-47 |
Msa0041270 | Msa0431380 | 0.805679 | 1.188013e-49 | -8.615850e-47 |
Msa0041270 | Msa0453970 | 0.809817 | 1.568535e-50 | -8.615850e-47 |
Msa0041270 | Msa0456480 | -0.803818 | 2.907415e-49 | -8.615850e-47 |
Msa0041270 | Msa0476420 | 0.846197 | 2.526830e-59 | -8.615850e-47 |
Msa0041270 | Msa0520430 | 0.849043 | 4.165896e-60 | -8.615850e-47 |
Msa0041270 | Msa0533510 | 0.804773 | 1.839002e-49 | -8.615850e-47 |
Msa0041270 | Msa0589750 | 0.808518 | 2.978359e-50 | -8.615850e-47 |
Msa0041270 | Msa0716600 | 0.802758 | 4.819828e-49 | -8.615850e-47 |
Msa0041270 | Msa0793060 | -0.812597 | 3.913423e-51 | -8.615850e-47 |
Msa0041270 | Msa0883610 | 0.807055 | 6.093756e-50 | -8.615850e-47 |
Msa0041270 | Msa0910570 | 0.806841 | 6.761047e-50 | -8.615850e-47 |
Msa0041270 | Msa0951060 | 0.814133 | 1.799139e-51 | -8.615850e-47 |
Msa0041270 | Msa0985250 | 0.834831 | 2.387518e-56 | -8.615850e-47 |
Msa0041270 | Msa0985290 | 0.814960 | 1.180659e-51 | -8.615850e-47 |
Msa0041270 | Msa1046220 | 0.815520 | 8.863321e-52 | -8.615850e-47 |
Msa0041270 | Msa1083100 | 0.817314 | 3.516796e-52 | -8.615850e-47 |
Msa0041270 | Msa1102180 | -0.809562 | 1.779576e-50 | -8.615850e-47 |
Msa0041270 | Msa1138600 | -0.814177 | 1.759495e-51 | -8.615850e-47 |
Msa0041270 | Msa1342400 | -0.810643 | 1.041026e-50 | -8.615850e-47 |
Msa0041270 | Msa1370930 | 0.813798 | 2.132434e-51 | -8.615850e-47 |
Msa0041270 | Msa1413220 | -0.809308 | 2.017192e-50 | -8.615850e-47 |
Msa0041270 | Msa1445780 | 0.811976 | 5.347992e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0041270 | MtrunA17_Chr1g0206601 | 90.943 | 265 | 24 | 0 | 1 | 265 | 22 | 286 | 0.0 | 508 |
Msa0041270 | MtrunA17_Chr1g0206581 | 81.387 | 274 | 41 | 2 | 1 | 265 | 18 | 290 | 1.61e-162 | 452 |
Msa0041270 | MtrunA17_Chr1g0206651 | 72.656 | 256 | 64 | 4 | 1 | 255 | 1 | 251 | 8.20e-134 | 378 |
Msa0041270 | MtrunA17_Chr1g0206571 | 62.343 | 239 | 90 | 0 | 20 | 258 | 23 | 261 | 1.15e-108 | 316 |
Msa0041270 | MtrunA17_Chr1g0154361 | 61.753 | 251 | 91 | 3 | 10 | 255 | 3 | 253 | 7.29e-106 | 309 |
Msa0041270 | MtrunA17_Chr1g0154341 | 56.654 | 263 | 107 | 4 | 10 | 265 | 3 | 265 | 1.26e-100 | 295 |
Msa0041270 | MtrunA17_Chr1g0154371 | 55.769 | 260 | 108 | 4 | 1 | 254 | 8 | 266 | 4.77e-93 | 288 |
Msa0041270 | MtrunA17_Chr1g0154311 | 54.435 | 248 | 109 | 2 | 14 | 258 | 10 | 256 | 6.46e-92 | 285 |
Msa0041270 | MtrunA17_Chr1g0154351 | 55.952 | 252 | 106 | 3 | 10 | 256 | 3 | 254 | 4.53e-91 | 283 |
Msa0041270 | MtrunA17_Chr1g0154321 | 54.902 | 255 | 106 | 5 | 10 | 255 | 3 | 257 | 7.77e-87 | 274 |
Msa0041270 | MtrunA17_Chr1g0206531 | 51.373 | 255 | 112 | 6 | 4 | 256 | 8 | 252 | 1.44e-79 | 253 |
Msa0041270 | MtrunA17_Chr5g0428591 | 49.187 | 246 | 117 | 5 | 10 | 255 | 8 | 245 | 4.63e-73 | 224 |
Msa0041270 | MtrunA17_Chr1g0206461 | 48.235 | 255 | 121 | 5 | 2 | 256 | 6 | 249 | 8.74e-72 | 232 |
Msa0041270 | MtrunA17_Chr5g0428571 | 51.364 | 220 | 103 | 3 | 40 | 259 | 35 | 250 | 4.03e-67 | 217 |
Msa0041270 | MtrunA17_Chr5g0428531 | 46.063 | 254 | 114 | 7 | 10 | 254 | 8 | 247 | 1.72e-65 | 206 |
Msa0041270 | MtrunA17_Chr1g0206451 | 49.219 | 256 | 121 | 5 | 2 | 256 | 40 | 287 | 1.60e-63 | 211 |
Msa0041270 | MtrunA17_Chr1g0206521 | 47.843 | 255 | 123 | 5 | 2 | 256 | 648 | 892 | 8.09e-62 | 210 |
Msa0041270 | MtrunA17_Chr1g0206521 | 47.718 | 241 | 117 | 5 | 16 | 256 | 19 | 250 | 1.11e-59 | 204 |
Msa0041270 | MtrunA17_Chr1g0206561 | 40.873 | 252 | 140 | 4 | 11 | 262 | 4 | 246 | 5.70e-52 | 179 |
Msa0041270 | MtrunA17_Chr5g0426941 | 41.288 | 264 | 134 | 8 | 4 | 262 | 1 | 248 | 4.65e-51 | 177 |
Msa0041270 | MtrunA17_Chr1g0206381 | 37.097 | 248 | 142 | 6 | 24 | 263 | 19 | 260 | 4.28e-44 | 152 |
Msa0041270 | MtrunA17_Chr1g0206401 | 43.256 | 215 | 107 | 8 | 43 | 248 | 33 | 241 | 2.27e-43 | 156 |
Msa0041270 | MtrunA17_Chr2g0323011 | 31.452 | 248 | 158 | 7 | 4 | 248 | 1 | 239 | 2.20e-34 | 124 |
Msa0041270 | MtrunA17_Chr1g0205771 | 33.617 | 235 | 145 | 6 | 24 | 255 | 33 | 259 | 1.75e-32 | 125 |
Msa0041270 | MtrunA17_Chr1g0206331 | 34.562 | 217 | 133 | 7 | 44 | 255 | 41 | 253 | 5.82e-32 | 124 |
Msa0041270 | MtrunA17_Chr5g0428601 | 48.413 | 126 | 62 | 3 | 130 | 255 | 1 | 123 | 2.20e-31 | 119 |
Msa0041270 | MtrunA17_Chr7g0234231 | 29.839 | 248 | 165 | 5 | 9 | 256 | 1 | 239 | 1.64e-30 | 114 |
Msa0041270 | MtrunA17_Chr6g0475001 | 33.730 | 252 | 153 | 8 | 11 | 255 | 7 | 251 | 1.75e-30 | 119 |
Msa0041270 | MtrunA17_Chr6g0475001 | 34.184 | 196 | 113 | 8 | 68 | 254 | 301 | 489 | 8.40e-18 | 82.8 |
Msa0041270 | MtrunA17_Chr6g0475121 | 32.046 | 259 | 162 | 7 | 9 | 261 | 7 | 257 | 6.55e-29 | 114 |
Msa0041270 | MtrunA17_Chr6g0475121 | 28.992 | 238 | 150 | 10 | 21 | 254 | 268 | 490 | 1.33e-18 | 85.1 |
Msa0041270 | MtrunA17_Chr6g0474901 | 31.776 | 214 | 137 | 5 | 47 | 255 | 35 | 244 | 1.55e-28 | 114 |
Msa0041270 | MtrunA17_Chr6g0474901 | 30.864 | 243 | 142 | 11 | 23 | 254 | 256 | 483 | 2.63e-19 | 87.4 |
Msa0041270 | MtrunA17_Chr6g0474971 | 33.178 | 214 | 134 | 5 | 47 | 255 | 35 | 244 | 3.77e-28 | 109 |
Msa0041270 | MtrunA17_Chr5g0394001 | 32.114 | 246 | 155 | 8 | 13 | 254 | 12 | 249 | 4.24e-28 | 112 |
Msa0041270 | MtrunA17_Chr1g0206201 | 32.271 | 251 | 156 | 9 | 4 | 248 | 6 | 248 | 2.87e-27 | 106 |
Msa0041270 | MtrunA17_Chr1g0206361 | 32.735 | 223 | 139 | 7 | 40 | 258 | 42 | 257 | 3.28e-27 | 110 |
Msa0041270 | MtrunA17_Chr8g0347571 | 31.600 | 250 | 153 | 8 | 9 | 254 | 7 | 242 | 1.33e-26 | 108 |
Msa0041270 | MtrunA17_Chr8g0347571 | 27.642 | 246 | 147 | 12 | 23 | 255 | 261 | 488 | 1.80e-17 | 82.0 |
Msa0041270 | MtrunA17_Chr6g0475201 | 30.303 | 264 | 173 | 6 | 1 | 261 | 1 | 256 | 5.33e-26 | 107 |
Msa0041270 | MtrunA17_Chr6g0475201 | 35.714 | 168 | 101 | 6 | 89 | 254 | 328 | 490 | 3.61e-23 | 98.6 |
Msa0041270 | MtrunA17_Chr6g0474811 | 31.203 | 266 | 155 | 10 | 4 | 255 | 1 | 252 | 6.72e-26 | 106 |
Msa0041270 | MtrunA17_Chr6g0474811 | 32.500 | 200 | 122 | 7 | 68 | 259 | 303 | 497 | 5.29e-20 | 89.4 |
Msa0041270 | MtrunA17_Chr6g0475111 | 29.719 | 249 | 166 | 6 | 9 | 254 | 10 | 252 | 1.29e-25 | 105 |
Msa0041270 | MtrunA17_Chr6g0475111 | 30.058 | 173 | 108 | 7 | 89 | 255 | 337 | 502 | 5.58e-17 | 80.5 |
Msa0041270 | MtrunA17_Chr1g0206351 | 29.870 | 231 | 152 | 5 | 28 | 255 | 31 | 254 | 1.59e-25 | 105 |
Msa0041270 | MtrunA17_Chr6g0474871 | 31.076 | 251 | 158 | 8 | 12 | 255 | 7 | 249 | 2.77e-25 | 104 |
Msa0041270 | MtrunA17_Chr6g0474871 | 31.841 | 201 | 122 | 8 | 74 | 264 | 304 | 499 | 6.74e-19 | 86.3 |
Msa0041270 | MtrunA17_Chr2g0322981 | 29.796 | 245 | 154 | 8 | 6 | 248 | 11 | 239 | 7.90e-25 | 99.4 |
Msa0041270 | MtrunA17_Chr5g0394021 | 33.880 | 183 | 116 | 3 | 72 | 254 | 70 | 247 | 1.33e-24 | 102 |
Msa0041270 | MtrunA17_Chr5g0393981 | 31.193 | 218 | 129 | 9 | 45 | 254 | 113 | 317 | 2.19e-24 | 102 |
Msa0041270 | MtrunA17_Chr3g0081001 | 27.341 | 267 | 175 | 6 | 3 | 265 | 5 | 256 | 2.50e-24 | 102 |
Msa0041270 | MtrunA17_Chr1g0206231 | 32.536 | 209 | 131 | 7 | 51 | 255 | 52 | 254 | 8.32e-24 | 100 |
Msa0041270 | MtrunA17_Chr6g0475091 | 31.797 | 217 | 139 | 5 | 44 | 255 | 48 | 260 | 1.94e-23 | 99.4 |
Msa0041270 | MtrunA17_Chr6g0475091 | 33.889 | 180 | 112 | 6 | 82 | 259 | 330 | 504 | 5.32e-18 | 83.6 |
Msa0041270 | MtrunA17_Chr1g0206291 | 30.435 | 253 | 158 | 9 | 11 | 255 | 23 | 265 | 2.13e-23 | 99.0 |
Msa0041270 | MtrunA17_Chr6g0474861 | 32.932 | 249 | 150 | 11 | 11 | 254 | 7 | 243 | 2.30e-23 | 99.0 |
Msa0041270 | MtrunA17_Chr3g0081051 | 32.547 | 212 | 134 | 5 | 41 | 249 | 31 | 236 | 2.90e-23 | 95.5 |
Msa0041270 | MtrunA17_Chr3g0081011 | 28.182 | 220 | 144 | 6 | 50 | 265 | 46 | 255 | 3.37e-23 | 98.6 |
Msa0041270 | MtrunA17_Chr5g0394011 | 31.019 | 216 | 138 | 7 | 45 | 254 | 41 | 251 | 3.77e-23 | 98.6 |
Msa0041270 | MtrunA17_Chr3g0081031 | 31.967 | 244 | 152 | 6 | 9 | 249 | 22 | 254 | 1.41e-22 | 96.7 |
Msa0041270 | MtrunA17_Chr8g0354271 | 27.027 | 259 | 178 | 7 | 9 | 264 | 8 | 258 | 2.12e-21 | 93.2 |
Msa0041270 | MtrunA17_Chr8g0354421 | 30.350 | 257 | 153 | 13 | 9 | 255 | 30 | 270 | 3.55e-20 | 89.7 |
Msa0041270 | MtrunA17_Chr8g0354441 | 27.407 | 270 | 167 | 12 | 9 | 265 | 13 | 266 | 7.36e-20 | 89.0 |
Msa0041270 | MtrunA17_Chr8g0354351 | 26.154 | 260 | 176 | 8 | 9 | 265 | 7 | 253 | 1.56e-19 | 87.8 |
Msa0041270 | MtrunA17_Chr8g0354411 | 27.979 | 193 | 129 | 6 | 75 | 265 | 74 | 258 | 2.58e-18 | 82.8 |
Msa0041270 | MtrunA17_Chr8g0354341 | 31.694 | 183 | 114 | 6 | 75 | 255 | 73 | 246 | 1.77e-17 | 79.7 |
Msa0041270 | MtrunA17_Chr1g0206251 | 34.254 | 181 | 107 | 7 | 82 | 254 | 333 | 509 | 2.36e-17 | 81.3 |
Msa0041270 | MtrunA17_Chr1g0206251 | 27.734 | 256 | 167 | 9 | 11 | 256 | 19 | 266 | 2.29e-13 | 69.7 |
Msa0041270 | MtrunA17_Chr3g0119041 | 29.665 | 209 | 126 | 7 | 68 | 259 | 63 | 267 | 2.92e-17 | 81.3 |
Msa0041270 | MtrunA17_Chr1g0206421 | 30.189 | 159 | 94 | 5 | 71 | 220 | 2 | 152 | 6.59e-17 | 80.1 |
Msa0041270 | MtrunA17_Chr2g0280361 | 27.197 | 239 | 157 | 7 | 25 | 262 | 27 | 249 | 1.83e-16 | 77.0 |
Msa0041270 | MtrunA17_Chr2g0280391 | 25.941 | 239 | 165 | 7 | 25 | 262 | 27 | 254 | 2.09e-16 | 77.0 |
Msa0041270 | MtrunA17_Chr1g0206411 | 53.448 | 58 | 27 | 0 | 65 | 122 | 4 | 61 | 6.38e-15 | 68.6 |
Msa0041270 | MtrunA17_Chr8g0354431 | 23.938 | 259 | 187 | 6 | 9 | 265 | 8 | 258 | 9.53e-13 | 67.8 |
Msa0041270 | MtrunA17_Chr8g0354281 | 22.368 | 228 | 163 | 8 | 32 | 255 | 30 | 247 | 3.75e-12 | 66.2 |
Msa0041270 | MtrunA17_Chr2g0280381 | 25.837 | 209 | 143 | 5 | 55 | 262 | 51 | 248 | 1.36e-11 | 63.2 |
Msa0041270 | MtrunA17_Chr1g0206541 | 45.455 | 55 | 29 | 1 | 208 | 262 | 19 | 72 | 7.41e-11 | 57.8 |
Msa0041270 | MtrunA17_Chr3g0082951 | 33.613 | 119 | 75 | 3 | 22 | 139 | 106 | 221 | 8.07e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0041270 | AT4G21410.2 | 36.719 | 256 | 152 | 6 | 13 | 265 | 13 | 261 | 9.77e-43 | 152 |
Msa0041270 | AT4G21410.3 | 36.719 | 256 | 152 | 6 | 13 | 265 | 13 | 261 | 3.30e-42 | 153 |
Msa0041270 | AT4G38830.1 | 37.273 | 220 | 132 | 5 | 39 | 256 | 32 | 247 | 2.88e-37 | 139 |
Msa0041270 | AT4G05200.2 | 36.145 | 249 | 139 | 9 | 11 | 254 | 33 | 266 | 1.61e-36 | 137 |
Msa0041270 | AT4G05200.1 | 36.145 | 249 | 139 | 9 | 11 | 254 | 15 | 248 | 1.82e-36 | 137 |
Msa0041270 | AT4G21400.3 | 34.667 | 225 | 142 | 4 | 43 | 265 | 42 | 263 | 2.77e-36 | 135 |
Msa0041270 | AT4G21400.6 | 34.667 | 225 | 142 | 4 | 43 | 265 | 42 | 263 | 3.59e-36 | 135 |
Msa0041270 | AT4G21400.4 | 34.667 | 225 | 142 | 4 | 43 | 265 | 42 | 263 | 3.59e-36 | 135 |
Msa0041270 | AT4G21400.5 | 34.667 | 225 | 142 | 4 | 43 | 265 | 42 | 263 | 3.59e-36 | 135 |
Msa0041270 | AT4G21400.2 | 33.071 | 254 | 163 | 5 | 14 | 265 | 15 | 263 | 7.22e-36 | 135 |
Msa0041270 | AT4G21400.1 | 33.071 | 254 | 163 | 5 | 14 | 265 | 15 | 263 | 8.41e-36 | 135 |
Msa0041270 | AT3G22060.1 | 31.707 | 246 | 160 | 4 | 3 | 248 | 7 | 244 | 2.72e-35 | 127 |
Msa0041270 | AT4G23170.1 | 38.426 | 216 | 118 | 8 | 45 | 254 | 39 | 245 | 3.54e-32 | 119 |
Msa0041270 | AT4G21400.7 | 35.829 | 187 | 116 | 3 | 80 | 265 | 54 | 237 | 5.14e-32 | 124 |
Msa0041270 | AT4G00970.2 | 38.835 | 206 | 114 | 6 | 53 | 254 | 65 | 262 | 2.28e-31 | 122 |
Msa0041270 | AT4G00970.1 | 38.835 | 206 | 114 | 6 | 53 | 254 | 65 | 262 | 3.89e-31 | 122 |
Msa0041270 | AT4G21230.1 | 36.530 | 219 | 120 | 8 | 41 | 254 | 37 | 241 | 6.30e-31 | 121 |
Msa0041270 | AT4G23220.1 | 32.212 | 208 | 139 | 2 | 43 | 248 | 29 | 236 | 8.53e-31 | 120 |
Msa0041270 | AT4G23180.3 | 36.752 | 234 | 132 | 9 | 29 | 258 | 36 | 257 | 2.89e-30 | 118 |
Msa0041270 | AT4G23160.3 | 37.220 | 223 | 127 | 7 | 41 | 258 | 632 | 846 | 3.04e-30 | 119 |
Msa0041270 | AT4G23160.2 | 37.220 | 223 | 127 | 7 | 41 | 258 | 632 | 846 | 3.04e-30 | 119 |
Msa0041270 | AT4G23160.1 | 37.220 | 223 | 127 | 7 | 41 | 258 | 52 | 266 | 3.95e-30 | 119 |
Msa0041270 | AT4G23180.2 | 36.752 | 234 | 132 | 9 | 29 | 258 | 36 | 257 | 5.40e-30 | 118 |
Msa0041270 | AT4G23280.3 | 37.383 | 214 | 122 | 6 | 44 | 254 | 38 | 242 | 6.29e-30 | 118 |
Msa0041270 | AT4G23180.1 | 36.752 | 234 | 132 | 9 | 29 | 258 | 36 | 257 | 7.09e-30 | 118 |
Msa0041270 | AT4G23280.1 | 37.383 | 214 | 122 | 6 | 44 | 254 | 38 | 242 | 7.54e-30 | 118 |
Msa0041270 | AT4G23280.2 | 37.383 | 214 | 122 | 6 | 44 | 254 | 38 | 242 | 7.96e-30 | 118 |
Msa0041270 | AT4G23150.1 | 35.146 | 239 | 142 | 7 | 24 | 258 | 20 | 249 | 1.55e-29 | 117 |
Msa0041270 | AT4G23130.3 | 35.577 | 208 | 123 | 7 | 51 | 255 | 46 | 245 | 4.48e-29 | 115 |
Msa0041270 | AT4G23130.2 | 35.577 | 208 | 123 | 7 | 51 | 255 | 46 | 245 | 5.72e-29 | 115 |
Msa0041270 | AT4G23130.1 | 35.577 | 208 | 123 | 7 | 51 | 255 | 46 | 245 | 6.08e-29 | 115 |
Msa0041270 | AT2G31620.1 | 30.942 | 223 | 141 | 6 | 40 | 256 | 40 | 255 | 4.47e-28 | 108 |
Msa0041270 | AT4G23210.3 | 32.589 | 224 | 130 | 6 | 40 | 248 | 29 | 246 | 5.98e-28 | 112 |
Msa0041270 | AT4G23210.2 | 32.589 | 224 | 130 | 6 | 40 | 248 | 29 | 246 | 6.67e-28 | 112 |
Msa0041270 | AT4G23210.4 | 32.589 | 224 | 130 | 6 | 40 | 248 | 29 | 246 | 6.67e-28 | 112 |
Msa0041270 | AT4G23200.2 | 29.524 | 210 | 142 | 2 | 45 | 248 | 30 | 239 | 8.07e-28 | 111 |
Msa0041270 | AT4G23210.1 | 32.589 | 224 | 130 | 6 | 40 | 248 | 29 | 246 | 8.22e-28 | 112 |
Msa0041270 | AT4G23210.5 | 32.589 | 224 | 130 | 6 | 40 | 248 | 29 | 246 | 8.27e-28 | 112 |
Msa0041270 | AT4G23300.1 | 32.735 | 223 | 129 | 6 | 41 | 248 | 30 | 246 | 8.63e-28 | 112 |
Msa0041270 | AT4G23200.1 | 29.524 | 210 | 142 | 2 | 45 | 248 | 30 | 239 | 1.14e-27 | 112 |
Msa0041270 | AT4G23140.2 | 35.176 | 199 | 115 | 6 | 65 | 258 | 61 | 250 | 8.79e-27 | 109 |
Msa0041270 | AT4G23140.1 | 35.176 | 199 | 115 | 6 | 65 | 258 | 61 | 250 | 9.08e-27 | 109 |
Msa0041270 | AT4G11521.1 | 28.889 | 225 | 147 | 3 | 32 | 248 | 18 | 237 | 5.85e-26 | 103 |
Msa0041270 | AT4G11460.3 | 31.651 | 218 | 134 | 5 | 43 | 248 | 32 | 246 | 9.88e-26 | 106 |
Msa0041270 | AT4G11460.1 | 31.651 | 218 | 134 | 5 | 43 | 248 | 32 | 246 | 1.02e-25 | 106 |
Msa0041270 | AT3G45860.1 | 37.186 | 199 | 109 | 7 | 65 | 258 | 64 | 251 | 4.86e-25 | 104 |
Msa0041270 | AT4G11530.1 | 26.506 | 249 | 163 | 4 | 9 | 248 | 5 | 242 | 7.12e-25 | 103 |
Msa0041270 | AT5G41290.1 | 29.555 | 247 | 155 | 8 | 12 | 249 | 7 | 243 | 1.95e-24 | 99.4 |
Msa0041270 | AT4G23230.1 | 34.135 | 208 | 124 | 7 | 51 | 254 | 43 | 241 | 4.11e-24 | 101 |
Msa0041270 | AT3G21960.1 | 27.490 | 251 | 171 | 6 | 3 | 248 | 11 | 255 | 9.86e-24 | 97.1 |
Msa0041270 | AT4G23270.2 | 32.540 | 252 | 152 | 10 | 7 | 254 | 3 | 240 | 1.39e-23 | 100 |
Msa0041270 | AT4G23270.1 | 32.540 | 252 | 152 | 10 | 7 | 254 | 3 | 240 | 1.39e-23 | 100 |
Msa0041270 | AT4G23190.1 | 31.818 | 220 | 137 | 6 | 39 | 248 | 28 | 244 | 1.42e-23 | 100 |
Msa0041270 | AT4G23270.3 | 32.540 | 252 | 152 | 10 | 7 | 254 | 3 | 240 | 1.58e-23 | 100 |
Msa0041270 | AT4G20640.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20630.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20580.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20600.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20620.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20610.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20590.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 1.64e-23 | 96.3 |
Msa0041270 | AT4G20570.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 21 | 263 | 1.99e-23 | 96.3 |
Msa0041270 | AT4G20560.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 21 | 263 | 1.99e-23 | 96.3 |
Msa0041270 | AT4G20540.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 21 | 263 | 1.99e-23 | 96.3 |
Msa0041270 | AT4G20645.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 21 | 263 | 1.99e-23 | 96.3 |
Msa0041270 | AT4G20530.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 21 | 263 | 1.99e-23 | 96.3 |
Msa0041270 | AT4G20550.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 21 | 263 | 1.99e-23 | 96.3 |
Msa0041270 | AT4G20670.1 | 28.112 | 249 | 168 | 5 | 5 | 248 | 7 | 249 | 2.08e-23 | 96.3 |
Msa0041270 | AT4G23190.2 | 32.110 | 218 | 135 | 6 | 41 | 248 | 30 | 244 | 2.19e-23 | 99.4 |
Msa0041270 | AT3G58310.1 | 26.556 | 241 | 171 | 4 | 9 | 248 | 14 | 249 | 8.96e-23 | 94.4 |
Msa0041270 | AT3G21990.1 | 27.309 | 249 | 170 | 5 | 5 | 248 | 7 | 249 | 1.36e-22 | 94.0 |
Msa0041270 | AT1G61750.1 | 30.660 | 212 | 139 | 6 | 43 | 251 | 38 | 244 | 2.34e-22 | 94.7 |
Msa0041270 | AT4G21410.1 | 40.580 | 138 | 78 | 3 | 130 | 265 | 1 | 136 | 2.57e-22 | 96.3 |
Msa0041270 | AT4G23240.1 | 29.630 | 216 | 145 | 4 | 43 | 254 | 33 | 245 | 3.80e-22 | 95.9 |
Msa0041270 | AT4G11490.1 | 29.954 | 217 | 144 | 3 | 38 | 248 | 27 | 241 | 5.99e-22 | 95.5 |
Msa0041270 | AT4G23250.3 | 28.448 | 232 | 148 | 6 | 36 | 254 | 30 | 256 | 9.59e-22 | 94.7 |
Msa0041270 | AT4G23250.1 | 28.448 | 232 | 148 | 6 | 36 | 254 | 30 | 256 | 1.02e-21 | 94.7 |
Msa0041270 | AT4G23250.2 | 28.448 | 232 | 148 | 6 | 36 | 254 | 30 | 256 | 1.17e-21 | 94.7 |
Msa0041270 | AT4G23250.2 | 27.358 | 212 | 129 | 5 | 43 | 254 | 733 | 919 | 1.23e-13 | 70.9 |
Msa0041270 | AT4G23310.1 | 33.005 | 203 | 123 | 6 | 50 | 248 | 157 | 350 | 4.44e-21 | 92.8 |
Msa0041270 | AT4G23310.2 | 33.005 | 203 | 123 | 6 | 50 | 248 | 157 | 350 | 4.80e-21 | 92.8 |
Msa0041270 | AT5G48540.1 | 29.435 | 248 | 158 | 7 | 13 | 256 | 9 | 243 | 1.06e-20 | 89.0 |
Msa0041270 | AT3G21910.1 | 28.634 | 227 | 148 | 7 | 42 | 258 | 48 | 270 | 1.27e-20 | 89.0 |
Msa0041270 | AT4G21400.8 | 37.226 | 137 | 84 | 2 | 130 | 265 | 1 | 136 | 1.51e-20 | 91.3 |
Msa0041270 | AT4G04500.2 | 31.731 | 208 | 127 | 5 | 61 | 255 | 49 | 254 | 1.94e-20 | 90.9 |
Msa0041270 | AT4G04500.3 | 31.731 | 208 | 127 | 5 | 61 | 255 | 49 | 254 | 1.94e-20 | 90.9 |
Msa0041270 | AT4G04500.1 | 31.731 | 208 | 127 | 5 | 61 | 255 | 49 | 254 | 2.05e-20 | 90.9 |
Msa0041270 | AT4G23260.2 | 28.636 | 220 | 149 | 5 | 36 | 249 | 30 | 247 | 3.93e-20 | 90.1 |
Msa0041270 | AT3G21920.1 | 30.204 | 245 | 141 | 11 | 32 | 258 | 40 | 272 | 4.89e-20 | 87.4 |
Msa0041270 | AT3G21920.2 | 30.204 | 245 | 141 | 11 | 32 | 258 | 62 | 294 | 5.00e-20 | 87.8 |
Msa0041270 | AT4G23260.1 | 28.636 | 220 | 149 | 5 | 36 | 249 | 30 | 247 | 5.21e-20 | 89.7 |
Msa0041270 | AT1G63580.1 | 29.469 | 207 | 139 | 5 | 49 | 250 | 35 | 239 | 1.35e-19 | 86.3 |
Msa0041270 | AT3G21930.1 | 29.084 | 251 | 148 | 11 | 32 | 264 | 40 | 278 | 1.39e-19 | 86.3 |
Msa0041270 | AT1G63600.1 | 28.054 | 221 | 149 | 4 | 35 | 250 | 39 | 254 | 1.50e-19 | 87.0 |
Msa0041270 | AT1G63550.1 | 28.972 | 214 | 145 | 4 | 40 | 250 | 37 | 246 | 1.71e-19 | 86.7 |
Msa0041270 | AT3G22040.1 | 27.907 | 258 | 159 | 9 | 4 | 248 | 7 | 250 | 2.70e-19 | 85.1 |
Msa0041270 | AT5G41300.1 | 26.531 | 245 | 171 | 4 | 6 | 247 | 7 | 245 | 1.42e-18 | 83.6 |
Msa0041270 | AT1G63570.3 | 26.000 | 250 | 170 | 5 | 3 | 249 | 4 | 241 | 1.84e-18 | 83.2 |
Msa0041270 | AT1G63570.1 | 26.000 | 250 | 170 | 5 | 3 | 249 | 4 | 241 | 1.84e-18 | 83.2 |
Msa0041270 | AT1G63570.2 | 26.000 | 250 | 170 | 5 | 3 | 249 | 57 | 294 | 2.61e-18 | 83.6 |
Msa0041270 | AT4G11460.2 | 31.609 | 174 | 104 | 5 | 87 | 248 | 1 | 171 | 3.83e-18 | 84.3 |
Msa0041270 | AT5G41280.1 | 27.935 | 247 | 160 | 6 | 12 | 249 | 7 | 244 | 2.26e-17 | 80.1 |
Msa0041270 | AT3G29050.2 | 27.372 | 274 | 175 | 9 | 4 | 258 | 10 | 278 | 2.37e-17 | 80.1 |
Msa0041270 | AT4G11470.2 | 25.701 | 214 | 144 | 6 | 51 | 254 | 43 | 251 | 7.56e-17 | 80.5 |
Msa0041270 | AT4G11470.1 | 25.701 | 214 | 144 | 6 | 51 | 254 | 38 | 246 | 8.36e-17 | 80.1 |
Msa0041270 | AT4G11480.2 | 22.927 | 205 | 149 | 3 | 50 | 250 | 37 | 236 | 1.09e-16 | 79.7 |
Msa0041270 | AT4G11480.4 | 22.927 | 205 | 149 | 3 | 50 | 250 | 37 | 236 | 1.18e-16 | 79.7 |
Msa0041270 | AT3G21940.1 | 29.091 | 275 | 162 | 12 | 2 | 255 | 12 | 274 | 1.18e-16 | 78.2 |
Msa0041270 | AT4G11480.1 | 22.927 | 205 | 149 | 3 | 50 | 250 | 37 | 236 | 1.29e-16 | 79.7 |
Msa0041270 | AT4G11480.3 | 22.927 | 205 | 149 | 3 | 50 | 250 | 37 | 236 | 1.32e-16 | 79.7 |
Msa0041270 | AT4G23190.3 | 31.361 | 169 | 104 | 5 | 89 | 248 | 1 | 166 | 1.75e-16 | 79.3 |
Msa0041270 | AT4G23190.4 | 31.361 | 169 | 104 | 5 | 89 | 248 | 1 | 166 | 1.75e-16 | 79.3 |
Msa0041270 | AT3G21940.2 | 30.556 | 180 | 106 | 4 | 92 | 255 | 3 | 179 | 2.08e-16 | 75.5 |
Msa0041270 | AT3G22010.1 | 27.928 | 222 | 132 | 9 | 42 | 248 | 48 | 256 | 1.13e-15 | 75.1 |
Msa0041270 | AT4G20680.1 | 28.342 | 187 | 123 | 5 | 71 | 248 | 76 | 260 | 4.32e-15 | 73.6 |
Msa0041270 | AT3G21900.2 | 25.481 | 208 | 146 | 4 | 41 | 248 | 45 | 243 | 1.60e-14 | 71.6 |
Msa0041270 | AT3G22050.1 | 26.941 | 219 | 134 | 6 | 43 | 248 | 46 | 251 | 1.79e-14 | 71.6 |
Msa0041270 | AT4G04570.1 | 27.179 | 195 | 132 | 4 | 68 | 254 | 59 | 251 | 2.14e-14 | 73.2 |
Msa0041270 | AT4G04570.2 | 27.179 | 195 | 132 | 4 | 68 | 254 | 59 | 251 | 2.24e-14 | 73.2 |
Msa0041270 | AT4G23290.2 | 28.293 | 205 | 137 | 6 | 51 | 248 | 41 | 242 | 3.38e-14 | 72.4 |
Msa0041270 | AT1G63590.1 | 25.405 | 185 | 131 | 3 | 71 | 250 | 64 | 246 | 7.01e-14 | 70.1 |
Msa0041270 | AT3G22000.1 | 25.498 | 251 | 172 | 8 | 8 | 248 | 15 | 260 | 1.37e-13 | 69.3 |
Msa0041270 | AT4G04510.1 | 28.283 | 198 | 119 | 6 | 71 | 254 | 60 | 248 | 1.84e-13 | 70.5 |
Msa0041270 | AT4G04510.2 | 28.283 | 198 | 119 | 6 | 71 | 254 | 62 | 250 | 1.93e-13 | 70.5 |
Msa0041270 | AT1G70690.1 | 27.805 | 205 | 124 | 8 | 49 | 248 | 48 | 233 | 2.59e-13 | 68.9 |
Msa0041270 | AT3G21970.1 | 26.786 | 224 | 144 | 7 | 39 | 248 | 40 | 257 | 1.73e-12 | 66.2 |
Msa0041270 | AT4G04490.1 | 26.126 | 222 | 131 | 7 | 50 | 253 | 40 | 246 | 1.92e-12 | 67.4 |
Msa0041270 | AT4G04540.4 | 23.111 | 225 | 158 | 6 | 43 | 254 | 32 | 254 | 2.17e-12 | 67.0 |
Msa0041270 | AT4G04540.1 | 23.111 | 225 | 158 | 6 | 43 | 254 | 32 | 254 | 3.14e-12 | 66.6 |
Msa0041270 | AT4G04540.3 | 23.111 | 225 | 158 | 6 | 43 | 254 | 32 | 254 | 3.21e-12 | 66.6 |
Msa0041270 | AT4G04540.2 | 23.111 | 225 | 158 | 6 | 43 | 254 | 32 | 254 | 3.72e-12 | 66.2 |
Msa0041270 | AT2G01660.2 | 24.206 | 252 | 153 | 11 | 10 | 249 | 6 | 231 | 9.43e-12 | 63.9 |
Msa0041270 | AT2G01660.3 | 24.206 | 252 | 153 | 11 | 10 | 249 | 6 | 231 | 1.32e-11 | 63.9 |
Msa0041270 | AT2G01660.1 | 24.206 | 252 | 153 | 11 | 10 | 249 | 6 | 231 | 1.41e-11 | 63.9 |
Msa0041270 | AT3G21900.1 | 24.038 | 208 | 141 | 4 | 41 | 248 | 45 | 235 | 3.71e-11 | 62.0 |
Find 48 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATTAGGCCTAAACGAAAT+TGG | 0.229067 | 1_1:+71633685 | Msa0041270:CDS |
TATTCAGACCGTTCTATATT+AGG | 0.252445 | 1_1:+71633670 | Msa0041270:CDS |
AGTTACCTCTATCGTTATTT+TGG | 0.283454 | 1_1:-71633384 | None:intergenic |
GGCAGATCAATTTAATATCT+TGG | 0.285791 | 1_1:+71633747 | Msa0041270:CDS |
CGTTTACTTTGTCATTGTTT+TGG | 0.299429 | 1_1:-71633507 | None:intergenic |
CTATCAACCTAAAGCAAAAC+TGG | 0.325641 | 1_1:+71634032 | Msa0041270:CDS |
TTTCAAGATGTTGTAGCAAT+AGG | 0.335675 | 1_1:+71633950 | Msa0041270:CDS |
TTGCTTTAGGTTGATAGAAT+TGG | 0.343077 | 1_1:-71634026 | None:intergenic |
TTAAGAAGCAAGGCTATAAA+TGG | 0.352413 | 1_1:+71633790 | Msa0041270:CDS |
TTGGTCGTTGTTGTCTGCTT+GGG | 0.365814 | 1_1:-71633341 | None:intergenic |
AAGCAGGTCCAATTTCGTTT+AGG | 0.394951 | 1_1:-71633693 | None:intergenic |
AGTAGTAATCAAATAATATA+TGG | 0.412356 | 1_1:+71633856 | Msa0041270:CDS |
TTAGACCAAGCTGTAATTTG+AGG | 0.412757 | 1_1:+71633989 | Msa0041270:CDS |
TTTGGTCGTTGTTGTCTGCT+TGG | 0.426348 | 1_1:-71633342 | None:intergenic |
GATAATTATGAGAAAGAGAA+AGG | 0.435798 | 1_1:-71633302 | None:intergenic |
CAGTGTACACCTGACTTGTC+TGG | 0.440744 | 1_1:+71633886 | Msa0041270:CDS |
TGCTTGTGTGAGATTGAATC+TGG | 0.442950 | 1_1:-71633590 | None:intergenic |
AATGACAAAGTAAACGTCAT+TGG | 0.446473 | 1_1:+71633514 | Msa0041270:CDS |
AGGCATTTGCGACAATCATC+AGG | 0.449621 | 1_1:-71633559 | None:intergenic |
TCACATCGTAAGTATGTTGT+AGG | 0.450527 | 1_1:+71633817 | Msa0041270:CDS |
TGCGACCAAAATAACGATAG+AGG | 0.460057 | 1_1:+71633379 | Msa0041270:CDS |
CTTGGGGTTTAGATGTGAAA+AGG | 0.460200 | 1_1:-71633324 | None:intergenic |
TATATTATTTGATTACTACT+AGG | 0.467816 | 1_1:-71633853 | None:intergenic |
GATAGAGGTAACTACATAAC+CGG | 0.483653 | 1_1:+71633394 | Msa0041270:CDS |
TGAGAAAGAGAAAGGAGAGT+GGG | 0.486566 | 1_1:-71633294 | None:intergenic |
TCAAACCTCAAATTACAGCT+TGG | 0.526400 | 1_1:-71633994 | None:intergenic |
ATTGAATGATTTAAGAAGCA+AGG | 0.526753 | 1_1:+71633780 | Msa0041270:CDS |
AGATGTTGTAGCAATAGGAT+TGG | 0.527777 | 1_1:+71633955 | Msa0041270:CDS |
CACTGGGGACCAGACAAGTC+AGG | 0.531473 | 1_1:-71633895 | None:intergenic |
GAGCAATTCTGAGGCTGTTG+TGG | 0.536469 | 1_1:-71633426 | None:intergenic |
GATTGTCGCAAATGCCTAGT+TGG | 0.540455 | 1_1:+71633565 | Msa0041270:CDS |
ATGAGAAAGAGAAAGGAGAG+TGG | 0.541993 | 1_1:-71633295 | None:intergenic |
GCTGTTGTGGTAGGTATCAC+CGG | 0.542628 | 1_1:-71633413 | None:intergenic |
AAGTTCCATGCAAAATAAGC+AGG | 0.549615 | 1_1:-71633709 | None:intergenic |
CGTTTAGGCCTAATATAGAA+CGG | 0.560797 | 1_1:-71633678 | None:intergenic |
GAACTTGAACAATGCAACAA+TGG | 0.575248 | 1_1:+71633726 | Msa0041270:CDS |
GATTGAATCTGGAACCAACT+AGG | 0.575788 | 1_1:-71633579 | None:intergenic |
TGGTCGTTGTTGTCTGCTTG+GGG | 0.575882 | 1_1:-71633340 | None:intergenic |
AATTCTGAGGCTGTTGTGGT+AGG | 0.584609 | 1_1:-71633422 | None:intergenic |
AAGCAAACAATCATCACACT+GGG | 0.585932 | 1_1:-71633911 | None:intergenic |
GAAGCAAACAATCATCACAC+TGG | 0.591047 | 1_1:-71633912 | None:intergenic |
TATGTTGTAGGAACAATGAC+GGG | 0.594989 | 1_1:+71633829 | Msa0041270:CDS |
GGTTTCTACAACACCAACAA+TGG | 0.608559 | 1_1:+71633484 | Msa0041270:CDS |
GTATGTTGTAGGAACAATGA+CGG | 0.611472 | 1_1:+71633828 | Msa0041270:CDS |
AACGTCATTGGAATATGTAG+AGG | 0.614721 | 1_1:+71633526 | Msa0041270:CDS |
AGAAGCAATTGGATGGTACG+AGG | 0.670531 | 1_1:+71633627 | Msa0041270:CDS |
GGGAGATTAGAGCAATTCTG+AGG | 0.693843 | 1_1:-71633435 | None:intergenic |
AGCAAACAATCATCACACTG+GGG | 0.800516 | 1_1:-71633910 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATTATTTGATTACTACT+AGG | - | chr1_1:71633856-71633875 | None:intergenic | 15.0% |
!! | AGTAGTAATCAAATAATATA+TGG | + | chr1_1:71633856-71633875 | Msa0041270:CDS | 15.0% |
!! | TATATTATTTGATTACTACT+AGG | - | chr1_1:71633856-71633875 | None:intergenic | 15.0% |
!! | AGTAGTAATCAAATAATATA+TGG | + | chr1_1:71633856-71633875 | Msa0041270:CDS | 15.0% |
! | GATAATTATGAGAAAGAGAA+AGG | - | chr1_1:71633305-71633324 | None:intergenic | 25.0% |
!!! | AATTTTTGAGTTGTAAGTGA+GGG | - | chr1_1:71633458-71633477 | None:intergenic | 25.0% |
! | TACAACTCAAAAATTGACTA+CGG | + | chr1_1:71633463-71633482 | Msa0041270:CDS | 25.0% |
!!! | CCAATTGCTTCTTTTTTATT+TGG | - | chr1_1:71633619-71633638 | None:intergenic | 25.0% |
! | CCAAATAAAAAAGAAGCAAT+TGG | + | chr1_1:71633616-71633635 | Msa0041270:CDS | 25.0% |
! | ATAAAAAAGAAGCAATTGGA+TGG | + | chr1_1:71633620-71633639 | Msa0041270:CDS | 25.0% |
! | ATTGAATGATTTAAGAAGCA+AGG | + | chr1_1:71633780-71633799 | Msa0041270:CDS | 25.0% |
! | GATAATTATGAGAAAGAGAA+AGG | - | chr1_1:71633305-71633324 | None:intergenic | 25.0% |
!!! | AATTTTTGAGTTGTAAGTGA+GGG | - | chr1_1:71633458-71633477 | None:intergenic | 25.0% |
! | TACAACTCAAAAATTGACTA+CGG | + | chr1_1:71633463-71633482 | Msa0041270:CDS | 25.0% |
!!! | CCAATTGCTTCTTTTTTATT+TGG | - | chr1_1:71633619-71633638 | None:intergenic | 25.0% |
! | CCAAATAAAAAAGAAGCAAT+TGG | + | chr1_1:71633616-71633635 | Msa0041270:CDS | 25.0% |
! | ATAAAAAAGAAGCAATTGGA+TGG | + | chr1_1:71633620-71633639 | Msa0041270:CDS | 25.0% |
! | ATTGAATGATTTAAGAAGCA+AGG | + | chr1_1:71633780-71633799 | Msa0041270:CDS | 25.0% |
! | CGCAAAAGTAGTGAAATTTT+TGG | - | chr1_1:71633363-71633382 | None:intergenic | 30.0% |
! | AGTTACCTCTATCGTTATTT+TGG | - | chr1_1:71633387-71633406 | None:intergenic | 30.0% |
!!! | CAATTTTTGAGTTGTAAGTG+AGG | - | chr1_1:71633459-71633478 | None:intergenic | 30.0% |
! | CGTTTACTTTGTCATTGTTT+TGG | - | chr1_1:71633510-71633529 | None:intergenic | 30.0% |
AATGACAAAGTAAACGTCAT+TGG | + | chr1_1:71633514-71633533 | Msa0041270:CDS | 30.0% | |
TATTCAGACCGTTCTATATT+AGG | + | chr1_1:71633670-71633689 | Msa0041270:CDS | 30.0% | |
ATATTAGGCCTAAACGAAAT+TGG | + | chr1_1:71633685-71633704 | Msa0041270:CDS | 30.0% | |
GGCAGATCAATTTAATATCT+TGG | + | chr1_1:71633747-71633766 | Msa0041270:CDS | 30.0% | |
TTAAGAAGCAAGGCTATAAA+TGG | + | chr1_1:71633790-71633809 | Msa0041270:CDS | 30.0% | |
TTTCAAGATGTTGTAGCAAT+AGG | + | chr1_1:71633950-71633969 | Msa0041270:CDS | 30.0% | |
!! | TTGCTTTAGGTTGATAGAAT+TGG | - | chr1_1:71634029-71634048 | None:intergenic | 30.0% |
! | CGCAAAAGTAGTGAAATTTT+TGG | - | chr1_1:71633363-71633382 | None:intergenic | 30.0% |
! | AGTTACCTCTATCGTTATTT+TGG | - | chr1_1:71633387-71633406 | None:intergenic | 30.0% |
!!! | CAATTTTTGAGTTGTAAGTG+AGG | - | chr1_1:71633459-71633478 | None:intergenic | 30.0% |
! | CGTTTACTTTGTCATTGTTT+TGG | - | chr1_1:71633510-71633529 | None:intergenic | 30.0% |
AATGACAAAGTAAACGTCAT+TGG | + | chr1_1:71633514-71633533 | Msa0041270:CDS | 30.0% | |
TATTCAGACCGTTCTATATT+AGG | + | chr1_1:71633670-71633689 | Msa0041270:CDS | 30.0% | |
ATATTAGGCCTAAACGAAAT+TGG | + | chr1_1:71633685-71633704 | Msa0041270:CDS | 30.0% | |
GGCAGATCAATTTAATATCT+TGG | + | chr1_1:71633747-71633766 | Msa0041270:CDS | 30.0% | |
TTAAGAAGCAAGGCTATAAA+TGG | + | chr1_1:71633790-71633809 | Msa0041270:CDS | 30.0% | |
TTTCAAGATGTTGTAGCAAT+AGG | + | chr1_1:71633950-71633969 | Msa0041270:CDS | 30.0% | |
!! | TTGCTTTAGGTTGATAGAAT+TGG | - | chr1_1:71634029-71634048 | None:intergenic | 30.0% |
GATAGAGGTAACTACATAAC+CGG | + | chr1_1:71633394-71633413 | Msa0041270:CDS | 35.0% | |
AACGTCATTGGAATATGTAG+AGG | + | chr1_1:71633526-71633545 | Msa0041270:CDS | 35.0% | |
CGTTTAGGCCTAATATAGAA+CGG | - | chr1_1:71633681-71633700 | None:intergenic | 35.0% | |
AAGTTCCATGCAAAATAAGC+AGG | - | chr1_1:71633712-71633731 | None:intergenic | 35.0% | |
GAACTTGAACAATGCAACAA+TGG | + | chr1_1:71633726-71633745 | Msa0041270:CDS | 35.0% | |
TCACATCGTAAGTATGTTGT+AGG | + | chr1_1:71633817-71633836 | Msa0041270:CDS | 35.0% | |
GTATGTTGTAGGAACAATGA+CGG | + | chr1_1:71633828-71633847 | Msa0041270:CDS | 35.0% | |
TATGTTGTAGGAACAATGAC+GGG | + | chr1_1:71633829-71633848 | Msa0041270:CDS | 35.0% | |
AAGCAAACAATCATCACACT+GGG | - | chr1_1:71633914-71633933 | None:intergenic | 35.0% | |
AGATGTTGTAGCAATAGGAT+TGG | + | chr1_1:71633955-71633974 | Msa0041270:CDS | 35.0% | |
TTAGACCAAGCTGTAATTTG+AGG | + | chr1_1:71633989-71634008 | Msa0041270:CDS | 35.0% | |
TCAAACCTCAAATTACAGCT+TGG | - | chr1_1:71633997-71634016 | None:intergenic | 35.0% | |
CTATCAACCTAAAGCAAAAC+TGG | + | chr1_1:71634032-71634051 | Msa0041270:CDS | 35.0% | |
GATAGAGGTAACTACATAAC+CGG | + | chr1_1:71633394-71633413 | Msa0041270:CDS | 35.0% | |
AACGTCATTGGAATATGTAG+AGG | + | chr1_1:71633526-71633545 | Msa0041270:CDS | 35.0% | |
CGTTTAGGCCTAATATAGAA+CGG | - | chr1_1:71633681-71633700 | None:intergenic | 35.0% | |
AAGTTCCATGCAAAATAAGC+AGG | - | chr1_1:71633712-71633731 | None:intergenic | 35.0% | |
GAACTTGAACAATGCAACAA+TGG | + | chr1_1:71633726-71633745 | Msa0041270:CDS | 35.0% | |
TCACATCGTAAGTATGTTGT+AGG | + | chr1_1:71633817-71633836 | Msa0041270:CDS | 35.0% | |
GTATGTTGTAGGAACAATGA+CGG | + | chr1_1:71633828-71633847 | Msa0041270:CDS | 35.0% | |
TATGTTGTAGGAACAATGAC+GGG | + | chr1_1:71633829-71633848 | Msa0041270:CDS | 35.0% | |
AAGCAAACAATCATCACACT+GGG | - | chr1_1:71633914-71633933 | None:intergenic | 35.0% | |
AGATGTTGTAGCAATAGGAT+TGG | + | chr1_1:71633955-71633974 | Msa0041270:CDS | 35.0% | |
TTAGACCAAGCTGTAATTTG+AGG | + | chr1_1:71633989-71634008 | Msa0041270:CDS | 35.0% | |
TCAAACCTCAAATTACAGCT+TGG | - | chr1_1:71633997-71634016 | None:intergenic | 35.0% | |
CTATCAACCTAAAGCAAAAC+TGG | + | chr1_1:71634032-71634051 | Msa0041270:CDS | 35.0% | |
TGAGAAAGAGAAAGGAGAGT+GGG | - | chr1_1:71633297-71633316 | None:intergenic | 40.0% | |
ATGAGAAAGAGAAAGGAGAG+TGG | - | chr1_1:71633298-71633317 | None:intergenic | 40.0% | |
CTTGGGGTTTAGATGTGAAA+AGG | - | chr1_1:71633327-71633346 | None:intergenic | 40.0% | |
TGCGACCAAAATAACGATAG+AGG | + | chr1_1:71633379-71633398 | Msa0041270:CDS | 40.0% | |
GGTTTCTACAACACCAACAA+TGG | + | chr1_1:71633484-71633503 | Msa0041270:CDS | 40.0% | |
!!! | GTCATTGTTTTGGCCATTGT+TGG | - | chr1_1:71633500-71633519 | None:intergenic | 40.0% |
! | GATTGAATCTGGAACCAACT+AGG | - | chr1_1:71633582-71633601 | None:intergenic | 40.0% |
TGCTTGTGTGAGATTGAATC+TGG | - | chr1_1:71633593-71633612 | None:intergenic | 40.0% | |
AAGCAGGTCCAATTTCGTTT+AGG | - | chr1_1:71633696-71633715 | None:intergenic | 40.0% | |
!!! | TTGGACCTGCTTATTTTGCA+TGG | + | chr1_1:71633704-71633723 | Msa0041270:CDS | 40.0% |
AGCAAACAATCATCACACTG+GGG | - | chr1_1:71633913-71633932 | None:intergenic | 40.0% | |
GAAGCAAACAATCATCACAC+TGG | - | chr1_1:71633915-71633934 | None:intergenic | 40.0% | |
! | TGTGAAGCCAGTTTTGCTTT+AGG | - | chr1_1:71634042-71634061 | None:intergenic | 40.0% |
TGAGAAAGAGAAAGGAGAGT+GGG | - | chr1_1:71633297-71633316 | None:intergenic | 40.0% | |
ATGAGAAAGAGAAAGGAGAG+TGG | - | chr1_1:71633298-71633317 | None:intergenic | 40.0% | |
CTTGGGGTTTAGATGTGAAA+AGG | - | chr1_1:71633327-71633346 | None:intergenic | 40.0% | |
TGCGACCAAAATAACGATAG+AGG | + | chr1_1:71633379-71633398 | Msa0041270:CDS | 40.0% | |
GGTTTCTACAACACCAACAA+TGG | + | chr1_1:71633484-71633503 | Msa0041270:CDS | 40.0% | |
!!! | GTCATTGTTTTGGCCATTGT+TGG | - | chr1_1:71633500-71633519 | None:intergenic | 40.0% |
! | GATTGAATCTGGAACCAACT+AGG | - | chr1_1:71633582-71633601 | None:intergenic | 40.0% |
TGCTTGTGTGAGATTGAATC+TGG | - | chr1_1:71633593-71633612 | None:intergenic | 40.0% | |
AAGCAGGTCCAATTTCGTTT+AGG | - | chr1_1:71633696-71633715 | None:intergenic | 40.0% | |
!!! | TTGGACCTGCTTATTTTGCA+TGG | + | chr1_1:71633704-71633723 | Msa0041270:CDS | 40.0% |
AGCAAACAATCATCACACTG+GGG | - | chr1_1:71633913-71633932 | None:intergenic | 40.0% | |
GAAGCAAACAATCATCACAC+TGG | - | chr1_1:71633915-71633934 | None:intergenic | 40.0% | |
! | TGTGAAGCCAGTTTTGCTTT+AGG | - | chr1_1:71634042-71634061 | None:intergenic | 40.0% |
TTGGTCGTTGTTGTCTGCTT+GGG | - | chr1_1:71633344-71633363 | None:intergenic | 45.0% | |
TTTGGTCGTTGTTGTCTGCT+TGG | - | chr1_1:71633345-71633364 | None:intergenic | 45.0% | |
!! | AATTCTGAGGCTGTTGTGGT+AGG | - | chr1_1:71633425-71633444 | None:intergenic | 45.0% |
GGGAGATTAGAGCAATTCTG+AGG | - | chr1_1:71633438-71633457 | None:intergenic | 45.0% | |
AGGCATTTGCGACAATCATC+AGG | - | chr1_1:71633562-71633581 | None:intergenic | 45.0% | |
GATTGTCGCAAATGCCTAGT+TGG | + | chr1_1:71633565-71633584 | Msa0041270:CDS | 45.0% | |
AGAAGCAATTGGATGGTACG+AGG | + | chr1_1:71633627-71633646 | Msa0041270:CDS | 45.0% | |
TTGGTCGTTGTTGTCTGCTT+GGG | - | chr1_1:71633344-71633363 | None:intergenic | 45.0% | |
TTTGGTCGTTGTTGTCTGCT+TGG | - | chr1_1:71633345-71633364 | None:intergenic | 45.0% | |
!! | AATTCTGAGGCTGTTGTGGT+AGG | - | chr1_1:71633425-71633444 | None:intergenic | 45.0% |
GGGAGATTAGAGCAATTCTG+AGG | - | chr1_1:71633438-71633457 | None:intergenic | 45.0% | |
AGGCATTTGCGACAATCATC+AGG | - | chr1_1:71633562-71633581 | None:intergenic | 45.0% | |
GATTGTCGCAAATGCCTAGT+TGG | + | chr1_1:71633565-71633584 | Msa0041270:CDS | 45.0% | |
AGAAGCAATTGGATGGTACG+AGG | + | chr1_1:71633627-71633646 | Msa0041270:CDS | 45.0% | |
TGGTCGTTGTTGTCTGCTTG+GGG | - | chr1_1:71633343-71633362 | None:intergenic | 50.0% | |
GCTGTTGTGGTAGGTATCAC+CGG | - | chr1_1:71633416-71633435 | None:intergenic | 50.0% | |
!! | GAGCAATTCTGAGGCTGTTG+TGG | - | chr1_1:71633429-71633448 | None:intergenic | 50.0% |
! | CAGTGTACACCTGACTTGTC+TGG | + | chr1_1:71633886-71633905 | Msa0041270:CDS | 50.0% |
TGGTCGTTGTTGTCTGCTTG+GGG | - | chr1_1:71633343-71633362 | None:intergenic | 50.0% | |
GCTGTTGTGGTAGGTATCAC+CGG | - | chr1_1:71633416-71633435 | None:intergenic | 50.0% | |
!! | GAGCAATTCTGAGGCTGTTG+TGG | - | chr1_1:71633429-71633448 | None:intergenic | 50.0% |
! | CAGTGTACACCTGACTTGTC+TGG | + | chr1_1:71633886-71633905 | Msa0041270:CDS | 50.0% |
CACTGGGGACCAGACAAGTC+AGG | - | chr1_1:71633898-71633917 | None:intergenic | 60.0% | |
CACTGGGGACCAGACAAGTC+AGG | - | chr1_1:71633898-71633917 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 71633274 | 71634071 | 71633274 | ID=Msa0041270;Name=Msa0041270 |
chr1_1 | mRNA | 71633274 | 71634071 | 71633274 | ID=Msa0041270-mRNA-1;Parent=Msa0041270;Name=Msa0041270-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|265 |
chr1_1 | exon | 71633274 | 71634071 | 71633274 | ID=Msa0041270-mRNA-1:exon:23734;Parent=Msa0041270-mRNA-1 |
chr1_1 | CDS | 71633274 | 71634071 | 71633274 | ID=Msa0041270-mRNA-1:cds;Parent=Msa0041270-mRNA-1 |
Gene Sequence |
Protein sequence |