Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589750 | XP_003604729.1 | 98.198 | 222 | 3 | 1 | 1 | 222 | 1 | 221 | 3.33e-154 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589750 | sp|Q9SFF9|GL17_ARATH | 64.602 | 226 | 71 | 5 | 4 | 222 | 5 | 228 | 1.26e-93 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012820 | Msa0589750 | 0.802166 | 6.381602e-49 | -8.615850e-47 |
| Msa0031650 | Msa0589750 | 0.826606 | 2.473804e-54 | -8.615850e-47 |
| Msa0036580 | Msa0589750 | 0.831348 | 1.756958e-55 | -8.615850e-47 |
| Msa0041270 | Msa0589750 | 0.808518 | 2.978359e-50 | -8.615850e-47 |
| Msa0057740 | Msa0589750 | -0.802107 | 6.562928e-49 | -8.615850e-47 |
| Msa0059880 | Msa0589750 | 0.812104 | 5.013891e-51 | -8.615850e-47 |
| Msa0061600 | Msa0589750 | 0.815436 | 9.252997e-52 | -8.615850e-47 |
| Msa0085710 | Msa0589750 | 0.814964 | 1.178086e-51 | -8.615850e-47 |
| Msa0093530 | Msa0589750 | 0.824938 | 6.154330e-54 | -8.615850e-47 |
| Msa0096860 | Msa0589750 | 0.806136 | 9.523207e-50 | -8.615850e-47 |
| Msa0103060 | Msa0589750 | -0.802894 | 4.516689e-49 | -8.615850e-47 |
| Msa0106130 | Msa0589750 | 0.812409 | 4.301762e-51 | -8.615850e-47 |
| Msa0126960 | Msa0589750 | 0.823830 | 1.121223e-53 | -8.615850e-47 |
| Msa0139270 | Msa0589750 | 0.834907 | 2.284132e-56 | -8.615850e-47 |
| Msa0150910 | Msa0589750 | 0.811363 | 7.269061e-51 | -8.615850e-47 |
| Msa0160580 | Msa0589750 | 0.813745 | 2.190955e-51 | -8.615850e-47 |
| Msa0171740 | Msa0589750 | 0.827722 | 1.336896e-54 | -8.615850e-47 |
| Msa0176620 | Msa0589750 | 0.843831 | 1.100298e-58 | -8.615850e-47 |
| Msa0197750 | Msa0589750 | 0.816832 | 4.513014e-52 | -8.615850e-47 |
| Msa0199860 | Msa0589750 | 0.817289 | 3.561808e-52 | -8.615850e-47 |
| Msa0207970 | Msa0589750 | 0.802079 | 6.651440e-49 | -8.615850e-47 |
| Msa0225910 | Msa0589750 | 0.836117 | 1.128885e-56 | -8.615850e-47 |
| Msa0234120 | Msa0589750 | 0.839050 | 1.998216e-57 | -8.615850e-47 |
| Msa0234130 | Msa0589750 | 0.800226 | 1.591852e-48 | -8.615850e-47 |
| Msa0236610 | Msa0589750 | 0.850239 | 1.931540e-60 | -8.615850e-47 |
| Msa0393900 | Msa0589750 | 0.801761 | 7.731129e-49 | -8.615850e-47 |
| Msa0398690 | Msa0589750 | 0.802987 | 4.321131e-49 | -8.615850e-47 |
| Msa0409250 | Msa0589750 | 0.806384 | 8.443604e-50 | -8.615850e-47 |
| Msa0409490 | Msa0589750 | 0.811727 | 6.059426e-51 | -8.615850e-47 |
| Msa0414480 | Msa0589750 | 0.820562 | 6.423765e-53 | -8.615850e-47 |
| Msa0418150 | Msa0589750 | 0.837018 | 6.656155e-57 | -8.615850e-47 |
| Msa0418160 | Msa0589750 | 0.802872 | 4.564103e-49 | -8.615850e-47 |
| Msa0444400 | Msa0589750 | 0.806814 | 6.850358e-50 | -8.615850e-47 |
| Msa0445530 | Msa0589750 | 0.804220 | 2.398581e-49 | -8.615850e-47 |
| Msa0453970 | Msa0589750 | 0.809764 | 1.610327e-50 | -8.615850e-47 |
| Msa0464300 | Msa0589750 | 0.855096 | 7.932260e-62 | -8.615850e-47 |
| Msa0464310 | Msa0589750 | 0.824520 | 7.719195e-54 | -8.615850e-47 |
| Msa0242390 | Msa0589750 | 0.812473 | 4.164752e-51 | -8.615850e-47 |
| Msa0243970 | Msa0589750 | 0.802180 | 6.339147e-49 | -8.615850e-47 |
| Msa0243990 | Msa0589750 | 0.807897 | 4.039194e-50 | -8.615850e-47 |
| Msa0245660 | Msa0589750 | 0.816945 | 4.257122e-52 | -8.615850e-47 |
| Msa0266640 | Msa0589750 | 0.888763 | 4.425002e-73 | -8.615850e-47 |
| Msa0266650 | Msa0589750 | 0.883443 | 4.466218e-71 | -8.615850e-47 |
| Msa0274250 | Msa0589750 | 0.800841 | 1.192751e-48 | -8.615850e-47 |
| Msa0274260 | Msa0589750 | 0.811708 | 6.116222e-51 | -8.615850e-47 |
| Msa0277280 | Msa0589750 | 0.805654 | 1.202819e-49 | -8.615850e-47 |
| Msa0278950 | Msa0589750 | 0.830431 | 2.947587e-55 | -8.615850e-47 |
| Msa0295520 | Msa0589750 | -0.816089 | 6.619702e-52 | -8.615850e-47 |
| Msa0297650 | Msa0589750 | 0.837145 | 6.176407e-57 | -8.615850e-47 |
| Msa0315300 | Msa0589750 | 0.836876 | 7.237811e-57 | -8.615850e-47 |
| Msa0318370 | Msa0589750 | 0.843047 | 1.781475e-58 | -8.615850e-47 |
| Msa0322460 | Msa0589750 | 0.809510 | 1.825854e-50 | -8.615850e-47 |
| Msa0331780 | Msa0589750 | -0.801065 | 1.073636e-48 | -8.615850e-47 |
| Msa0356200 | Msa0589750 | 0.859501 | 3.960775e-63 | -8.615850e-47 |
| Msa0356250 | Msa0589750 | 0.847600 | 1.043765e-59 | -8.615850e-47 |
| Msa0356320 | Msa0589750 | 0.821605 | 3.693419e-53 | -8.615850e-47 |
| Msa0356380 | Msa0589750 | 0.845638 | 3.583505e-59 | -8.615850e-47 |
| Msa0356410 | Msa0589750 | 0.851571 | 8.136810e-61 | -8.615850e-47 |
| Msa0493710 | Msa0589750 | 0.820316 | 7.314142e-53 | -8.615850e-47 |
| Msa0532610 | Msa0589750 | 0.809743 | 1.627363e-50 | -8.615850e-47 |
| Msa0532670 | Msa0589750 | 0.809333 | 1.992952e-50 | -8.615850e-47 |
| Msa0532680 | Msa0589750 | 0.812479 | 4.153975e-51 | -8.615850e-47 |
| Msa0533510 | Msa0589750 | 0.887042 | 2.018880e-72 | -8.615850e-47 |
| Msa0533520 | Msa0589750 | 0.883110 | 5.921072e-71 | -8.615850e-47 |
| Msa0538440 | Msa0589750 | 0.837148 | 6.165938e-57 | -8.615850e-47 |
| Msa0538450 | Msa0589750 | 0.835010 | 2.151286e-56 | -8.615850e-47 |
| Msa0538520 | Msa0589750 | 0.826126 | 3.218935e-54 | -8.615850e-47 |
| Msa0538530 | Msa0589750 | 0.833765 | 4.418621e-56 | -8.615850e-47 |
| Msa0543740 | Msa0589750 | 0.800825 | 1.201725e-48 | -8.615850e-47 |
| Msa0548760 | Msa0589750 | 0.812428 | 4.261860e-51 | -8.615850e-47 |
| Msa0548770 | Msa0589750 | 0.806205 | 9.212573e-50 | -8.615850e-47 |
| Msa0554660 | Msa0589750 | 0.818859 | 1.573037e-52 | -8.615850e-47 |
| Msa0589720 | Msa0589750 | 0.895109 | 1.309829e-75 | -8.615850e-47 |
| Msa0589730 | Msa0589750 | 0.883209 | 5.443605e-71 | -8.615850e-47 |
| Msa0589740 | Msa0589750 | 0.854411 | 1.252817e-61 | -8.615850e-47 |
| Msa0589750 | Msa0594320 | 0.803874 | 2.831114e-49 | -8.615850e-47 |
| Msa0589750 | Msa0594330 | 0.842108 | 3.163216e-58 | -8.615850e-47 |
| Msa0589750 | Msa0603800 | 0.829322 | 5.492353e-55 | -8.615850e-47 |
| Msa0589750 | Msa0604280 | 0.808077 | 3.697736e-50 | -8.615850e-47 |
| Msa0589750 | Msa0623750 | 0.818812 | 1.612678e-52 | -8.615850e-47 |
| Msa0589750 | Msa0630130 | 0.900822 | 4.986512e-78 | -8.615850e-47 |
| Msa0589750 | Msa0634290 | 0.831853 | 1.318987e-55 | -8.615850e-47 |
| Msa0589750 | Msa0640290 | 0.823118 | 1.645412e-53 | -8.615850e-47 |
| Msa0589750 | Msa0645100 | 0.816608 | 5.064805e-52 | -8.615850e-47 |
| Msa0589750 | Msa0645120 | 0.825226 | 5.261151e-54 | -8.615850e-47 |
| Msa0589750 | Msa0665910 | 0.806847 | 6.743546e-50 | -8.615850e-47 |
| Msa0589750 | Msa0667640 | 0.811837 | 5.731912e-51 | -8.615850e-47 |
| Msa0589750 | Msa0668210 | 0.882833 | 7.474291e-71 | -8.615850e-47 |
| Msa0589750 | Msa0668220 | 0.841509 | 4.552704e-58 | -8.615850e-47 |
| Msa0589750 | Msa0668230 | 0.850772 | 1.368124e-60 | -8.615850e-47 |
| Msa0589750 | Msa0671490 | 0.805084 | 1.583565e-49 | -8.615850e-47 |
| Msa0589750 | Msa0672780 | 0.805416 | 1.349213e-49 | -8.615850e-47 |
| Msa0589750 | Msa0678620 | 0.803576 | 3.263194e-49 | -8.615850e-47 |
| Msa0589750 | Msa0684590 | 0.819328 | 1.230491e-52 | -8.615850e-47 |
| Msa0589750 | Msa0684600 | 0.820427 | 6.898262e-53 | -8.615850e-47 |
| Msa0589750 | Msa0711240 | 0.826164 | 3.153224e-54 | -8.615850e-47 |
| Msa0589750 | Msa0715260 | 0.830018 | 3.719922e-55 | -8.615850e-47 |
| Msa0589750 | Msa0727480 | 0.802028 | 6.812047e-49 | -8.615850e-47 |
| Msa0589750 | Msa0728520 | 0.841615 | 4.268082e-58 | -8.615850e-47 |
| Msa0589750 | Msa0730890 | 0.803090 | 4.115208e-49 | -8.615850e-47 |
| Msa0589750 | Msa0735280 | 0.807792 | 4.250388e-50 | -8.615850e-47 |
| Msa0589750 | Msa0738570 | 0.811625 | 6.376175e-51 | -8.615850e-47 |
| Msa0589750 | Msa0738660 | 0.813790 | 2.141332e-51 | -8.615850e-47 |
| Msa0589750 | Msa0757240 | 0.829709 | 4.423266e-55 | -8.615850e-47 |
| Msa0589750 | Msa0758150 | 0.819337 | 1.224865e-52 | -8.615850e-47 |
| Msa0589750 | Msa0776540 | 0.840939 | 6.427713e-58 | -8.615850e-47 |
| Msa0589750 | Msa0777070 | 0.800369 | 1.488328e-48 | -8.615850e-47 |
| Msa0589750 | Msa0792330 | 0.807922 | 3.989216e-50 | -8.615850e-47 |
| Msa0589750 | Msa0793060 | -0.812133 | 4.941614e-51 | -8.615850e-47 |
| Msa0589750 | Msa0798230 | 0.826901 | 2.103498e-54 | -8.615850e-47 |
| Msa0589750 | Msa0817100 | 0.820260 | 7.534806e-53 | -8.615850e-47 |
| Msa0589750 | Msa0819110 | 0.810070 | 1.383934e-50 | -8.615850e-47 |
| Msa0589750 | Msa0824850 | 0.800133 | 1.662872e-48 | -8.615850e-47 |
| Msa0589750 | Msa0824860 | 0.827446 | 1.557193e-54 | -8.615850e-47 |
| Msa0589750 | Msa0836740 | 0.828604 | 8.198050e-55 | -8.615850e-47 |
| Msa0589750 | Msa0859230 | 0.824464 | 7.960640e-54 | -8.615850e-47 |
| Msa0589750 | Msa0863840 | 0.823868 | 1.098755e-53 | -8.615850e-47 |
| Msa0589750 | Msa0863850 | 0.828245 | 1.000733e-54 | -8.615850e-47 |
| Msa0589750 | Msa0863860 | 0.803247 | 3.819204e-49 | -8.615850e-47 |
| Msa0589750 | Msa0868820 | 0.815798 | 7.684662e-52 | -8.615850e-47 |
| Msa0589750 | Msa0868870 | 0.831967 | 1.236440e-55 | -8.615850e-47 |
| Msa0589750 | Msa0883610 | 0.820669 | 6.070893e-53 | -8.615850e-47 |
| Msa0589750 | Msa0886370 | 0.825032 | 5.847480e-54 | -8.615850e-47 |
| Msa0589750 | Msa0896920 | 0.852801 | 3.637942e-61 | -8.615850e-47 |
| Msa0589750 | Msa0896950 | 0.809220 | 2.107327e-50 | -8.615850e-47 |
| Msa0589750 | Msa0902340 | 0.801990 | 6.935261e-49 | -8.615850e-47 |
| Msa0589750 | Msa0910570 | 0.821540 | 3.823658e-53 | -8.615850e-47 |
| Msa0589750 | Msa0932890 | 0.809638 | 1.714123e-50 | -8.615850e-47 |
| Msa0589750 | Msa0932900 | 0.836388 | 9.633771e-57 | -8.615850e-47 |
| Msa0589750 | Msa0932910 | 0.824162 | 9.370084e-54 | -8.615850e-47 |
| Msa0589750 | Msa0932930 | 0.841328 | 5.079704e-58 | -8.615850e-47 |
| Msa0589750 | Msa0933580 | 0.824411 | 8.189889e-54 | -8.615850e-47 |
| Msa0589750 | Msa0933610 | 0.830114 | 3.523778e-55 | -8.615850e-47 |
| Msa0589750 | Msa0951060 | 0.848594 | 5.548032e-60 | -8.615850e-47 |
| Msa0589750 | Msa0962290 | 0.835790 | 1.366503e-56 | -8.615850e-47 |
| Msa0589750 | Msa0962320 | 0.800962 | 1.126644e-48 | -8.615850e-47 |
| Msa0589750 | Msa0970790 | 0.828837 | 7.201837e-55 | -8.615850e-47 |
| Msa0589750 | Msa0970820 | 0.800942 | 1.137392e-48 | -8.615850e-47 |
| Msa0589750 | Msa0985250 | 0.827362 | 1.631141e-54 | -8.615850e-47 |
| Msa0589750 | Msa0985260 | 0.801459 | 8.916178e-49 | -8.615850e-47 |
| Msa0589750 | Msa0985290 | 0.817756 | 2.795581e-52 | -8.615850e-47 |
| Msa0589750 | Msa0987550 | 0.808919 | 2.443886e-50 | -8.615850e-47 |
| Msa0589750 | Msa0996980 | 0.841668 | 4.132495e-58 | -8.615850e-47 |
| Msa0589750 | Msa1003240 | 0.804772 | 1.840044e-49 | -8.615850e-47 |
| Msa0589750 | Msa1006030 | 0.800492 | 1.405419e-48 | -8.615850e-47 |
| Msa0589750 | Msa1006170 | 0.807072 | 6.043424e-50 | -8.615850e-47 |
| Msa0589750 | Msa1024420 | 0.808619 | 2.833183e-50 | -8.615850e-47 |
| Msa0589750 | Msa1026050 | 0.810433 | 1.155643e-50 | -8.615850e-47 |
| Msa0589750 | Msa1046220 | 0.832949 | 7.057594e-56 | -8.615850e-47 |
| Msa0589750 | Msa1048390 | 0.819585 | 1.074834e-52 | -8.615850e-47 |
| Msa0589750 | Msa1061670 | 0.821024 | 5.030295e-53 | -8.615850e-47 |
| Msa0589750 | Msa1064940 | 0.829305 | 5.543695e-55 | -8.615850e-47 |
| Msa0589750 | Msa1069440 | -0.805010 | 1.641213e-49 | -8.615850e-47 |
| Msa0589750 | Msa1079610 | -0.800158 | 1.643340e-48 | -8.615850e-47 |
| Msa0589750 | Msa1083100 | 0.808752 | 2.654344e-50 | -8.615850e-47 |
| Msa0589750 | Msa1087380 | 0.804133 | 2.500418e-49 | -8.615850e-47 |
| Msa0589750 | Msa1098100 | 0.816556 | 5.204392e-52 | -8.615850e-47 |
| Msa0589750 | Msa1106960 | 0.816442 | 5.518573e-52 | -8.615850e-47 |
| Msa0589750 | Msa1109880 | 0.805593 | 1.238819e-49 | -8.615850e-47 |
| Msa0589750 | Msa1109890 | 0.822522 | 2.264381e-53 | -8.615850e-47 |
| Msa0589750 | Msa1110040 | 0.828082 | 1.095293e-54 | -8.615850e-47 |
| Msa0589750 | Msa1124440 | -0.811065 | 8.433567e-51 | -8.615850e-47 |
| Msa0589750 | Msa1138110 | 0.848477 | 5.980084e-60 | -8.615850e-47 |
| Msa0589750 | Msa1138600 | -0.812556 | 3.995364e-51 | -8.615850e-47 |
| Msa0589750 | Msa1153690 | 0.833305 | 5.757481e-56 | -8.615850e-47 |
| Msa0589750 | Msa1170340 | 0.801009 | 1.101943e-48 | -8.615850e-47 |
| Msa0589750 | Msa1173290 | 0.842651 | 2.270489e-58 | -8.615850e-47 |
| Msa0589750 | Msa1208910 | 0.812108 | 5.004146e-51 | -8.615850e-47 |
| Msa0589750 | Msa1211160 | 0.804121 | 2.515243e-49 | -8.615850e-47 |
| Msa0589750 | Msa1216120 | 0.833832 | 4.251313e-56 | -8.615850e-47 |
| Msa0589750 | Msa1216370 | 0.804025 | 2.632533e-49 | -8.615850e-47 |
| Msa0589750 | Msa1216600 | 0.806232 | 9.090100e-50 | -8.615850e-47 |
| Msa0589750 | Msa1219780 | 0.809865 | 1.531516e-50 | -8.615850e-47 |
| Msa0589750 | Msa1221170 | 0.831056 | 2.072405e-55 | -8.615850e-47 |
| Msa0589750 | Msa1246420 | -0.801952 | 7.062247e-49 | -8.615850e-47 |
| Msa0589750 | Msa1263000 | 0.810623 | 1.051424e-50 | -8.615850e-47 |
| Msa0589750 | Msa1265500 | 0.833902 | 4.082805e-56 | -8.615850e-47 |
| Msa0589750 | Msa1266710 | 0.800767 | 1.234893e-48 | -8.615850e-47 |
| Msa0589750 | Msa1296870 | 0.808717 | 2.699951e-50 | -8.615850e-47 |
| Msa0589750 | Msa1302010 | 0.823530 | 1.317854e-53 | -8.615850e-47 |
| Msa0589750 | Msa1323150 | 0.829869 | 4.043315e-55 | -8.615850e-47 |
| Msa0589750 | Msa1323160 | 0.801551 | 8.535835e-49 | -8.615850e-47 |
| Msa0589750 | Msa1349420 | 0.814342 | 1.618064e-51 | -8.615850e-47 |
| Msa0589750 | Msa1355330 | 0.842263 | 2.877153e-58 | -8.615850e-47 |
| Msa0589750 | Msa1355340 | 0.800290 | 1.545127e-48 | -8.615850e-47 |
| Msa0589750 | Msa1361500 | 0.815603 | 8.494885e-52 | -8.615850e-47 |
| Msa0589750 | Msa1370930 | 0.805006 | 1.644264e-49 | -8.615850e-47 |
| Msa0589750 | Msa1378950 | 0.826926 | 2.075201e-54 | -8.615850e-47 |
| Msa0589750 | Msa1382180 | 0.836818 | 7.488289e-57 | -8.615850e-47 |
| Msa0589750 | Msa1390040 | 0.801692 | 7.987706e-49 | -8.615850e-47 |
| Msa0589750 | Msa1393440 | 0.818487 | 1.910846e-52 | -8.615850e-47 |
| Msa0589750 | Msa1395690 | 0.842853 | 2.005953e-58 | -8.615850e-47 |
| Msa0589750 | Msa1407210 | 0.800816 | 1.206853e-48 | -8.615850e-47 |
| Msa0589750 | Msa1411550 | 0.812567 | 3.972823e-51 | -8.615850e-47 |
| Msa0589750 | Msa1441300 | 0.806347 | 8.597051e-50 | -8.615850e-47 |
| Msa0589750 | Msa1445780 | 0.802113 | 6.542975e-49 | -8.615850e-47 |
| Msa0589750 | Msa1448150 | 0.913517 | 5.613646e-84 | -8.615850e-47 |
| Msa0589750 | Msa1456600 | 0.825420 | 4.733814e-54 | -8.615850e-47 |
| Msa0589750 | Msa1459610 | 0.818453 | 1.945091e-52 | -8.615850e-47 |
| Msa0589750 | Msa1459970 | 0.800647 | 1.306625e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589750 | MtrunA17_Chr4g0007031 | 98.198 | 222 | 3 | 1 | 1 | 222 | 1 | 221 | 3.06e-158 | 436 |
| Msa0589750 | MtrunA17_Chr5g0419971 | 98.198 | 222 | 3 | 1 | 1 | 222 | 1 | 221 | 3.06e-158 | 436 |
| Msa0589750 | MtrunA17_Chr5g0419981 | 98.198 | 222 | 3 | 1 | 1 | 222 | 1 | 221 | 3.06e-158 | 436 |
| Msa0589750 | MtrunA17_Chr4g0007051 | 97.748 | 222 | 4 | 1 | 1 | 222 | 1 | 221 | 1.05e-157 | 435 |
| Msa0589750 | MtrunA17_Chr2g0285871 | 95.946 | 222 | 8 | 1 | 1 | 222 | 1 | 221 | 4.92e-156 | 431 |
| Msa0589750 | MtrunA17_Chr4g0007041 | 96.396 | 222 | 7 | 1 | 1 | 222 | 1 | 221 | 5.38e-156 | 431 |
| Msa0589750 | MtrunA17_Chr1g0189841 | 79.372 | 223 | 44 | 2 | 1 | 222 | 1 | 222 | 5.50e-127 | 357 |
| Msa0589750 | MtrunA17_Chr6g0449771 | 76.712 | 219 | 48 | 2 | 4 | 222 | 5 | 220 | 3.38e-117 | 333 |
| Msa0589750 | MtrunA17_Chr6g0449751 | 76.233 | 223 | 49 | 3 | 1 | 222 | 1 | 220 | 5.07e-117 | 332 |
| Msa0589750 | MtrunA17_Chr6g0449731 | 76.606 | 218 | 48 | 2 | 4 | 221 | 5 | 219 | 1.31e-116 | 331 |
| Msa0589750 | MtrunA17_Chr6g0449761 | 74.312 | 218 | 54 | 1 | 1 | 218 | 1 | 216 | 2.32e-114 | 327 |
| Msa0589750 | MtrunA17_Chr6g0449781 | 63.182 | 220 | 77 | 3 | 3 | 222 | 4 | 219 | 1.10e-90 | 265 |
| Msa0589750 | MtrunA17_Chr6g0449791 | 60.766 | 209 | 81 | 1 | 1 | 209 | 1 | 208 | 6.69e-87 | 256 |
| Msa0589750 | MtrunA17_Chr1g0156131 | 58.716 | 218 | 78 | 3 | 1 | 216 | 1 | 208 | 6.21e-80 | 238 |
| Msa0589750 | MtrunA17_Chr2g0292831 | 59.701 | 201 | 70 | 4 | 19 | 216 | 19 | 211 | 1.06e-76 | 230 |
| Msa0589750 | MtrunA17_Chr2g0292901 | 58.911 | 202 | 71 | 5 | 19 | 216 | 19 | 212 | 2.56e-72 | 219 |
| Msa0589750 | MtrunA17_Chr2g0292861 | 63.218 | 174 | 57 | 4 | 47 | 216 | 7 | 177 | 3.62e-70 | 212 |
| Msa0589750 | MtrunA17_Chr2g0292841 | 62.644 | 174 | 58 | 4 | 47 | 216 | 7 | 177 | 2.86e-68 | 207 |
| Msa0589750 | MtrunA17_Chr1g0193671 | 46.262 | 214 | 107 | 3 | 5 | 216 | 6 | 213 | 4.48e-61 | 190 |
| Msa0589750 | MtrunA17_Chr1g0193421 | 46.269 | 201 | 100 | 3 | 18 | 216 | 20 | 214 | 1.88e-54 | 173 |
| Msa0589750 | MtrunA17_Chr7g0271211 | 47.716 | 197 | 95 | 3 | 22 | 216 | 20 | 210 | 6.56e-53 | 169 |
| Msa0589750 | MtrunA17_Chr5g0414971 | 45.455 | 198 | 99 | 4 | 22 | 216 | 27 | 218 | 1.12e-48 | 159 |
| Msa0589750 | MtrunA17_Chr2g0292911 | 64.463 | 121 | 37 | 3 | 47 | 164 | 7 | 124 | 3.42e-46 | 150 |
| Msa0589750 | MtrunA17_Chr1g0210761 | 41.500 | 200 | 102 | 5 | 19 | 216 | 20 | 206 | 2.96e-44 | 147 |
| Msa0589750 | MtrunA17_Chr1g0178711 | 36.036 | 222 | 129 | 5 | 2 | 216 | 5 | 220 | 5.47e-41 | 139 |
| Msa0589750 | MtrunA17_Chr2g0300561 | 40.845 | 213 | 108 | 5 | 4 | 214 | 7 | 203 | 1.41e-40 | 137 |
| Msa0589750 | MtrunA17_Chr2g0300581 | 37.850 | 214 | 115 | 5 | 4 | 215 | 7 | 204 | 2.43e-38 | 132 |
| Msa0589750 | MtrunA17_Chr2g0300591 | 38.028 | 213 | 114 | 5 | 4 | 214 | 7 | 203 | 2.65e-38 | 132 |
| Msa0589750 | MtrunA17_Chr8g0335851 | 40.299 | 201 | 106 | 4 | 22 | 220 | 26 | 214 | 1.40e-36 | 127 |
| Msa0589750 | MtrunA17_Chr8g0344021 | 40.404 | 198 | 97 | 5 | 1 | 191 | 1 | 184 | 2.29e-35 | 124 |
| Msa0589750 | MtrunA17_Chr8g0343934 | 40.110 | 182 | 95 | 5 | 1 | 180 | 1 | 170 | 9.14e-34 | 120 |
| Msa0589750 | MtrunA17_Chr3g0084531 | 40.500 | 200 | 104 | 6 | 1 | 198 | 1 | 187 | 1.29e-33 | 120 |
| Msa0589750 | MtrunA17_Chr8g0343911 | 36.866 | 217 | 119 | 6 | 1 | 215 | 2 | 202 | 2.55e-33 | 119 |
| Msa0589750 | MtrunA17_Chr2g0297231 | 37.736 | 212 | 115 | 6 | 1 | 207 | 1 | 200 | 3.23e-32 | 116 |
| Msa0589750 | MtrunA17_Chr2g0297241 | 37.736 | 212 | 115 | 6 | 1 | 207 | 1 | 200 | 3.96e-32 | 116 |
| Msa0589750 | MtrunA17_Chr2g0313961 | 37.264 | 212 | 116 | 6 | 1 | 207 | 1 | 200 | 1.73e-31 | 114 |
| Msa0589750 | MtrunA17_Chr8g0344051 | 41.111 | 180 | 93 | 4 | 1 | 177 | 1 | 170 | 3.09e-31 | 114 |
| Msa0589750 | MtrunA17_Chr8g0343954 | 35.321 | 218 | 125 | 6 | 1 | 216 | 1 | 204 | 3.67e-31 | 113 |
| Msa0589750 | MtrunA17_Chr8g0343961 | 34.404 | 218 | 127 | 6 | 1 | 216 | 1 | 204 | 2.16e-30 | 111 |
| Msa0589750 | MtrunA17_Chr3g0084511 | 38.119 | 202 | 105 | 7 | 1 | 198 | 1 | 186 | 4.79e-30 | 110 |
| Msa0589750 | MtrunA17_Chr3g0084521 | 38.119 | 202 | 105 | 7 | 1 | 198 | 1 | 186 | 4.84e-30 | 110 |
| Msa0589750 | MtrunA17_Chr2g0301611 | 37.778 | 180 | 98 | 5 | 1 | 178 | 1 | 168 | 1.19e-29 | 109 |
| Msa0589750 | MtrunA17_Chr3g0130241 | 38.764 | 178 | 102 | 3 | 5 | 180 | 72 | 244 | 1.58e-29 | 111 |
| Msa0589750 | MtrunA17_Chr2g0321601 | 34.404 | 218 | 116 | 7 | 2 | 215 | 7 | 201 | 3.45e-29 | 108 |
| Msa0589750 | MtrunA17_Chr2g0321581 | 43.182 | 132 | 68 | 3 | 85 | 215 | 77 | 202 | 1.06e-28 | 107 |
| Msa0589750 | MtrunA17_Chr2g0302171 | 38.889 | 180 | 96 | 5 | 1 | 178 | 1 | 168 | 1.07e-28 | 107 |
| Msa0589750 | MtrunA17_Chr4g0026191 | 34.862 | 218 | 114 | 7 | 3 | 215 | 9 | 203 | 1.29e-28 | 107 |
| Msa0589750 | MtrunA17_Chr4g0026201 | 36.585 | 205 | 103 | 6 | 16 | 215 | 21 | 203 | 1.46e-28 | 106 |
| Msa0589750 | MtrunA17_Chr2g0321591 | 42.424 | 132 | 69 | 3 | 85 | 215 | 77 | 202 | 3.56e-28 | 105 |
| Msa0589750 | MtrunA17_Chr5g0411961 | 35.071 | 211 | 122 | 5 | 1 | 207 | 1 | 200 | 1.25e-27 | 104 |
| Msa0589750 | MtrunA17_Chr2g0302541 | 36.321 | 212 | 118 | 6 | 1 | 207 | 1 | 200 | 1.25e-27 | 104 |
| Msa0589750 | MtrunA17_Chr8g0344031 | 34.404 | 218 | 129 | 6 | 1 | 216 | 1 | 206 | 2.35e-26 | 101 |
| Msa0589750 | MtrunA17_Chr8g0344041 | 34.826 | 201 | 117 | 5 | 13 | 207 | 12 | 204 | 6.66e-26 | 100 |
| Msa0589750 | MtrunA17_Chr7g0217811 | 35.849 | 212 | 119 | 6 | 1 | 207 | 1 | 200 | 1.48e-25 | 99.0 |
| Msa0589750 | MtrunA17_Chr4g0003361 | 35.160 | 219 | 116 | 8 | 2 | 216 | 4 | 200 | 2.31e-25 | 98.6 |
| Msa0589750 | MtrunA17_Chr4g0012651 | 35.849 | 212 | 119 | 6 | 1 | 207 | 1 | 200 | 4.26e-25 | 97.8 |
| Msa0589750 | MtrunA17_Chr2g0286171 | 32.727 | 220 | 131 | 7 | 1 | 216 | 1 | 207 | 8.77e-25 | 97.1 |
| Msa0589750 | MtrunA17_Chr8g0343921 | 33.333 | 216 | 126 | 7 | 1 | 214 | 1 | 200 | 3.13e-24 | 95.5 |
| Msa0589750 | MtrunA17_Chr3g0115141 | 34.896 | 192 | 109 | 6 | 28 | 216 | 27 | 205 | 3.96e-24 | 95.5 |
| Msa0589750 | MtrunA17_Chr2g0292881 | 64.407 | 59 | 19 | 1 | 93 | 151 | 1 | 57 | 3.86e-20 | 80.5 |
| Msa0589750 | MtrunA17_Chr3g0084551 | 33.981 | 206 | 113 | 9 | 1 | 203 | 1 | 186 | 6.23e-19 | 82.0 |
| Msa0589750 | MtrunA17_Chr3g0084501 | 38.393 | 112 | 60 | 4 | 1 | 110 | 1 | 105 | 3.23e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0589750 | AT3G05950.1 | 64.602 | 226 | 71 | 5 | 4 | 222 | 5 | 228 | 1.28e-94 | 276 |
| Msa0589750 | AT5G39150.1 | 62.557 | 219 | 78 | 3 | 1 | 216 | 1 | 218 | 3.67e-92 | 270 |
| Msa0589750 | AT5G39180.1 | 62.557 | 219 | 78 | 3 | 1 | 216 | 1 | 218 | 8.24e-92 | 269 |
| Msa0589750 | AT5G39120.1 | 63.679 | 212 | 73 | 3 | 7 | 216 | 9 | 218 | 1.17e-91 | 268 |
| Msa0589750 | AT5G39110.1 | 63.208 | 212 | 75 | 2 | 7 | 216 | 9 | 219 | 4.87e-90 | 264 |
| Msa0589750 | AT5G39160.1 | 63.182 | 220 | 75 | 4 | 1 | 216 | 1 | 218 | 5.14e-90 | 264 |
| Msa0589750 | AT5G39190.1 | 63.182 | 220 | 75 | 4 | 1 | 216 | 1 | 218 | 9.49e-90 | 263 |
| Msa0589750 | AT5G39130.1 | 63.810 | 210 | 72 | 3 | 9 | 216 | 11 | 218 | 2.89e-89 | 262 |
| Msa0589750 | AT5G39160.3 | 60.909 | 220 | 76 | 4 | 1 | 216 | 1 | 214 | 3.27e-85 | 252 |
| Msa0589750 | AT4G14630.1 | 59.545 | 220 | 84 | 3 | 1 | 216 | 3 | 221 | 4.45e-85 | 252 |
| Msa0589750 | AT3G04200.1 | 59.722 | 216 | 83 | 4 | 1 | 214 | 6 | 219 | 1.46e-82 | 246 |
| Msa0589750 | AT5G38910.1 | 59.276 | 221 | 82 | 4 | 1 | 216 | 1 | 218 | 6.84e-79 | 236 |
| Msa0589750 | AT5G39190.2 | 57.339 | 218 | 69 | 3 | 1 | 216 | 1 | 196 | 1.16e-77 | 232 |
| Msa0589750 | AT5G38940.1 | 60.406 | 197 | 74 | 2 | 22 | 216 | 26 | 220 | 1.35e-77 | 233 |
| Msa0589750 | AT5G38930.1 | 61.307 | 199 | 73 | 2 | 20 | 216 | 24 | 220 | 1.35e-77 | 233 |
| Msa0589750 | AT5G38940.2 | 60.406 | 197 | 74 | 2 | 22 | 216 | 50 | 244 | 2.00e-77 | 233 |
| Msa0589750 | AT5G39160.2 | 56.881 | 218 | 70 | 3 | 1 | 216 | 1 | 196 | 3.06e-77 | 231 |
| Msa0589750 | AT5G38960.1 | 59.406 | 202 | 77 | 3 | 18 | 216 | 22 | 221 | 4.34e-77 | 231 |
| Msa0589750 | AT3G04170.1 | 55.238 | 210 | 87 | 4 | 8 | 215 | 12 | 216 | 8.99e-73 | 221 |
| Msa0589750 | AT3G04150.1 | 53.670 | 218 | 94 | 4 | 3 | 215 | 4 | 219 | 2.85e-72 | 219 |
| Msa0589750 | AT3G04190.1 | 55.446 | 202 | 86 | 3 | 15 | 214 | 19 | 218 | 3.30e-72 | 219 |
| Msa0589750 | AT3G04150.2 | 50.870 | 230 | 95 | 4 | 3 | 215 | 4 | 232 | 1.93e-70 | 215 |
| Msa0589750 | AT3G04180.1 | 53.960 | 202 | 89 | 3 | 15 | 214 | 19 | 218 | 3.28e-69 | 211 |
| Msa0589750 | AT1G02335.1 | 43.721 | 215 | 113 | 3 | 4 | 216 | 6 | 214 | 8.76e-57 | 180 |
| Msa0589750 | AT3G62020.1 | 46.262 | 214 | 105 | 5 | 6 | 216 | 8 | 214 | 1.25e-55 | 177 |
| Msa0589750 | AT5G38910.2 | 48.416 | 221 | 69 | 4 | 1 | 216 | 1 | 181 | 2.68e-55 | 175 |
| Msa0589750 | AT3G05930.1 | 47.549 | 204 | 97 | 4 | 3 | 203 | 5 | 201 | 1.27e-53 | 172 |
| Msa0589750 | AT1G09560.1 | 45.050 | 202 | 103 | 3 | 17 | 216 | 19 | 214 | 1.72e-53 | 171 |
| Msa0589750 | AT5G26700.1 | 49.457 | 184 | 78 | 5 | 26 | 205 | 25 | 197 | 3.37e-51 | 165 |
| Msa0589750 | AT1G18970.1 | 45.274 | 201 | 100 | 4 | 18 | 216 | 25 | 217 | 7.10e-50 | 162 |
| Msa0589750 | AT1G18980.1 | 45.771 | 201 | 99 | 4 | 18 | 216 | 25 | 217 | 1.24e-48 | 159 |
| Msa0589750 | AT3G62020.2 | 46.961 | 181 | 89 | 3 | 39 | 216 | 9 | 185 | 5.46e-48 | 156 |
| Msa0589750 | AT1G10460.1 | 41.709 | 199 | 107 | 5 | 22 | 215 | 19 | 213 | 5.68e-45 | 149 |
| Msa0589750 | AT3G10080.1 | 39.409 | 203 | 113 | 5 | 18 | 216 | 22 | 218 | 1.75e-43 | 146 |
| Msa0589750 | AT3G10080.2 | 39.409 | 203 | 113 | 5 | 18 | 216 | 93 | 289 | 9.53e-43 | 146 |
| Msa0589750 | AT5G61750.1 | 41.398 | 186 | 103 | 2 | 4 | 187 | 1 | 182 | 2.05e-40 | 137 |
| Msa0589750 | AT5G20630.1 | 40.758 | 211 | 112 | 6 | 1 | 209 | 1 | 200 | 3.54e-40 | 137 |
| Msa0589750 | AT1G72610.1 | 40.314 | 191 | 104 | 6 | 26 | 214 | 19 | 201 | 8.10e-33 | 118 |
| Msa0589750 | AT1G74820.1 | 39.175 | 194 | 108 | 4 | 25 | 216 | 39 | 224 | 8.20e-33 | 118 |
| Msa0589750 | AT5G38950.1 | 54.167 | 72 | 33 | 0 | 146 | 217 | 2 | 73 | 1.33e-18 | 78.2 |
Find 58 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATACATACCACCATCTT+TGG | 0.255130 | 4_2:+12998901 | None:intergenic |
| CCTTGTTAGCATCTTGGCTT+TGG | 0.311083 | 4_2:-12998990 | Msa0589750:CDS |
| TTGAGAGCCTAGTGCGTTAG+AGG | 0.314204 | 4_2:+12997748 | None:intergenic |
| CTTATCCACTTGAAAAGCTT+TGG | 0.335788 | 4_2:+12997349 | None:intergenic |
| CAACACACTTGGGATATCTT+TGG | 0.340651 | 4_2:-12997690 | Msa0589750:CDS |
| ACCATCTTTGGGGTCTTTGA+TGG | 0.343346 | 4_2:+12998913 | None:intergenic |
| TGAAAATGAATAAGACCAAT+TGG | 0.356438 | 4_2:+12997494 | None:intergenic |
| GACTGCCTTCAAGTACTATA+AGG | 0.359669 | 4_2:+12997603 | None:intergenic |
| ACGATTGTTGTTGTCTTGAT+TGG | 0.375547 | 4_2:+12997559 | None:intergenic |
| ATACTTCCTTGTTAGCATCT+TGG | 0.401215 | 4_2:-12998996 | Msa0589750:CDS |
| TTCTTCAAACATGTTGAAGC+TGG | 0.402098 | 4_2:-12997776 | Msa0589750:CDS |
| ATATACATACCACCATCTTT+GGG | 0.405165 | 4_2:+12998902 | None:intergenic |
| GGCAACGCTGTTGCTATTGC+TGG | 0.408860 | 4_2:-12997455 | Msa0589750:CDS |
| AATTTGCAGTGTTTGTGAAC+GGG | 0.408992 | 4_2:-12997838 | Msa0589750:intron |
| CAAAAGTCTTGGAGAGGGCT+GGG | 0.429933 | 4_2:+12998941 | None:intergenic |
| ATTATCTTCAAAAGCAGTCT+TGG | 0.442184 | 4_2:-12997316 | Msa0589750:CDS |
| GTCACTGTAGACCAACTATT+CGG | 0.446134 | 4_2:-12997716 | Msa0589750:CDS |
| GATGTGTTTGTGTTCCCAAT+TGG | 0.446317 | 4_2:-12997509 | Msa0589750:CDS |
| ACAAAAGTCTTGGAGAGGGC+TGG | 0.468953 | 4_2:+12998940 | None:intergenic |
| TTTGCAACGGTGATAACTCC+TGG | 0.470922 | 4_2:+12997416 | None:intergenic |
| ATAAGGATTTCCGTTCCTCT+AGG | 0.478305 | 4_2:+12997620 | None:intergenic |
| GAAATCCTTATAGTACTTGA+AGG | 0.481512 | 4_2:-12997608 | Msa0589750:CDS |
| TCTTCAGCTTTAACTAGCGC+GGG | 0.484814 | 4_2:+12997800 | None:intergenic |
| CTTGAAGGCAGTCTTTATGT+TGG | 0.489113 | 4_2:-12997593 | Msa0589750:CDS |
| CTCTAGGGTGAATGTGAGGT+GGG | 0.498933 | 4_2:+12997636 | None:intergenic |
| TGATGGCAACACAAAAGTCT+TGG | 0.500181 | 4_2:+12998930 | None:intergenic |
| TCTTCAAACATGTTGAAGCT+GGG | 0.501315 | 4_2:-12997775 | Msa0589750:CDS |
| GAAAATGAATAAGACCAATT+GGG | 0.510497 | 4_2:+12997495 | None:intergenic |
| AGAACTTCGTCGGAAATAAG+AGG | 0.511108 | 4_2:+12997374 | None:intergenic |
| CTATTCGGACTCAACACACT+TGG | 0.521532 | 4_2:-12997701 | Msa0589750:CDS |
| TGAGGTGGGTTTAAACCCTT+AGG | 0.539104 | 4_2:+12997650 | None:intergenic |
| TTTCAACTGAATGTGGGCTA+TGG | 0.539971 | 4_2:-12997476 | Msa0589750:CDS |
| GTGTGTTGAGTCCGAATAGT+TGG | 0.540274 | 4_2:+12997705 | None:intergenic |
| ATCTTCAGCTTTAACTAGCG+CGG | 0.543736 | 4_2:+12997799 | None:intergenic |
| TAAGGATTTCCGTTCCTCTA+GGG | 0.546102 | 4_2:+12997621 | None:intergenic |
| TAATTTGCAGTGTTTGTGAA+CGG | 0.551349 | 4_2:-12997839 | Msa0589750:intron |
| GCCATCAAAGACCCCAAAGA+TGG | 0.552100 | 4_2:-12998914 | Msa0589750:CDS |
| AGCTTTGGTAAGAACTTCGT+CGG | 0.555884 | 4_2:+12997364 | None:intergenic |
| CCAAAGCCAAGATGCTAACA+AGG | 0.556137 | 4_2:+12998990 | None:intergenic |
| AAAAGTCTTGGAGAGGGCTG+GGG | 0.564168 | 4_2:+12998942 | None:intergenic |
| CCTCTAGGGTGAATGTGAGG+TGG | 0.565620 | 4_2:+12997635 | None:intergenic |
| GGGAATGCCTCTAACGCACT+AGG | 0.573570 | 4_2:-12997755 | Msa0589750:CDS |
| GGACTTAGCAGTCAAAATCC+AGG | 0.578792 | 4_2:-12997434 | Msa0589750:CDS |
| TATTCGGACTCAACACACTT+GGG | 0.584132 | 4_2:-12997700 | Msa0589750:CDS |
| TTTAAACAAAGCATTTGCAA+CGG | 0.590900 | 4_2:+12997403 | None:intergenic |
| TTCACCAAAGTTCTCAACAA+GGG | 0.595598 | 4_2:-12997533 | Msa0589750:CDS |
| CTTCACCAAAGTTCTCAACA+AGG | 0.598137 | 4_2:-12997534 | Msa0589750:CDS |
| TCACCAAAGTTCTCAACAAG+GGG | 0.602098 | 4_2:-12997532 | Msa0589750:CDS |
| AGGGCTGGGGTCATAAGCAA+AGG | 0.629845 | 4_2:+12998955 | None:intergenic |
| TCACATTCACCCTAGAGGAA+CGG | 0.635178 | 4_2:-12997630 | Msa0589750:CDS |
| ATCAAAGACCCCAAAGATGG+TGG | 0.635231 | 4_2:-12998911 | Msa0589750:intron |
| CAACACAAAAGTCTTGGAGA+GGG | 0.638884 | 4_2:+12998936 | None:intergenic |
| TATACATACCACCATCTTTG+GGG | 0.639620 | 4_2:+12998903 | None:intergenic |
| GCAACACAAAAGTCTTGGAG+AGG | 0.651085 | 4_2:+12998935 | None:intergenic |
| CTTCAGCTTTAACTAGCGCG+GGG | 0.662073 | 4_2:+12997801 | None:intergenic |
| GTTCCTCTAGGGTGAATGTG+AGG | 0.681575 | 4_2:+12997632 | None:intergenic |
| CCACCTCACATTCACCCTAG+AGG | 0.685266 | 4_2:-12997635 | Msa0589750:CDS |
| CACCAAAGTTCTCAACAAGG+GGG | 0.737020 | 4_2:-12997531 | Msa0589750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTACTAAATAATG+GGG | + | chr4_2:12997648-12997667 | None:intergenic | 10.0% |
| !! | ATTAAAATGATGATTAAATT+TGG | + | chr4_2:12997800-12997819 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATACATATTGT+AGG | + | chr4_2:12998257-12998276 | None:intergenic | 10.0% |
| !! | ATATTTAGTATTATAGTATA+TGG | - | chr4_2:12998288-12998307 | Msa0589750:intron | 10.0% |
| !!! | TAATTTTTTACTAAATAATG+GGG | + | chr4_2:12997648-12997667 | None:intergenic | 10.0% |
| !! | ATTAAAATGATGATTAAATT+TGG | + | chr4_2:12997800-12997819 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATACATATTGT+AGG | + | chr4_2:12998257-12998276 | None:intergenic | 10.0% |
| !! | ATATTTAGTATTATAGTATA+TGG | - | chr4_2:12998288-12998307 | Msa0589750:intron | 10.0% |
| !! | ATACTAAAATTAATAAGTAG+TGG | + | chr4_2:12997596-12997615 | None:intergenic | 15.0% |
| !!! | AATTTTTTACTAAATAATGG+GGG | + | chr4_2:12997647-12997666 | None:intergenic | 15.0% |
| !!! | TTATTTTACTATAGTAAAGT+TGG | - | chr4_2:12997674-12997693 | Msa0589750:CDS | 15.0% |
| !! | TAAATGAAATATGAATTAGT+TGG | + | chr4_2:12997701-12997720 | None:intergenic | 15.0% |
| !! | ATTATTTGTATGTACTTAAT+AGG | + | chr4_2:12998060-12998079 | None:intergenic | 15.0% |
| !! | TCCATTTATATATTACTATA+AGG | - | chr4_2:12998210-12998229 | Msa0589750:intron | 15.0% |
| !! | ACCTTATAGTAATATATAAA+TGG | + | chr4_2:12998214-12998233 | None:intergenic | 15.0% |
| !!! | AAATATAGAATCTTTTGTTT+TGG | - | chr4_2:12998393-12998412 | Msa0589750:intron | 15.0% |
| !! | ATACTAAAATTAATAAGTAG+TGG | + | chr4_2:12997596-12997615 | None:intergenic | 15.0% |
| !!! | AATTTTTTACTAAATAATGG+GGG | + | chr4_2:12997647-12997666 | None:intergenic | 15.0% |
| !!! | TTATTTTACTATAGTAAAGT+TGG | - | chr4_2:12997674-12997693 | Msa0589750:CDS | 15.0% |
| !! | TAAATGAAATATGAATTAGT+TGG | + | chr4_2:12997701-12997720 | None:intergenic | 15.0% |
| !! | ATTATTTGTATGTACTTAAT+AGG | + | chr4_2:12998060-12998079 | None:intergenic | 15.0% |
| !! | TCCATTTATATATTACTATA+AGG | - | chr4_2:12998210-12998229 | Msa0589750:intron | 15.0% |
| !! | ACCTTATAGTAATATATAAA+TGG | + | chr4_2:12998214-12998233 | None:intergenic | 15.0% |
| !!! | AAATATAGAATCTTTTGTTT+TGG | - | chr4_2:12998393-12998412 | Msa0589750:intron | 15.0% |
| !! | TAATCAAGACTTAAAAGTTA+AGG | + | chr4_2:12997461-12997480 | None:intergenic | 20.0% |
| !! | CCTGTTAAACAAAAAAAAAT+GGG | + | chr4_2:12997951-12997970 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTTTGTTTAACA+GGG | - | chr4_2:12997949-12997968 | Msa0589750:intron | 20.0% |
| !!! | AATAGGCTTCTAAAAAATAT+TGG | + | chr4_2:12997979-12997998 | None:intergenic | 20.0% |
| !!! | CCTAACTTTTTTAGTTAAAT+AGG | + | chr4_2:12997996-12998015 | None:intergenic | 20.0% |
| !! | CCTATTTAACTAAAAAAGTT+AGG | - | chr4_2:12997993-12998012 | Msa0589750:intron | 20.0% |
| !! | AAAGAAAATTTATGTAGAGT+CGG | + | chr4_2:12998351-12998370 | None:intergenic | 20.0% |
| !! | TAATCAAGACTTAAAAGTTA+AGG | + | chr4_2:12997461-12997480 | None:intergenic | 20.0% |
| !! | CCTGTTAAACAAAAAAAAAT+GGG | + | chr4_2:12997951-12997970 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTTTGTTTAACA+GGG | - | chr4_2:12997949-12997968 | Msa0589750:intron | 20.0% |
| !!! | AATAGGCTTCTAAAAAATAT+TGG | + | chr4_2:12997979-12997998 | None:intergenic | 20.0% |
| !!! | CCTAACTTTTTTAGTTAAAT+AGG | + | chr4_2:12997996-12998015 | None:intergenic | 20.0% |
| !! | CCTATTTAACTAAAAAAGTT+AGG | - | chr4_2:12997993-12998012 | Msa0589750:intron | 20.0% |
| !! | AAAGAAAATTTATGTAGAGT+CGG | + | chr4_2:12998351-12998370 | None:intergenic | 20.0% |
| ! | CAAAAAGTCTAATATTTGCA+GGG | + | chr4_2:12997522-12997541 | None:intergenic | 25.0% |
| ! | CTAAAATTAATAAGTAGTGG+AGG | + | chr4_2:12997593-12997612 | None:intergenic | 25.0% |
| !!! | CCCATTTTTTTTTGTTTAAC+AGG | - | chr4_2:12997948-12997967 | Msa0589750:intron | 25.0% |
| ! | CCCTGTTAAACAAAAAAAAA+TGG | + | chr4_2:12997952-12997971 | None:intergenic | 25.0% |
| !! | AACCATAGATAAAGTCTTTT+AGG | - | chr4_2:12998021-12998040 | Msa0589750:intron | 25.0% |
| ! | ACATTTCAATAAATACCAAG+TGG | + | chr4_2:12998140-12998159 | None:intergenic | 25.0% |
| ! | GAAAATGAATAAGACCAATT+GGG | + | chr4_2:12998842-12998861 | None:intergenic | 25.0% |
| ! | TGAAAATGAATAAGACCAAT+TGG | + | chr4_2:12998843-12998862 | None:intergenic | 25.0% |
| !! | TATTCATTTTCAACTGAATG+TGG | - | chr4_2:12998851-12998870 | Msa0589750:intron | 25.0% |
| !! | ATTCATTTTCAACTGAATGT+GGG | - | chr4_2:12998852-12998871 | Msa0589750:intron | 25.0% |
| !! | TTTAAACAAAGCATTTGCAA+CGG | + | chr4_2:12998934-12998953 | None:intergenic | 25.0% |
| ! | CAAAAAGTCTAATATTTGCA+GGG | + | chr4_2:12997522-12997541 | None:intergenic | 25.0% |
| ! | CTAAAATTAATAAGTAGTGG+AGG | + | chr4_2:12997593-12997612 | None:intergenic | 25.0% |
| !!! | CCCATTTTTTTTTGTTTAAC+AGG | - | chr4_2:12997948-12997967 | Msa0589750:intron | 25.0% |
| ! | CCCTGTTAAACAAAAAAAAA+TGG | + | chr4_2:12997952-12997971 | None:intergenic | 25.0% |
| !! | AACCATAGATAAAGTCTTTT+AGG | - | chr4_2:12998021-12998040 | Msa0589750:intron | 25.0% |
| ! | ACATTTCAATAAATACCAAG+TGG | + | chr4_2:12998140-12998159 | None:intergenic | 25.0% |
| ! | GAAAATGAATAAGACCAATT+GGG | + | chr4_2:12998842-12998861 | None:intergenic | 25.0% |
| ! | TGAAAATGAATAAGACCAAT+TGG | + | chr4_2:12998843-12998862 | None:intergenic | 25.0% |
| !! | TATTCATTTTCAACTGAATG+TGG | - | chr4_2:12998851-12998870 | Msa0589750:intron | 25.0% |
| !! | ATTCATTTTCAACTGAATGT+GGG | - | chr4_2:12998852-12998871 | Msa0589750:intron | 25.0% |
| !! | TTTAAACAAAGCATTTGCAA+CGG | + | chr4_2:12998934-12998953 | None:intergenic | 25.0% |
| ATATACATACCACCATCTTT+GGG | + | chr4_2:12997435-12997454 | None:intergenic | 30.0% | |
| TATATACATACCACCATCTT+TGG | + | chr4_2:12997436-12997455 | None:intergenic | 30.0% | |
| CCAAAAAGTCTAATATTTGC+AGG | + | chr4_2:12997523-12997542 | None:intergenic | 30.0% | |
| ! | CCTGCAAATATTAGACTTTT+TGG | - | chr4_2:12997520-12997539 | Msa0589750:CDS | 30.0% |
| AAGACTTTATCTATGGTTTG+TGG | + | chr4_2:12998019-12998038 | None:intergenic | 30.0% | |
| ! | AGCCAGAAATTTTAGATTGT+GGG | + | chr4_2:12998322-12998341 | None:intergenic | 30.0% |
| !!! | GAATCTTTTGTTTTGGTTCA+CGG | - | chr4_2:12998400-12998419 | Msa0589750:intron | 30.0% |
| ! | TAATTTGCAGTGTTTGTGAA+CGG | - | chr4_2:12998495-12998514 | Msa0589750:intron | 30.0% |
| GAAATCCTTATAGTACTTGA+AGG | - | chr4_2:12998726-12998745 | Msa0589750:intron | 30.0% | |
| ATTATCTTCAAAAGCAGTCT+TGG | - | chr4_2:12999018-12999037 | Msa0589750:exon | 30.0% | |
| ATATACATACCACCATCTTT+GGG | + | chr4_2:12997435-12997454 | None:intergenic | 30.0% | |
| TATATACATACCACCATCTT+TGG | + | chr4_2:12997436-12997455 | None:intergenic | 30.0% | |
| CCAAAAAGTCTAATATTTGC+AGG | + | chr4_2:12997523-12997542 | None:intergenic | 30.0% | |
| ! | CCTGCAAATATTAGACTTTT+TGG | - | chr4_2:12997520-12997539 | Msa0589750:CDS | 30.0% |
| AAGACTTTATCTATGGTTTG+TGG | + | chr4_2:12998019-12998038 | None:intergenic | 30.0% | |
| ! | AGCCAGAAATTTTAGATTGT+GGG | + | chr4_2:12998322-12998341 | None:intergenic | 30.0% |
| !!! | GAATCTTTTGTTTTGGTTCA+CGG | - | chr4_2:12998400-12998419 | Msa0589750:intron | 30.0% |
| ! | TAATTTGCAGTGTTTGTGAA+CGG | - | chr4_2:12998495-12998514 | Msa0589750:intron | 30.0% |
| GAAATCCTTATAGTACTTGA+AGG | - | chr4_2:12998726-12998745 | Msa0589750:intron | 30.0% | |
| ATTATCTTCAAAAGCAGTCT+TGG | - | chr4_2:12999018-12999037 | Msa0589750:exon | 30.0% | |
| ATACTTCCTTGTTAGCATCT+TGG | - | chr4_2:12997338-12997357 | Msa0589750:CDS | 35.0% | |
| TATACATACCACCATCTTTG+GGG | + | chr4_2:12997434-12997453 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGTTTTACTCCATG+TGG | - | chr4_2:12997535-12997554 | Msa0589750:CDS | 35.0% |
| ! | AAATAATGGGGGCATAAAGT+TGG | + | chr4_2:12997636-12997655 | None:intergenic | 35.0% |
| TGTAAGCTAGGTTAAAGGTT+GGG | + | chr4_2:12997919-12997938 | None:intergenic | 35.0% | |
| ATGTAAGCTAGGTTAAAGGT+TGG | + | chr4_2:12997920-12997939 | None:intergenic | 35.0% | |
| CCTAATGTAAGCTAGGTTAA+AGG | + | chr4_2:12997924-12997943 | None:intergenic | 35.0% | |
| CCTTTAACCTAGCTTACATT+AGG | - | chr4_2:12997921-12997940 | Msa0589750:intron | 35.0% | |
| GGCCTAAAAGACTTTATCTA+TGG | + | chr4_2:12998026-12998045 | None:intergenic | 35.0% | |
| ! | TAAAGTCTTTTAGGCCAACA+AGG | - | chr4_2:12998030-12998049 | Msa0589750:intron | 35.0% |
| ! | CCAGAAATTTTAGATTGTGG+GGG | + | chr4_2:12998320-12998339 | None:intergenic | 35.0% |
| ! | GCCAGAAATTTTAGATTGTG+GGG | + | chr4_2:12998321-12998340 | None:intergenic | 35.0% |
| ! | GAGCCAGAAATTTTAGATTG+TGG | + | chr4_2:12998323-12998342 | None:intergenic | 35.0% |
| GAAAATTTATGTAGAGTCGG+TGG | + | chr4_2:12998348-12998367 | None:intergenic | 35.0% | |
| !!! | ATTTTAGCAGTTTCTAGCCA+TGG | + | chr4_2:12998446-12998465 | None:intergenic | 35.0% |
| AATTTGCAGTGTTTGTGAAC+GGG | - | chr4_2:12998496-12998515 | Msa0589750:intron | 35.0% | |
| TTCTTCAAACATGTTGAAGC+TGG | - | chr4_2:12998558-12998577 | Msa0589750:intron | 35.0% | |
| TCTTCAAACATGTTGAAGCT+GGG | - | chr4_2:12998559-12998578 | Msa0589750:intron | 35.0% | |
| ! | ACGATTGTTGTTGTCTTGAT+TGG | + | chr4_2:12998778-12998797 | None:intergenic | 35.0% |
| TTCACCAAAGTTCTCAACAA+GGG | - | chr4_2:12998801-12998820 | Msa0589750:intron | 35.0% | |
| !! | TCTTACCAAAGCTTTTCAAG+TGG | - | chr4_2:12998980-12998999 | Msa0589750:CDS | 35.0% |
| CTTATCCACTTGAAAAGCTT+TGG | + | chr4_2:12998988-12999007 | None:intergenic | 35.0% | |
| ATACTTCCTTGTTAGCATCT+TGG | - | chr4_2:12997338-12997357 | Msa0589750:CDS | 35.0% | |
| TATACATACCACCATCTTTG+GGG | + | chr4_2:12997434-12997453 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGTTTTACTCCATG+TGG | - | chr4_2:12997535-12997554 | Msa0589750:CDS | 35.0% |
| ! | AAATAATGGGGGCATAAAGT+TGG | + | chr4_2:12997636-12997655 | None:intergenic | 35.0% |
| TGTAAGCTAGGTTAAAGGTT+GGG | + | chr4_2:12997919-12997938 | None:intergenic | 35.0% | |
| ATGTAAGCTAGGTTAAAGGT+TGG | + | chr4_2:12997920-12997939 | None:intergenic | 35.0% | |
| CCTAATGTAAGCTAGGTTAA+AGG | + | chr4_2:12997924-12997943 | None:intergenic | 35.0% | |
| CCTTTAACCTAGCTTACATT+AGG | - | chr4_2:12997921-12997940 | Msa0589750:intron | 35.0% | |
| GGCCTAAAAGACTTTATCTA+TGG | + | chr4_2:12998026-12998045 | None:intergenic | 35.0% | |
| ! | TAAAGTCTTTTAGGCCAACA+AGG | - | chr4_2:12998030-12998049 | Msa0589750:intron | 35.0% |
| ! | CCAGAAATTTTAGATTGTGG+GGG | + | chr4_2:12998320-12998339 | None:intergenic | 35.0% |
| ! | GCCAGAAATTTTAGATTGTG+GGG | + | chr4_2:12998321-12998340 | None:intergenic | 35.0% |
| ! | GAGCCAGAAATTTTAGATTG+TGG | + | chr4_2:12998323-12998342 | None:intergenic | 35.0% |
| GAAAATTTATGTAGAGTCGG+TGG | + | chr4_2:12998348-12998367 | None:intergenic | 35.0% | |
| !!! | ATTTTAGCAGTTTCTAGCCA+TGG | + | chr4_2:12998446-12998465 | None:intergenic | 35.0% |
| AATTTGCAGTGTTTGTGAAC+GGG | - | chr4_2:12998496-12998515 | Msa0589750:intron | 35.0% | |
| TTCTTCAAACATGTTGAAGC+TGG | - | chr4_2:12998558-12998577 | Msa0589750:intron | 35.0% | |
| TCTTCAAACATGTTGAAGCT+GGG | - | chr4_2:12998559-12998578 | Msa0589750:intron | 35.0% | |
| ! | ACGATTGTTGTTGTCTTGAT+TGG | + | chr4_2:12998778-12998797 | None:intergenic | 35.0% |
| TTCACCAAAGTTCTCAACAA+GGG | - | chr4_2:12998801-12998820 | Msa0589750:intron | 35.0% | |
| !! | TCTTACCAAAGCTTTTCAAG+TGG | - | chr4_2:12998980-12998999 | Msa0589750:CDS | 35.0% |
| CTTATCCACTTGAAAAGCTT+TGG | + | chr4_2:12998988-12999007 | None:intergenic | 35.0% | |
| CAACACAAAAGTCTTGGAGA+GGG | + | chr4_2:12997401-12997420 | None:intergenic | 40.0% | |
| TGATGGCAACACAAAAGTCT+TGG | + | chr4_2:12997407-12997426 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTACTCCATGTGG+CGG | - | chr4_2:12997538-12997557 | Msa0589750:CDS | 40.0% |
| ACTTAATAGGCCAACCTTGT+TGG | + | chr4_2:12998047-12998066 | None:intergenic | 40.0% | |
| !! | GAAGTCACTGACTTGAGAAT+TGG | + | chr4_2:12998118-12998137 | None:intergenic | 40.0% |
| ! | CCCCCACAATCTAAAATTTC+TGG | - | chr4_2:12998317-12998336 | Msa0589750:intron | 40.0% |
| AATTTATGTAGAGTCGGTGG+CGG | + | chr4_2:12998345-12998364 | None:intergenic | 40.0% | |
| ! | ATCTTCAGCTTTAACTAGCG+CGG | + | chr4_2:12998538-12998557 | None:intergenic | 40.0% |
| GTCACTGTAGACCAACTATT+CGG | - | chr4_2:12998618-12998637 | Msa0589750:intron | 40.0% | |
| TATTCGGACTCAACACACTT+GGG | - | chr4_2:12998634-12998653 | Msa0589750:intron | 40.0% | |
| CAACACACTTGGGATATCTT+TGG | - | chr4_2:12998644-12998663 | Msa0589750:intron | 40.0% | |
| TAAGGATTTCCGTTCCTCTA+GGG | + | chr4_2:12998716-12998735 | None:intergenic | 40.0% | |
| ATAAGGATTTCCGTTCCTCT+AGG | + | chr4_2:12998717-12998736 | None:intergenic | 40.0% | |
| GACTGCCTTCAAGTACTATA+AGG | + | chr4_2:12998734-12998753 | None:intergenic | 40.0% | |
| CTTGAAGGCAGTCTTTATGT+TGG | - | chr4_2:12998741-12998760 | Msa0589750:intron | 40.0% | |
| CTTCACCAAAGTTCTCAACA+AGG | - | chr4_2:12998800-12998819 | Msa0589750:intron | 40.0% | |
| TCACCAAAGTTCTCAACAAG+GGG | - | chr4_2:12998802-12998821 | Msa0589750:intron | 40.0% | |
| GATGTGTTTGTGTTCCCAAT+TGG | - | chr4_2:12998825-12998844 | Msa0589750:intron | 40.0% | |
| ! | TTTCAACTGAATGTGGGCTA+TGG | - | chr4_2:12998858-12998877 | Msa0589750:intron | 40.0% |
| AGAACTTCGTCGGAAATAAG+AGG | + | chr4_2:12998963-12998982 | None:intergenic | 40.0% | |
| ! | AGCTTTGGTAAGAACTTCGT+CGG | + | chr4_2:12998973-12998992 | None:intergenic | 40.0% |
| CAACACAAAAGTCTTGGAGA+GGG | + | chr4_2:12997401-12997420 | None:intergenic | 40.0% | |
| TGATGGCAACACAAAAGTCT+TGG | + | chr4_2:12997407-12997426 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTACTCCATGTGG+CGG | - | chr4_2:12997538-12997557 | Msa0589750:CDS | 40.0% |
| ACTTAATAGGCCAACCTTGT+TGG | + | chr4_2:12998047-12998066 | None:intergenic | 40.0% | |
| !! | GAAGTCACTGACTTGAGAAT+TGG | + | chr4_2:12998118-12998137 | None:intergenic | 40.0% |
| ! | CCCCCACAATCTAAAATTTC+TGG | - | chr4_2:12998317-12998336 | Msa0589750:intron | 40.0% |
| AATTTATGTAGAGTCGGTGG+CGG | + | chr4_2:12998345-12998364 | None:intergenic | 40.0% | |
| ! | ATCTTCAGCTTTAACTAGCG+CGG | + | chr4_2:12998538-12998557 | None:intergenic | 40.0% |
| GTCACTGTAGACCAACTATT+CGG | - | chr4_2:12998618-12998637 | Msa0589750:intron | 40.0% | |
| TATTCGGACTCAACACACTT+GGG | - | chr4_2:12998634-12998653 | Msa0589750:intron | 40.0% | |
| CAACACACTTGGGATATCTT+TGG | - | chr4_2:12998644-12998663 | Msa0589750:intron | 40.0% | |
| TAAGGATTTCCGTTCCTCTA+GGG | + | chr4_2:12998716-12998735 | None:intergenic | 40.0% | |
| ATAAGGATTTCCGTTCCTCT+AGG | + | chr4_2:12998717-12998736 | None:intergenic | 40.0% | |
| GACTGCCTTCAAGTACTATA+AGG | + | chr4_2:12998734-12998753 | None:intergenic | 40.0% | |
| CTTGAAGGCAGTCTTTATGT+TGG | - | chr4_2:12998741-12998760 | Msa0589750:intron | 40.0% | |
| CTTCACCAAAGTTCTCAACA+AGG | - | chr4_2:12998800-12998819 | Msa0589750:intron | 40.0% | |
| TCACCAAAGTTCTCAACAAG+GGG | - | chr4_2:12998802-12998821 | Msa0589750:intron | 40.0% | |
| GATGTGTTTGTGTTCCCAAT+TGG | - | chr4_2:12998825-12998844 | Msa0589750:intron | 40.0% | |
| ! | TTTCAACTGAATGTGGGCTA+TGG | - | chr4_2:12998858-12998877 | Msa0589750:intron | 40.0% |
| AGAACTTCGTCGGAAATAAG+AGG | + | chr4_2:12998963-12998982 | None:intergenic | 40.0% | |
| ! | AGCTTTGGTAAGAACTTCGT+CGG | + | chr4_2:12998973-12998992 | None:intergenic | 40.0% |
| CCAAAGCCAAGATGCTAACA+AGG | + | chr4_2:12997347-12997366 | None:intergenic | 45.0% | |
| CCTTGTTAGCATCTTGGCTT+TGG | - | chr4_2:12997344-12997363 | Msa0589750:CDS | 45.0% | |
| GCAACACAAAAGTCTTGGAG+AGG | + | chr4_2:12997402-12997421 | None:intergenic | 45.0% | |
| !! | ACCATCTTTGGGGTCTTTGA+TGG | + | chr4_2:12997424-12997443 | None:intergenic | 45.0% |
| ATCAAAGACCCCAAAGATGG+TGG | - | chr4_2:12997423-12997442 | Msa0589750:CDS | 45.0% | |
| AGCTACATGTACCCTTGTGT+GGG | - | chr4_2:12997561-12997580 | Msa0589750:CDS | 45.0% | |
| ! | GTCTTTTAGGCCAACAAGGT+TGG | - | chr4_2:12998034-12998053 | Msa0589750:intron | 45.0% |
| GGAATAGGCTGAGTCAAGTT+AGG | + | chr4_2:12998091-12998110 | None:intergenic | 45.0% | |
| TTGAGAATTGGAGCGGGAAT+AGG | + | chr4_2:12998106-12998125 | None:intergenic | 45.0% | |
| !! | ACTGACTTGAGAATTGGAGC+GGG | + | chr4_2:12998112-12998131 | None:intergenic | 45.0% |
| !! | CACTGACTTGAGAATTGGAG+CGG | + | chr4_2:12998113-12998132 | None:intergenic | 45.0% |
| TCAAGTCAGTGACTTCCACT+TGG | - | chr4_2:12998122-12998141 | Msa0589750:intron | 45.0% | |
| !!! | TTTTGGTTCACGGTGTTTCC+TGG | - | chr4_2:12998410-12998429 | Msa0589750:intron | 45.0% |
| ! | TCTTCAGCTTTAACTAGCGC+GGG | + | chr4_2:12998537-12998556 | None:intergenic | 45.0% |
| GTGTGTTGAGTCCGAATAGT+TGG | + | chr4_2:12998632-12998651 | None:intergenic | 45.0% | |
| CTATTCGGACTCAACACACT+TGG | - | chr4_2:12998633-12998652 | Msa0589750:intron | 45.0% | |
| ! | TGAGGTGGGTTTAAACCCTT+AGG | + | chr4_2:12998687-12998706 | None:intergenic | 45.0% |
| TCACATTCACCCTAGAGGAA+CGG | - | chr4_2:12998704-12998723 | Msa0589750:intron | 45.0% | |
| CACCAAAGTTCTCAACAAGG+GGG | - | chr4_2:12998803-12998822 | Msa0589750:intron | 45.0% | |
| ATCCCCCTTGTTGAGAACTT+TGG | + | chr4_2:12998808-12998827 | None:intergenic | 45.0% | |
| GGACTTAGCAGTCAAAATCC+AGG | - | chr4_2:12998900-12998919 | Msa0589750:intron | 45.0% | |
| TTTGCAACGGTGATAACTCC+TGG | + | chr4_2:12998921-12998940 | None:intergenic | 45.0% | |
| CCAAAGCCAAGATGCTAACA+AGG | + | chr4_2:12997347-12997366 | None:intergenic | 45.0% | |
| CCTTGTTAGCATCTTGGCTT+TGG | - | chr4_2:12997344-12997363 | Msa0589750:CDS | 45.0% | |
| GCAACACAAAAGTCTTGGAG+AGG | + | chr4_2:12997402-12997421 | None:intergenic | 45.0% | |
| !! | ACCATCTTTGGGGTCTTTGA+TGG | + | chr4_2:12997424-12997443 | None:intergenic | 45.0% |
| ATCAAAGACCCCAAAGATGG+TGG | - | chr4_2:12997423-12997442 | Msa0589750:CDS | 45.0% | |
| AGCTACATGTACCCTTGTGT+GGG | - | chr4_2:12997561-12997580 | Msa0589750:CDS | 45.0% | |
| ! | GTCTTTTAGGCCAACAAGGT+TGG | - | chr4_2:12998034-12998053 | Msa0589750:intron | 45.0% |
| GGAATAGGCTGAGTCAAGTT+AGG | + | chr4_2:12998091-12998110 | None:intergenic | 45.0% | |
| TTGAGAATTGGAGCGGGAAT+AGG | + | chr4_2:12998106-12998125 | None:intergenic | 45.0% | |
| !! | ACTGACTTGAGAATTGGAGC+GGG | + | chr4_2:12998112-12998131 | None:intergenic | 45.0% |
| !! | CACTGACTTGAGAATTGGAG+CGG | + | chr4_2:12998113-12998132 | None:intergenic | 45.0% |
| TCAAGTCAGTGACTTCCACT+TGG | - | chr4_2:12998122-12998141 | Msa0589750:intron | 45.0% | |
| !!! | TTTTGGTTCACGGTGTTTCC+TGG | - | chr4_2:12998410-12998429 | Msa0589750:intron | 45.0% |
| ! | TCTTCAGCTTTAACTAGCGC+GGG | + | chr4_2:12998537-12998556 | None:intergenic | 45.0% |
| GTGTGTTGAGTCCGAATAGT+TGG | + | chr4_2:12998632-12998651 | None:intergenic | 45.0% | |
| CTATTCGGACTCAACACACT+TGG | - | chr4_2:12998633-12998652 | Msa0589750:intron | 45.0% | |
| ! | TGAGGTGGGTTTAAACCCTT+AGG | + | chr4_2:12998687-12998706 | None:intergenic | 45.0% |
| TCACATTCACCCTAGAGGAA+CGG | - | chr4_2:12998704-12998723 | Msa0589750:intron | 45.0% | |
| CACCAAAGTTCTCAACAAGG+GGG | - | chr4_2:12998803-12998822 | Msa0589750:intron | 45.0% | |
| ATCCCCCTTGTTGAGAACTT+TGG | + | chr4_2:12998808-12998827 | None:intergenic | 45.0% | |
| GGACTTAGCAGTCAAAATCC+AGG | - | chr4_2:12998900-12998919 | Msa0589750:intron | 45.0% | |
| TTTGCAACGGTGATAACTCC+TGG | + | chr4_2:12998921-12998940 | None:intergenic | 45.0% | |
| !!! | TTAATTTTTTACTAAATAAT+GGG | + | chr4_2:12997649-12997668 | None:intergenic | 5.0% |
| !!! | TTTAATTTTTTACTAAATAA+TGG | + | chr4_2:12997650-12997669 | None:intergenic | 5.0% |
| !!! | TTAATTTTTTACTAAATAAT+GGG | + | chr4_2:12997649-12997668 | None:intergenic | 5.0% |
| !!! | TTTAATTTTTTACTAAATAA+TGG | + | chr4_2:12997650-12997669 | None:intergenic | 5.0% |
| AAAAGTCTTGGAGAGGGCTG+GGG | + | chr4_2:12997395-12997414 | None:intergenic | 50.0% | |
| CAAAAGTCTTGGAGAGGGCT+GGG | + | chr4_2:12997396-12997415 | None:intergenic | 50.0% | |
| ACAAAAGTCTTGGAGAGGGC+TGG | + | chr4_2:12997397-12997416 | None:intergenic | 50.0% | |
| GCCATCAAAGACCCCAAAGA+TGG | - | chr4_2:12997420-12997439 | Msa0589750:CDS | 50.0% | |
| GAGCTACATGTACCCTTGTG+TGG | - | chr4_2:12997560-12997579 | Msa0589750:CDS | 50.0% | |
| GGGCTCACCTAATGTAAGCT+AGG | + | chr4_2:12997931-12997950 | None:intergenic | 50.0% | |
| CGGTGTTTCCTGGTTTAGCT+AGG | - | chr4_2:12998420-12998439 | Msa0589750:intron | 50.0% | |
| TTCCTGGTTTAGCTAGGCCA+TGG | - | chr4_2:12998426-12998445 | Msa0589750:intron | 50.0% | |
| ! | CTTCAGCTTTAACTAGCGCG+GGG | + | chr4_2:12998536-12998555 | None:intergenic | 50.0% |
| TTGAGAGCCTAGTGCGTTAG+AGG | + | chr4_2:12998589-12998608 | None:intergenic | 50.0% | |
| !!! | TCGCGTTGATTTTGCGCCTA+AGG | - | chr4_2:12998668-12998687 | Msa0589750:intron | 50.0% |
| !!! | CGCGTTGATTTTGCGCCTAA+GGG | - | chr4_2:12998669-12998688 | Msa0589750:intron | 50.0% |
| !! | CTCTAGGGTGAATGTGAGGT+GGG | + | chr4_2:12998701-12998720 | None:intergenic | 50.0% |
| !! | GTTCCTCTAGGGTGAATGTG+AGG | + | chr4_2:12998705-12998724 | None:intergenic | 50.0% |
| AAAAGTCTTGGAGAGGGCTG+GGG | + | chr4_2:12997395-12997414 | None:intergenic | 50.0% | |
| CAAAAGTCTTGGAGAGGGCT+GGG | + | chr4_2:12997396-12997415 | None:intergenic | 50.0% | |
| ACAAAAGTCTTGGAGAGGGC+TGG | + | chr4_2:12997397-12997416 | None:intergenic | 50.0% | |
| GCCATCAAAGACCCCAAAGA+TGG | - | chr4_2:12997420-12997439 | Msa0589750:CDS | 50.0% | |
| GAGCTACATGTACCCTTGTG+TGG | - | chr4_2:12997560-12997579 | Msa0589750:CDS | 50.0% | |
| GGGCTCACCTAATGTAAGCT+AGG | + | chr4_2:12997931-12997950 | None:intergenic | 50.0% | |
| CGGTGTTTCCTGGTTTAGCT+AGG | - | chr4_2:12998420-12998439 | Msa0589750:intron | 50.0% | |
| TTCCTGGTTTAGCTAGGCCA+TGG | - | chr4_2:12998426-12998445 | Msa0589750:intron | 50.0% | |
| ! | CTTCAGCTTTAACTAGCGCG+GGG | + | chr4_2:12998536-12998555 | None:intergenic | 50.0% |
| TTGAGAGCCTAGTGCGTTAG+AGG | + | chr4_2:12998589-12998608 | None:intergenic | 50.0% | |
| !!! | TCGCGTTGATTTTGCGCCTA+AGG | - | chr4_2:12998668-12998687 | Msa0589750:intron | 50.0% |
| !!! | CGCGTTGATTTTGCGCCTAA+GGG | - | chr4_2:12998669-12998688 | Msa0589750:intron | 50.0% |
| !! | CTCTAGGGTGAATGTGAGGT+GGG | + | chr4_2:12998701-12998720 | None:intergenic | 50.0% |
| !! | GTTCCTCTAGGGTGAATGTG+AGG | + | chr4_2:12998705-12998724 | None:intergenic | 50.0% |
| AGGGCTGGGGTCATAAGCAA+AGG | + | chr4_2:12997382-12997401 | None:intergenic | 55.0% | |
| GTACATGTAGCTCCGCCACA+TGG | + | chr4_2:12997553-12997572 | None:intergenic | 55.0% | |
| AGCCATGGCCTAGCTAAACC+AGG | + | chr4_2:12998431-12998450 | None:intergenic | 55.0% | |
| GGGAATGCCTCTAACGCACT+AGG | - | chr4_2:12998579-12998598 | Msa0589750:intron | 55.0% | |
| !! | CCTCTAGGGTGAATGTGAGG+TGG | + | chr4_2:12998702-12998721 | None:intergenic | 55.0% |
| CCACCTCACATTCACCCTAG+AGG | - | chr4_2:12998699-12998718 | Msa0589750:intron | 55.0% | |
| ! | GGCAACGCTGTTGCTATTGC+TGG | - | chr4_2:12998879-12998898 | Msa0589750:intron | 55.0% |
| AGGGCTGGGGTCATAAGCAA+AGG | + | chr4_2:12997382-12997401 | None:intergenic | 55.0% | |
| GTACATGTAGCTCCGCCACA+TGG | + | chr4_2:12997553-12997572 | None:intergenic | 55.0% | |
| AGCCATGGCCTAGCTAAACC+AGG | + | chr4_2:12998431-12998450 | None:intergenic | 55.0% | |
| GGGAATGCCTCTAACGCACT+AGG | - | chr4_2:12998579-12998598 | Msa0589750:intron | 55.0% | |
| !! | CCTCTAGGGTGAATGTGAGG+TGG | + | chr4_2:12998702-12998721 | None:intergenic | 55.0% |
| CCACCTCACATTCACCCTAG+AGG | - | chr4_2:12998699-12998718 | Msa0589750:intron | 55.0% | |
| ! | GGCAACGCTGTTGCTATTGC+TGG | - | chr4_2:12998879-12998898 | Msa0589750:intron | 55.0% |
| ! | GGAGGCACATGCCCACACAA+GGG | + | chr4_2:12997575-12997594 | None:intergenic | 60.0% |
| ! | TGGAGGCACATGCCCACACA+AGG | + | chr4_2:12997576-12997595 | None:intergenic | 60.0% |
| ! | GGAGGCACATGCCCACACAA+GGG | + | chr4_2:12997575-12997594 | None:intergenic | 60.0% |
| ! | TGGAGGCACATGCCCACACA+AGG | + | chr4_2:12997576-12997595 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 12997301 | 12999055 | 12997301 | ID=Msa0589750;Name=Msa0589750 |
| chr4_2 | mRNA | 12997301 | 12999055 | 12997301 | ID=Msa0589750-mRNA-1;Parent=Msa0589750;Name=Msa0589750-mRNA-1;_AED=0.28;_eAED=0.28;_QI=26|0|0.5|1|1|1|2|0|222 |
| chr4_2 | exon | 12997301 | 12997851 | 12997301 | ID=Msa0589750-mRNA-1:exon:3822;Parent=Msa0589750-mRNA-1 |
| chr4_2 | exon | 12998912 | 12999055 | 12998912 | ID=Msa0589750-mRNA-1:exon:3821;Parent=Msa0589750-mRNA-1 |
| chr4_2 | five_prime_UTR | 12999030 | 12999055 | 12999030 | ID=Msa0589750-mRNA-1:five_prime_utr;Parent=Msa0589750-mRNA-1 |
| chr4_2 | CDS | 12998912 | 12999029 | 12998912 | ID=Msa0589750-mRNA-1:cds;Parent=Msa0589750-mRNA-1 |
| chr4_2 | CDS | 12997301 | 12997851 | 12997301 | ID=Msa0589750-mRNA-1:cds;Parent=Msa0589750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
