AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222120 MtrunA17_Chr2g0326841 99.043 209 2 0 1 209 1 209 7.83e-156 429
Msa0222120 MtrunA17_Chr7g0264181 87.317 205 26 0 3 207 4 208 1.62e-133 373
Msa0222120 MtrunA17_Chr1g0181131 85.990 207 29 0 1 207 1 207 2.34e-133 373
Msa0222120 MtrunA17_Chr4g0028871 89.899 198 20 0 12 209 12 209 1.00e-132 371
Msa0222120 MtrunA17_Chr3g0142491 76.329 207 49 0 1 207 3 209 1.25e-119 338
Msa0222120 MtrunA17_Chr1g0177391 76.410 195 46 0 10 204 6 200 3.25e-114 324
Msa0222120 MtrunA17_Chr1g0151201 69.000 200 60 1 11 208 7 206 4.14e-102 294
Msa0222120 MtrunA17_Chr1g0156401 66.964 112 16 1 40 130 1 112 7.38e-45 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222120 AT2G28305.1 88.945 199 22 0 10 208 5 203 1.37e-132 371
Msa0222120 AT2G37210.1 85.644 202 29 0 7 208 8 209 1.59e-130 366
Msa0222120 AT3G53450.1 84.236 203 32 0 7 209 8 210 1.59e-127 358
Msa0222120 AT2G37210.2 76.106 226 30 1 7 208 8 233 1.39e-124 352
Msa0222120 AT2G28305.3 90.659 182 17 0 10 191 5 186 6.26e-122 343
Msa0222120 AT5G06300.1 79.000 200 42 0 5 204 1 200 7.27e-118 334
Msa0222120 AT5G03270.1 82.796 186 32 0 10 195 16 201 2.70e-113 322
Msa0222120 AT2G35990.1 71.144 201 58 0 5 205 1 201 1.46e-110 315
Msa0222120 AT5G03270.2 82.873 181 31 0 10 190 16 196 4.77e-109 311
Msa0222120 AT4G35190.1 69.458 203 62 0 5 207 1 203 2.47e-105 303
Msa0222120 AT5G11950.1 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0222120 AT5G11950.2 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0222120 AT5G11950.3 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0222120 AT4G35190.2 70.103 194 56 1 5 198 1 192 1.16e-100 290
Msa0222120 AT2G28305.2 92.593 135 10 0 10 144 5 139 6.22e-89 258
Msa0222120 AT2G35990.3 71.812 149 42 0 57 205 1 149 5.61e-80 236
Msa0222120 AT2G35990.2 71.812 149 42 0 57 205 1 149 5.61e-80 236
Msa0222120 AT5G11950.4 68.421 152 48 0 57 208 1 152 3.92e-74 221
Msa0222120 AT5G26140.2 53.061 147 47 1 84 208 6 152 2.46e-45 148
Msa0222120 AT5G26140.1 51.880 133 42 1 98 208 1 133 6.09e-38 129
Msa0222120 AT5G26140.3 56.863 102 44 0 107 208 17 118 2.06e-34 119

Find 67 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATATTGATCTAGTTTA+TGG 0.105402 2_1:-71126879 Msa0222120:CDS
CTCTCTTGGCATTAGTGTTT+TGG 0.116726 2_1:+71126597 None:intergenic
TGTTTCTACTTTAATTACTA+TGG 0.284874 2_1:+71127468 None:intergenic
GATGGTGGTCGACATGTAAT+TGG 0.286287 2_1:-71126810 Msa0222120:CDS
AATGATGCTGACTCGTCTAT+AGG 0.325760 2_1:+71127391 None:intergenic
GTTAATGTAAACTATCGATT+TGG 0.336123 2_1:-71121694 Msa0222120:three_prime_UTR
CCAACCTGGTAAGGCTATAA+AGG 0.339119 2_1:+71125477 None:intergenic
ATACTACTGCTGCAGCTTAC+TGG 0.346715 2_1:-71125574 Msa0222120:intron
ATGATGCTGACTCGTCTATA+GGG 0.353587 2_1:+71127392 None:intergenic
TATTGAACTTGGAAAAGAAT+TGG 0.373481 2_1:-71127155 Msa0222120:intron
AGGAGGCAGCATTGGTTTGA+TGG 0.380464 2_1:-71126856 Msa0222120:CDS
TGGTAACAAAACTAGCTATA+AGG 0.381980 2_1:-71127185 Msa0222120:CDS
CGGTTATATGGTATATATAA+AGG 0.383302 2_1:+71127324 None:intergenic
CTGCATAACTTTACCTCTCT+TGG 0.385694 2_1:+71126583 None:intergenic
GTGGTATAAGCGCGGTTATA+TGG 0.390897 2_1:+71127312 None:intergenic
GGAGGCAGCATTGGTTTGAT+GGG 0.391809 2_1:-71126855 Msa0222120:CDS
GCATCAAAGGAAAGCTGAAA+TGG 0.434148 2_1:-71125515 Msa0222120:CDS
TATTTGCATGAAGGTGGGTA+TGG 0.435005 2_1:-71122541 Msa0222120:intron
GAGTTGCCTCCAAGCTAAGC+TGG 0.437628 2_1:-71121904 Msa0222120:CDS
TTTGTCGATGAAAGTCAAAA+AGG 0.444110 2_1:+71122318 None:intergenic
AAATCTTTACCGGTTTATCA+TGG 0.448590 2_1:+71122470 None:intergenic
GTGGGATTGCTGAATGTTGA+TGG 0.455471 2_1:-71122352 Msa0222120:CDS
CCTTTGATATGAGTGGTTGA+TGG 0.456369 2_1:+71127288 None:intergenic
AAGGATGCTGCTATTGAACT+TGG 0.459571 2_1:-71127166 Msa0222120:CDS
TCTCTCACCTTTGATATGAG+TGG 0.472849 2_1:+71127281 None:intergenic
GGTAGAAGATCACAATTTCA+TGG 0.474201 2_1:-71121750 Msa0222120:three_prime_UTR
TTTGAATGAATGGTGAAAGA+GGG 0.481457 2_1:-71127493 None:intergenic
TTGGTGCAGACACAATTATA+TGG 0.490804 2_1:+71122260 None:intergenic
TTGTTTGTACCAACCTGGTA+AGG 0.495823 2_1:+71125468 None:intergenic
GTTTATGGAGGAGGCAGCAT+TGG 0.498113 2_1:-71126864 Msa0222120:CDS
CACAATTATATGGCGAGCTG+TGG 0.500721 2_1:+71122270 None:intergenic
ACTTGGCATCCATGATAAAC+CGG 0.501203 2_1:-71122479 Msa0222120:intron
ATTTCCCAAGCTGTTTATGA+TGG 0.505165 2_1:-71126828 Msa0222120:CDS
GATGCCTTTATAGCCTTACC+AGG 0.517415 2_1:-71125481 Msa0222120:intron
ACAATTATATGGCGAGCTGT+GGG 0.517777 2_1:+71122271 None:intergenic
TCCCAAGCTGTTTATGATGG+TGG 0.519492 2_1:-71126825 Msa0222120:CDS
ACCACCATCATAAACAGCTT+GGG 0.519561 2_1:+71126824 None:intergenic
ATTGATCTAGTTTATGGAGG+AGG 0.523752 2_1:-71126873 Msa0222120:CDS
GACAACTCAAGGAACTACTA+TGG 0.525382 2_1:-71121771 Msa0222120:three_prime_UTR
AGGCAACTCTTTCATGCTGT+GGG 0.528340 2_1:+71121918 None:intergenic
TCAAAGGTGAGAGAGAAGAA+TGG 0.531372 2_1:-71127272 Msa0222120:exon
GTGATAACATGGGCTCAACT+TGG 0.532726 2_1:-71122496 Msa0222120:CDS
CAGTAGCTGACATGCATCAA+AGG 0.536960 2_1:-71125528 Msa0222120:CDS
GACCACCATCATAAACAGCT+TGG 0.537227 2_1:+71126823 None:intergenic
GAGGCAGCATTGGTTTGATG+GGG 0.537940 2_1:-71126854 Msa0222120:CDS
ATCGACAAAGCTGTGGAGGA+AGG 0.545903 2_1:-71122304 Msa0222120:CDS
GAGGCAACTCTTTCATGCTG+TGG 0.549574 2_1:+71121917 None:intergenic
ATTTGCATGAAGGTGGGTAT+GGG 0.550161 2_1:-71122540 Msa0222120:intron
GACTTTCATCGACAAAGCTG+TGG 0.562460 2_1:-71122311 Msa0222120:CDS
AGCTCCTTGAGGTGATAACA+TGG 0.564557 2_1:-71122507 Msa0222120:CDS
CAGCTTACTGGTGAAACAGT+AGG 0.570843 2_1:-71125562 Msa0222120:CDS
ATGGTGGTCGACATGTAATT+GGG 0.573816 2_1:-71126809 Msa0222120:intron
GATATGAGTGGTTGATGGTG+TGG 0.576120 2_1:+71127293 None:intergenic
AATATTGATCTAGTTTATGG+AGG 0.578824 2_1:-71126876 Msa0222120:CDS
TTGAATGAATGGTGAAAGAG+GGG 0.580105 2_1:-71127492 None:intergenic
AGTTGCCTCCAAGCTAAGCT+GGG 0.587565 2_1:-71121903 Msa0222120:CDS
CCATCAACCACTCATATCAA+AGG 0.611945 2_1:-71127288 Msa0222120:five_prime_UTR
GAGCCCATGTTATCACCTCA+AGG 0.614099 2_1:+71122503 None:intergenic
TCAAAATGTGAGACAACTCA+AGG 0.622102 2_1:-71121782 Msa0222120:three_prime_UTR
TTTCATCGACAAAGCTGTGG+AGG 0.624003 2_1:-71122308 Msa0222120:CDS
CAAAACACTAATGCCAAGAG+AGG 0.626831 2_1:-71126596 Msa0222120:intron
GACACTTGAGGAGCTCCTTG+AGG 0.631827 2_1:-71122518 Msa0222120:CDS
GACTCGTCTATAGGGAACCA+AGG 0.651655 2_1:+71127400 None:intergenic
CAATTATATGGCGAGCTGTG+GGG 0.655172 2_1:+71122272 None:intergenic
AGGTGGGTATGGGACACTTG+AGG 0.655697 2_1:-71122530 Msa0222120:CDS
GCTCCTTGAGGTGATAACAT+GGG 0.684486 2_1:-71122506 Msa0222120:CDS
TTGATGGTGTGGTATAAGCG+CGG 0.761838 2_1:+71127304 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACTTATATTTTGTTA+TGG + chr2_1:71122137-71122156 None:intergenic 10.0%
!!! TTGTATTTTGATATATAAAA+AGG - chr2_1:71122236-71122255 Msa0222120:CDS 10.0%
!! ATGATAAAGAATATAAAAAA+GGG + chr2_1:71122930-71122949 None:intergenic 10.0%
!!! AAATTAAAGTTTACATTTTA+TGG + chr2_1:71123920-71123939 None:intergenic 10.0%
!! TTCATGATGATAATAAAATA+AGG + chr2_1:71122048-71122067 None:intergenic 15.0%
!! GATGATAAAGAATATAAAAA+AGG + chr2_1:71122931-71122950 None:intergenic 15.0%
!!! GTGTCATTTTAATTATTTTT+TGG + chr2_1:71123186-71123205 None:intergenic 15.0%
!! CTTCTAATATTTGATTAAAT+GGG - chr2_1:71123944-71123963 Msa0222120:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2_1:71124242-71124261 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_1:71124266-71124285 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_1:71124265-71124284 Msa0222120:intron 15.0%
!! AAAATGAAAAGAGAAAAAAA+AGG + chr2_1:71124540-71124559 None:intergenic 15.0%
!!! TTTTTTTCTCTTTTCATTTT+AGG - chr2_1:71124540-71124559 Msa0222120:intron 15.0%
!! ATTTGTCATGTAATAATTAA+TGG + chr2_1:71125349-71125368 None:intergenic 15.0%
!! AAACATCAAAAATAAAGATT+AGG - chr2_1:71125402-71125421 Msa0222120:intron 15.0%
!!! AAAGATTATTGAATATTTTG+AGG - chr2_1:71125913-71125932 Msa0222120:intron 15.0%
!!! GATGATTGTATATTTTTTTA+AGG + chr2_1:71126469-71126488 None:intergenic 15.0%
!!! ATAAAAGTTTTTGTTTTTGA+AGG - chr2_1:71126769-71126788 Msa0222120:intron 15.0%
!!! TGTTTCTACTTTAATTACTA+TGG + chr2_1:71121678-71121697 None:intergenic 20.0%
!! ATATCATATCATAGGTATAT+AGG + chr2_1:71122191-71122210 None:intergenic 20.0%
!! TATATACCTATGATATGATA+TGG - chr2_1:71122190-71122209 Msa0222120:intron 20.0%
!!! AGAAATATTGATCTAGTTTA+TGG - chr2_1:71122264-71122283 Msa0222120:CDS 20.0%
!! AGTTTGTAAATTTGAACTAT+AGG + chr2_1:71122800-71122819 None:intergenic 20.0%
!! TATATTCTTTATCATCATTG+AGG - chr2_1:71122935-71122954 Msa0222120:intron 20.0%
!! TTAAATGATTAAACATTGCA+AGG - chr2_1:71123082-71123101 Msa0222120:intron 20.0%
!! ATTAAGCGTCATTTAAAAAT+TGG + chr2_1:71123138-71123157 None:intergenic 20.0%
!! TTGAATAAAATTATCCTTAG+TGG + chr2_1:71123250-71123269 None:intergenic 20.0%
!! AAATATCGACAGTTAATATA+TGG + chr2_1:71123279-71123298 None:intergenic 20.0%
!! CCATTTAATCAAATATTAGA+AGG + chr2_1:71123946-71123965 None:intergenic 20.0%
!! CCTTCTAATATTTGATTAAA+TGG - chr2_1:71123943-71123962 Msa0222120:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_1:71124256-71124275 Msa0222120:intron 20.0%
!! ATGATTAAAAAGAAAGAGAA+TGG + chr2_1:71124299-71124318 None:intergenic 20.0%
!! TTATGTGTAATTCATCTTAA+AGG + chr2_1:71124699-71124718 None:intergenic 20.0%
!! TTAAAAGTTGACAAATTCAA+TGG - chr2_1:71124757-71124776 Msa0222120:intron 20.0%
!!! TTGTTGGTTAAAATCTATAT+AGG - chr2_1:71124882-71124901 Msa0222120:intron 20.0%
!!! ATTTGTTTTAGGTTAAAAGA+TGG + chr2_1:71125054-71125073 None:intergenic 20.0%
!!! GGTTAAGTTTTATTTGTTTT+AGG + chr2_1:71125065-71125084 None:intergenic 20.0%
!!! AAAATATTTTCCCTGAAAAA+CGG - chr2_1:71125215-71125234 Msa0222120:intron 20.0%
!!! CTTATCACTTTTCAATTAAT+GGG + chr2_1:71125433-71125452 None:intergenic 20.0%
!!! TCTTATCACTTTTCAATTAA+TGG + chr2_1:71125434-71125453 None:intergenic 20.0%
!! TTAATTGAAAAGTGATAAGA+TGG - chr2_1:71125434-71125453 Msa0222120:intron 20.0%
!!! ATTATATTTCAAGTAACGTT+TGG + chr2_1:71125652-71125671 None:intergenic 20.0%
!! ATCAAAATACCTATTATTGA+AGG + chr2_1:71125711-71125730 None:intergenic 20.0%
!! ATTACGATAAAGTAAAACAA+AGG + chr2_1:71125749-71125768 None:intergenic 20.0%
!! AAAACCAAATCAATAATGTT+TGG + chr2_1:71125960-71125979 None:intergenic 20.0%
!!! GAAAAAATTGGTTTCAAAAT+GGG + chr2_1:71126546-71126565 None:intergenic 20.0%
!!! AGAAAAAATTGGTTTCAAAA+TGG + chr2_1:71126547-71126566 None:intergenic 20.0%
!! GTACTAGAAATAGAAAAAAT+TGG + chr2_1:71126558-71126577 None:intergenic 20.0%
!!! GCAAATTTTATCTCATAAAA+GGG + chr2_1:71126745-71126764 None:intergenic 20.0%
!!! AGCAAATTTTATCTCATAAA+AGG + chr2_1:71126746-71126765 None:intergenic 20.0%
!!! AGAATTAGTTTTCATTCTTT+TGG - chr2_1:71127180-71127199 Msa0222120:CDS 20.0%
! CGGTTATATGGTATATATAA+AGG + chr2_1:71121822-71121841 None:intergenic 25.0%
! TATTGAACTTGGAAAAGAAT+TGG - chr2_1:71121988-71122007 Msa0222120:intron 25.0%
! TCAAAAGAATTTGACGTATT+TGG - chr2_1:71122161-71122180 Msa0222120:intron 25.0%
! TAAACACCATATCATATCAT+AGG + chr2_1:71122199-71122218 None:intergenic 25.0%
!! AATATTGATCTAGTTTATGG+AGG - chr2_1:71122267-71122286 Msa0222120:CDS 25.0%
!! TCTTCTTCTTAAACCTATTT+TGG - chr2_1:71122385-71122404 Msa0222120:intron 25.0%
! ATATTGAGATAACAAAAGCA+TGG + chr2_1:71122687-71122706 None:intergenic 25.0%
! CCAAGCTTAAATTTATGATA+GGG + chr2_1:71123006-71123025 None:intergenic 25.0%
! ACAAATAAAAAAATGTGTCG+CGG + chr2_1:71123355-71123374 None:intergenic 25.0%
!! ATGTAATGATGAGTTTTTGA+AGG + chr2_1:71123429-71123448 None:intergenic 25.0%
! AGTGATATGAGTATTTAGTA+GGG + chr2_1:71123486-71123505 None:intergenic 25.0%
! CTATTGTTTCAGTGATAATT+TGG - chr2_1:71123543-71123562 Msa0222120:intron 25.0%
! ATGATTCACAAGTTTAATAG+TGG + chr2_1:71124028-71124047 None:intergenic 25.0%
!! AGTAGTGATTCACTAATTTT+TGG + chr2_1:71124052-71124071 None:intergenic 25.0%
!! TATGTGTTGGTATATTTAGA+TGG - chr2_1:71124390-71124409 Msa0222120:intron 25.0%
!!! TTGGAAAGCACTTAAATTTT+TGG - chr2_1:71124649-71124668 Msa0222120:intron 25.0%
!! TTTTAACCAACAAAAAGAGT+AGG + chr2_1:71124875-71124894 None:intergenic 25.0%
! ATGTGATTCCTATGTAAATT+TGG + chr2_1:71124912-71124931 None:intergenic 25.0%
!! GTAAGTTCAAAAATTCCTTT+TGG + chr2_1:71125295-71125314 None:intergenic 25.0%
!! TATAGTTGATACGATCAAAT+TGG - chr2_1:71125547-71125566 Msa0222120:CDS 25.0%
! GAGAAATTCTAATATAGTCA+CGG - chr2_1:71125817-71125836 Msa0222120:intron 25.0%
! AGAAATTCTAATATAGTCAC+GGG - chr2_1:71125818-71125837 Msa0222120:intron 25.0%
!!! ATTTTTTTTTCCTGATGGTA+CGG + chr2_1:71126299-71126318 None:intergenic 25.0%
!!! AGACAATTTTTTTTTCCTGA+TGG + chr2_1:71126304-71126323 None:intergenic 25.0%
!! TTTCTTCTGAGTTTGAATTT+TGG + chr2_1:71126403-71126422 None:intergenic 25.0%
!!! ATTTTTTTAAGGACCAATGT+TGG + chr2_1:71126458-71126477 None:intergenic 25.0%
! ATACAATCATCTAACAAAAC+TGG - chr2_1:71126478-71126497 Msa0222120:intron 25.0%
! TACAATCATCTAACAAAACT+GGG - chr2_1:71126479-71126498 Msa0222120:intron 25.0%
!!! TAGTACCATGTTTTCTAAAA+GGG - chr2_1:71126572-71126591 Msa0222120:intron 25.0%
!!! TATAACCCTTTTAGAAAACA+TGG + chr2_1:71126580-71126599 None:intergenic 25.0%
! GGTTATATATATTTGCATGA+AGG - chr2_1:71126593-71126612 Msa0222120:intron 25.0%
! TATATATATTTGCATGAAGG+TGG - chr2_1:71126596-71126615 Msa0222120:intron 25.0%
! ATATATATTTGCATGAAGGT+GGG - chr2_1:71126597-71126616 Msa0222120:CDS 25.0%
! TGTAGAATGAAAATCTTTAC+CGG + chr2_1:71126686-71126705 None:intergenic 25.0%
!!! AAAGTTTTTGTTTTTGAAGG+TGG - chr2_1:71126772-71126791 Msa0222120:intron 25.0%
!!! AAGTTTTTGTTTTTGAAGGT+GGG - chr2_1:71126773-71126792 Msa0222120:intron 25.0%
!!! ATATTTTTGACAAGCTCTTT+TGG + chr2_1:71126911-71126930 None:intergenic 25.0%
! AAAAGAGCTTGTCAAAAATA+TGG - chr2_1:71126910-71126929 Msa0222120:intron 25.0%
!! TCTTAGATTTCACAATTTTG+AGG + chr2_1:71127287-71127306 None:intergenic 25.0%
!! TGAAATCTAAGATGATTAGA+TGG - chr2_1:71127295-71127314 Msa0222120:five_prime_UTR 25.0%
!! GTTAATGTAAACTATCGATT+TGG - chr2_1:71127449-71127468 Msa0222120:five_prime_UTR 25.0%
! ACATTGTATCAAGTTTTCCT+TGG - chr2_1:71121726-71121745 Msa0222120:three_prime_UTR 30.0%
!! TCAGCATCATTTTAATGATG+TGG - chr2_1:71121764-71121783 Msa0222120:three_prime_UTR 30.0%
! AAGAGAATTTGTGTGTTTTG+TGG - chr2_1:71121926-71121945 Msa0222120:CDS 30.0%
!!! TATAGCTAGTTTTGTTACCA+GGG + chr2_1:71121958-71121977 None:intergenic 30.0%
!!! TTATAGCTAGTTTTGTTACC+AGG + chr2_1:71121959-71121978 None:intergenic 30.0%
TGGTAACAAAACTAGCTATA+AGG - chr2_1:71121958-71121977 Msa0222120:intron 30.0%
GGTTTCTGTAAATCCAAAAT+AGG + chr2_1:71122401-71122420 None:intergenic 30.0%
CGATAAATTTGACGATATCA+CGG + chr2_1:71122446-71122465 None:intergenic 30.0%
CTTATCTATCAATATACACC+TGG - chr2_1:71122818-71122837 Msa0222120:intron 30.0%
! AGAATCTAAAGGGTGTAATA+TGG + chr2_1:71122895-71122914 None:intergenic 30.0%
AATGCCAATGAGAATCTAAA+GGG + chr2_1:71122905-71122924 None:intergenic 30.0%
TAATGCCAATGAGAATCTAA+AGG + chr2_1:71122906-71122925 None:intergenic 30.0%
CCCTATCATAAATTTAAGCT+TGG - chr2_1:71123003-71123022 Msa0222120:intron 30.0%
GCCAAGCTTAAATTTATGAT+AGG + chr2_1:71123007-71123026 None:intergenic 30.0%
TTAAATGACGCTTAATTGCA+AGG - chr2_1:71123142-71123161 Msa0222120:intron 30.0%
AAAATGCATTTGTATCAGCA+GGG + chr2_1:71123456-71123475 None:intergenic 30.0%
AAAAATGCATTTGTATCAGC+AGG + chr2_1:71123457-71123476 None:intergenic 30.0%
! TGCTGATACAAATGCATTTT+TGG - chr2_1:71123456-71123475 Msa0222120:intron 30.0%
GAGTGATATGAGTATTTAGT+AGG + chr2_1:71123487-71123506 None:intergenic 30.0%
AAATATTGGAGCTAGAAAGA+AGG + chr2_1:71123701-71123720 None:intergenic 30.0%
! TAGCTCCAATATTTTTCTCA+TGG - chr2_1:71123707-71123726 Msa0222120:intron 30.0%
! TCCAATATTTTTCTCATGGA+TGG - chr2_1:71123711-71123730 Msa0222120:intron 30.0%
ACCATCCATGAGAAAAATAT+TGG + chr2_1:71123715-71123734 None:intergenic 30.0%
TGTGGAATGTAAATTCCAAT+AGG - chr2_1:71123734-71123753 Msa0222120:intron 30.0%
TTCCAATAGGTGATTCATTA+AGG - chr2_1:71123747-71123766 Msa0222120:intron 30.0%
CGAATTTGGATTTATGAAGT+TGG - chr2_1:71123833-71123852 Msa0222120:intron 30.0%
ATTTGGATTTATGAAGTTGG+AGG - chr2_1:71123836-71123855 Msa0222120:intron 30.0%
GGGTATCTCTATAAATGTAA+GGG - chr2_1:71123994-71124013 Msa0222120:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2_1:71124348-71124367 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2_1:71124349-71124368 Msa0222120:intron 30.0%
GTATTATTGGTCATATGTGT+TGG - chr2_1:71124377-71124396 Msa0222120:intron 30.0%
AAAGTGGGGAAAAAATTGAT+TGG + chr2_1:71124626-71124645 None:intergenic 30.0%
!!! ATTTTTTCCCCACTTTTTGT+TGG - chr2_1:71124630-71124649 Msa0222120:intron 30.0%
!!! ATTTTTGGAATTTGCAAGAG+TGG - chr2_1:71124664-71124683 Msa0222120:intron 30.0%
AAGAGTAGGTTGTAAAGTTT+AGG + chr2_1:71124861-71124880 None:intergenic 30.0%
! TTACAACCTACTCTTTTTGT+TGG - chr2_1:71124866-71124885 Msa0222120:intron 30.0%
TGATTCCTATGTAAATTTGG+TGG + chr2_1:71124909-71124928 None:intergenic 30.0%
! ATCATCTGAGTTGGATAATT+TGG + chr2_1:71125086-71125105 None:intergenic 30.0%
AGCTTATTAATCATCTGAGT+TGG + chr2_1:71125095-71125114 None:intergenic 30.0%
CTTTCAAAGCCTTCAATAAT+AGG - chr2_1:71125699-71125718 Msa0222120:intron 30.0%
! GTGTCCAAACATTATTGATT+TGG - chr2_1:71125953-71125972 Msa0222120:intron 30.0%
GAGATTAAAGTGTGTGAAAA+CGG + chr2_1:71126142-71126161 None:intergenic 30.0%
!!! CCTACAACTTTTTTAACTCT+AGG + chr2_1:71126379-71126398 None:intergenic 30.0%
CCTAGAGTTAAAAAAGTTGT+AGG - chr2_1:71126376-71126395 Msa0222120:intron 30.0%
!! AATGTTGGTGATTAGTTGTT+AGG + chr2_1:71126443-71126462 None:intergenic 30.0%
TAACAACTAATCACCAACAT+TGG - chr2_1:71126442-71126461 Msa0222120:intron 30.0%
ACAATCATCTAACAAAACTG+GGG - chr2_1:71126480-71126499 Msa0222120:intron 30.0%
! CTAGTACCATGTTTTCTAAA+AGG - chr2_1:71126571-71126590 Msa0222120:intron 30.0%
!! AAATCTTTACCGGTTTATCA+TGG + chr2_1:71126676-71126695 None:intergenic 30.0%
TTTGTCGATGAAAGTCAAAA+AGG + chr2_1:71126828-71126847 None:intergenic 30.0%
! GTTGGATAGAAGTATATAGA+TGG + chr2_1:71126944-71126963 None:intergenic 30.0%
TAGTCTATTCTCAGTTCAAT+CGG + chr2_1:71126980-71126999 None:intergenic 30.0%
GAACTGAGAATAGACTAATT+AGG - chr2_1:71126983-71127002 Msa0222120:intron 30.0%
AAGATTGAACCGCATTAAAT+CGG - chr2_1:71127057-71127076 Msa0222120:intron 30.0%
TTGAAGAACCAGTGAAAATT+CGG + chr2_1:71127151-71127170 None:intergenic 30.0%
!!! TCTTTTGGTTTCATTCATGT+AGG - chr2_1:71127195-71127214 Msa0222120:CDS 30.0%
! ATTGATCTAGTTTATGGAGG+AGG - chr2_1:71122270-71122289 Msa0222120:CDS 35.0%
ATTTCCCAAGCTGTTTATGA+TGG - chr2_1:71122315-71122334 Msa0222120:CDS 35.0%
TAAATTTGACGATATCACGG+TGG + chr2_1:71122443-71122462 None:intergenic 35.0%
! TCTCTTGGCATTAGTGTTTT+GGG + chr2_1:71122548-71122567 None:intergenic 35.0%
TGTGCGATTATTCATTCAAG+TGG - chr2_1:71122731-71122750 Msa0222120:intron 35.0%
GTGCGATTATTCATTCAAGT+GGG - chr2_1:71122732-71122751 Msa0222120:intron 35.0%
GAAAGACAAAATGGTTCAGA+AGG + chr2_1:71122862-71122881 None:intergenic 35.0%
ACATGGAGAGAAAGACAAAA+TGG + chr2_1:71122871-71122890 None:intergenic 35.0%
! AAAGGGTGTAATATGGAACA+TGG + chr2_1:71122888-71122907 None:intergenic 35.0%
TACACCCTTTAGATTCTCAT+TGG - chr2_1:71122898-71122917 Msa0222120:intron 35.0%
CCTTAGTGGAGTTTATTCAT+AGG + chr2_1:71123236-71123255 None:intergenic 35.0%
CCTATGAATAAACTCCACTA+AGG - chr2_1:71123233-71123252 Msa0222120:intron 35.0%
!! GATGAGTTTTTGAAGGTAGT+GGG + chr2_1:71123422-71123441 None:intergenic 35.0%
!! TGATGAGTTTTTGAAGGTAG+TGG + chr2_1:71123423-71123442 None:intergenic 35.0%
! TATTTTTCTCATGGATGGTG+TGG - chr2_1:71123716-71123735 Msa0222120:intron 35.0%
TGCCTTAATGAATCACCTAT+TGG + chr2_1:71123752-71123771 None:intergenic 35.0%
TCATTAAGGCACATGTCAAA+AGG - chr2_1:71123761-71123780 Msa0222120:intron 35.0%
CAAATTCGTCTATAGTCATG+CGG + chr2_1:71123821-71123840 None:intergenic 35.0%
! GGGGTATCTCTATAAATGTA+AGG - chr2_1:71123993-71124012 Msa0222120:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_1:71124113-71124132 None:intergenic 35.0%
GGAAAAAATTGATTGGCAGT+TGG + chr2_1:71124619-71124638 None:intergenic 35.0%
AGTGCTTTCCAACAAAAAGT+GGG + chr2_1:71124641-71124660 None:intergenic 35.0%
AAGTGCTTTCCAACAAAAAG+TGG + chr2_1:71124642-71124661 None:intergenic 35.0%
GACAAATTCAATGGAAGAGA+TGG - chr2_1:71124766-71124785 Msa0222120:intron 35.0%
CAATATCAATCGCTACTCAT+TGG + chr2_1:71124804-71124823 None:intergenic 35.0%
TAGGTCCACCAAATTTACAT+AGG - chr2_1:71124901-71124920 Msa0222120:intron 35.0%
TAGGTTAAAAGATGGTTGAC+TGG + chr2_1:71125046-71125065 None:intergenic 35.0%
!! AGGTCTAATTCCGTTTTTCA+GGG + chr2_1:71125228-71125247 None:intergenic 35.0%
! AATTCCTTTTGGACATCGTA+TGG + chr2_1:71125284-71125303 None:intergenic 35.0%
! TAATTAATGGACAACCGAAG+TGG + chr2_1:71125336-71125355 None:intergenic 35.0%
TGCAAGATCGATGTAAGAAT+GGG + chr2_1:71125795-71125814 None:intergenic 35.0%
TTGCAAGATCGATGTAAGAA+TGG + chr2_1:71125796-71125815 None:intergenic 35.0%
ATTCTTACATCGATCTTGCA+AGG - chr2_1:71125795-71125814 Msa0222120:intron 35.0%
! GTGACCAAACACTATTTTCT+TGG + chr2_1:71125845-71125864 None:intergenic 35.0%
!!! TTGATTTGGTTTTGTGACCA+TGG - chr2_1:71125967-71125986 Msa0222120:intron 35.0%
AAGAATATCTCTCTTGCAAG+TGG - chr2_1:71125990-71126009 Msa0222120:intron 35.0%
! CTATATCTTTGGGTTTGTGT+GGG + chr2_1:71126020-71126039 None:intergenic 35.0%
CACACAAACCCAAAGATATA+GGG - chr2_1:71126019-71126038 Msa0222120:intron 35.0%
ACACAAACCCAAAGATATAG+GGG - chr2_1:71126020-71126039 Msa0222120:intron 35.0%
CTCAGCTACTAGAATTTGAT+CGG - chr2_1:71126159-71126178 Msa0222120:intron 35.0%
AAATCTGCATCCCATGATAA+GGG - chr2_1:71126221-71126240 Msa0222120:intron 35.0%
AAAAACAAATCCGTACCATC+AGG - chr2_1:71126286-71126305 Msa0222120:intron 35.0%
TTGGTGCAGACACAATTATA+TGG + chr2_1:71126886-71126905 None:intergenic 35.0%
AGAGCTTGTCAAAAATATGG+AGG - chr2_1:71126913-71126932 Msa0222120:intron 35.0%
ATCGGTTAAATCGAAAACGT+TGG + chr2_1:71126962-71126981 None:intergenic 35.0%
CTGAGAATAGACTAATTAGG+TGG - chr2_1:71126986-71127005 Msa0222120:intron 35.0%
GAATAGACTAATTAGGTGGT+TGG - chr2_1:71126990-71127009 Msa0222120:intron 35.0%
!! TTAGGTGGTTGGTTTAATCT+AGG - chr2_1:71127001-71127020 Msa0222120:intron 35.0%
! AATTCGGGTTATGGTTCAAT+TGG + chr2_1:71127135-71127154 None:intergenic 35.0%
TGAAGAACCAGTGAAAATTC+GGG + chr2_1:71127150-71127169 None:intergenic 35.0%
GATGATTAGATGGTAATCGA+TGG - chr2_1:71127305-71127324 Msa0222120:five_prime_UTR 35.0%
TCAAAATGTGAGACAACTCA+AGG - chr2_1:71127361-71127380 Msa0222120:five_prime_UTR 35.0%
GGTAGAAGATCACAATTTCA+TGG - chr2_1:71127393-71127412 Msa0222120:five_prime_UTR 35.0%
! GTAAGAGCACACAAAAATCT+CGG + chr2_1:71127421-71127440 None:intergenic 35.0%
!! ATGATGCTGACTCGTCTATA+GGG + chr2_1:71121754-71121773 None:intergenic 40.0%
!! AATGATGCTGACTCGTCTAT+AGG + chr2_1:71121755-71121774 None:intergenic 40.0%
CCTTTGATATGAGTGGTTGA+TGG + chr2_1:71121858-71121877 None:intergenic 40.0%
CCATCAACCACTCATATCAA+AGG - chr2_1:71121855-71121874 Msa0222120:three_prime_UTR 40.0%
TCTCTCACCTTTGATATGAG+TGG + chr2_1:71121865-71121884 None:intergenic 40.0%
TCAAAGGTGAGAGAGAAGAA+TGG - chr2_1:71121871-71121890 Msa0222120:exon 40.0%
AAGGATGCTGCTATTGAACT+TGG - chr2_1:71121977-71121996 Msa0222120:intron 40.0%
ACCACCATCATAAACAGCTT+GGG + chr2_1:71122322-71122341 None:intergenic 40.0%
ATGGTGGTCGACATGTAATT+GGG - chr2_1:71122334-71122353 Msa0222120:CDS 40.0%
GAAGAAGAAGATGAAGCTCT+TGG + chr2_1:71122364-71122383 None:intergenic 40.0%
! CTCTCTTGGCATTAGTGTTT+TGG + chr2_1:71122549-71122568 None:intergenic 40.0%
CAAAACACTAATGCCAAGAG+AGG - chr2_1:71122547-71122566 Msa0222120:intron 40.0%
CTGCATAACTTTACCTCTCT+TGG + chr2_1:71122563-71122582 None:intergenic 40.0%
GAGGTAAAGTTATGCAGCTT+TGG - chr2_1:71122566-71122585 Msa0222120:intron 40.0%
TTCATTCAAGTGGGAACTAG+TGG - chr2_1:71122741-71122760 Msa0222120:intron 40.0%
TCAATATACACCTGGCAATC+TGG - chr2_1:71122826-71122845 Msa0222120:intron 40.0%
CAATATACACCTGGCAATCT+GGG - chr2_1:71122827-71122846 Msa0222120:intron 40.0%
AATATACACCTGGCAATCTG+GGG - chr2_1:71122828-71122847 Msa0222120:intron 40.0%
GCATCAAAGGAAAGCTGAAA+TGG - chr2_1:71123628-71123647 Msa0222120:intron 40.0%
TTGTTTGTACCAACCTGGTA+AGG + chr2_1:71123678-71123697 None:intergenic 40.0%
CGCATGACTATAGACGAATT+TGG - chr2_1:71123819-71123838 Msa0222120:intron 40.0%
TTGTCACGATTGCATGAATG+CGG + chr2_1:71123865-71123884 None:intergenic 40.0%
TCATGCAATCGTGACAACAT+CGG - chr2_1:71123868-71123887 Msa0222120:intron 40.0%
ATATTCTAACCGCGTGAACT+AGG - chr2_1:71123972-71123991 Msa0222120:intron 40.0%
TATTCTAACCGCGTGAACTA+GGG - chr2_1:71123973-71123992 Msa0222120:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_1:71124353-71124372 None:intergenic 40.0%
TGTGCTGCGTATTAATTGGA+GGG + chr2_1:71124213-71124232 None:intergenic 40.0%
GTAGTGTGCTGCGTATTAAT+TGG + chr2_1:71124217-71124236 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_1:71124353-71124372 Msa0222120:intron 40.0%
!! TGAAACGGAGGGAGTATTAT+TGG - chr2_1:71124364-71124383 Msa0222120:intron 40.0%
GTGCTTTCCAACAAAAAGTG+GGG + chr2_1:71124640-71124659 None:intergenic 40.0%
!! GAGGTCTAATTCCGTTTTTC+AGG + chr2_1:71125229-71125248 None:intergenic 40.0%
GACATGTCAATACGACTTAG+AGG + chr2_1:71125248-71125267 None:intergenic 40.0%
AAGACCATACGATGTCCAAA+AGG - chr2_1:71125277-71125296 Msa0222120:intron 40.0%
ATTACATGAATGCGCCACTT+CGG - chr2_1:71125319-71125338 Msa0222120:intron 40.0%
!! GAAGGCTTTGAAAGCGATTA+AGG + chr2_1:71125693-71125712 None:intergenic 40.0%
GGGACCAAGAAAATAGTGTT+TGG - chr2_1:71125838-71125857 Msa0222120:intron 40.0%
GCAAGAGAGATATTCTTCCA+TGG + chr2_1:71125987-71126006 None:intergenic 40.0%
! CCTATATCTTTGGGTTTGTG+TGG + chr2_1:71126021-71126040 None:intergenic 40.0%
CCACACAAACCCAAAGATAT+AGG - chr2_1:71126018-71126037 Msa0222120:intron 40.0%
GCTACTAGAATTTGATCGGA+TGG - chr2_1:71126163-71126182 Msa0222120:intron 40.0%
GAAATCTGCATCCCATGATA+AGG - chr2_1:71126220-71126239 Msa0222120:intron 40.0%
ATCTAACAAAACTGGGGAAG+TGG - chr2_1:71126486-71126505 Msa0222120:intron 40.0%
TATTTGCATGAAGGTGGGTA+TGG - chr2_1:71126602-71126621 Msa0222120:CDS 40.0%
ATTTGCATGAAGGTGGGTAT+GGG - chr2_1:71126603-71126622 Msa0222120:CDS 40.0%
ACTTGGCATCCATGATAAAC+CGG - chr2_1:71126664-71126683 Msa0222120:intron 40.0%
ACAATTATATGGCGAGCTGT+GGG + chr2_1:71126875-71126894 None:intergenic 40.0%
!! TTGACAAGCTCTTTTGGTGT+TGG + chr2_1:71126905-71126924 None:intergenic 40.0%
! GCGATTCAACCGATTTAATG+CGG + chr2_1:71127069-71127088 None:intergenic 40.0%
GCATTAAATCGGTTGAATCG+CGG - chr2_1:71127068-71127087 Msa0222120:intron 40.0%
! ACCATAACCCGAATTTTCAC+TGG - chr2_1:71127140-71127159 Msa0222120:intron 40.0%
! ACCAGTGAAAATTCGGGTTA+TGG + chr2_1:71127144-71127163 None:intergenic 40.0%
! TTCATTTTCCCAGCTTAGCT+TGG + chr2_1:71127251-71127270 None:intergenic 40.0%
GACAACTCAAGGAACTACTA+TGG - chr2_1:71127372-71127391 Msa0222120:five_prime_UTR 40.0%
GTGGTATAAGCGCGGTTATA+TGG + chr2_1:71121834-71121853 None:intergenic 45.0%
!! TTGATGGTGTGGTATAAGCG+CGG + chr2_1:71121842-71121861 None:intergenic 45.0%
!! GATATGAGTGGTTGATGGTG+TGG + chr2_1:71121853-71121872 None:intergenic 45.0%
TCCCAAGCTGTTTATGATGG+TGG - chr2_1:71122318-71122337 Msa0222120:CDS 45.0%
GACCACCATCATAAACAGCT+TGG + chr2_1:71122323-71122342 None:intergenic 45.0%
! GATGGTGGTCGACATGTAAT+TGG - chr2_1:71122333-71122352 Msa0222120:CDS 45.0%
GGCACAATGCGATTATGCTA+GGG + chr2_1:71122422-71122441 None:intergenic 45.0%
TGGCACAATGCGATTATGCT+AGG + chr2_1:71122423-71122442 None:intergenic 45.0%
ATAAACAACCCCAGATTGCC+AGG + chr2_1:71122839-71122858 None:intergenic 45.0%
! CATTGCAAGGCTAATTTGCC+AGG - chr2_1:71123095-71123114 Msa0222120:intron 45.0%
! TTGCCAGGATTAGCGATTAC+AGG - chr2_1:71123110-71123129 Msa0222120:intron 45.0%
! TGCCAGGATTAGCGATTACA+GGG - chr2_1:71123111-71123130 Msa0222120:intron 45.0%
ATACTACTGCTGCAGCTTAC+TGG - chr2_1:71123569-71123588 Msa0222120:intron 45.0%
CAGCTTACTGGTGAAACAGT+AGG - chr2_1:71123581-71123600 Msa0222120:intron 45.0%
CAGTAGCTGACATGCATCAA+AGG - chr2_1:71123615-71123634 Msa0222120:intron 45.0%
! GATGCCTTTATAGCCTTACC+AGG - chr2_1:71123662-71123681 Msa0222120:intron 45.0%
CCAACCTGGTAAGGCTATAA+AGG + chr2_1:71123669-71123688 None:intergenic 45.0%
! CCTTTATAGCCTTACCAGGT+TGG - chr2_1:71123666-71123685 Msa0222120:intron 45.0%
GAAGGTTGTTTGTACCAACC+TGG + chr2_1:71123683-71123702 None:intergenic 45.0%
ATTCTAACCGCGTGAACTAG+GGG - chr2_1:71123974-71123993 Msa0222120:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_1:71124352-71124371 None:intergenic 45.0%
GTGTGCTGCGTATTAATTGG+AGG + chr2_1:71124214-71124233 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_1:71124352-71124371 Msa0222120:intron 45.0%
CAATGGAAGAGATGGTGAAG+AGG - chr2_1:71124774-71124793 Msa0222120:intron 45.0%
TCATGGGCCCCTATATCTTT+GGG + chr2_1:71126030-71126049 None:intergenic 45.0%
ATCATGGGCCCCTATATCTT+TGG + chr2_1:71126031-71126050 None:intergenic 45.0%
AGATATAGGGGCCCATGATA+AGG - chr2_1:71126032-71126051 Msa0222120:intron 45.0%
GATATAGGGGCCCATGATAA+GGG - chr2_1:71126033-71126052 Msa0222120:intron 45.0%
TGCGTGAAGCAATTACAGCA+GGG + chr2_1:71126068-71126087 None:intergenic 45.0%
GCCATTGAACACTGATCCAA+CGG - chr2_1:71126101-71126120 Msa0222120:intron 45.0%
ACCGTTGGATCAGTGTTCAA+TGG + chr2_1:71126105-71126124 None:intergenic 45.0%
GACAGAACTATCGTAACCGT+TGG + chr2_1:71126120-71126139 None:intergenic 45.0%
CTAGAATTTGATCGGATGGC+TGG - chr2_1:71126167-71126186 Msa0222120:intron 45.0%
AGATTTCCTGCTGTAACAGC+AGG + chr2_1:71126207-71126226 None:intergenic 45.0%
GAGAAAGCTGCCCTTATCAT+GGG + chr2_1:71126234-71126253 None:intergenic 45.0%
AGAGAAAGCTGCCCTTATCA+TGG + chr2_1:71126235-71126254 None:intergenic 45.0%
AGCTCCTTGAGGTGATAACA+TGG - chr2_1:71126636-71126655 Msa0222120:intron 45.0%
GCTCCTTGAGGTGATAACAT+GGG - chr2_1:71126637-71126656 Msa0222120:intron 45.0%
GTGGGATTGCTGAATGTTGA+TGG - chr2_1:71126791-71126810 Msa0222120:intron 45.0%
GACTTTCATCGACAAAGCTG+TGG - chr2_1:71126832-71126851 Msa0222120:CDS 45.0%
TTTCATCGACAAAGCTGTGG+AGG - chr2_1:71126835-71126854 Msa0222120:CDS 45.0%
CAATTATATGGCGAGCTGTG+GGG + chr2_1:71126874-71126893 None:intergenic 45.0%
CACAATTATATGGCGAGCTG+TGG + chr2_1:71126876-71126895 None:intergenic 45.0%
AGGCAACTCTTTCATGCTGT+GGG + chr2_1:71127228-71127247 None:intergenic 45.0%
!! ATTTTCCCAGCTTAGCTTGG+AGG + chr2_1:71127248-71127267 None:intergenic 45.0%
!! AATTAAATATTAGATTTATA+TGG + chr2_1:71123029-71123048 None:intergenic 5.0%
!!! AATATAATTTTGATATATTT+TGG + chr2_1:71124439-71124458 None:intergenic 5.0%
GACTCGTCTATAGGGAACCA+AGG + chr2_1:71121746-71121765 None:intergenic 50.0%
! GTGTTTTGTGGTAGTAGCCC+TGG - chr2_1:71121938-71121957 Msa0222120:intron 50.0%
GTTTATGGAGGAGGCAGCAT+TGG - chr2_1:71122279-71122298 Msa0222120:CDS 50.0%
!! AGGAGGCAGCATTGGTTTGA+TGG - chr2_1:71122287-71122306 Msa0222120:CDS 50.0%
!! GGAGGCAGCATTGGTTTGAT+GGG - chr2_1:71122288-71122307 Msa0222120:CDS 50.0%
!! GAGGCAGCATTGGTTTGATG+GGG - chr2_1:71122289-71122308 Msa0222120:CDS 50.0%
GTCCCTGTAATCGCTAATCC+TGG + chr2_1:71123116-71123135 None:intergenic 50.0%
AGAGATACCCCTAGTTCACG+CGG + chr2_1:71123984-71124003 None:intergenic 50.0%
GGAATTTGCAAGAGTGGTGC+AGG - chr2_1:71124670-71124689 Msa0222120:intron 50.0%
GGATCCAGGTCCCTTATCAT+GGG + chr2_1:71126046-71126065 None:intergenic 50.0%
GCGTGAAGCAATTACAGCAG+GGG + chr2_1:71126067-71126086 None:intergenic 50.0%
CTGCGTGAAGCAATTACAGC+AGG + chr2_1:71126069-71126088 None:intergenic 50.0%
GCTGTAATTGCTTCACGCAG+TGG - chr2_1:71126069-71126088 Msa0222120:intron 50.0%
ATAGCACCTGCTGTTACAGC+AGG - chr2_1:71126198-71126217 Msa0222120:intron 50.0%
GAGCCCATGTTATCACCTCA+AGG + chr2_1:71126643-71126662 None:intergenic 50.0%
ATCGACAAAGCTGTGGAGGA+AGG - chr2_1:71126839-71126858 Msa0222120:CDS 50.0%
GAGGCAACTCTTTCATGCTG+TGG + chr2_1:71127229-71127248 None:intergenic 50.0%
AGTTGCCTCCAAGCTAAGCT+GGG - chr2_1:71127240-71127259 Msa0222120:CDS 50.0%
GGGATCCAGGTCCCTTATCA+TGG + chr2_1:71126047-71126066 None:intergenic 55.0%
GCAATTACAGCAGGGGATCC+AGG + chr2_1:71126060-71126079 None:intergenic 55.0%
AGGTGGGTATGGGACACTTG+AGG - chr2_1:71126613-71126632 Msa0222120:intron 55.0%
GACACTTGAGGAGCTCCTTG+AGG - chr2_1:71126625-71126644 Msa0222120:intron 55.0%
GAGTTGCCTCCAAGCTAAGC+TGG - chr2_1:71127239-71127258 Msa0222120:CDS 55.0%
GGCAGTTGGCACGTCACAAG+TGG + chr2_1:71124605-71124624 None:intergenic 60.0%
GGGGCCCATGATAAGGGACC+TGG - chr2_1:71126039-71126058 Msa0222120:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 71121664 71127501 71121664 ID=Msa0222120;Name=Msa0222120
chr2_1 mRNA 71121664 71127501 71121664 ID=Msa0222120-mRNA-1;Parent=Msa0222120;Name=Msa0222120-mRNA-1;_AED=0.10;_eAED=0.10;_QI=226|1|1|1|0.71|0.75|8|191|209
chr2_1 exon 71121664 71121823 71121664 ID=Msa0222120-mRNA-1:exon:20453;Parent=Msa0222120-mRNA-1
chr2_1 exon 71121852 71121948 71121852 ID=Msa0222120-mRNA-1:exon:20452;Parent=Msa0222120-mRNA-1
chr2_1 exon 71122231 71122374 71122231 ID=Msa0222120-mRNA-1:exon:20451;Parent=Msa0222120-mRNA-1
chr2_1 exon 71122480 71122550 71122480 ID=Msa0222120-mRNA-1:exon:20450;Parent=Msa0222120-mRNA-1
chr2_1 exon 71125482 71125581 71125482 ID=Msa0222120-mRNA-1:exon:20449;Parent=Msa0222120-mRNA-1
chr2_1 exon 71126597 71126627 71126597 ID=Msa0222120-mRNA-1:exon:20448;Parent=Msa0222120-mRNA-1
chr2_1 exon 71126810 71126907 71126810 ID=Msa0222120-mRNA-1:exon:20447;Parent=Msa0222120-mRNA-1
chr2_1 exon 71127156 71127501 71127156 ID=Msa0222120-mRNA-1:exon:20446;Parent=Msa0222120-mRNA-1
chr2_1 five_prime_UTR 71127276 71127501 71127276 ID=Msa0222120-mRNA-1:five_prime_utr;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71127156 71127275 71127156 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71126810 71126907 71126810 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71126597 71126627 71126597 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71125482 71125581 71125482 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71122480 71122550 71122480 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71122231 71122374 71122231 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 CDS 71121883 71121948 71121883 ID=Msa0222120-mRNA-1:cds;Parent=Msa0222120-mRNA-1
chr2_1 three_prime_UTR 71121852 71121882 71121852 ID=Msa0222120-mRNA-1:three_prime_utr;Parent=Msa0222120-mRNA-1
chr2_1 three_prime_UTR 71121664 71121823 71121664 ID=Msa0222120-mRNA-1:three_prime_utr;Parent=Msa0222120-mRNA-1
Gene Sequence

>Msa0222120

ATGGAGAGAGAGATAGAGATGAAGCTATCAAAGTTTAAGAGAATTTGTGTGTTTTGTGGTAGTAGCCCTGGTAACAAAACTAGCTATAAGGATGCTGCTATTGAACTTGGAAAAGAATTGGTTTCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCCCAAGCTGTTTATGATGGTGGTCGACATGTAATTGGAGTGATTCCCAAAACACTAATGCCAAGAGAGCTTACTGGTGAAACAGTAGGAGAAGTGAAAGCAGTAGCTGACATGCATCAAAGGAAAGCTGAAATGGCTAGAAATTCTGATGCCTTTATAGCCTTACCAGGTGGGTATGGGACACTTGAGGAGCTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATTCCTTTTTGACTTTCATCGACAAAGCTGTGGAGGAAGGATTCATTAGCCCCACAGCTCGCCATATAATTGTGTCTGCACCAACACCAAAAGAGCTTGTCAAAAATATGGAGGAGTATTTCCCACAGCATGAAAGAGTTGCCTCCAAGCTAAGCTGGGAAAATGAACAGCTAGATTAG

Protein sequence

>Msa0222120

MEREIEMKLSKFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMARNSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLTFIDKAVEEGFISPTARHIIVSAPTPKELVKNMEEYFPQHERVASKLSWENEQLD*