AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1162430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162430 MtrunA17_Chr7g0258321 95.949 469 6 4 1 461 1 464 0.0 920
Msa1162430 MtrunA17_Chr1g0174701 73.363 443 89 8 47 461 66 507 0.0 632
Msa1162430 MtrunA17_Chr8g0353501 51.295 386 157 9 87 459 98 465 7.59e-123 366
Msa1162430 MtrunA17_Chr7g0256211 59.477 306 106 6 164 460 156 452 1.89e-122 364
Msa1162430 MtrunA17_Chr2g0321431 56.271 295 110 3 171 460 189 469 4.85e-114 344
Msa1162430 MtrunA17_Chr4g0026401 53.746 307 116 5 159 460 176 461 2.55e-106 324
Msa1162430 MtrunA17_Chr5g0422771 50.485 309 138 4 160 460 163 464 1.17e-100 309
Msa1162430 MtrunA17_Chr3g0124601 49.057 318 150 3 148 460 51 361 5.70e-100 303
Msa1162430 MtrunA17_Chr1g0210151 47.975 321 150 5 146 460 31 340 2.89e-96 293
Msa1162430 MtrunA17_Chr5g0424861 44.315 343 170 6 122 457 19 347 2.44e-84 263
Msa1162430 MtrunA17_Chr8g0382861 44.771 306 156 4 160 460 59 356 2.65e-82 258
Msa1162430 MtrunA17_Chr3g0115371 44.248 339 166 7 128 458 24 347 4.80e-80 252
Msa1162430 MtrunA17_Chr5g0424851 42.920 226 119 3 238 457 1 222 5.87e-53 184
Msa1162430 MtrunA17_Chr5g0424851 42.991 214 113 2 240 448 217 426 1.02e-51 180
Msa1162430 MtrunA17_Chr3g0093451 44.670 197 88 6 146 330 22 209 3.36e-48 164
Msa1162430 MtrunA17_Chr1g0196951 31.156 199 115 6 260 453 59 240 3.89e-19 86.7
Msa1162430 MtrunA17_Chr7g0242651 25.112 223 138 5 248 450 6 219 2.09e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1162430 AT5G06839.3 59.050 442 134 12 63 461 22 459 7.53e-170 486
Msa1162430 AT5G06839.1 59.716 422 120 11 63 461 22 416 4.93e-167 477
Msa1162430 AT5G06839.2 59.338 423 121 11 63 461 22 417 2.30e-166 475
Msa1162430 AT1G08320.2 54.023 348 127 9 118 460 10 329 2.32e-121 358
Msa1162430 AT1G08320.5 54.023 348 127 9 118 460 10 329 2.32e-121 358
Msa1162430 AT1G08320.1 53.448 348 129 8 118 460 134 453 3.75e-119 357
Msa1162430 AT1G08320.4 53.448 348 129 8 118 460 134 453 3.75e-119 357
Msa1162430 AT1G08320.3 53.448 348 129 8 118 460 134 453 3.75e-119 357
Msa1162430 AT5G06950.2 52.769 307 131 3 161 460 31 330 3.12e-109 326
Msa1162430 AT5G06950.4 52.769 307 131 3 161 460 31 330 3.12e-109 326
Msa1162430 AT5G06950.1 52.769 307 131 3 161 460 31 330 3.12e-109 326
Msa1162430 AT5G06950.5 52.769 307 131 3 161 460 31 330 3.12e-109 326
Msa1162430 AT5G06950.3 52.769 307 131 3 161 460 31 330 3.12e-109 326
Msa1162430 AT3G12250.6 51.592 314 138 4 154 460 24 330 8.38e-109 325
Msa1162430 AT3G12250.2 51.592 314 138 4 154 460 24 330 8.38e-109 325
Msa1162430 AT3G12250.7 51.592 314 138 4 154 460 24 330 8.38e-109 325
Msa1162430 AT3G12250.1 51.592 314 138 4 154 460 24 330 8.38e-109 325
Msa1162430 AT3G12250.3 51.592 314 138 4 154 460 18 324 3.07e-108 323
Msa1162430 AT3G12250.4 50.303 330 147 5 138 460 36 355 4.50e-108 324
Msa1162430 AT3G12250.5 52.273 308 133 4 160 460 3 303 7.82e-108 322
Msa1162430 AT5G06960.2 54.422 294 120 4 174 460 44 330 2.19e-104 314
Msa1162430 AT5G06960.1 54.422 294 120 4 174 460 44 330 2.19e-104 314
Msa1162430 AT5G06960.3 54.422 294 120 4 174 460 24 310 3.20e-104 313
Msa1162430 AT1G68640.1 52.288 306 134 4 161 459 151 451 1.83e-100 308
Msa1162430 AT5G10030.5 50.512 293 132 4 173 460 78 362 1.90e-95 292
Msa1162430 AT5G10030.3 50.512 293 132 4 173 460 78 362 1.90e-95 292
Msa1162430 AT5G10030.1 50.512 293 132 4 173 460 78 362 1.90e-95 292
Msa1162430 AT5G10030.4 50.512 293 132 4 173 460 78 362 1.90e-95 292
Msa1162430 AT5G10030.2 50.512 293 132 4 173 460 78 362 1.90e-95 292
Msa1162430 AT1G22070.1 51.623 308 132 6 161 460 84 382 2.16e-95 293
Msa1162430 AT1G77920.1 48.852 305 135 3 161 460 78 366 7.05e-94 288
Msa1162430 AT5G65210.6 48.684 304 138 5 162 460 6 296 1.36e-92 283
Msa1162430 AT5G65210.5 47.003 317 152 5 152 460 58 366 3.70e-92 284
Msa1162430 AT5G65210.7 47.003 317 152 5 152 460 58 366 3.70e-92 284
Msa1162430 AT5G65210.3 47.003 317 152 5 152 460 58 366 3.70e-92 284
Msa1162430 AT5G65210.1 47.003 317 152 5 152 460 58 366 3.70e-92 284
Msa1162430 AT5G65210.2 47.003 317 152 5 152 460 58 366 3.70e-92 284
Msa1162430 AT5G65210.4 47.003 317 152 5 152 460 58 366 3.70e-92 284
Msa1162430 AT1G58330.1 25.974 231 137 5 244 450 3 223 6.01e-15 74.3

Find 106 sgRNAs with CRISPR-Local

Find 573 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATATTTCATCTTGTTTC+TGG 0.146768 7_4:-53132518 Msa1162430:CDS
GCAATGTTCGACGTGGAATA+TGG 0.213554 7_4:-53132692 Msa1162430:CDS
GTCCATTAAGATAGAGAAAA+AGG 0.218834 7_4:+53134617 None:intergenic
GATCATAATCAAATTTCTTT+TGG 0.221378 7_4:-53134857 Msa1162430:CDS
CAACAAATAATGGGCATATA+TGG 0.268804 7_4:-53131556 Msa1162430:CDS
AATGTTTGTGGACAAATTCT+TGG 0.284617 7_4:-53132588 Msa1162430:CDS
GTCCATGTAGTTGGTCATAT+TGG 0.290454 7_4:+53131426 None:intergenic
AGCTTATGATTTGGGTGAAT+TGG 0.294739 7_4:-53134647 Msa1162430:CDS
TAAGCCTTCTGAACTCATTA+AGG 0.295051 7_4:-53132447 Msa1162430:intron
ATTGACCGAGCAACAAATAA+TGG 0.298535 7_4:-53131566 Msa1162430:CDS
GATTCGGGAGCTTATGATTT+GGG 0.302566 7_4:-53134655 Msa1162430:CDS
TGTACGTGCCTTAACAGCTT+TGG 0.332582 7_4:+53133696 None:intergenic
CACATGAAGCAACGTTCAAT+TGG 0.341843 7_4:+53132482 None:intergenic
TCCATGTAGTTGGTCATATT+GGG 0.346409 7_4:+53131427 None:intergenic
TATTAATTACACCTTAGAAT+TGG 0.350406 7_4:+53133865 None:intergenic
GTACGTGCCTTAACAGCTTT+GGG 0.362416 7_4:+53133697 None:intergenic
TGTTCATGGCCCTTGCCATT+TGG 0.365190 7_4:+53131404 None:intergenic
GCCATCATCGTCCAATTCTA+AGG 0.366357 7_4:-53133876 Msa1162430:intron
GGGTGGCTCTGATCCTCTCT+TGG 0.372781 7_4:+53133717 None:intergenic
TGCCATTTGGTCCATGTAGT+TGG 0.373834 7_4:+53131417 None:intergenic
TTCATCTTGTTTCTGGCATG+TGG 0.389553 7_4:-53132511 Msa1162430:CDS
TTTGGTGGAGGTGCAATGTT+GGG 0.390194 7_4:-53132838 Msa1162430:CDS
AGATTCGGGAGCTTATGATT+TGG 0.391428 7_4:-53134656 Msa1162430:CDS
AAGAGTGGAGAGTTTGTTCA+TGG 0.395292 7_4:+53131390 None:intergenic
AGTTGAGTAGTGGTTTGGTT+TGG 0.401033 7_4:+53134965 None:intergenic
GTTCTAGTTGAGTAGTGGTT+TGG 0.401946 7_4:+53134960 None:intergenic
ACATGAAGCAACGTTCAATT+GGG 0.406516 7_4:+53132483 None:intergenic
ATTATTTGTTGCTCGGTCAA+TGG 0.410343 7_4:+53131568 None:intergenic
TCATGTTCTGAACTTGAAGT+TGG 0.414083 7_4:+53133415 None:intergenic
GTCAGCAGAAATAAAGATTC+GGG 0.416098 7_4:-53134670 Msa1162430:intron
TCTTCATCACCCTCTGTCCT+TGG 0.418587 7_4:-53134821 Msa1162430:CDS
CTCTTGGATCCACTTGTTTG+CGG 0.419959 7_4:+53133733 None:intergenic
ATTTGATTATGATCATGTAT+TGG 0.421851 7_4:+53134866 None:intergenic
AGAGATCACACCTGAGCTAA+TGG 0.429073 7_4:+53132786 None:intergenic
GAGCTAATGGTATTCATAGA+AGG 0.438872 7_4:+53132799 None:intergenic
TGTCAGCAGAAATAAAGATT+CGG 0.439709 7_4:-53134671 Msa1162430:intron
TATGCCCATTATTTGTTGCT+CGG 0.446315 7_4:+53131561 None:intergenic
CTTTGGTGGAGGTGCAATGT+TGG 0.447414 7_4:-53132839 Msa1162430:CDS
GACCAACTACATGGACCAAA+TGG 0.454379 7_4:-53131419 Msa1162430:CDS
TGATGACGGTGTTGAGGTGG+TGG 0.456563 7_4:+53134932 None:intergenic
ATTGCAACAATCTACACAAC+AGG 0.456913 7_4:-53131533 Msa1162430:CDS
CAATGTTCGACGTGGAATAT+GGG 0.457912 7_4:-53132691 Msa1162430:CDS
TTGACCGAGCAACAAATAAT+GGG 0.460762 7_4:-53131565 Msa1162430:CDS
TAGGGCATGTTCTTTGGTGG+AGG 0.462298 7_4:-53132850 Msa1162430:CDS
GATCTGATTCAGACGATGAA+TGG 0.463347 7_4:+53125531 Msa1162440:CDS
AAAGAGTTAACCTTAGGATC+TGG 0.468362 7_4:+53133379 None:intergenic
TCCACAGAAAATTCAACATC+AGG 0.468688 7_4:-53133950 Msa1162430:intron
CTCTTAGTTCACATACTAAA+CGG 0.475671 7_4:+53132648 None:intergenic
CGTTGCTTCATGTGGATTGG+TGG 0.475727 7_4:-53132473 Msa1162430:CDS
GAATGAGCTTAGAATGTTTG+TGG 0.479362 7_4:-53132600 Msa1162430:CDS
CGGTGTTGAGGTGGTGGGAG+TGG 0.482044 7_4:+53134938 None:intergenic
ACCTTAGAATTGGACGATGA+TGG 0.485367 7_4:+53133875 None:intergenic
CAAACTTAATCAGATGGAAC+AGG 0.485599 7_4:-53132977 Msa1162430:CDS
AACATTCTAAGCTCATTCTC+AGG 0.491670 7_4:+53132605 None:intergenic
ACCTAAAACACCAGATCCTA+AGG 0.513193 7_4:-53133389 Msa1162430:intron
CAATTGAACGTTGCTTCATG+TGG 0.518218 7_4:-53132481 Msa1162430:CDS
TCATCTTGTTTCTGGCATGT+GGG 0.519428 7_4:-53132510 Msa1162430:CDS
GAACGTTGCTTCATGTGGAT+TGG 0.530260 7_4:-53132476 Msa1162430:CDS
GAGTGGTTCTAGTTGAGTAG+TGG 0.532015 7_4:+53134955 None:intergenic
GATTCAGACGATGAATGGTT+TGG 0.540713 7_4:+53125536 Msa1162440:CDS
TTTGGTCTTGAACACTGGAT+GGG 0.540777 7_4:+53134587 None:intergenic
CAGAATCAAACTTAATCAGA+TGG 0.550271 7_4:-53132983 Msa1162430:CDS
GGAGAAGAGGCTCTCTCTCA+AGG 0.552488 7_4:-53131511 Msa1162430:CDS
TCCCAATATGACCAACTACA+TGG 0.555270 7_4:-53131428 Msa1162430:CDS
GAACTCACATGTAGTTTCCA+AGG 0.555892 7_4:+53134804 None:intergenic
ATCTACACAACAGGGAGAAG+AGG 0.560351 7_4:-53131524 Msa1162430:CDS
GGCTCTCTCTCAAGGACTTG+AGG 0.560629 7_4:-53131503 Msa1162430:CDS
AAAATTCAACATCAGGAATG+AGG 0.564641 7_4:-53133943 Msa1162430:CDS
AACTCAATGCTCGCATACGA+TGG 0.565611 7_4:+53125458 None:intergenic
TCTACATGCATAGGCTGAGA+AGG 0.566999 7_4:+53133899 None:intergenic
TCTATGAATACCATTAGCTC+AGG 0.570910 7_4:-53132796 Msa1162430:intron
TCTTGAAAGTTTCGTGAGAG+AGG 0.574448 7_4:-53131371 Msa1162430:intron
CCTACCTTAATGAGTTCAGA+AGG 0.576512 7_4:+53132443 None:intergenic
GCAATGTTGGGAGGAGAACA+AGG 0.577141 7_4:-53132826 Msa1162430:CDS
ATTGGATGATGATGATGTTG+TGG 0.582586 7_4:+53134884 None:intergenic
TTAGTTTCTCCGCAAACAAG+TGG 0.585262 7_4:-53133742 Msa1162430:CDS
GATGATGAATTTGATGATGA+CGG 0.596752 7_4:+53134918 None:intergenic
GATGATGGCTCTACATGCAT+AGG 0.601506 7_4:+53133890 None:intergenic
GGAATATGGGAGGTGGCTTG+AGG 0.602851 7_4:-53132678 Msa1162430:CDS
TGATGATGACGGTGTTGAGG+TGG 0.603280 7_4:+53134929 None:intergenic
GGTGGAGGTGCAATGTTGGG+AGG 0.609507 7_4:-53132835 Msa1162430:CDS
TCGACGTGGAATATGGGAGG+TGG 0.616956 7_4:-53132685 Msa1162430:CDS
TCTCACGAAACTTTCAAGAG+TGG 0.621714 7_4:+53131375 None:intergenic
GCGAGCATTGAGTTCTCTGT+GGG 0.622812 7_4:-53125449 Msa1162430:CDS
TAACGACGCGTCAAGCAGCA+AGG 0.625480 7_4:-53125507 Msa1162430:CDS
TAATGGTATTCATAGAAGGA+AGG 0.626256 7_4:+53132803 None:intergenic
GATGACGGTGTTGAGGTGGT+GGG 0.626282 7_4:+53134933 None:intergenic
ACTACATGGACCAAATGGCA+AGG 0.628760 7_4:-53131414 Msa1162430:CDS
ATTTGATGATGACGGTGTTG+AGG 0.632863 7_4:+53134926 None:intergenic
ATGTAGTTTCCAAGGACAGA+GGG 0.634416 7_4:+53134812 None:intergenic
CATGAAGCAACGTTCAATTG+GGG 0.638346 7_4:+53132484 None:intergenic
ATGTAGTTGGTCATATTGGG+AGG 0.641383 7_4:+53131430 None:intergenic
CAAACAAGTGGATCCAAGAG+AGG 0.644811 7_4:-53133730 Msa1162430:CDS
CGTGCCTTAACAGCTTTGGG+TGG 0.648085 7_4:+53133700 None:intergenic
AGCATTGAGTTCTCTGTGGG+TGG 0.652494 7_4:-53125446 Msa1162430:CDS
ACGATGGAAGTACTCAGCCA+TGG 0.660105 7_4:+53125474 Msa1162440:CDS
TGCGAGCATTGAGTTCTCTG+TGG 0.661165 7_4:-53125450 Msa1162430:CDS
ACTGAATGCTATTCTTGACG+AGG 0.667157 7_4:+53125418 None:intergenic
CATGTAGTTTCCAAGGACAG+AGG 0.674553 7_4:+53134811 None:intergenic
ACTTCAAGTTCAGAACATGA+AGG 0.675723 7_4:-53133412 Msa1162430:CDS
CTACATGGACCAAATGGCAA+GGG 0.682858 7_4:-53131413 Msa1162430:CDS
TGTTCGACGTGGAATATGGG+AGG 0.683888 7_4:-53132688 Msa1162430:CDS
AGAGGCTGCAATGTTCGACG+TGG 0.690011 7_4:-53132699 Msa1162430:CDS
CTGAATGCTATTCTTGACGA+GGG 0.692425 7_4:+53125419 None:intergenic
TTGCAACAATCTACACAACA+GGG 0.697295 7_4:-53131532 Msa1162430:CDS
TTAGTTCACATACTAAACGG+TGG 0.740777 7_4:+53132651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAATTATTTTAT+AGG - chr7_4:53126636-53126655 Msa1162430:intron 0.0%
!! TAAACTATTAATTAACATAT+TGG + chr7_4:53126759-53126778 Msa1162440:intron 10.0%
!!! TTACTTTTTTTTATTCTTTT+TGG - chr7_4:53127139-53127158 Msa1162430:intron 10.0%
!!! TTTATTGTTATTTCTATTTT+AGG - chr7_4:53127543-53127562 Msa1162430:intron 10.0%
!!! TTATTGTTATTTCTATTTTA+GGG - chr7_4:53127544-53127563 Msa1162430:intron 10.0%
!! ATTTCAAATATTTATATAAG+AGG + chr7_4:53127684-53127703 Msa1162440:intron 10.0%
!!! ATTTTATGATAATTTTTATG+CGG - chr7_4:53128144-53128163 Msa1162430:intron 10.0%
!!! TAAATTAAACGATTTTAAAT+CGG + chr7_4:53129444-53129463 Msa1162440:intron 10.0%
!!! TAAAATCGTTTAATTTAAAT+CGG - chr7_4:53129447-53129466 Msa1162430:intron 10.0%
!!! TAAATTAAAAGATTTTAGAT+GGG + chr7_4:53129478-53129497 Msa1162440:intron 10.0%
!!! TAAAATCTTTTAATTTACAT+CGG - chr7_4:53129481-53129500 Msa1162430:intron 10.0%
!! AAATATCTGATAATTTAAAT+CGG - chr7_4:53129536-53129555 Msa1162430:intron 10.0%
!!! AAAACATATAGATTTTAAAT+GGG + chr7_4:53129567-53129586 Msa1162440:CDS 10.0%
!!! TAAAACATATAGATTTTAAA+TGG + chr7_4:53129568-53129587 Msa1162440:CDS 10.0%
!!! ATTAAAATACTTTTTAAATC+TGG - chr7_4:53132553-53132572 Msa1162430:intron 10.0%
!!! TTAAATCATACATTTTAAAT+GGG + chr7_4:53132650-53132669 None:intergenic 10.0%
!!! ATTAAATCATACATTTTAAA+TGG + chr7_4:53132651-53132670 None:intergenic 10.0%
!!! TATATATTTTTTAAAGTGAT+TGG - chr7_4:53132959-53132978 Msa1162430:CDS 10.0%
!!! TTTTTTTGAAAGAAAATTTA+TGG - chr7_4:53133530-53133549 Msa1162430:intron 10.0%
!!! TTCTTTCTTTTTTCTAAAAA+AGG - chr7_4:53126136-53126155 Msa1162430:intron 15.0%
!!! TCTTTCTTTTTTCTAAAAAA+GGG - chr7_4:53126137-53126156 Msa1162430:intron 15.0%
!! TCAAAAAAATAATAAGAGTT+TGG - chr7_4:53126819-53126838 Msa1162430:intron 15.0%
!! AGGATAAAGAAAATAATAAT+AGG + chr7_4:53126914-53126933 Msa1162440:intron 15.0%
!! AATATTATAAAGTTGAACTT+TGG - chr7_4:53128118-53128137 Msa1162430:intron 15.0%
!! ATTTCTTAATCAATGTTATA+AGG + chr7_4:53128390-53128409 Msa1162440:intron 15.0%
!! CTTATTGTTAATGAAATTAT+GGG - chr7_4:53128482-53128501 Msa1162430:intron 15.0%
!!! TTTTTTTTTTAGATGACAAA+AGG + chr7_4:53129179-53129198 Msa1162440:intron 15.0%
!!! TGTATATATTAGTGATTTTT+AGG - chr7_4:53129274-53129293 Msa1162430:intron 15.0%
!!! AAATTAAACGATTTTAAATC+GGG + chr7_4:53129443-53129462 Msa1162440:intron 15.0%
!!! GTAAATTAAAAGATTTTAGA+TGG + chr7_4:53129479-53129498 Msa1162440:intron 15.0%
!!! AAACATATAGATTTTAAATG+GGG + chr7_4:53129566-53129585 Msa1162440:CDS 15.0%
!! TATATGATATTTCATATTAG+TGG + chr7_4:53129656-53129675 Msa1162440:intron 15.0%
!! AACTTTATATTGAATGTATT+TGG + chr7_4:53129906-53129925 Msa1162440:CDS 15.0%
!!! CTAGTATTTTATATTGTTTT+GGG + chr7_4:53130572-53130591 Msa1162440:CDS 15.0%
!!! TCTAGTATTTTATATTGTTT+TGG + chr7_4:53130573-53130592 Msa1162440:CDS 15.0%
!!! ATCTGATGTTTTTATAAAAA+GGG + chr7_4:53130694-53130713 Msa1162440:three_prime_UTR 15.0%
!! AATAAAACTAAAAAGAAACA+CGG + chr7_4:53132525-53132544 None:intergenic 15.0%
!! TGTTTAGAAAGAATTTAAAT+GGG + chr7_4:53132583-53132602 None:intergenic 15.0%
!! TTGTTTAGAAAGAATTTAAA+TGG + chr7_4:53132584-53132603 None:intergenic 15.0%
!!! AATTTTCTTTGTGAAATTTA+TGG - chr7_4:53133495-53133514 Msa1162430:intron 15.0%
!!! AAAATTTTGTTTGTTAACTA+TGG - chr7_4:53133717-53133736 Msa1162430:CDS 15.0%
!!! AAATTTTGTTTGTTAACTAT+GGG - chr7_4:53133718-53133737 Msa1162430:CDS 15.0%
!! ATCATTATCATTAGTATATA+TGG + chr7_4:53133971-53133990 None:intergenic 15.0%
!! CAAGAATAATAAATAGTTAT+AGG + chr7_4:53134376-53134395 None:intergenic 15.0%
!!! TTTATTATTCTTGTTTTCAA+AGG - chr7_4:53134383-53134402 Msa1162430:intron 15.0%
!! GTTTAAAAAAAGAAAATAAC+TGG - chr7_4:53134809-53134828 Msa1162430:intron 15.0%
!! ATTTGATTATGATCATGTAT+TGG + chr7_4:53125549-53125568 Msa1162440:CDS 20.0%
!!! GATCATAATCAAATTTCTTT+TGG - chr7_4:53125555-53125574 Msa1162430:CDS 20.0%
!!! AAAAAAAAAACTCACGTTTT+TGG + chr7_4:53125846-53125865 Msa1162440:intron 20.0%
!! AATGATAGAATGAATAAAGA+GGG + chr7_4:53126336-53126355 Msa1162440:intron 20.0%
!! AAATGATAGAATGAATAAAG+AGG + chr7_4:53126337-53126356 Msa1162440:intron 20.0%
!! TATTAATTACACCTTAGAAT+TGG + chr7_4:53126550-53126569 Msa1162440:intron 20.0%
!! TTTGTTACACTTCATATTAA+TGG - chr7_4:53126612-53126631 Msa1162430:intron 20.0%
!! AAGAAACAATTATAAGAGTT+TGG - chr7_4:53126792-53126811 Msa1162430:intron 20.0%
!! ATAAAATGTGGATATGAAAT+GGG + chr7_4:53127111-53127130 Msa1162440:intron 20.0%
!!! GTTTTTACATTTTTTGTCAA+TGG - chr7_4:53127333-53127352 Msa1162430:intron 20.0%
!!! TTTTATTTGTACTCTTTTTC+AGG - chr7_4:53127381-53127400 Msa1162430:intron 20.0%
!! AAACAAGAAAAATATCTTCA+TGG - chr7_4:53127487-53127506 Msa1162430:intron 20.0%
!!! ATTTGAAATGAATATTTCAG+AGG - chr7_4:53127695-53127714 Msa1162430:intron 20.0%
!! ATTCATAAACTTAGTATTGT+CGG - chr7_4:53128231-53128250 Msa1162430:intron 20.0%
!! TTAATCAATGTTATAAGGTA+TGG + chr7_4:53128385-53128404 Msa1162440:intron 20.0%
!! CCATAATTTCATTAACAATA+AGG + chr7_4:53128484-53128503 Msa1162440:intron 20.0%
!! CCTTATTGTTAATGAAATTA+TGG - chr7_4:53128481-53128500 Msa1162430:intron 20.0%
!! TCAATACTAATACTATAAGA+GGG + chr7_4:53128624-53128643 Msa1162440:CDS 20.0%
!! ATCAATACTAATACTATAAG+AGG + chr7_4:53128625-53128644 Msa1162440:CDS 20.0%
!! AGAAACATAAAAATCACATT+TGG + chr7_4:53128785-53128804 Msa1162440:intron 20.0%
!! AAATAATAGTATTTGCGAAT+AGG - chr7_4:53129107-53129126 Msa1162430:intron 20.0%
!! CATATAGATATTGTTAATCA+TGG - chr7_4:53129230-53129249 Msa1162430:intron 20.0%
!!! TATATTAGTGATTTTTAGGA+TGG - chr7_4:53129278-53129297 Msa1162430:intron 20.0%
!!! GTGAATATGACTTTTTAAAT+CGG - chr7_4:53129352-53129371 Msa1162430:intron 20.0%
!!! TGAATATGACTTTTTAAATC+GGG - chr7_4:53129353-53129372 Msa1162430:intron 20.0%
!!! ATCAAATCCACTTTTTAAAT+CGG + chr7_4:53129401-53129420 Msa1162440:intron 20.0%
!!! CTTGTTAACCTTTTTTAAAT+GGG + chr7_4:53129512-53129531 Msa1162440:intron 20.0%
!!! TCTTGTTAACCTTTTTTAAA+TGG + chr7_4:53129513-53129532 Msa1162440:intron 20.0%
!!! TTTTTTTTAAAACACGGTTA+TGG - chr7_4:53129589-53129608 Msa1162430:intron 20.0%
!!! GGTTTTATATATTGTAACTT+TGG + chr7_4:53129725-53129744 Msa1162440:CDS 20.0%
!!! TTTGTACTTTTAATGTTTTC+AGG + chr7_4:53130373-53130392 Msa1162440:CDS 20.0%
!!! CATCTGATGTTTTTATAAAA+AGG + chr7_4:53130695-53130714 Msa1162440:three_prime_UTR 20.0%
!! ATGATGTTTATTGTTTGATT+TGG + chr7_4:53130743-53130762 Msa1162440:three_prime_UTR 20.0%
!!! ATTTGTGTGTTTTTTTGTTT+AGG + chr7_4:53130939-53130958 None:intergenic 20.0%
!! TTATACAATAGTATAGTATC+AGG + chr7_4:53131127-53131146 None:intergenic 20.0%
!! ATTTATCAGATTATTCTGTT+GGG + chr7_4:53131454-53131473 None:intergenic 20.0%
!! TATTTATCAGATTATTCTGT+TGG + chr7_4:53131455-53131474 None:intergenic 20.0%
!!! TGGTGTTATTATATCATAAA+TGG + chr7_4:53131581-53131600 None:intergenic 20.0%
!! AATTTACTTCAACAATACAT+TGG + chr7_4:53131648-53131667 None:intergenic 20.0%
!!! ATTTAATTTTTGTTCTTCAG+TGG + chr7_4:53132205-53132224 None:intergenic 20.0%
!! GTTTAGAAAGAATTTAAATG+GGG + chr7_4:53132582-53132601 None:intergenic 20.0%
!! GATTTAAAAAGATGAAAAGT+GGG + chr7_4:53132614-53132633 None:intergenic 20.0%
!! TGATTTAAAAAGATGAAAAG+TGG + chr7_4:53132615-53132634 None:intergenic 20.0%
!!! TTTCATCTTTTTAAATCAAG+TGG - chr7_4:53132617-53132636 Msa1162430:CDS 20.0%
!! AAATTCAAAAAGGATGTTAT+GGG + chr7_4:53133277-53133296 None:intergenic 20.0%
!! AAAATTCAAAAAGGATGTTA+TGG + chr7_4:53133278-53133297 None:intergenic 20.0%
!!! CTTTTAGTCAAAATTCAAAA+AGG + chr7_4:53133287-53133306 None:intergenic 20.0%
!!! ATTTTGACTAAAAGTACAAA+CGG - chr7_4:53133293-53133312 Msa1162430:intron 20.0%
!! TAGAAGAAAACAAAATGATA+TGG + chr7_4:53133399-53133418 None:intergenic 20.0%
!!! ATATCATTTTGTTTTCTTCT+AGG - chr7_4:53133398-53133417 Msa1162430:CDS 20.0%
!! AAAAAAATCACACTATATTG+TGG + chr7_4:53133576-53133595 None:intergenic 20.0%
!!! AATTTTGTATATTTGCTTGT+GGG + chr7_4:53133703-53133722 None:intergenic 20.0%
!!! AAATTTTGTATATTTGCTTG+TGG + chr7_4:53133704-53133723 None:intergenic 20.0%
!! CAAATTAACACATATGATAT+TGG + chr7_4:53133786-53133805 None:intergenic 20.0%
!! TAGATTCAAAGATGTATAAT+TGG + chr7_4:53133888-53133907 None:intergenic 20.0%
!! GTTATAGATAACCAAAATTT+CGG - chr7_4:53134310-53134329 Msa1162430:intron 20.0%
!!! TATTTTTTTAGACGATTCAA+CGG - chr7_4:53134755-53134774 Msa1162430:intron 20.0%
! GTGTCTTACGTTAAAAAAAT+TGG - chr7_4:53125683-53125702 Msa1162430:intron 25.0%
! TCCATTAAGATAGAGAAAAA+GGG + chr7_4:53125797-53125816 Msa1162440:intron 25.0%
! ATTTCAAGCAAAACGTTATT+GGG + chr7_4:53125923-53125942 Msa1162440:intron 25.0%
! AATTTCAAGCAAAACGTTAT+TGG + chr7_4:53125924-53125943 Msa1162440:intron 25.0%
! TTGCTTGAAATTCAAAAAGA+AGG - chr7_4:53125932-53125951 Msa1162430:intron 25.0%
! TATAACAAACCAAAAGTGAA+AGG + chr7_4:53125966-53125985 Msa1162440:intron 25.0%
! AAATATTTACTAGAGAAGAG+AGG - chr7_4:53126230-53126249 Msa1162430:intron 25.0%
! CTATTTAATGTTGCTGAATT+TGG - chr7_4:53126425-53126444 Msa1162430:intron 25.0%
!!! AATTATTTTATAGGCTAGCA+TGG - chr7_4:53126645-53126664 Msa1162430:intron 25.0%
! AAGATTAAAGAGTTAACCTT+AGG + chr7_4:53127042-53127061 Msa1162440:intron 25.0%
! TAAAATGTGGATATGAAATG+GGG + chr7_4:53127110-53127129 Msa1162440:intron 25.0%
! GATAAAATGTGGATATGAAA+TGG + chr7_4:53127112-53127131 Msa1162440:intron 25.0%
! GTAACAAGATTGATAAAATG+TGG + chr7_4:53127123-53127142 Msa1162440:intron 25.0%
! GTAAAAACACAACACAAATA+TGG + chr7_4:53127321-53127340 Msa1162440:intron 25.0%
! TGATTAAACATGCATTATGA+TGG + chr7_4:53127655-53127674 Msa1162440:intron 25.0%
!! GATATATTTCATCTTGTTTC+TGG - chr7_4:53127894-53127913 Msa1162430:intron 25.0%
! TGTTAAATAGTGTTAAGTCA+TGG + chr7_4:53128036-53128055 Msa1162440:intron 25.0%
!! ATAATTTTTATGCGGAGAAT+AGG - chr7_4:53128152-53128171 Msa1162430:intron 25.0%
!! TAATTTTTATGCGGAGAATA+GGG - chr7_4:53128153-53128172 Msa1162430:intron 25.0%
! TAACGTTATAGTCATTCAAA+AGG - chr7_4:53128188-53128207 Msa1162430:intron 25.0%
!! TGAAGATTTTCCATATTGTA+CGG - chr7_4:53128332-53128351 Msa1162430:intron 25.0%
! TAGTTGTTGAATTCAATGTT+AGG - chr7_4:53128703-53128722 Msa1162430:intron 25.0%
!!! GCAGAAAACACTTTTTAAAT+CGG - chr7_4:53129329-53129348 Msa1162430:intron 25.0%
!!! CAGAAAACACTTTTTAAATC+GGG - chr7_4:53129330-53129349 Msa1162430:intron 25.0%
! TTTGATATTGTAACAATGAC+AGG + chr7_4:53129697-53129716 Msa1162440:intron 25.0%
!!! AACAATGTTTAGCTTTTGTT+TGG + chr7_4:53129746-53129765 Msa1162440:CDS 25.0%
!! TTTTACATAAGCTAGAAGTT+TGG - chr7_4:53130168-53130187 Msa1162430:intron 25.0%
!! TATTGATTGTGAATTCTGTT+TGG + chr7_4:53130418-53130437 Msa1162440:CDS 25.0%
!! TAATGATATTTCTGTGGTAA+TGG + chr7_4:53130450-53130469 Msa1162440:CDS 25.0%
!!! AGGATGTTTTGAACTAATTA+AGG + chr7_4:53130919-53130938 None:intergenic 25.0%
! TGATCTTGTTCTTATAGAAA+AGG + chr7_4:53131002-53131021 None:intergenic 25.0%
! AATGAAATGAATGACTTCAT+CGG - chr7_4:53131180-53131199 Msa1162430:intron 25.0%
!! ATTTTCTGATTGTGAAATAG+TGG + chr7_4:53131285-53131304 None:intergenic 25.0%
! ACAAAGTAGGTAATTGAAAA+AGG - chr7_4:53131328-53131347 Msa1162430:intron 25.0%
!!! AGAAAGTATTACCATAGTTA+CGG - chr7_4:53131684-53131703 Msa1162430:intron 25.0%
!!! GGGTTTGAATTTTTTGAATT+GGG + chr7_4:53131909-53131928 None:intergenic 25.0%
! GAAATTTGATCTTGTAGTTT+GGG - chr7_4:53131989-53132008 Msa1162430:intron 25.0%
! AAATTTGATCTTGTAGTTTG+GGG - chr7_4:53131990-53132009 Msa1162430:intron 25.0%
!!! TTTAGTACTTGGTTTTTACT+GGG + chr7_4:53132182-53132201 None:intergenic 25.0%
!!! CGTTTTTGTTTTATGAATTG+AGG + chr7_4:53132229-53132248 None:intergenic 25.0%
!! ATCGATTTCAATTTAAGCTA+TGG + chr7_4:53132260-53132279 None:intergenic 25.0%
! TAGAATCGAAAAGAAGAAAA+AGG - chr7_4:53132288-53132307 Msa1162430:intron 25.0%
! AACTAACTTAAAGAGATAGA+TGG + chr7_4:53132854-53132873 None:intergenic 25.0%
!! ATCTCTTTAAGTTAGTTACA+TGG - chr7_4:53132857-53132876 Msa1162430:intron 25.0%
! TTCACATTGATGAATTTCTA+AGG - chr7_4:53133091-53133110 Msa1162430:intron 25.0%
! TTAATTAGGATTGTATCAGT+GGG + chr7_4:53133171-53133190 None:intergenic 25.0%
! TTTAATTAGGATTGTATCAG+TGG + chr7_4:53133172-53133191 None:intergenic 25.0%
!!! AGGGATAGTATCTTTTAATT+AGG + chr7_4:53133185-53133204 None:intergenic 25.0%
! AATTCAAAAAGGATGTTATG+GGG + chr7_4:53133276-53133295 None:intergenic 25.0%
!! CTCATGTCTAATATGATTTT+TGG - chr7_4:53133329-53133348 Msa1162430:intron 25.0%
!! GCAAGATTTTTGAATCAAAT+TGG - chr7_4:53133373-53133392 Msa1162430:intron 25.0%
!!! ATCAAAATATCGACTGATTT+TGG - chr7_4:53133422-53133441 Msa1162430:CDS 25.0%
!!! TTGAATTAAGTTGAAAGCAA+TGG - chr7_4:53133461-53133480 Msa1162430:intron 25.0%
! AATTCTTGAAATGTTAACCT+AGG - chr7_4:53133755-53133774 Msa1162430:CDS 25.0%
! ATATAGACATTGATAGAAGT+CGG + chr7_4:53133837-53133856 None:intergenic 25.0%
! ATCAATGTCTATATTAGTAG+CGG - chr7_4:53133843-53133862 Msa1162430:intron 25.0%
! AAGCTAGAGGAATATTAATT+AGG - chr7_4:53133941-53133960 Msa1162430:CDS 25.0%
! CAAGAACAAATACTACAAAT+TGG + chr7_4:53134051-53134070 None:intergenic 25.0%
! TTTGTAGTATTTGTTCTTGT+TGG - chr7_4:53134052-53134071 Msa1162430:intron 25.0%
!! TAGGTTTTCTTAGTCAAATT+TGG + chr7_4:53134344-53134363 None:intergenic 25.0%
! TAGTTATAGGAACATGATAT+AGG + chr7_4:53134363-53134382 None:intergenic 25.0%
! TTAGTATGAACAGTATTATC+TGG + chr7_4:53134781-53134800 None:intergenic 25.0%
!! GATGATGAATTTGATGATGA+CGG + chr7_4:53125497-53125516 Msa1162440:CDS 30.0%
TGTCAGCAGAAATAAAGATT+CGG - chr7_4:53125741-53125760 Msa1162430:intron 30.0%
GTCCATTAAGATAGAGAAAA+AGG + chr7_4:53125798-53125817 Msa1162440:intron 30.0%
CACATGAAAATCGAAATGAA+AGG - chr7_4:53125868-53125887 Msa1162430:intron 30.0%
! AACCAAAAGTGTGGAAAAAT+TGG - chr7_4:53126085-53126104 Msa1162430:intron 30.0%
! TTCCAATTTTTCCACACTTT+TGG + chr7_4:53126090-53126109 Msa1162440:intron 30.0%
!! AAAGAGGGTCTATTTTTCAA+AGG + chr7_4:53126321-53126340 Msa1162440:intron 30.0%
AAAATTCAACATCAGGAATG+AGG - chr7_4:53126469-53126488 Msa1162430:intron 30.0%
CTATAGTATAGTAAACGCAT+AGG + chr7_4:53126950-53126969 Msa1162440:intron 30.0%
CAGAATCAAACTTAATCAGA+TGG - chr7_4:53127429-53127448 Msa1162430:intron 30.0%
GTAACCTAAAATGCAATAAC+CGG - chr7_4:53127509-53127528 Msa1162430:intron 30.0%
ACAATAAATCATGACATGTC+CGG + chr7_4:53127531-53127550 Msa1162440:intron 30.0%
TAATGGTATTCATAGAAGGA+AGG + chr7_4:53127612-53127631 Msa1162440:intron 30.0%
CTCTTAGTTCACATACTAAA+CGG + chr7_4:53127767-53127786 Msa1162440:intron 30.0%
AATGTTTGTGGACAAATTCT+TGG - chr7_4:53127824-53127843 Msa1162430:intron 30.0%
ACACTATTCTAAGTAACCAA+AGG - chr7_4:53127995-53128014 Msa1162430:intron 30.0%
ATAAACTTAGTATTGTCGGT+GGG - chr7_4:53128235-53128254 Msa1162430:intron 30.0%
!!! GCTCTTCTTTTTTATTTCTC+TGG + chr7_4:53128269-53128288 Msa1162440:intron 30.0%
CTACAATACAAAAGAGAGAT+GGG + chr7_4:53128529-53128548 Msa1162440:intron 30.0%
ACTACAATACAAAAGAGAGA+TGG + chr7_4:53128530-53128549 Msa1162440:intron 30.0%
! CATATTTTGTGAGTTAAGAG+AGG + chr7_4:53128573-53128592 Msa1162440:intron 30.0%
CTCTCTTAACTCACAAAATA+TGG - chr7_4:53128571-53128590 Msa1162430:intron 30.0%
ATACTATAAGAGGGAAAGTA+TGG + chr7_4:53128615-53128634 Msa1162440:CDS 30.0%
!! CAACAAATAATGGGCATATA+TGG - chr7_4:53128856-53128875 Msa1162430:intron 30.0%
CATGTCAAATAGTCAAAGTA+AGG + chr7_4:53129074-53129093 Msa1162440:intron 30.0%
TTAATCATGGACGTTGAATT+TGG - chr7_4:53129243-53129262 Msa1162430:intron 30.0%
! ACGATTTTAAATCGGGTAAA+GGG + chr7_4:53129436-53129455 Msa1162440:intron 30.0%
! AACGATTTTAAATCGGGTAA+AGG + chr7_4:53129437-53129456 Msa1162440:intron 30.0%
ATCTTGTATAGGGATAGTTT+AGG + chr7_4:53129812-53129831 Msa1162440:intron 30.0%
AACTATCCCTATACAAGATT+TGG - chr7_4:53129813-53129832 Msa1162430:intron 30.0%
ACTATCCCTATACAAGATTT+GGG - chr7_4:53129814-53129833 Msa1162430:intron 30.0%
TGAATGTATTTGGCTAAGAA+TGG + chr7_4:53129896-53129915 Msa1162440:CDS 30.0%
ACTAGTAAATCACCATAGTA+TGG - chr7_4:53130000-53130019 Msa1162430:intron 30.0%
!!! TGTTGTTTTTGTGTCAATCA+GGG + chr7_4:53130079-53130098 Msa1162440:CDS 30.0%
TGATTGACACAAAAACAACA+CGG - chr7_4:53130079-53130098 Msa1162430:intron 30.0%
! AATGGAGAGTATATTGCTTT+AGG + chr7_4:53130232-53130251 Msa1162440:intron 30.0%
!!! CTTTTCTCTCTTGTTTCTAT+TGG + chr7_4:53130257-53130276 Msa1162440:intron 30.0%
GAGAGAAAAGTTAGTAAGAA+AGG - chr7_4:53130267-53130286 Msa1162430:intron 30.0%
!!! AGAGTTTTGATTCTCATAAC+TGG + chr7_4:53130305-53130324 Msa1162440:intron 30.0%
GAGAATCAAAACTCTTGTTA+CGG - chr7_4:53130310-53130329 Msa1162430:intron 30.0%
! CAATGGTAATGATATTTCTG+TGG + chr7_4:53130456-53130475 Msa1162440:CDS 30.0%
CACAGAAATATCATTACCAT+TGG - chr7_4:53130454-53130473 Msa1162430:intron 30.0%
!! TGAAGATGAGGAATTTGTTT+TGG + chr7_4:53130503-53130522 Msa1162440:CDS 30.0%
!! TTGTTTGATTTGGCTTATGT+AGG + chr7_4:53130733-53130752 Msa1162440:three_prime_UTR 30.0%
TTGCAATAATTGAACTACTG+TGG - chr7_4:53130793-53130812 Msa1162430:intron 30.0%
! AAGAGAGCATAAAGAGTAAA+TGG + chr7_4:53131234-53131253 None:intergenic 30.0%
GAGTATGTAGTTAACAAAGT+AGG - chr7_4:53131315-53131334 Msa1162430:intron 30.0%
TATTGTTCCGATTATTGTTG+GGG + chr7_4:53131381-53131400 None:intergenic 30.0%
GTATTGTTCCGATTATTGTT+GGG + chr7_4:53131382-53131401 None:intergenic 30.0%
ACACTATACTACAGTGTTAA+AGG - chr7_4:53131496-53131515 Msa1162430:CDS 30.0%
! TACAAAGTCTTGTCAAATAG+TGG + chr7_4:53131601-53131620 None:intergenic 30.0%
! CAATTTTGCTTTCAGAATTC+AGG + chr7_4:53131624-53131643 None:intergenic 30.0%
!! GAAAGTATTACCATAGTTAC+GGG - chr7_4:53131685-53131704 Msa1162430:intron 30.0%
AAATAGTCTTCTTCCTTCAT+TGG + chr7_4:53131803-53131822 None:intergenic 30.0%
GAAGAAGACTATTTAACCAT+TGG - chr7_4:53131809-53131828 Msa1162430:intron 30.0%
TTTGAATTGGGCTTTCAAAT+GGG + chr7_4:53131897-53131916 None:intergenic 30.0%
! TTTTGAATTGGGCTTTCAAA+TGG + chr7_4:53131898-53131917 None:intergenic 30.0%
!!! GGGGTTTGAATTTTTTGAAT+TGG + chr7_4:53131910-53131929 None:intergenic 30.0%
CGAAATTTGATCTTGTAGTT+TGG - chr7_4:53131988-53132007 Msa1162430:intron 30.0%
AATTTGATCTTGTAGTTTGG+GGG - chr7_4:53131991-53132010 Msa1162430:intron 30.0%
TTGTAGATCTAAACCCAAAA+CGG - chr7_4:53132041-53132060 Msa1162430:intron 30.0%
!! GTTTAGTACTTGGTTTTTAC+TGG + chr7_4:53132183-53132202 None:intergenic 30.0%
TAAAAAGATGAAAAGTGGGA+AGG + chr7_4:53132610-53132629 None:intergenic 30.0%
TTTGTACTAGTGCTATATCA+TGG - chr7_4:53132679-53132698 Msa1162430:CDS 30.0%
!!! ATCATGGTTGATTAGTTTTG+TGG - chr7_4:53132695-53132714 Msa1162430:CDS 30.0%
ATGAAAACTTTGTCAAGTCA+TGG + chr7_4:53132735-53132754 None:intergenic 30.0%
!! AGTTTTCATAACTGATTTCG+TGG - chr7_4:53132746-53132765 Msa1162430:intron 30.0%
!! GTTTTCATAACTGATTTCGT+GGG - chr7_4:53132747-53132766 Msa1162430:intron 30.0%
!! TTTTCATAACTGATTTCGTG+GGG - chr7_4:53132748-53132767 Msa1162430:intron 30.0%
AACTTAAAGAGATAGATGGA+TGG + chr7_4:53132850-53132869 None:intergenic 30.0%
!! ATAGCAAAGGTACCATAATA+AGG - chr7_4:53133018-53133037 Msa1162430:intron 30.0%
ATAGCTAGGAAACCTTATTA+TGG + chr7_4:53133033-53133052 None:intergenic 30.0%
AATAAGGTTTCCTAGCTATA+AGG - chr7_4:53133034-53133053 Msa1162430:intron 30.0%
CACGTGAAAGTTAATATTAG+TGG - chr7_4:53133144-53133163 Msa1162430:intron 30.0%
TAACACATATGATATTGGTG+AGG + chr7_4:53133781-53133800 None:intergenic 30.0%
ATCTATTGTAAGTAACCGAT+CGG - chr7_4:53133903-53133922 Msa1162430:CDS 30.0%
!! GATTTTTCAAAGTACGTAAG+GGG + chr7_4:53134247-53134266 None:intergenic 30.0%
!! CGATTTTTCAAAGTACGTAA+GGG + chr7_4:53134248-53134267 None:intergenic 30.0%
!! ACGATTTTTCAAAGTACGTA+AGG + chr7_4:53134249-53134268 None:intergenic 30.0%
AGCACTTCAACAAACATATA+AGG + chr7_4:53134287-53134306 None:intergenic 30.0%
!!! TCTTGTTTTCAAAGGTAGAA+AGG - chr7_4:53134391-53134410 Msa1162430:intron 30.0%
!! CTTGTTTTCAAAGGTAGAAA+GGG - chr7_4:53134392-53134411 Msa1162430:intron 30.0%
ACAATGTATATGTTTGTGTG+TGG + chr7_4:53134533-53134552 None:intergenic 30.0%
ATTATGTGTACTTATCCTCT+AGG - chr7_4:53134584-53134603 Msa1162430:CDS 30.0%
TTATGTGTACTTATCCTCTA+GGG - chr7_4:53134585-53134604 Msa1162430:CDS 30.0%
! TGAGTCAACTCTATATTTTG+CGG + chr7_4:53134715-53134734 None:intergenic 30.0%
GTGATTTGAATTGAACTTAC+AGG - chr7_4:53134837-53134856 Msa1162430:CDS 30.0%
!!! TTGGTTTGGTTTTTCAACAC+TGG + chr7_4:53125436-53125455 None:intergenic 35.0%
! ATTGGATGATGATGATGTTG+TGG + chr7_4:53125531-53125550 Msa1162440:CDS 35.0%
GTCAGCAGAAATAAAGATTC+GGG - chr7_4:53125742-53125761 Msa1162430:intron 35.0%
! AGCTTATGATTTGGGTGAAT+TGG - chr7_4:53125765-53125784 Msa1162430:intron 35.0%
! GCCCTTTTTCTCTATCTTAA+TGG - chr7_4:53125793-53125812 Msa1162430:intron 35.0%
AACGTTATTGGGATTTGGAA+GGG + chr7_4:53125912-53125931 Msa1162440:intron 35.0%
AAACGTTATTGGGATTTGGA+AGG + chr7_4:53125913-53125932 Msa1162440:intron 35.0%
AGCAAAACGTTATTGGGATT+TGG + chr7_4:53125917-53125936 Msa1162440:intron 35.0%
! GACTCTTTTCCTTTCACTTT+TGG - chr7_4:53125954-53125973 Msa1162430:intron 35.0%
!! TGTTTTGCTTTTCTGCAGAA+AGG + chr7_4:53126065-53126084 Msa1162440:intron 35.0%
AGCAAAACAAACCAAAAGTG+TGG - chr7_4:53126076-53126095 Msa1162430:intron 35.0%
TCCACAGAAAATTCAACATC+AGG - chr7_4:53126462-53126481 Msa1162430:intron 35.0%
! TCCTGATGTTGAATTTTCTG+TGG + chr7_4:53126466-53126485 Msa1162440:intron 35.0%
GAAGGAAAAATGTTGAGAGT+TGG + chr7_4:53126498-53126517 Msa1162440:intron 35.0%
GCATAGGTAGGTGATTAATT+AGG + chr7_4:53126934-53126953 Msa1162440:intron 35.0%
AGTATAGTAAACGCATAGGT+AGG + chr7_4:53126946-53126965 Msa1162440:intron 35.0%
! TCATGTTCTGAACTTGAAGT+TGG + chr7_4:53127000-53127019 Msa1162440:intron 35.0%
! ACTTCAAGTTCAGAACATGA+AGG - chr7_4:53127000-53127019 Msa1162430:intron 35.0%
AAAGAGTTAACCTTAGGATC+TGG + chr7_4:53127036-53127055 Msa1162440:intron 35.0%
AAAAAGCAGGCTTAGGAAAA+AGG - chr7_4:53127261-53127280 Msa1162430:intron 35.0%
AGGCTTAGGAAAAAGGTAAA+TGG - chr7_4:53127268-53127287 Msa1162430:intron 35.0%
CAAACTTAATCAGATGGAAC+AGG - chr7_4:53127435-53127454 Msa1162430:intron 35.0%
! ATGTCCGGTTATTGCATTTT+AGG + chr7_4:53127516-53127535 Msa1162440:intron 35.0%
!!! CTATTTTAGGGCATGTTCTT+TGG - chr7_4:53127556-53127575 Msa1162430:intron 35.0%
GAGCTAATGGTATTCATAGA+AGG + chr7_4:53127616-53127635 Msa1162440:intron 35.0%
TCTATGAATACCATTAGCTC+AGG - chr7_4:53127616-53127635 Msa1162430:intron 35.0%
TTAGTTCACATACTAAACGG+TGG + chr7_4:53127764-53127783 Msa1162440:intron 35.0%
AACATTCTAAGCTCATTCTC+AGG + chr7_4:53127810-53127829 Msa1162440:intron 35.0%
GAATGAGCTTAGAATGTTTG+TGG - chr7_4:53127812-53127831 Msa1162430:intron 35.0%
ACATGAAGCAACGTTCAATT+GGG + chr7_4:53127932-53127951 Msa1162440:intron 35.0%
TAAGCCTTCTGAACTCATTA+AGG - chr7_4:53127965-53127984 Msa1162430:intron 35.0%
GCATGAATGAAATGAACCTT+TGG + chr7_4:53128014-53128033 Msa1162440:CDS 35.0%
CATAAACTTAGTATTGTCGG+TGG - chr7_4:53128234-53128253 Msa1162430:intron 35.0%
TAAACTTAGTATTGTCGGTG+GGG - chr7_4:53128236-53128255 Msa1162430:intron 35.0%
TCTAACTCTACCGTACAATA+TGG + chr7_4:53128345-53128364 Msa1162440:intron 35.0%
ATACAAAAGAGAGATGGGTA+TGG + chr7_4:53128524-53128543 Msa1162440:intron 35.0%
! ATTATTTGTTGCTCGGTCAA+TGG + chr7_4:53128847-53128866 Msa1162440:intron 35.0%
ATTGACCGAGCAACAAATAA+TGG - chr7_4:53128846-53128865 Msa1162430:intron 35.0%
TTGACCGAGCAACAAATAAT+GGG - chr7_4:53128847-53128866 Msa1162430:intron 35.0%
! TATGCCCATTATTTGTTGCT+CGG + chr7_4:53128854-53128873 Msa1162440:intron 35.0%
ATTGCAACAATCTACACAAC+AGG - chr7_4:53128879-53128898 Msa1162430:intron 35.0%
TTGCAACAATCTACACAACA+GGG - chr7_4:53128880-53128899 Msa1162430:intron 35.0%
TCCATGTAGTTGGTCATATT+GGG + chr7_4:53128988-53129007 Msa1162440:CDS 35.0%
TAAATCGGCCACCTATAAAT+CGG + chr7_4:53129386-53129405 Msa1162440:intron 35.0%
! GATTTTAAATCGGGTAAAGG+GGG + chr7_4:53129434-53129453 Msa1162440:intron 35.0%
! CGATTTTAAATCGGGTAAAG+GGG + chr7_4:53129435-53129454 Msa1162440:intron 35.0%
CGGATGAACCCATTTAAAAA+AGG - chr7_4:53129501-53129520 Msa1162430:intron 35.0%
AAGCATAGTTACTGACATAG+AGG - chr7_4:53129769-53129788 Msa1162430:intron 35.0%
CTATCCCTATACAAGATTTG+GGG - chr7_4:53129815-53129834 Msa1162430:intron 35.0%
TCTTCCCCAAATCTTGTATA+GGG + chr7_4:53129822-53129841 Msa1162440:intron 35.0%
TTCTTCCCCAAATCTTGTAT+AGG + chr7_4:53129823-53129842 Msa1162440:intron 35.0%
ATACAAGATTTGGGGAAGAA+AGG - chr7_4:53129823-53129842 Msa1162430:intron 35.0%
TGTACAGAAGACAAACCAAT+TGG - chr7_4:53129935-53129954 Msa1162430:intron 35.0%
AGTAAATCACCATAGTATGG+AGG - chr7_4:53130003-53130022 Msa1162430:intron 35.0%
!!! GTTGTTTTTGTGTCAATCAG+GGG + chr7_4:53130078-53130097 Msa1162440:CDS 35.0%
!!! GTGTTGTTTTTGTGTCAATC+AGG + chr7_4:53130080-53130099 Msa1162440:CDS 35.0%
GCTTATGTAAAACATGCTCT+CGG + chr7_4:53130160-53130179 Msa1162440:intron 35.0%
! GAGAGTATATTGCTTTAGGT+GGG + chr7_4:53130228-53130247 Msa1162440:intron 35.0%
!! CTCTTGTTTCTATTGGAGAA+TGG + chr7_4:53130250-53130269 Msa1162440:intron 35.0%
!!! TGTTTTCAGGTTGTTCCAAA+GGG + chr7_4:53130360-53130379 Msa1162440:CDS 35.0%
!!! ATGTTTTCAGGTTGTTCCAA+AGG + chr7_4:53130361-53130380 Msa1162440:CDS 35.0%
! ATTTGGCTTATGTAGGCATA+TGG + chr7_4:53130726-53130745 Msa1162440:three_prime_UTR 35.0%
AGTAAAAGATACCTTCAACC+AGG - chr7_4:53130817-53130836 Msa1162430:intron 35.0%
GGAAAAAAGTAATGCAGACT+TGG + chr7_4:53131106-53131125 None:intergenic 35.0%
ACTTGCGGAAATAAGAAAAG+TGG - chr7_4:53131205-53131224 Msa1162430:intron 35.0%
ATTGTTCCGATTATTGTTGG+GGG + chr7_4:53131380-53131399 None:intergenic 35.0%
GGTATTGTTCCGATTATTGT+TGG + chr7_4:53131383-53131402 None:intergenic 35.0%
AACAATACCGTTGTCAAGAA+TGG - chr7_4:53131394-53131413 Msa1162430:CDS 35.0%
ACAAGATCCATTCTTGACAA+CGG + chr7_4:53131404-53131423 None:intergenic 35.0%
ATACTAAACAAACTACGACC+TGG + chr7_4:53131712-53131731 None:intergenic 35.0%
!! GTCGTAGTTTGTTTAGTATC+TGG - chr7_4:53131713-53131732 Msa1162430:intron 35.0%
! AGCTAAACATCGATCAGTTT+TGG + chr7_4:53131836-53131855 None:intergenic 35.0%
CAAACCCTAACAAAAGAATC+CGG - chr7_4:53131949-53131968 Msa1162430:intron 35.0%
CAAGATCAAATTTCGTAGCT+AGG + chr7_4:53131983-53132002 None:intergenic 35.0%
!!! TATGATATGCATGCCGTTTT+GGG + chr7_4:53132057-53132076 None:intergenic 35.0%
TTCTTCAGTGGTTTAGTACT+TGG + chr7_4:53132193-53132212 None:intergenic 35.0%
AAACCCATTCACAATGTTCT+TGG + chr7_4:53132337-53132356 None:intergenic 35.0%
!! AACAAGGTTTTCAGGCTTTT+CGG + chr7_4:53132373-53132392 None:intergenic 35.0%
TGAGTTAAGGACTTGAGAAA+AGG - chr7_4:53132496-53132515 Msa1162430:CDS 35.0%
! TTTCATAACTGATTTCGTGG+GGG - chr7_4:53132749-53132768 Msa1162430:intron 35.0%
AAGAAGAATCTGTTGTCCTT+GGG - chr7_4:53132786-53132805 Msa1162430:intron 35.0%
TAAAGAGATAGATGGATGGA+AGG + chr7_4:53132846-53132865 None:intergenic 35.0%
GAGAGTTAGTTAGTACACAT+AGG - chr7_4:53132985-53133004 Msa1162430:CDS 35.0%
TTCCTAGCTATAAGGTTATG+AGG - chr7_4:53133042-53133061 Msa1162430:intron 35.0%
ATCCTCATAACCTTATAGCT+AGG + chr7_4:53133047-53133066 None:intergenic 35.0%
CATGACATCACATAGATATG+GGG + chr7_4:53133212-53133231 None:intergenic 35.0%
CCATGACATCACATAGATAT+GGG + chr7_4:53133213-53133232 None:intergenic 35.0%
ACCATGACATCACATAGATA+TGG + chr7_4:53133214-53133233 None:intergenic 35.0%
AAAAAGGATGTTATGGGGAA+GGG + chr7_4:53133271-53133290 None:intergenic 35.0%
CAAATTGGTCAAACTATGAC+TGG + chr7_4:53134036-53134055 None:intergenic 35.0%
! TGGAACGTTAACCGAAATTT+TGG + chr7_4:53134324-53134343 None:intergenic 35.0%
CAGTTGAATCTACAAGCAAA+AGG - chr7_4:53134488-53134507 Msa1162430:intron 35.0%
TTGAATCTACAAGCAAAAGG+TGG - chr7_4:53134491-53134510 Msa1162430:intron 35.0%
ATGTATATGTTTGTGTGTGG+AGG + chr7_4:53134530-53134549 None:intergenic 35.0%
!! ACCACAATTTGACTTGATCA+GGG + chr7_4:53134618-53134637 None:intergenic 35.0%
!! AACCACAATTTGACTTGATC+AGG + chr7_4:53134619-53134638 None:intergenic 35.0%
TGATCAAGTCAAATTGTGGT+TGG - chr7_4:53134618-53134637 Msa1162430:CDS 35.0%
TTATCGATCACTGTAGTGAT+AGG - chr7_4:53134660-53134679 Msa1162430:CDS 35.0%
!! AGTTGAGTAGTGGTTTGGTT+TGG + chr7_4:53125450-53125469 None:intergenic 40.0%
! GTTCTAGTTGAGTAGTGGTT+TGG + chr7_4:53125455-53125474 None:intergenic 40.0%
!! ATTTGATGATGACGGTGTTG+AGG + chr7_4:53125489-53125508 Msa1162440:CDS 40.0%
ATGTAGTTTCCAAGGACAGA+GGG + chr7_4:53125603-53125622 Msa1162440:intron 40.0%
GAACTCACATGTAGTTTCCA+AGG + chr7_4:53125611-53125630 Msa1162440:intron 40.0%
AGATTCGGGAGCTTATGATT+TGG - chr7_4:53125756-53125775 Msa1162430:intron 40.0%
GATTCGGGAGCTTATGATTT+GGG - chr7_4:53125757-53125776 Msa1162430:intron 40.0%
!! TTTGGTCTTGAACACTGGAT+GGG + chr7_4:53125828-53125847 Msa1162440:intron 40.0%
!!! TTTTGGTCTTGAACACTGGA+TGG + chr7_4:53125829-53125848 Msa1162440:intron 40.0%
!!! ACGTTTTTGGTCTTGAACAC+TGG + chr7_4:53125833-53125852 Msa1162440:intron 40.0%
GATTCTGCTGAACATGCTAT+CGG + chr7_4:53126009-53126028 Msa1162440:intron 40.0%
GGAAAAATGTTGAGAGTTGG+TGG + chr7_4:53126495-53126514 Msa1162440:intron 40.0%
ACCTTAGAATTGGACGATGA+TGG + chr7_4:53126540-53126559 Msa1162440:intron 40.0%
TTAGTTTCTCCGCAAACAAG+TGG - chr7_4:53126670-53126689 Msa1162430:intron 40.0%
TAGCAGCGAGAGAAAAATCA+TGG - chr7_4:53126967-53126986 Msa1162430:intron 40.0%
CGAGAGAAAAATCATGGCAA+GGG - chr7_4:53126973-53126992 Msa1162430:intron 40.0%
ACCTAAAACACCAGATCCTA+AGG - chr7_4:53127023-53127042 Msa1162430:intron 40.0%
! ACCTTAGGATCTGGTGTTTT+AGG + chr7_4:53127027-53127046 Msa1162440:intron 40.0%
!!! TTTCCTAAGCCTGCTTTTTC+TGG + chr7_4:53127260-53127279 Msa1162440:intron 40.0%
!!! TTTTAGGGCATGTTCTTTGG+TGG - chr7_4:53127559-53127578 Msa1162430:intron 40.0%
CAATGTTCGACGTGGAATAT+GGG - chr7_4:53127721-53127740 Msa1162430:intron 40.0%
!! TTCATCTTGTTTCTGGCATG+TGG - chr7_4:53127901-53127920 Msa1162430:intron 40.0%
!! TCATCTTGTTTCTGGCATGT+GGG - chr7_4:53127902-53127921 Msa1162430:intron 40.0%
CATGAAGCAACGTTCAATTG+GGG + chr7_4:53127931-53127950 Msa1162440:intron 40.0%
CACATGAAGCAACGTTCAAT+TGG + chr7_4:53127933-53127952 Msa1162440:intron 40.0%
CAATTGAACGTTGCTTCATG+TGG - chr7_4:53127931-53127950 Msa1162430:intron 40.0%
CCTACCTTAATGAGTTCAGA+AGG + chr7_4:53127972-53127991 Msa1162440:CDS 40.0%
CCTTCTGAACTCATTAAGGT+AGG - chr7_4:53127969-53127988 Msa1162430:intron 40.0%
! TTTTTATGCGGAGAATAGGG+AGG - chr7_4:53128156-53128175 Msa1162430:intron 40.0%
! TTTTATGCGGAGAATAGGGA+GGG - chr7_4:53128157-53128176 Msa1162430:intron 40.0%
ATGTAGTTGGTCATATTGGG+AGG + chr7_4:53128985-53129004 Msa1162440:intron 40.0%
TCCCAATATGACCAACTACA+TGG - chr7_4:53128984-53129003 Msa1162430:intron 40.0%
GTCCATGTAGTTGGTCATAT+TGG + chr7_4:53128989-53129008 Msa1162440:CDS 40.0%
! AAGAGTGGAGAGTTTGTTCA+TGG + chr7_4:53129025-53129044 Msa1162440:CDS 40.0%
TCTCACGAAACTTTCAAGAG+TGG + chr7_4:53129040-53129059 Msa1162440:CDS 40.0%
TCTTGAAAGTTTCGTGAGAG+AGG - chr7_4:53129041-53129060 Msa1162430:intron 40.0%
GTGAACATCCGATTTATAGG+TGG - chr7_4:53129375-53129394 Msa1162430:intron 40.0%
! TAGGTGGCCGATTTAAAAAG+TGG - chr7_4:53129391-53129410 Msa1162430:intron 40.0%
AAGATTTGGGGAAGAAAGGA+AGG - chr7_4:53129827-53129846 Msa1162430:intron 40.0%
TATTTGGCTAAGAATGGCCA+AGG + chr7_4:53129890-53129909 Msa1162440:CDS 40.0%
! AATACACGATCTGAAGCTAG+AGG + chr7_4:53129962-53129981 Msa1162440:intron 40.0%
CAATCGAGAACATTGTTGGT+AGG + chr7_4:53130047-53130066 Msa1162440:intron 40.0%
CTACCAACAATGTTCTCGAT+TGG - chr7_4:53130045-53130064 Msa1162430:intron 40.0%
CTTCCAATCGAGAACATTGT+TGG + chr7_4:53130051-53130070 Msa1162440:intron 40.0%
ACAATGTTCTCGATTGGAAG+CGG - chr7_4:53130051-53130070 Msa1162430:intron 40.0%
AAACAACACGGATGTTAGTC+AGG - chr7_4:53130091-53130110 Msa1162430:intron 40.0%
GGAGAACAGCATCAACAAAT+AGG - chr7_4:53130189-53130208 Msa1162430:intron 40.0%
! TTTAGGTGGGTGATACGTTT+TGG + chr7_4:53130215-53130234 Msa1162440:intron 40.0%
! GGAGAGTATATTGCTTTAGG+TGG + chr7_4:53130229-53130248 Msa1162440:intron 40.0%
AATGGGAAACTTCTGGTGAA+TGG + chr7_4:53130532-53130551 Msa1162440:CDS 40.0%
!!! ATTGTTTTGGGTTTTGTCGC+AGG + chr7_4:53130560-53130579 Msa1162440:CDS 40.0%
AAAAGGGTTGTAGCTAAAGC+TGG + chr7_4:53130678-53130697 Msa1162440:three_prime_UTR 40.0%
AAAGATACCTTCAACCAGGA+TGG - chr7_4:53130821-53130840 Msa1162430:intron 40.0%
AAGATCACCATAGATGCAGA+AGG - chr7_4:53131015-53131034 Msa1162430:intron 40.0%
! AAGTAATGCAGACTTGGTTC+TGG + chr7_4:53131100-53131119 None:intergenic 40.0%
ATGACTTCATCGGTAACTTG+CGG - chr7_4:53131190-53131209 Msa1162430:intron 40.0%
GCACTGGACTGTATTTAAGA+TGG + chr7_4:53131358-53131377 None:intergenic 40.0%
CAATTTGCGGTTGACAACAT+TGG + chr7_4:53131535-53131554 None:intergenic 40.0%
ATGTTGTCAACCGCAAATTG+CGG - chr7_4:53131535-53131554 Msa1162430:CDS 40.0%
AATGACAAACCCGCAATTTG+CGG + chr7_4:53131548-53131567 None:intergenic 40.0%
GTCTCAACAAATGTCTCAGA+TGG + chr7_4:53131778-53131797 None:intergenic 40.0%
TTTGTTGAGACGTCCAATGA+AGG - chr7_4:53131787-53131806 Msa1162430:intron 40.0%
!! ATCGATCAGTTTTGGTCCAA+TGG + chr7_4:53131828-53131847 None:intergenic 40.0%
TGGATTGAGATCTGCTTGTT+GGG + chr7_4:53131931-53131950 None:intergenic 40.0%
TTGGATTGAGATCTGCTTGT+TGG + chr7_4:53131932-53131951 None:intergenic 40.0%
! CGGATTCTTTTGTTAGGGTT+TGG + chr7_4:53131951-53131970 None:intergenic 40.0%
! TCTGCCGGATTCTTTTGTTA+GGG + chr7_4:53131956-53131975 None:intergenic 40.0%
! TTCTGCCGGATTCTTTTGTT+AGG + chr7_4:53131957-53131976 None:intergenic 40.0%
AAACGACATAACAGGTGAAC+AGG - chr7_4:53132015-53132034 Msa1162430:intron 40.0%
AACGACATAACAGGTGAACA+GGG - chr7_4:53132016-53132035 Msa1162430:intron 40.0%
!! GTATGATATGCATGCCGTTT+TGG + chr7_4:53132058-53132077 None:intergenic 40.0%
!! GTCTAGGGTTTTAGTGGTTT+AGG + chr7_4:53132160-53132179 None:intergenic 40.0%
!! CTTGGTTTTTACTGGGTCTA+GGG + chr7_4:53132175-53132194 None:intergenic 40.0%
!! ACTTGGTTTTTACTGGGTCT+AGG + chr7_4:53132176-53132195 None:intergenic 40.0%
ATTCACAATGTTCTTGGTGG+TGG + chr7_4:53132331-53132350 None:intergenic 40.0%
ACCACCAAGAACATTGTGAA+TGG - chr7_4:53132330-53132349 Msa1162430:intron 40.0%
CCACCAAGAACATTGTGAAT+GGG - chr7_4:53132331-53132350 Msa1162430:intron 40.0%
! TCCTCAAGAACAAGGTTTTC+AGG + chr7_4:53132381-53132400 None:intergenic 40.0%
ACCTTGTTCTTGAGGAAAGT+AGG - chr7_4:53132385-53132404 Msa1162430:intron 40.0%
CCTTGTTCTTGAGGAAAGTA+GGG - chr7_4:53132386-53132405 Msa1162430:intron 40.0%
CTTGTTCTTGAGGAAAGTAG+GGG - chr7_4:53132387-53132406 Msa1162430:intron 40.0%
TAGGGGATGGAAAAAGATGA+AGG - chr7_4:53132404-53132423 Msa1162430:intron 40.0%
!! TTGGGAGCTTTTTAGAGAGA+AGG - chr7_4:53132430-53132449 Msa1162430:intron 40.0%
CTTAACTCAACTCTGTAGAC+AGG + chr7_4:53132485-53132504 None:intergenic 40.0%
CTGTCTACAGAGTTGAGTTA+AGG - chr7_4:53132483-53132502 Msa1162430:CDS 40.0%
!! AGTTTTGTGGTCCCTCTATA+AGG - chr7_4:53132708-53132727 Msa1162430:intron 40.0%
! GTTTTGTGGTCCCTCTATAA+GGG - chr7_4:53132709-53132728 Msa1162430:intron 40.0%
GAAGAAGAATCTGTTGTCCT+TGG - chr7_4:53132785-53132804 Msa1162430:intron 40.0%
! AGGCGTAAAAAGCATAGCAA+AGG - chr7_4:53133005-53133024 Msa1162430:CDS 40.0%
CCCATATCTATGTGATGTCA+TGG - chr7_4:53133210-53133229 Msa1162430:intron 40.0%
AGTGCTGTCTTCAAGTCAAA+CGG + chr7_4:53133242-53133261 None:intergenic 40.0%
CAAAAAGGATGTTATGGGGA+AGG + chr7_4:53133272-53133291 None:intergenic 40.0%
TCACACTATATTGTGGTAGC+TGG + chr7_4:53133569-53133588 None:intergenic 40.0%
ATATGATATTGGTGAGGCCT+AGG + chr7_4:53133775-53133794 None:intergenic 40.0%
! AGAAGTCGGTGAACAACTTT+TGG + chr7_4:53133823-53133842 None:intergenic 40.0%
TAAGTAACCGATCGGAACAA+TGG - chr7_4:53133911-53133930 Msa1162430:CDS 40.0%
AAGTAACCGATCGGAACAAT+GGG - chr7_4:53133912-53133931 Msa1162430:CDS 40.0%
TTGTTTCCCATTGTTCCGAT+CGG + chr7_4:53133921-53133940 None:intergenic 40.0%
CAATGGGAAACAAAAGCTAG+AGG - chr7_4:53133928-53133947 Msa1162430:CDS 40.0%
TTGGAGACGAAACTGTAACA+AGG + chr7_4:53134427-53134446 None:intergenic 40.0%
AGACACAGACAAAAAGAGGT+TGG + chr7_4:53134446-53134465 None:intergenic 40.0%
GCAAAGACACAGACAAAAAG+AGG + chr7_4:53134450-53134469 None:intergenic 40.0%
!! CAATTTGACTTGATCAGGGA+TGG + chr7_4:53134614-53134633 None:intergenic 40.0%
TCCCTGATCAAGTCAAATTG+TGG - chr7_4:53134614-53134633 Msa1162430:CDS 40.0%
GATTCAGACGATGAATGGTT+TGG + chr7_4:53134879-53134898 None:intergenic 40.0%
GATCTGATTCAGACGATGAA+TGG + chr7_4:53134884-53134903 None:intergenic 40.0%
!! GAGTGGTTCTAGTTGAGTAG+TGG + chr7_4:53125460-53125479 None:intergenic 45.0%
CATGTAGTTTCCAAGGACAG+AGG + chr7_4:53125604-53125623 Msa1162440:intron 45.0%
AGCAGAATCATATCTGCAGC+AGG - chr7_4:53126020-53126039 Msa1162430:intron 45.0%
GCAGAATCATATCTGCAGCA+GGG - chr7_4:53126021-53126040 Msa1162430:intron 45.0%
TGCAGAAAGGATCTGGTCAA+AGG + chr7_4:53126052-53126071 Msa1162440:intron 45.0%
! GCTTTTCTGCAGAAAGGATC+TGG + chr7_4:53126059-53126078 Msa1162440:intron 45.0%
TCTACATGCATAGGCTGAGA+AGG + chr7_4:53126516-53126535 Msa1162440:intron 45.0%
! GATGATGGCTCTACATGCAT+AGG + chr7_4:53126525-53126544 Msa1162440:intron 45.0%
GCCATCATCGTCCAATTCTA+AGG - chr7_4:53126536-53126555 Msa1162430:intron 45.0%
CTCTTGGATCCACTTGTTTG+CGG + chr7_4:53126682-53126701 Msa1162440:intron 45.0%
CAAACAAGTGGATCCAAGAG+AGG - chr7_4:53126682-53126701 Msa1162430:intron 45.0%
GTACGTGCCTTAACAGCTTT+GGG + chr7_4:53126718-53126737 Msa1162440:intron 45.0%
TGTACGTGCCTTAACAGCTT+TGG + chr7_4:53126719-53126738 Msa1162440:intron 45.0%
GCGAGAGAAAAATCATGGCA+AGG - chr7_4:53126972-53126991 Msa1162430:intron 45.0%
! TTTGGTGGAGGTGCAATGTT+GGG - chr7_4:53127574-53127593 Msa1162430:intron 45.0%
AGAGATCACACCTGAGCTAA+TGG + chr7_4:53127629-53127648 Msa1162440:intron 45.0%
GCAATGTTCGACGTGGAATA+TGG - chr7_4:53127720-53127739 Msa1162430:intron 45.0%
GAACGTTGCTTCATGTGGAT+TGG - chr7_4:53127936-53127955 Msa1162430:intron 45.0%
ATCTACACAACAGGGAGAAG+AGG - chr7_4:53128888-53128907 Msa1162430:intron 45.0%
GACCAACTACATGGACCAAA+TGG - chr7_4:53128993-53129012 Msa1162430:intron 45.0%
! TGCCATTTGGTCCATGTAGT+TGG + chr7_4:53128998-53129017 Msa1162440:CDS 45.0%
ACTACATGGACCAAATGGCA+AGG - chr7_4:53128998-53129017 Msa1162430:intron 45.0%
CTACATGGACCAAATGGCAA+GGG - chr7_4:53128999-53129018 Msa1162430:intron 45.0%
CGGGTGAACATCCGATTTAT+AGG - chr7_4:53129372-53129391 Msa1162430:intron 45.0%
ATTTGGGGAAGAAAGGAAGG+AGG - chr7_4:53129830-53129849 Msa1162430:intron 45.0%
TTGCCATGCACTCTTCTCAT+TGG + chr7_4:53129865-53129884 Msa1162440:intron 45.0%
! TCTGAAGCTAGAGGTCCAAT+TGG + chr7_4:53129953-53129972 Msa1162440:intron 45.0%
AAGGGACATGTCTTTGTGGT+GGG + chr7_4:53130342-53130361 Msa1162440:intron 45.0%
AAAGGGACATGTCTTTGTGG+TGG + chr7_4:53130343-53130362 Msa1162440:intron 45.0%
ACCACAAAGACATGTCCCTT+TGG - chr7_4:53130342-53130361 Msa1162430:intron 45.0%
TCCAAAGGGACATGTCTTTG+TGG + chr7_4:53130346-53130365 Msa1162440:intron 45.0%
! TGCTTATGAGTTGGCTCCAA+TGG + chr7_4:53130473-53130492 Msa1162440:CDS 45.0%
!! GAATGGTGTTGCTGAAGATG+AGG + chr7_4:53130515-53130534 Msa1162440:CDS 45.0%
! TTTTGTCGCAGGTTCGCAAT+GGG + chr7_4:53130549-53130568 Msa1162440:CDS 45.0%
! TGATCTTCAAAGCACCATCC+TGG + chr7_4:53130838-53130857 None:intergenic 45.0%
CTCGATTCCTTCTGCATCTA+TGG + chr7_4:53131025-53131044 None:intergenic 45.0%
TGTTGTCAACCGCAAATTGC+GGG - chr7_4:53131536-53131555 Msa1162430:CDS 45.0%
ATTACCATAGTTACGGGACC+AGG - chr7_4:53131691-53131710 Msa1162430:intron 45.0%
! TTAAGAGCATGCTTGAGCAG+TGG + chr7_4:53131751-53131770 None:intergenic 45.0%
! GATTGAGATCTGCTTGTTGG+GGG + chr7_4:53131929-53131948 None:intergenic 45.0%
! GGATTGAGATCTGCTTGTTG+GGG + chr7_4:53131930-53131949 None:intergenic 45.0%
! TCGTAGCTAGGTTTTTCTGC+CGG + chr7_4:53131971-53131990 None:intergenic 45.0%
TTGGGGGAAAACGACATAAC+AGG - chr7_4:53132007-53132026 Msa1162430:intron 45.0%
!! TACTGGGTCTAGGGTTTTAG+TGG + chr7_4:53132166-53132185 None:intergenic 45.0%
CCCATTCACAATGTTCTTGG+TGG + chr7_4:53132334-53132353 None:intergenic 45.0%
GCCTGAAAACCTTGTTCTTG+AGG - chr7_4:53132377-53132396 Msa1162430:intron 45.0%
CCCTACTTTCCTCAAGAACA+AGG + chr7_4:53132389-53132408 None:intergenic 45.0%
TTCTTGAGGAAAGTAGGGGA+TGG - chr7_4:53132391-53132410 Msa1162430:intron 45.0%
GGGATGGAAAAAGATGAAGG+CGG - chr7_4:53132407-53132426 Msa1162430:intron 45.0%
TGGAAAAAGATGAAGGCGGT+TGG - chr7_4:53132411-53132430 Msa1162430:intron 45.0%
GGAAAAAGATGAAGGCGGTT+GGG - chr7_4:53132412-53132431 Msa1162430:intron 45.0%
!! GCTTTTTAGAGAGAAGGCAG+AGG - chr7_4:53132436-53132455 Msa1162430:intron 45.0%
!! GGCAGAGGTTTTTAGAGAGA+AGG - chr7_4:53132451-53132470 Msa1162430:CDS 45.0%
CAAGTCATGGCCCTTATAGA+GGG + chr7_4:53132722-53132741 None:intergenic 45.0%
TCAAGTCATGGCCCTTATAG+AGG + chr7_4:53132723-53132742 None:intergenic 45.0%
AGAATCTGTTGTCCTTGGGT+AGG - chr7_4:53132790-53132809 Msa1162430:intron 45.0%
GAATCTGTTGTCCTTGGGTA+GGG - chr7_4:53132791-53132810 Msa1162430:intron 45.0%
GATGGAAGGAGTAGTTCATG+GGG + chr7_4:53132832-53132851 None:intergenic 45.0%
GGATGGAAGGAGTAGTTCAT+GGG + chr7_4:53132833-53132852 None:intergenic 45.0%
TGGATGGAAGGAGTAGTTCA+TGG + chr7_4:53132834-53132853 None:intergenic 45.0%
CACATAGATATGGGGCTAGA+GGG + chr7_4:53133204-53133223 None:intergenic 45.0%
TCACATAGATATGGGGCTAG+AGG + chr7_4:53133205-53133224 None:intergenic 45.0%
CGATCACTGTAGTGATAGGA+AGG - chr7_4:53134664-53134683 Msa1162430:CDS 45.0%
!! AGCAAGGTGTTTTCTTGCCA+TGG - chr7_4:53134921-53134940 Msa1162430:CDS 45.0%
AACTCAATGCTCGCATACGA+TGG + chr7_4:53134957-53134976 None:intergenic 45.0%
!!! TTTTAATTTTTTTTAAAACA+CGG - chr7_4:53129583-53129602 Msa1162430:intron 5.0%
!! CTATATATTAATTAAAAATA+AGG - chr7_4:53134210-53134229 Msa1162430:intron 5.0%
!! TGATGATGACGGTGTTGAGG+TGG + chr7_4:53125486-53125505 Msa1162440:CDS 50.0%
TCTTCATCACCCTCTGTCCT+TGG - chr7_4:53125591-53125610 Msa1162430:intron 50.0%
AGAGCCACCCAAAGCTGTTA+AGG - chr7_4:53126708-53126727 Msa1162430:intron 50.0%
GAGAAGCAGCCAGAAAAAGC+AGG - chr7_4:53127248-53127267 Msa1162430:intron 50.0%
CAGCCAGAAAAAGCAGGCTT+AGG - chr7_4:53127254-53127273 Msa1162430:intron 50.0%
TAGGGCATGTTCTTTGGTGG+AGG - chr7_4:53127562-53127581 Msa1162430:intron 50.0%
! CTTTGGTGGAGGTGCAATGT+TGG - chr7_4:53127573-53127592 Msa1162430:intron 50.0%
GCAATGTTGGGAGGAGAACA+AGG - chr7_4:53127586-53127605 Msa1162430:intron 50.0%
TGTTCGACGTGGAATATGGG+AGG - chr7_4:53127724-53127743 Msa1162430:intron 50.0%
!! CGTTGCTTCATGTGGATTGG+TGG - chr7_4:53127939-53127958 Msa1162430:intron 50.0%
TGTTCATGGCCCTTGCCATT+TGG + chr7_4:53129011-53129030 Msa1162440:CDS 50.0%
CCATGCACTCTTCTCATTGG+TGG + chr7_4:53129862-53129881 Msa1162440:intron 50.0%
! CCACCAATGAGAAGAGTGCA+TGG - chr7_4:53129859-53129878 Msa1162430:intron 50.0%
! AAGAGTGCATGGCAAGACCT+TGG - chr7_4:53129870-53129889 Msa1162430:intron 50.0%
GTAGGTCCATGTTTCGCTAC+TGG + chr7_4:53130029-53130048 Msa1162440:intron 50.0%
GGAGCCAACTCATAAGCAAG+AGG - chr7_4:53130475-53130494 Msa1162430:intron 50.0%
GGAGCCTCTTGCTTATGAGT+TGG + chr7_4:53130482-53130501 Msa1162440:CDS 50.0%
GGTTCGCAATGGGAAACTTC+TGG + chr7_4:53130539-53130558 Msa1162440:CDS 50.0%
! GTTTTGTCGCAGGTTCGCAA+TGG + chr7_4:53130550-53130569 Msa1162440:CDS 50.0%
! CAAAGCACCATCCTGGTTGA+AGG + chr7_4:53130831-53130850 None:intergenic 50.0%
CCAGTGCCCCCAACAATAAT+CGG - chr7_4:53131371-53131390 Msa1162430:intron 50.0%
!! TGATTTCGTGGGGGTACTAC+TGG - chr7_4:53132758-53132777 Msa1162430:intron 50.0%
!! GATTTCGTGGGGGTACTACT+GGG - chr7_4:53132759-53132778 Msa1162430:intron 50.0%
AGTTCATGGGGTTGTGTGGT+AGG + chr7_4:53132820-53132839 None:intergenic 50.0%
GAGTAGTTCATGGGGTTGTG+TGG + chr7_4:53132824-53132843 None:intergenic 50.0%
ATCAGGGATGGAAACCCTAG+AGG + chr7_4:53134602-53134621 None:intergenic 50.0%
!! ACGATGGAAGTACTCAGCCA+TGG + chr7_4:53134941-53134960 None:intergenic 50.0%
!! TGCGAGCATTGAGTTCTCTG+TGG - chr7_4:53134962-53134981 Msa1162430:CDS 50.0%
!! GCGAGCATTGAGTTCTCTGT+GGG - chr7_4:53134963-53134982 Msa1162430:CDS 50.0%
! AGCATTGAGTTCTCTGTGGG+TGG - chr7_4:53134966-53134985 Msa1162430:CDS 50.0%
! GATGACGGTGTTGAGGTGGT+GGG + chr7_4:53125482-53125501 Msa1162440:CDS 55.0%
!! TGATGACGGTGTTGAGGTGG+TGG + chr7_4:53125483-53125502 Msa1162440:CDS 55.0%
!! CGTGCCTTAACAGCTTTGGG+TGG + chr7_4:53126715-53126734 Msa1162440:intron 55.0%
AGAGGCTGCAATGTTCGACG+TGG - chr7_4:53127713-53127732 Msa1162430:intron 55.0%
TCGACGTGGAATATGGGAGG+TGG - chr7_4:53127727-53127746 Msa1162430:intron 55.0%
GGAATATGGGAGGTGGCTTG+AGG - chr7_4:53127734-53127753 Msa1162430:intron 55.0%
GCGGAGAATAGGGAGGGAAA+TGG - chr7_4:53128163-53128182 Msa1162430:intron 55.0%
GGAGAAGAGGCTCTCTCTCA+AGG - chr7_4:53128901-53128920 Msa1162430:intron 55.0%
GGCTCTCTCTCAAGGACTTG+AGG - chr7_4:53128909-53128928 Msa1162430:intron 55.0%
! CGCTACTGGCCTCCATACTA+TGG + chr7_4:53130015-53130034 Msa1162440:intron 55.0%
TGGAGGCCAGTAGCGAAACA+TGG - chr7_4:53130020-53130039 Msa1162430:intron 55.0%
! CCGATTATTGTTGGGGGCAC+TGG + chr7_4:53131374-53131393 None:intergenic 55.0%
ACGACCTGGTCCCGTAACTA+TGG + chr7_4:53131698-53131717 None:intergenic 55.0%
GTGGTAGGTTTCCCTACCCA+AGG + chr7_4:53132805-53132824 None:intergenic 55.0%
! TTGCTGCTTGACGCGTCGTT+AGG + chr7_4:53134906-53134925 None:intergenic 55.0%
TAACGACGCGTCAAGCAGCA+AGG - chr7_4:53134905-53134924 Msa1162430:CDS 55.0%
!! GGGTGGCTCTGATCCTCTCT+TGG + chr7_4:53126698-53126717 Msa1162440:intron 60.0%
! GGTGGAGGTGCAATGTTGGG+AGG - chr7_4:53127577-53127596 Msa1162430:intron 60.0%
!! TCGTGGGGGTACTACTGGGT+AGG - chr7_4:53132763-53132782 Msa1162430:intron 60.0%
!! CGGTGTTGAGGTGGTGGGAG+TGG + chr7_4:53125477-53125496 Msa1162440:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 53125426 53135008 53125426 ID=Msa1162430;Name=Msa1162430
chr7_4 mRNA 53125426 53135008 53125426 ID=Msa1162430-mRNA-1;Parent=Msa1162430;Name=Msa1162430-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.09|0|1|0.81|0.66|12|0|461
chr7_4 exon 53134812 53135008 53134812 ID=Msa1162430-mRNA-1:exon:15348;Parent=Msa1162430-mRNA-1
chr7_4 exon 53134584 53134687 53134584 ID=Msa1162430-mRNA-1:exon:15347;Parent=Msa1162430-mRNA-1
chr7_4 exon 53133877 53133965 53133877 ID=Msa1162430-mRNA-1:exon:15346;Parent=Msa1162430-mRNA-1
chr7_4 exon 53133711 53133776 53133711 ID=Msa1162430-mRNA-1:exon:15345;Parent=Msa1162430-mRNA-1
chr7_4 exon 53133390 53133461 53133390 ID=Msa1162430-mRNA-1:exon:15344;Parent=Msa1162430-mRNA-1
chr7_4 exon 53133152 53133211 53133152 ID=Msa1162430-mRNA-1:exon:15343;Parent=Msa1162430-mRNA-1
chr7_4 exon 53132954 53133031 53132954 ID=Msa1162430-mRNA-1:exon:15342;Parent=Msa1162430-mRNA-1
chr7_4 exon 53132797 53132869 53132797 ID=Msa1162430-mRNA-1:exon:15341;Parent=Msa1162430-mRNA-1
chr7_4 exon 53132574 53132719 53132574 ID=Msa1162430-mRNA-1:exon:15340;Parent=Msa1162430-mRNA-1
chr7_4 exon 53132448 53132558 53132448 ID=Msa1162430-mRNA-1:exon:15339;Parent=Msa1162430-mRNA-1
chr7_4 exon 53131372 53131611 53131372 ID=Msa1162430-mRNA-1:exon:15338;Parent=Msa1162430-mRNA-1
chr7_4 exon 53125426 53125575 53125426 ID=Msa1162430-mRNA-1:exon:15337;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53134812 53135008 53134812 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53134584 53134687 53134584 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53133877 53133965 53133877 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53133711 53133776 53133711 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53133390 53133461 53133390 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53133152 53133211 53133152 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53132954 53133031 53132954 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53132797 53132869 53132797 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53132574 53132719 53132574 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53132448 53132558 53132448 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53131372 53131611 53131372 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
chr7_4 CDS 53125426 53125575 53125426 ID=Msa1162430-mRNA-1:cds;Parent=Msa1162430-mRNA-1
Gene Sequence

>Msa1162430

ATGGCTTCCAGTGTTGAAAAACCAAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCATCATCAACAACATAAACCACAACATCATCATCATCCAATACATGATCATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCTTGGAAACTACATCAGAAATAAAGATTCGGGAGCTTATGATTTGGGTGAATTGGATCAAGCCCTTTTTCTCTATCTTAATGGACAAACTGACCCATCCAGTGTTCAAGACCAAAAACAAAATTCAACATCAGGAATGAGGCCACCAACTCTCAACATTTTTCCTTCTCAGCCTATGCATGTAGAGCCATCATCGTCCAATTCTAAGGCTAGCATGGAGTTAGTTTCTCCGCAAACAAGTGGATCCAAGAGAGGATCAGAGCCACCCAAAGCTCGAGAGAAAAATCATGGCAAGGGTCCAACTTCAAGTTCAGAACATGAAGGACCTAAAACACCAGATCCTAAGATACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCCAGAAAAAGCAGGCTTAGGAAAAAGGCATATATACAACAGCTTGAGTCAAGCAGAATCAAACTTAATCAGATGGAACAGGAGCTACATCATGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATGTTGGGAGGAGAACAAGGCCTTCCTTCTATGAATACCATTAGCTCAGAGGCTGCAATGTTCGACGTGGAATATGGGAGGTGGCTTGAGGAGCACCACCGTTTAGTATGTGAACTAAGAGCTGCAGTTCATGAGCACATTCCTGAGAATGAGCTTAGAATGTTTGTGGACAAATTCTTGGCTCAATATGATCAAAGCTTAGTTGCAAAAGCAGATATATTTCATCTTGTTTCTGGCATGTGGGTTACCCCAATTGAACGTTGCTTCATGTGGATTGGTGGATTTAAGCCTTCTGAACTCATTAAGATCATTGTGAGTCAAATTGAACCATTGACCGAGCAACAAATAATGGGCATATATGGATTGCAACAATCTACACAACAGGGAGAAGAGGCTCTCTCTCAAGGACTTGAGGCTCTCAATCAAAATCTTTCTGAAACTATAACATCAGATTCATTGAGCTATCCTCCCAATATGACCAACTACATGGACCAAATGGCAAGGGCCATGAACAAACTCTCCACTCTTGAAAGTTTCGTGAGAGAGGCAGATAATCTACGACACCAAACCATTCATCGTCTGAATCAGATCCTAACGACGCGTCAAGCAGCAAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTATGCGAGCATTGAGTTCTCTGTGGGTGGCACGCCCTCGTCAAGAATAG

Protein sequence

>Msa1162430

MASSVEKPNQTTTQLEPLPPPQHRHHQIHHQQHKPQHHHHPIHDHNQISFGMMQSSSSPSVLGNYIRNKDSGAYDLGELDQALFLYLNGQTDPSSVQDQKQNSTSGMRPPTLNIFPSQPMHVEPSSSNSKASMELVSPQTSGSKRGSEPPKAREKNHGKGPTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELHHARNQGMFFGGGAMLGGEQGLPSMNTISSEAAMFDVEYGRWLEEHHRLVCELRAAVHEHIPENELRMFVDKFLAQYDQSLVAKADIFHLVSGMWVTPIERCFMWIGGFKPSELIKIIVSQIEPLTEQQIMGIYGLQQSTQQGEEALSQGLEALNQNLSETITSDSLSYPPNMTNYMDQMARAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRMRALSSLWVARPRQE*