AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222070 MtrunA17_Chr2g0326841 99.043 209 2 0 1 209 1 209 7.83e-156 429
Msa0222070 MtrunA17_Chr7g0264181 87.317 205 26 0 3 207 4 208 1.62e-133 373
Msa0222070 MtrunA17_Chr1g0181131 85.990 207 29 0 1 207 1 207 2.34e-133 373
Msa0222070 MtrunA17_Chr4g0028871 89.899 198 20 0 12 209 12 209 1.00e-132 371
Msa0222070 MtrunA17_Chr3g0142491 76.329 207 49 0 1 207 3 209 1.25e-119 338
Msa0222070 MtrunA17_Chr1g0177391 76.410 195 46 0 10 204 6 200 3.25e-114 324
Msa0222070 MtrunA17_Chr1g0151201 69.000 200 60 1 11 208 7 206 4.14e-102 294
Msa0222070 MtrunA17_Chr1g0156401 66.964 112 16 1 40 130 1 112 7.38e-45 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222070 AT2G28305.1 88.945 199 22 0 10 208 5 203 1.37e-132 371
Msa0222070 AT2G37210.1 85.644 202 29 0 7 208 8 209 1.59e-130 366
Msa0222070 AT3G53450.1 84.236 203 32 0 7 209 8 210 1.59e-127 358
Msa0222070 AT2G37210.2 76.106 226 30 1 7 208 8 233 1.39e-124 352
Msa0222070 AT2G28305.3 90.659 182 17 0 10 191 5 186 6.26e-122 343
Msa0222070 AT5G06300.1 79.000 200 42 0 5 204 1 200 7.27e-118 334
Msa0222070 AT5G03270.1 82.796 186 32 0 10 195 16 201 2.70e-113 322
Msa0222070 AT2G35990.1 71.144 201 58 0 5 205 1 201 1.46e-110 315
Msa0222070 AT5G03270.2 82.873 181 31 0 10 190 16 196 4.77e-109 311
Msa0222070 AT4G35190.1 69.458 203 62 0 5 207 1 203 2.47e-105 303
Msa0222070 AT5G11950.1 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0222070 AT5G11950.2 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0222070 AT5G11950.3 68.342 199 63 0 10 208 7 205 2.24e-101 292
Msa0222070 AT4G35190.2 70.103 194 56 1 5 198 1 192 1.16e-100 290
Msa0222070 AT2G28305.2 92.593 135 10 0 10 144 5 139 6.22e-89 258
Msa0222070 AT2G35990.3 71.812 149 42 0 57 205 1 149 5.61e-80 236
Msa0222070 AT2G35990.2 71.812 149 42 0 57 205 1 149 5.61e-80 236
Msa0222070 AT5G11950.4 68.421 152 48 0 57 208 1 152 3.92e-74 221
Msa0222070 AT5G26140.2 53.061 147 47 1 84 208 6 152 2.46e-45 148
Msa0222070 AT5G26140.1 51.880 133 42 1 98 208 1 133 6.09e-38 129
Msa0222070 AT5G26140.3 56.863 102 44 0 107 208 17 118 2.06e-34 119

Find 67 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAATATTGATCTAGTTTA+TGG 0.105402 2_1:-71055047 Msa0222070:CDS
CTCTCTTGGCATTAGTGTTT+TGG 0.116726 2_1:+71054759 None:intergenic
TGTTTCTACTTTAATTACTA+TGG 0.284874 2_1:+71055636 None:intergenic
GATGGTGGTCGACATGTAAT+TGG 0.286287 2_1:-71054978 Msa0222070:CDS
AATGATGCTGACTCGTCTAT+AGG 0.325760 2_1:+71055559 None:intergenic
GTTAATGTAAACTATCGATT+TGG 0.336123 2_1:-71049856 Msa0222070:three_prime_UTR
CCAACCTGGTAAGGCTATAA+AGG 0.339119 2_1:+71053639 None:intergenic
TATACTATGCTGCAGCTTAC+TGG 0.352094 2_1:-71053736 Msa0222070:intron
ATGATGCTGACTCGTCTATA+GGG 0.353587 2_1:+71055560 None:intergenic
TATTGAACTTGGAAAAGAAT+TGG 0.373481 2_1:-71055323 Msa0222070:intron
AGGAGGCAGCATTGGTTTGA+TGG 0.380464 2_1:-71055024 Msa0222070:CDS
TGGTAACAAAACTAGCTATA+AGG 0.381980 2_1:-71055353 Msa0222070:CDS
CGGTTATATGGTATATATAA+AGG 0.383302 2_1:+71055492 None:intergenic
CTGCATAACTTTACCTCTCT+TGG 0.385694 2_1:+71054745 None:intergenic
GTGGTATAAGCGCGGTTATA+TGG 0.390897 2_1:+71055480 None:intergenic
GGAGGCAGCATTGGTTTGAT+GGG 0.391809 2_1:-71055023 Msa0222070:CDS
GCATCAAAGGAAAGCTGAAA+TGG 0.434148 2_1:-71053677 Msa0222070:CDS
TATTTGCATGAAGGTGGGTA+TGG 0.435005 2_1:-71050703 Msa0222070:intron
GAGTTGCCTCCAAGCTAAGC+TGG 0.437628 2_1:-71050066 Msa0222070:CDS
TTTGTCGATGAAAGTCAAAA+AGG 0.444110 2_1:+71050480 None:intergenic
AAATCTTTACCGGTTTATCA+TGG 0.448590 2_1:+71050632 None:intergenic
GTGGGATTGCTGAATGTTGA+TGG 0.455471 2_1:-71050514 Msa0222070:CDS
CCTTTGATATGAGTGGTTGA+TGG 0.456369 2_1:+71055456 None:intergenic
AAGGATGCTGCTATTGAACT+TGG 0.459571 2_1:-71055334 Msa0222070:CDS
TCTCTCACCTTTGATATGAG+TGG 0.472849 2_1:+71055449 None:intergenic
GGTAGAAGATCACAATTTCA+TGG 0.474201 2_1:-71049912 Msa0222070:three_prime_UTR
TTTGAATGAATGGTGAAAGA+GGG 0.481457 2_1:-71055661 None:intergenic
TTGGTGCAGACACAATTATA+TGG 0.490804 2_1:+71050422 None:intergenic
TTGTTTGTACCAACCTGGTA+AGG 0.495823 2_1:+71053630 None:intergenic
GTTTATGGAGGAGGCAGCAT+TGG 0.498113 2_1:-71055032 Msa0222070:CDS
CACAATTATATGGCGAGCTG+TGG 0.500721 2_1:+71050432 None:intergenic
ACTTGGCATCCATGATAAAC+CGG 0.501203 2_1:-71050641 Msa0222070:intron
ATTTCCCAAGCTGTTTATGA+TGG 0.505165 2_1:-71054996 Msa0222070:CDS
GATGCCTTTATAGCCTTACC+AGG 0.517415 2_1:-71053643 Msa0222070:intron
ACAATTATATGGCGAGCTGT+GGG 0.517777 2_1:+71050433 None:intergenic
TCCCAAGCTGTTTATGATGG+TGG 0.519492 2_1:-71054993 Msa0222070:CDS
ACCACCATCATAAACAGCTT+GGG 0.519561 2_1:+71054992 None:intergenic
ATTGATCTAGTTTATGGAGG+AGG 0.523752 2_1:-71055041 Msa0222070:CDS
GACAACTCAAGGAACTACTA+TGG 0.525382 2_1:-71049933 Msa0222070:three_prime_UTR
AGGCAACTCTTTCATGCTGT+GGG 0.528340 2_1:+71050080 None:intergenic
TCAAAGGTGAGAGAGAAGAA+TGG 0.531372 2_1:-71055440 Msa0222070:exon
GTGATAACATGGGCTCAACT+TGG 0.532726 2_1:-71050658 Msa0222070:CDS
CAGTAGCTGACATGCATCAA+AGG 0.536960 2_1:-71053690 Msa0222070:CDS
GACCACCATCATAAACAGCT+TGG 0.537227 2_1:+71054991 None:intergenic
GAGGCAGCATTGGTTTGATG+GGG 0.537940 2_1:-71055022 Msa0222070:CDS
ATCGACAAAGCTGTGGAGGA+AGG 0.545903 2_1:-71050466 Msa0222070:CDS
GAGGCAACTCTTTCATGCTG+TGG 0.549574 2_1:+71050079 None:intergenic
ATTTGCATGAAGGTGGGTAT+GGG 0.550161 2_1:-71050702 Msa0222070:intron
GACTTTCATCGACAAAGCTG+TGG 0.562460 2_1:-71050473 Msa0222070:CDS
AGCTCCTTGAGGTGATAACA+TGG 0.564557 2_1:-71050669 Msa0222070:CDS
CAGCTTACTGGTGAAACAGT+AGG 0.570843 2_1:-71053724 Msa0222070:CDS
ATGGTGGTCGACATGTAATT+GGG 0.573816 2_1:-71054977 Msa0222070:intron
GATATGAGTGGTTGATGGTG+TGG 0.576120 2_1:+71055461 None:intergenic
AATATTGATCTAGTTTATGG+AGG 0.578824 2_1:-71055044 Msa0222070:CDS
TTGAATGAATGGTGAAAGAG+GGG 0.580105 2_1:-71055660 None:intergenic
AGTTGCCTCCAAGCTAAGCT+GGG 0.587565 2_1:-71050065 Msa0222070:CDS
CCATCAACCACTCATATCAA+AGG 0.611945 2_1:-71055456 Msa0222070:five_prime_UTR
GAGCCCATGTTATCACCTCA+AGG 0.614099 2_1:+71050665 None:intergenic
TCAAAATGTGAGACAACTCA+AGG 0.622102 2_1:-71049944 Msa0222070:three_prime_UTR
TTTCATCGACAAAGCTGTGG+AGG 0.624003 2_1:-71050470 Msa0222070:CDS
CAAAACACTAATGCCAAGAG+AGG 0.626831 2_1:-71054758 Msa0222070:intron
GACACTTGAGGAGCTCCTTG+AGG 0.631827 2_1:-71050680 Msa0222070:CDS
GACTCGTCTATAGGGAACCA+AGG 0.651655 2_1:+71055568 None:intergenic
CAATTATATGGCGAGCTGTG+GGG 0.655172 2_1:+71050434 None:intergenic
AGGTGGGTATGGGACACTTG+AGG 0.655697 2_1:-71050692 Msa0222070:CDS
GCTCCTTGAGGTGATAACAT+GGG 0.684486 2_1:-71050668 Msa0222070:CDS
TTGATGGTGTGGTATAAGCG+CGG 0.761838 2_1:+71055472 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTACTTATATTTTGTTA+TGG + chr2_1:71050299-71050318 None:intergenic 10.0%
!!! TTGTATTTTGATATATAAAA+AGG - chr2_1:71050398-71050417 Msa0222070:CDS 10.0%
!! ATGATAAAGAATATAAAAAA+GGG + chr2_1:71051099-71051118 None:intergenic 10.0%
!!! AAATTAAAGTTTACATTTTA+TGG + chr2_1:71052088-71052107 None:intergenic 10.0%
!! TTCATGATGATAATAAAATA+AGG + chr2_1:71050210-71050229 None:intergenic 15.0%
!! GATGATAAAGAATATAAAAA+AGG + chr2_1:71051100-71051119 None:intergenic 15.0%
!!! GTGTCATTTTAATTATTTTT+TGG + chr2_1:71051355-71051374 None:intergenic 15.0%
!! CTTCTAATATTTGATTAAAT+GGG - chr2_1:71052112-71052131 Msa0222070:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr2_1:71052410-71052429 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_1:71052434-71052453 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_1:71052433-71052452 Msa0222070:intron 15.0%
!! AAAATGAAAAGAGAAAAAAA+AGG + chr2_1:71052708-71052727 None:intergenic 15.0%
!!! TTTTTTTCTCTTTTCATTTT+AGG - chr2_1:71052708-71052727 Msa0222070:intron 15.0%
!! ATTTGTCATGTAATAATTAA+TGG + chr2_1:71053517-71053536 None:intergenic 15.0%
!! AAACATCAAAAATAAAGATT+AGG - chr2_1:71053570-71053589 Msa0222070:intron 15.0%
!!! AAAGATTATTGAATATTTTG+AGG - chr2_1:71054081-71054100 Msa0222070:intron 15.0%
!!! GATGATTGTATATTTTTTTA+AGG + chr2_1:71054637-71054656 None:intergenic 15.0%
!!! ATAAAAGTTTTTGTTTTTGA+AGG - chr2_1:71054937-71054956 Msa0222070:intron 15.0%
!!! TGTTTCTACTTTAATTACTA+TGG + chr2_1:71049840-71049859 None:intergenic 20.0%
!! ATATCATATCATAGGTATAT+AGG + chr2_1:71050353-71050372 None:intergenic 20.0%
!! TATATACCTATGATATGATA+TGG - chr2_1:71050352-71050371 Msa0222070:intron 20.0%
!!! AGAAATATTGATCTAGTTTA+TGG - chr2_1:71050426-71050445 Msa0222070:CDS 20.0%
!! AGTTTGTAAATTTGAACTAT+AGG + chr2_1:71050969-71050988 None:intergenic 20.0%
!! TATATTCTTTATCATCATTG+AGG - chr2_1:71051104-71051123 Msa0222070:intron 20.0%
!! TTAAATGATTAAACATTGCA+AGG - chr2_1:71051251-71051270 Msa0222070:intron 20.0%
!! ATTAAGCGTCATTTAAAAAT+TGG + chr2_1:71051307-71051326 None:intergenic 20.0%
!! TTGAATAAAATTATCCTTAG+TGG + chr2_1:71051419-71051438 None:intergenic 20.0%
!! AAATATCGACAGTTAATATA+TGG + chr2_1:71051448-71051467 None:intergenic 20.0%
!! CCATTTAATCAAATATTAGA+AGG + chr2_1:71052114-71052133 None:intergenic 20.0%
!! CCTTCTAATATTTGATTAAA+TGG - chr2_1:71052111-71052130 Msa0222070:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_1:71052424-71052443 Msa0222070:intron 20.0%
!! ATGATTAAAAAGAAAGAGAA+TGG + chr2_1:71052467-71052486 None:intergenic 20.0%
!! TTATGTGTAATTCATCTTAA+AGG + chr2_1:71052867-71052886 None:intergenic 20.0%
!! TTAAAAGTTGACAAATTCAA+TGG - chr2_1:71052925-71052944 Msa0222070:intron 20.0%
!!! TTGTTGGTTAAAATCTATAT+AGG - chr2_1:71053050-71053069 Msa0222070:intron 20.0%
!!! ATTTGTTTTAGGTTAAAAGA+TGG + chr2_1:71053222-71053241 None:intergenic 20.0%
!!! GGTTAAGTTTTATTTGTTTT+AGG + chr2_1:71053233-71053252 None:intergenic 20.0%
!!! AAAATATTTTCCCTGAAAAA+CGG - chr2_1:71053383-71053402 Msa0222070:intron 20.0%
!!! CTTATCACTTTTCAATTAAT+GGG + chr2_1:71053601-71053620 None:intergenic 20.0%
!!! TCTTATCACTTTTCAATTAA+TGG + chr2_1:71053602-71053621 None:intergenic 20.0%
!! TTAATTGAAAAGTGATAAGA+TGG - chr2_1:71053602-71053621 Msa0222070:intron 20.0%
!!! ATTATATTTCAAGTAACGTT+TGG + chr2_1:71053820-71053839 None:intergenic 20.0%
!! ATCAAAATACCTATTATTGA+AGG + chr2_1:71053879-71053898 None:intergenic 20.0%
!! ATTACGATAAAGTAAAACAA+AGG + chr2_1:71053917-71053936 None:intergenic 20.0%
!! AAAACCAAATCAATAATGTT+TGG + chr2_1:71054128-71054147 None:intergenic 20.0%
!!! GAAAAAATTGGTTTCAAAAT+GGG + chr2_1:71054714-71054733 None:intergenic 20.0%
!!! AGAAAAAATTGGTTTCAAAA+TGG + chr2_1:71054715-71054734 None:intergenic 20.0%
!! GTACTAGAAATAGAAAAAAT+TGG + chr2_1:71054726-71054745 None:intergenic 20.0%
!!! GCAAATTTTATCTCATAAAA+GGG + chr2_1:71054913-71054932 None:intergenic 20.0%
!!! AGCAAATTTTATCTCATAAA+AGG + chr2_1:71054914-71054933 None:intergenic 20.0%
!!! AGAATTAGTTTTCATTCTTT+TGG - chr2_1:71055348-71055367 Msa0222070:CDS 20.0%
! CGGTTATATGGTATATATAA+AGG + chr2_1:71049984-71050003 None:intergenic 25.0%
! TATTGAACTTGGAAAAGAAT+TGG - chr2_1:71050150-71050169 Msa0222070:intron 25.0%
! TCAAAAGAATTTGACGTATT+TGG - chr2_1:71050323-71050342 Msa0222070:intron 25.0%
! TAAACACCATATCATATCAT+AGG + chr2_1:71050361-71050380 None:intergenic 25.0%
!! AATATTGATCTAGTTTATGG+AGG - chr2_1:71050429-71050448 Msa0222070:CDS 25.0%
!! TCTTCTTCTTAAACCTATTT+TGG - chr2_1:71050553-71050572 Msa0222070:intron 25.0%
! ATATTGAGATAACAAAAGCA+TGG + chr2_1:71050856-71050875 None:intergenic 25.0%
! CCAAGCTTAAATTTATGATA+GGG + chr2_1:71051175-71051194 None:intergenic 25.0%
! ACAAATAAAAAAATGTGTCG+CGG + chr2_1:71051524-71051543 None:intergenic 25.0%
!! ATGTAATGATGAGTTTTTGA+AGG + chr2_1:71051598-71051617 None:intergenic 25.0%
! AGTGATATGAGTATTTAGTA+GGG + chr2_1:71051655-71051674 None:intergenic 25.0%
! CTATTGTTTCAGTGATAATT+TGG - chr2_1:71051712-71051731 Msa0222070:intron 25.0%
! ATGATTCACAAGTTTAATAG+TGG + chr2_1:71052196-71052215 None:intergenic 25.0%
!! AGTAGTGATTCACTAATTTT+TGG + chr2_1:71052220-71052239 None:intergenic 25.0%
!! TATGTGTTGGTATATTTAGA+TGG - chr2_1:71052558-71052577 Msa0222070:intron 25.0%
!!! TTGGAAAGCACTTAAATTTT+TGG - chr2_1:71052817-71052836 Msa0222070:intron 25.0%
!! TTTTAACCAACAAAAAGAGT+AGG + chr2_1:71053043-71053062 None:intergenic 25.0%
! ATGTGATTCCTATGTAAATT+TGG + chr2_1:71053080-71053099 None:intergenic 25.0%
!! GTAAGTTCAAAAATTCCTTT+TGG + chr2_1:71053463-71053482 None:intergenic 25.0%
!! TATAGTTGATACGATCAAAT+TGG - chr2_1:71053715-71053734 Msa0222070:CDS 25.0%
! GAGAAATTCTAATATAGTCA+CGG - chr2_1:71053985-71054004 Msa0222070:intron 25.0%
! AGAAATTCTAATATAGTCAC+GGG - chr2_1:71053986-71054005 Msa0222070:intron 25.0%
!!! ATTTTTTTTTCCTGATGGTA+CGG + chr2_1:71054467-71054486 None:intergenic 25.0%
!!! AGACAATTTTTTTTTCCTGA+TGG + chr2_1:71054472-71054491 None:intergenic 25.0%
!! TTTCTTCTGAGTTTGAATTT+TGG + chr2_1:71054571-71054590 None:intergenic 25.0%
!!! ATTTTTTTAAGGACCAATGT+TGG + chr2_1:71054626-71054645 None:intergenic 25.0%
! ATACAATCATCTAACAAAAC+TGG - chr2_1:71054646-71054665 Msa0222070:intron 25.0%
! TACAATCATCTAACAAAACT+GGG - chr2_1:71054647-71054666 Msa0222070:intron 25.0%
!!! TAGTACCATGTTTTCTAAAA+GGG - chr2_1:71054740-71054759 Msa0222070:intron 25.0%
!!! TATAACCCTTTTAGAAAACA+TGG + chr2_1:71054748-71054767 None:intergenic 25.0%
! GGTTATATATATTTGCATGA+AGG - chr2_1:71054761-71054780 Msa0222070:CDS 25.0%
! TATATATATTTGCATGAAGG+TGG - chr2_1:71054764-71054783 Msa0222070:CDS 25.0%
! ATATATATTTGCATGAAGGT+GGG - chr2_1:71054765-71054784 Msa0222070:CDS 25.0%
! TGTAGAATGAAAATCTTTAC+CGG + chr2_1:71054854-71054873 None:intergenic 25.0%
!!! AAAGTTTTTGTTTTTGAAGG+TGG - chr2_1:71054940-71054959 Msa0222070:intron 25.0%
!!! AAGTTTTTGTTTTTGAAGGT+GGG - chr2_1:71054941-71054960 Msa0222070:intron 25.0%
!!! ATATTTTTGACAAGCTCTTT+TGG + chr2_1:71055079-71055098 None:intergenic 25.0%
! AAAAGAGCTTGTCAAAAATA+TGG - chr2_1:71055078-71055097 Msa0222070:intron 25.0%
! ATCTATATACTTCTATCCAA+CGG - chr2_1:71055111-71055130 Msa0222070:intron 25.0%
!! TCTTAGATTTCACAATTTTG+AGG + chr2_1:71055455-71055474 None:intergenic 25.0%
!! TGAAATCTAAGATGATTAGA+TGG - chr2_1:71055463-71055482 Msa0222070:five_prime_UTR 25.0%
!! GTTAATGTAAACTATCGATT+TGG - chr2_1:71055617-71055636 Msa0222070:five_prime_UTR 25.0%
! ACATTGTATCAAGTTTTCCT+TGG - chr2_1:71049888-71049907 Msa0222070:three_prime_UTR 30.0%
!! TCAGCATCATTTTAATGATG+TGG - chr2_1:71049926-71049945 Msa0222070:three_prime_UTR 30.0%
! AAGAGAATTTGTGTGTTTTG+TGG - chr2_1:71050088-71050107 Msa0222070:CDS 30.0%
!!! TATAGCTAGTTTTGTTACCA+GGG + chr2_1:71050120-71050139 None:intergenic 30.0%
!!! TTATAGCTAGTTTTGTTACC+AGG + chr2_1:71050121-71050140 None:intergenic 30.0%
TGGTAACAAAACTAGCTATA+AGG - chr2_1:71050120-71050139 Msa0222070:intron 30.0%
GGTTTCTGTAAATCCAAAAT+AGG + chr2_1:71050569-71050588 None:intergenic 30.0%
CGATAAATTTGACGATATCA+CGG + chr2_1:71050614-71050633 None:intergenic 30.0%
CTTATCTATCAATATACACC+TGG - chr2_1:71050987-71051006 Msa0222070:intron 30.0%
! AGAATCTAAAGGGTGTAATA+TGG + chr2_1:71051064-71051083 None:intergenic 30.0%
AATGCCAATGAGAATCTAAA+GGG + chr2_1:71051074-71051093 None:intergenic 30.0%
TAATGCCAATGAGAATCTAA+AGG + chr2_1:71051075-71051094 None:intergenic 30.0%
CCCTATCATAAATTTAAGCT+TGG - chr2_1:71051172-71051191 Msa0222070:intron 30.0%
GCCAAGCTTAAATTTATGAT+AGG + chr2_1:71051176-71051195 None:intergenic 30.0%
TTAAATGACGCTTAATTGCA+AGG - chr2_1:71051311-71051330 Msa0222070:intron 30.0%
AAAATGCATTTGTATCAGCA+GGG + chr2_1:71051625-71051644 None:intergenic 30.0%
AAAAATGCATTTGTATCAGC+AGG + chr2_1:71051626-71051645 None:intergenic 30.0%
! TGCTGATACAAATGCATTTT+TGG - chr2_1:71051625-71051644 Msa0222070:intron 30.0%
GAGTGATATGAGTATTTAGT+AGG + chr2_1:71051656-71051675 None:intergenic 30.0%
AAATATTGGAGCTAGAAAGA+AGG + chr2_1:71051869-71051888 None:intergenic 30.0%
! TAGCTCCAATATTTTTCTCA+TGG - chr2_1:71051875-71051894 Msa0222070:intron 30.0%
! TCCAATATTTTTCTCATGGA+TGG - chr2_1:71051879-71051898 Msa0222070:intron 30.0%
ACCATCCATGAGAAAAATAT+TGG + chr2_1:71051883-71051902 None:intergenic 30.0%
TGTGGAATGTAAATTCCAAT+AGG - chr2_1:71051902-71051921 Msa0222070:intron 30.0%
TTCCAATAGGTGATTCATTA+AGG - chr2_1:71051915-71051934 Msa0222070:intron 30.0%
CGAATTTGGATTTATGAAGT+TGG - chr2_1:71052001-71052020 Msa0222070:intron 30.0%
ATTTGGATTTATGAAGTTGG+AGG - chr2_1:71052004-71052023 Msa0222070:intron 30.0%
GGGTATCTCTATAAATGTAA+GGG - chr2_1:71052162-71052181 Msa0222070:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr2_1:71052516-71052535 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr2_1:71052517-71052536 Msa0222070:intron 30.0%
GTATTATTGGTCATATGTGT+TGG - chr2_1:71052545-71052564 Msa0222070:intron 30.0%
AAAGTGGGGAAAAAATTGAT+TGG + chr2_1:71052794-71052813 None:intergenic 30.0%
!!! ATTTTTTCCCCACTTTTTGT+TGG - chr2_1:71052798-71052817 Msa0222070:intron 30.0%
!!! ATTTTTGGAATTTGCAAGAG+TGG - chr2_1:71052832-71052851 Msa0222070:intron 30.0%
AAGAGTAGGTTGTAAAGTTT+AGG + chr2_1:71053029-71053048 None:intergenic 30.0%
! TTACAACCTACTCTTTTTGT+TGG - chr2_1:71053034-71053053 Msa0222070:intron 30.0%
TGATTCCTATGTAAATTTGG+TGG + chr2_1:71053077-71053096 None:intergenic 30.0%
! ATCATCTGAGTTGGATAATT+TGG + chr2_1:71053254-71053273 None:intergenic 30.0%
AGCTTATTAATCATCTGAGT+TGG + chr2_1:71053263-71053282 None:intergenic 30.0%
CTTTCAAAGCCTTCAATAAT+AGG - chr2_1:71053867-71053886 Msa0222070:intron 30.0%
! GTGTCCAAACATTATTGATT+TGG - chr2_1:71054121-71054140 Msa0222070:intron 30.0%
GAGATTAAAGTGTGTGAAAA+CGG + chr2_1:71054310-71054329 None:intergenic 30.0%
!!! CCTACAACTTTTTTAACTCT+AGG + chr2_1:71054547-71054566 None:intergenic 30.0%
CCTAGAGTTAAAAAAGTTGT+AGG - chr2_1:71054544-71054563 Msa0222070:intron 30.0%
!! AATGTTGGTGATTAGTTGTT+AGG + chr2_1:71054611-71054630 None:intergenic 30.0%
TAACAACTAATCACCAACAT+TGG - chr2_1:71054610-71054629 Msa0222070:intron 30.0%
ACAATCATCTAACAAAACTG+GGG - chr2_1:71054648-71054667 Msa0222070:intron 30.0%
! CTAGTACCATGTTTTCTAAA+AGG - chr2_1:71054739-71054758 Msa0222070:intron 30.0%
!! AAATCTTTACCGGTTTATCA+TGG + chr2_1:71054844-71054863 None:intergenic 30.0%
TTTGTCGATGAAAGTCAAAA+AGG + chr2_1:71054996-71055015 None:intergenic 30.0%
! GTTGGATAGAAGTATATAGA+TGG + chr2_1:71055112-71055131 None:intergenic 30.0%
TAGTCTATTCTCAGTTCAAT+CGG + chr2_1:71055148-71055167 None:intergenic 30.0%
GAACTGAGAATAGACTAATT+AGG - chr2_1:71055151-71055170 Msa0222070:intron 30.0%
AAGATTGAACCGCATTAAAT+CGG - chr2_1:71055225-71055244 Msa0222070:intron 30.0%
TTGAAGAACCAGTGAAAATT+CGG + chr2_1:71055319-71055338 None:intergenic 30.0%
!!! TCTTTTGGTTTCATTCATGT+AGG - chr2_1:71055363-71055382 Msa0222070:CDS 30.0%
! ATTGATCTAGTTTATGGAGG+AGG - chr2_1:71050432-71050451 Msa0222070:CDS 35.0%
ATTTCCCAAGCTGTTTATGA+TGG - chr2_1:71050477-71050496 Msa0222070:CDS 35.0%
TAAATTTGACGATATCACGG+TGG + chr2_1:71050611-71050630 None:intergenic 35.0%
! TCTCTTGGCATTAGTGTTTT+GGG + chr2_1:71050716-71050735 None:intergenic 35.0%
TGTGCGATTATTCATTCAAG+TGG - chr2_1:71050900-71050919 Msa0222070:intron 35.0%
GTGCGATTATTCATTCAAGT+GGG - chr2_1:71050901-71050920 Msa0222070:intron 35.0%
GAAAGACAAAATGGTTCAGA+AGG + chr2_1:71051031-71051050 None:intergenic 35.0%
ACATGGAGAGAAAGACAAAA+TGG + chr2_1:71051040-71051059 None:intergenic 35.0%
! AAAGGGTGTAATATGGAACA+TGG + chr2_1:71051057-71051076 None:intergenic 35.0%
TACACCCTTTAGATTCTCAT+TGG - chr2_1:71051067-71051086 Msa0222070:intron 35.0%
CCTTAGTGGAGTTTATTCAT+AGG + chr2_1:71051405-71051424 None:intergenic 35.0%
CCTATGAATAAACTCCACTA+AGG - chr2_1:71051402-71051421 Msa0222070:intron 35.0%
!! GATGAGTTTTTGAAGGTAGT+GGG + chr2_1:71051591-71051610 None:intergenic 35.0%
!! TGATGAGTTTTTGAAGGTAG+TGG + chr2_1:71051592-71051611 None:intergenic 35.0%
! TATTTTTCTCATGGATGGTG+TGG - chr2_1:71051884-71051903 Msa0222070:intron 35.0%
TGCCTTAATGAATCACCTAT+TGG + chr2_1:71051920-71051939 None:intergenic 35.0%
TCATTAAGGCACATGTCAAA+AGG - chr2_1:71051929-71051948 Msa0222070:intron 35.0%
CAAATTCGTCTATAGTCATG+CGG + chr2_1:71051989-71052008 None:intergenic 35.0%
! GGGGTATCTCTATAAATGTA+AGG - chr2_1:71052161-71052180 Msa0222070:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_1:71052281-71052300 None:intergenic 35.0%
GGAAAAAATTGATTGGCAGT+TGG + chr2_1:71052787-71052806 None:intergenic 35.0%
AGTGCTTTCCAACAAAAAGT+GGG + chr2_1:71052809-71052828 None:intergenic 35.0%
AAGTGCTTTCCAACAAAAAG+TGG + chr2_1:71052810-71052829 None:intergenic 35.0%
GACAAATTCAATGGAAGAGA+TGG - chr2_1:71052934-71052953 Msa0222070:intron 35.0%
CAATATCAATCGCTACTCAT+TGG + chr2_1:71052972-71052991 None:intergenic 35.0%
TAGGTCCACCAAATTTACAT+AGG - chr2_1:71053069-71053088 Msa0222070:intron 35.0%
TAGGTTAAAAGATGGTTGAC+TGG + chr2_1:71053214-71053233 None:intergenic 35.0%
!! AGGTCTAATTCCGTTTTTCA+GGG + chr2_1:71053396-71053415 None:intergenic 35.0%
! AATTCCTTTTGGACATCGTA+TGG + chr2_1:71053452-71053471 None:intergenic 35.0%
! TAATTAATGGACAACCGAAG+TGG + chr2_1:71053504-71053523 None:intergenic 35.0%
TGCAAGATCGATGTAAGAAT+GGG + chr2_1:71053963-71053982 None:intergenic 35.0%
TTGCAAGATCGATGTAAGAA+TGG + chr2_1:71053964-71053983 None:intergenic 35.0%
ATTCTTACATCGATCTTGCA+AGG - chr2_1:71053963-71053982 Msa0222070:intron 35.0%
! GTGACCAAACACTATTTTCT+TGG + chr2_1:71054013-71054032 None:intergenic 35.0%
!!! TTGATTTGGTTTTGTGACCA+TGG - chr2_1:71054135-71054154 Msa0222070:intron 35.0%
AAGAATATCTCTCTTGCAAG+TGG - chr2_1:71054158-71054177 Msa0222070:intron 35.0%
! CTATATCTTTGGGTTTGTGT+GGG + chr2_1:71054188-71054207 None:intergenic 35.0%
CACACAAACCCAAAGATATA+GGG - chr2_1:71054187-71054206 Msa0222070:intron 35.0%
ACACAAACCCAAAGATATAG+GGG - chr2_1:71054188-71054207 Msa0222070:intron 35.0%
CTCAGCTACTAGAATTTGAT+CGG - chr2_1:71054327-71054346 Msa0222070:intron 35.0%
AAATCTGCATCCCATGATAA+GGG - chr2_1:71054389-71054408 Msa0222070:intron 35.0%
AAAAACAAATCCGTACCATC+AGG - chr2_1:71054454-71054473 Msa0222070:intron 35.0%
TTGGTGCAGACACAATTATA+TGG + chr2_1:71055054-71055073 None:intergenic 35.0%
AGAGCTTGTCAAAAATATGG+AGG - chr2_1:71055081-71055100 Msa0222070:intron 35.0%
CTGAGAATAGACTAATTAGG+TGG - chr2_1:71055154-71055173 Msa0222070:intron 35.0%
GAATAGACTAATTAGGTGGT+TGG - chr2_1:71055158-71055177 Msa0222070:intron 35.0%
!! TTAGGTGGTTGGTTTAATCT+AGG - chr2_1:71055169-71055188 Msa0222070:intron 35.0%
! AATTCGGGTTATGGTTCAAT+TGG + chr2_1:71055303-71055322 None:intergenic 35.0%
TGAAGAACCAGTGAAAATTC+GGG + chr2_1:71055318-71055337 None:intergenic 35.0%
GATGATTAGATGGTAATCGA+TGG - chr2_1:71055473-71055492 Msa0222070:five_prime_UTR 35.0%
TCAAAATGTGAGACAACTCA+AGG - chr2_1:71055529-71055548 Msa0222070:five_prime_UTR 35.0%
GGTAGAAGATCACAATTTCA+TGG - chr2_1:71055561-71055580 Msa0222070:five_prime_UTR 35.0%
! GTAAGAGCACACAAAAATCT+CGG + chr2_1:71055589-71055608 None:intergenic 35.0%
!! ATGATGCTGACTCGTCTATA+GGG + chr2_1:71049916-71049935 None:intergenic 40.0%
!! AATGATGCTGACTCGTCTAT+AGG + chr2_1:71049917-71049936 None:intergenic 40.0%
CCTTTGATATGAGTGGTTGA+TGG + chr2_1:71050020-71050039 None:intergenic 40.0%
CCATCAACCACTCATATCAA+AGG - chr2_1:71050017-71050036 Msa0222070:three_prime_UTR 40.0%
TCTCTCACCTTTGATATGAG+TGG + chr2_1:71050027-71050046 None:intergenic 40.0%
TCAAAGGTGAGAGAGAAGAA+TGG - chr2_1:71050033-71050052 Msa0222070:exon 40.0%
AAGGATGCTGCTATTGAACT+TGG - chr2_1:71050139-71050158 Msa0222070:intron 40.0%
ACCACCATCATAAACAGCTT+GGG + chr2_1:71050484-71050503 None:intergenic 40.0%
ATGGTGGTCGACATGTAATT+GGG - chr2_1:71050496-71050515 Msa0222070:CDS 40.0%
GAAGAAGAAGATGAAGCTCT+TGG + chr2_1:71050526-71050545 None:intergenic 40.0%
! CTCTCTTGGCATTAGTGTTT+TGG + chr2_1:71050717-71050736 None:intergenic 40.0%
CAAAACACTAATGCCAAGAG+AGG - chr2_1:71050715-71050734 Msa0222070:intron 40.0%
CTGCATAACTTTACCTCTCT+TGG + chr2_1:71050731-71050750 None:intergenic 40.0%
GAGGTAAAGTTATGCAGCTT+TGG - chr2_1:71050734-71050753 Msa0222070:intron 40.0%
TTCATTCAAGTGGGAACTAG+TGG - chr2_1:71050910-71050929 Msa0222070:intron 40.0%
TCAATATACACCTGGCAATC+TGG - chr2_1:71050995-71051014 Msa0222070:intron 40.0%
CAATATACACCTGGCAATCT+GGG - chr2_1:71050996-71051015 Msa0222070:intron 40.0%
AATATACACCTGGCAATCTG+GGG - chr2_1:71050997-71051016 Msa0222070:intron 40.0%
TATACTATGCTGCAGCTTAC+TGG - chr2_1:71051737-71051756 Msa0222070:intron 40.0%
GCATCAAAGGAAAGCTGAAA+TGG - chr2_1:71051796-71051815 Msa0222070:intron 40.0%
TTGTTTGTACCAACCTGGTA+AGG + chr2_1:71051846-71051865 None:intergenic 40.0%
CGCATGACTATAGACGAATT+TGG - chr2_1:71051987-71052006 Msa0222070:intron 40.0%
TTGTCACGATTGCATGAATG+CGG + chr2_1:71052033-71052052 None:intergenic 40.0%
TCATGCAATCGTGACAACAT+CGG - chr2_1:71052036-71052055 Msa0222070:intron 40.0%
ATATTCTAACCGCGTGAACT+AGG - chr2_1:71052140-71052159 Msa0222070:intron 40.0%
TATTCTAACCGCGTGAACTA+GGG - chr2_1:71052141-71052160 Msa0222070:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_1:71052521-71052540 None:intergenic 40.0%
TGTGCTGCGTATTAATTGGA+GGG + chr2_1:71052381-71052400 None:intergenic 40.0%
GTAGTGTGCTGCGTATTAAT+TGG + chr2_1:71052385-71052404 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_1:71052521-71052540 Msa0222070:intron 40.0%
!! TGAAACGGAGGGAGTATTAT+TGG - chr2_1:71052532-71052551 Msa0222070:intron 40.0%
GTGCTTTCCAACAAAAAGTG+GGG + chr2_1:71052808-71052827 None:intergenic 40.0%
!! GAGGTCTAATTCCGTTTTTC+AGG + chr2_1:71053397-71053416 None:intergenic 40.0%
GACATGTCAATACGACTTAG+AGG + chr2_1:71053416-71053435 None:intergenic 40.0%
AAGACCATACGATGTCCAAA+AGG - chr2_1:71053445-71053464 Msa0222070:intron 40.0%
ATTACATGAATGCGCCACTT+CGG - chr2_1:71053487-71053506 Msa0222070:intron 40.0%
!! GAAGGCTTTGAAAGCGATTA+AGG + chr2_1:71053861-71053880 None:intergenic 40.0%
GGGACCAAGAAAATAGTGTT+TGG - chr2_1:71054006-71054025 Msa0222070:intron 40.0%
GCAAGAGAGATATTCTTCCA+TGG + chr2_1:71054155-71054174 None:intergenic 40.0%
! CCTATATCTTTGGGTTTGTG+TGG + chr2_1:71054189-71054208 None:intergenic 40.0%
CCACACAAACCCAAAGATAT+AGG - chr2_1:71054186-71054205 Msa0222070:intron 40.0%
GCTACTAGAATTTGATCGGA+TGG - chr2_1:71054331-71054350 Msa0222070:intron 40.0%
GAAATCTGCATCCCATGATA+AGG - chr2_1:71054388-71054407 Msa0222070:intron 40.0%
ATCTAACAAAACTGGGGAAG+TGG - chr2_1:71054654-71054673 Msa0222070:intron 40.0%
TATTTGCATGAAGGTGGGTA+TGG - chr2_1:71054770-71054789 Msa0222070:CDS 40.0%
ATTTGCATGAAGGTGGGTAT+GGG - chr2_1:71054771-71054790 Msa0222070:intron 40.0%
ACTTGGCATCCATGATAAAC+CGG - chr2_1:71054832-71054851 Msa0222070:intron 40.0%
ACAATTATATGGCGAGCTGT+GGG + chr2_1:71055043-71055062 None:intergenic 40.0%
!! TTGACAAGCTCTTTTGGTGT+TGG + chr2_1:71055073-71055092 None:intergenic 40.0%
ATCGGTTAAATCGAAACCGT+TGG + chr2_1:71055130-71055149 None:intergenic 40.0%
! GCGATTCAACCGATTTAATG+CGG + chr2_1:71055237-71055256 None:intergenic 40.0%
GCATTAAATCGGTTGAATCG+CGG - chr2_1:71055236-71055255 Msa0222070:intron 40.0%
! ACCATAACCCGAATTTTCAC+TGG - chr2_1:71055308-71055327 Msa0222070:intron 40.0%
! ACCAGTGAAAATTCGGGTTA+TGG + chr2_1:71055312-71055331 None:intergenic 40.0%
! TTCATTTTCCCAGCTTAGCT+TGG + chr2_1:71055419-71055438 None:intergenic 40.0%
GACAACTCAAGGAACTACTA+TGG - chr2_1:71055540-71055559 Msa0222070:five_prime_UTR 40.0%
GTGGTATAAGCGCGGTTATA+TGG + chr2_1:71049996-71050015 None:intergenic 45.0%
!! TTGATGGTGTGGTATAAGCG+CGG + chr2_1:71050004-71050023 None:intergenic 45.0%
!! GATATGAGTGGTTGATGGTG+TGG + chr2_1:71050015-71050034 None:intergenic 45.0%
TCCCAAGCTGTTTATGATGG+TGG - chr2_1:71050480-71050499 Msa0222070:CDS 45.0%
GACCACCATCATAAACAGCT+TGG + chr2_1:71050485-71050504 None:intergenic 45.0%
! GATGGTGGTCGACATGTAAT+TGG - chr2_1:71050495-71050514 Msa0222070:CDS 45.0%
GGCACAATGCGATTATGCTA+GGG + chr2_1:71050590-71050609 None:intergenic 45.0%
TGGCACAATGCGATTATGCT+AGG + chr2_1:71050591-71050610 None:intergenic 45.0%
ATAAACAACCCCAGATTGCC+AGG + chr2_1:71051008-71051027 None:intergenic 45.0%
! CATTGCAAGGCTAATTTGCC+AGG - chr2_1:71051264-71051283 Msa0222070:intron 45.0%
! TTGCCAGGATTAGCGATTAC+AGG - chr2_1:71051279-71051298 Msa0222070:intron 45.0%
! TGCCAGGATTAGCGATTACA+GGG - chr2_1:71051280-71051299 Msa0222070:intron 45.0%
CAGCTTACTGGTGAAACAGT+AGG - chr2_1:71051749-71051768 Msa0222070:intron 45.0%
CAGTAGCTGACATGCATCAA+AGG - chr2_1:71051783-71051802 Msa0222070:intron 45.0%
! GATGCCTTTATAGCCTTACC+AGG - chr2_1:71051830-71051849 Msa0222070:intron 45.0%
CCAACCTGGTAAGGCTATAA+AGG + chr2_1:71051837-71051856 None:intergenic 45.0%
! CCTTTATAGCCTTACCAGGT+TGG - chr2_1:71051834-71051853 Msa0222070:intron 45.0%
GAAGGTTGTTTGTACCAACC+TGG + chr2_1:71051851-71051870 None:intergenic 45.0%
ATTCTAACCGCGTGAACTAG+GGG - chr2_1:71052142-71052161 Msa0222070:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_1:71052520-71052539 None:intergenic 45.0%
GTGTGCTGCGTATTAATTGG+AGG + chr2_1:71052382-71052401 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_1:71052520-71052539 Msa0222070:intron 45.0%
CAATGGAAGAGATGGTGAAG+AGG - chr2_1:71052942-71052961 Msa0222070:intron 45.0%
TCATGGGCCCCTATATCTTT+GGG + chr2_1:71054198-71054217 None:intergenic 45.0%
ATCATGGGCCCCTATATCTT+TGG + chr2_1:71054199-71054218 None:intergenic 45.0%
AGATATAGGGGCCCATGATA+AGG - chr2_1:71054200-71054219 Msa0222070:intron 45.0%
GATATAGGGGCCCATGATAA+GGG - chr2_1:71054201-71054220 Msa0222070:intron 45.0%
TGCGTGAAGCAATTACAGCA+GGG + chr2_1:71054236-71054255 None:intergenic 45.0%
GCCATTGAACACTGATCCAA+CGG - chr2_1:71054269-71054288 Msa0222070:intron 45.0%
ACCGTTGGATCAGTGTTCAA+TGG + chr2_1:71054273-71054292 None:intergenic 45.0%
GACAGAACTATCGTAACCGT+TGG + chr2_1:71054288-71054307 None:intergenic 45.0%
CTAGAATTTGATCGGATGGC+TGG - chr2_1:71054335-71054354 Msa0222070:intron 45.0%
AGATTTCCTGCTGTAACAGC+AGG + chr2_1:71054375-71054394 None:intergenic 45.0%
GAGAAAGCTGCCCTTATCAT+GGG + chr2_1:71054402-71054421 None:intergenic 45.0%
AGAGAAAGCTGCCCTTATCA+TGG + chr2_1:71054403-71054422 None:intergenic 45.0%
GTGGGATTGCTGAATGTTGA+TGG - chr2_1:71054959-71054978 Msa0222070:intron 45.0%
GACTTTCATCGACAAAGCTG+TGG - chr2_1:71055000-71055019 Msa0222070:CDS 45.0%
TTTCATCGACAAAGCTGTGG+AGG - chr2_1:71055003-71055022 Msa0222070:CDS 45.0%
CAATTATATGGCGAGCTGTG+GGG + chr2_1:71055042-71055061 None:intergenic 45.0%
CACAATTATATGGCGAGCTG+TGG + chr2_1:71055044-71055063 None:intergenic 45.0%
AGGCAACTCTTTCATGCTGT+GGG + chr2_1:71055396-71055415 None:intergenic 45.0%
!! ATTTTCCCAGCTTAGCTTGG+AGG + chr2_1:71055416-71055435 None:intergenic 45.0%
!! AATTAAATATTAGATTTATA+TGG + chr2_1:71051198-71051217 None:intergenic 5.0%
!!! AATATAATTTTGATATATTT+TGG + chr2_1:71052607-71052626 None:intergenic 5.0%
GACTCGTCTATAGGGAACCA+AGG + chr2_1:71049908-71049927 None:intergenic 50.0%
! GTGTTTTGTGGTAGTAGCCC+TGG - chr2_1:71050100-71050119 Msa0222070:intron 50.0%
GTTTATGGAGGAGGCAGCAT+TGG - chr2_1:71050441-71050460 Msa0222070:CDS 50.0%
!! AGGAGGCAGCATTGGTTTGA+TGG - chr2_1:71050449-71050468 Msa0222070:CDS 50.0%
!! GGAGGCAGCATTGGTTTGAT+GGG - chr2_1:71050450-71050469 Msa0222070:CDS 50.0%
!! GAGGCAGCATTGGTTTGATG+GGG - chr2_1:71050451-71050470 Msa0222070:CDS 50.0%
GTCCCTGTAATCGCTAATCC+TGG + chr2_1:71051285-71051304 None:intergenic 50.0%
AGAGATACCCCTAGTTCACG+CGG + chr2_1:71052152-71052171 None:intergenic 50.0%
GGAATTTGCAAGAGTGGTGC+AGG - chr2_1:71052838-71052857 Msa0222070:intron 50.0%
GGATCCAGGTCCCTTATCAT+GGG + chr2_1:71054214-71054233 None:intergenic 50.0%
GCGTGAAGCAATTACAGCAG+GGG + chr2_1:71054235-71054254 None:intergenic 50.0%
CTGCGTGAAGCAATTACAGC+AGG + chr2_1:71054237-71054256 None:intergenic 50.0%
GCTGTAATTGCTTCACGCAG+TGG - chr2_1:71054237-71054256 Msa0222070:intron 50.0%
ATAGCACCTGCTGTTACAGC+AGG - chr2_1:71054366-71054385 Msa0222070:intron 50.0%
ATCGACAAAGCTGTGGAGGA+AGG - chr2_1:71055007-71055026 Msa0222070:CDS 50.0%
GAGGCAACTCTTTCATGCTG+TGG + chr2_1:71055397-71055416 None:intergenic 50.0%
AGTTGCCTCCAAGCTAAGCT+GGG - chr2_1:71055408-71055427 Msa0222070:CDS 50.0%
GGGATCCAGGTCCCTTATCA+TGG + chr2_1:71054215-71054234 None:intergenic 55.0%
GCAATTACAGCAGGGGATCC+AGG + chr2_1:71054228-71054247 None:intergenic 55.0%
AGGTGGGTATGGGACACTTG+AGG - chr2_1:71054781-71054800 Msa0222070:intron 55.0%
GACACTTGAGGAGCTCCTTG+AGG - chr2_1:71054793-71054812 Msa0222070:intron 55.0%
GAGTTGCCTCCAAGCTAAGC+TGG - chr2_1:71055407-71055426 Msa0222070:CDS 55.0%
GGCAGTTGGCACGTCACAAG+TGG + chr2_1:71052773-71052792 None:intergenic 60.0%
GGGGCCCATGATAAGGGACC+TGG - chr2_1:71054207-71054226 Msa0222070:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 71049826 71055669 71049826 ID=Msa0222070;Name=Msa0222070
chr2_1 mRNA 71049826 71055669 71049826 ID=Msa0222070-mRNA-1;Parent=Msa0222070;Name=Msa0222070-mRNA-1;_AED=0.08;_eAED=0.08;_QI=226|1|1|1|0.71|0.75|8|191|209
chr2_1 exon 71049826 71049985 71049826 ID=Msa0222070-mRNA-1:exon:20388;Parent=Msa0222070-mRNA-1
chr2_1 exon 71050014 71050110 71050014 ID=Msa0222070-mRNA-1:exon:20387;Parent=Msa0222070-mRNA-1
chr2_1 exon 71050393 71050536 71050393 ID=Msa0222070-mRNA-1:exon:20386;Parent=Msa0222070-mRNA-1
chr2_1 exon 71050642 71050712 71050642 ID=Msa0222070-mRNA-1:exon:20385;Parent=Msa0222070-mRNA-1
chr2_1 exon 71053644 71053743 71053644 ID=Msa0222070-mRNA-1:exon:20384;Parent=Msa0222070-mRNA-1
chr2_1 exon 71054759 71054789 71054759 ID=Msa0222070-mRNA-1:exon:20383;Parent=Msa0222070-mRNA-1
chr2_1 exon 71054978 71055075 71054978 ID=Msa0222070-mRNA-1:exon:20382;Parent=Msa0222070-mRNA-1
chr2_1 exon 71055324 71055669 71055324 ID=Msa0222070-mRNA-1:exon:20381;Parent=Msa0222070-mRNA-1
chr2_1 five_prime_UTR 71055444 71055669 71055444 ID=Msa0222070-mRNA-1:five_prime_utr;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71055324 71055443 71055324 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71054978 71055075 71054978 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71054759 71054789 71054759 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71053644 71053743 71053644 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71050642 71050712 71050642 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71050393 71050536 71050393 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 CDS 71050045 71050110 71050045 ID=Msa0222070-mRNA-1:cds;Parent=Msa0222070-mRNA-1
chr2_1 three_prime_UTR 71050014 71050044 71050014 ID=Msa0222070-mRNA-1:three_prime_utr;Parent=Msa0222070-mRNA-1
chr2_1 three_prime_UTR 71049826 71049985 71049826 ID=Msa0222070-mRNA-1:three_prime_utr;Parent=Msa0222070-mRNA-1
Gene Sequence

>Msa0222070

ATGGAGAGAGAGATAGAGATGAAGCTATCAAAGTTTAAGAGAATTTGTGTGTTTTGTGGTAGTAGCCCTGGTAACAAAACTAGCTATAAGGATGCTGCTATTGAACTTGGAAAAGAATTGGTTTCAAGAAATATTGATCTAGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCCCAAGCTGTTTATGATGGTGGTCGACATGTAATTGGAGTGATTCCCAAAACACTAATGCCAAGAGAGCTTACTGGTGAAACAGTAGGAGAAGTGAAAGCAGTAGCTGACATGCATCAAAGGAAAGCTGAAATGGCTAGAAATTCTGATGCCTTTATAGCCTTACCAGGTGGGTATGGGACACTTGAGGAGCTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATTCCTTTTTGACTTTCATCGACAAAGCTGTGGAGGAAGGATTCATTAGCCCCACAGCTCGCCATATAATTGTGTCTGCACCAACACCAAAAGAGCTTGTCAAAAATATGGAGGAGTATTTCCCACAGCATGAAAGAGTTGCCTCCAAGCTAAGCTGGGAAAATGAACAGCTAGATTAG

Protein sequence

>Msa0222070

MEREIEMKLSKFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMARNSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLTFIDKAVEEGFISPTARHIIVSAPTPKELVKNMEEYFPQHERVASKLSWENEQLD*