Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055830 | sp|Q9SL95|MOT1_ARATH | 66.287 | 439 | 132 | 4 | 39 | 475 | 23 | 447 | 0.0 | 581 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055830 | A0A072VDZ3 | 97.314 | 484 | 10 | 1 | 1 | 484 | 1 | 481 | 0.0 | 950 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007370 | Msa0055830 | 0.930912 | 8.197273e-94 | -8.615850e-47 |
| Msa0011440 | Msa0055830 | -0.803435 | 3.490653e-49 | -8.615850e-47 |
| Msa0011450 | Msa0055830 | -0.815063 | 1.120143e-51 | -8.615850e-47 |
| Msa0055830 | Msa0055940 | 0.956263 | 4.450260e-114 | -8.615850e-47 |
| Msa0055830 | Msa0120160 | -0.801522 | 8.655498e-49 | -8.615850e-47 |
| Msa0055830 | Msa0151510 | -0.815155 | 1.068414e-51 | -8.615850e-47 |
| Msa0055830 | Msa0187590 | -0.800858 | 1.182959e-48 | -8.615850e-47 |
| Msa0055830 | Msa0198990 | 0.823831 | 1.120430e-53 | -8.615850e-47 |
| Msa0055830 | Msa0225190 | -0.804261 | 2.351406e-49 | -8.615850e-47 |
| Msa0055830 | Msa0241750 | 0.829037 | 6.440912e-55 | -8.615850e-47 |
| Msa0055830 | Msa0262350 | -0.805262 | 1.453215e-49 | -8.615850e-47 |
| Msa0055830 | Msa0313900 | 0.807632 | 4.596760e-50 | -8.615850e-47 |
| Msa0055830 | Msa0397420 | -0.802158 | 6.407683e-49 | -8.615850e-47 |
| Msa0055830 | Msa0420610 | 0.815742 | 7.911080e-52 | -8.615850e-47 |
| Msa0055830 | Msa0512630 | 0.825543 | 4.427578e-54 | -8.615850e-47 |
| Msa0055830 | Msa0800180 | 0.800779 | 1.227743e-48 | -8.615850e-47 |
| Msa0055830 | Msa0833270 | 0.800698 | 1.275592e-48 | -8.615850e-47 |
| Msa0055830 | Msa0882480 | -0.810155 | 1.326529e-50 | -8.615850e-47 |
| Msa0055830 | Msa0935840 | -0.801324 | 9.501151e-49 | -8.615850e-47 |
| Msa0055830 | Msa0966580 | 0.813042 | 3.126755e-51 | -8.615850e-47 |
| Msa0055830 | Msa1034950 | 0.804858 | 1.765769e-49 | -8.615850e-47 |
| Msa0055830 | Msa1075010 | 0.803521 | 3.351052e-49 | -8.615850e-47 |
| Msa0055830 | Msa1092310 | 0.805598 | 1.235811e-49 | -8.615850e-47 |
| Msa0055830 | Msa1193940 | 0.800797 | 1.217422e-48 | -8.615850e-47 |
| Msa0055830 | Msa1203650 | 0.801370 | 9.295764e-49 | -8.615850e-47 |
| Msa0055830 | Msa1268390 | 0.807505 | 4.892093e-50 | -8.615850e-47 |
| Msa0055830 | Msa1289050 | 0.800430 | 1.446307e-48 | -8.615850e-47 |
| Msa0055830 | Msa1408390 | 0.805009 | 1.641507e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055830 | MtrunA17_Chr1g0148451 | 97.314 | 484 | 10 | 1 | 1 | 484 | 1 | 481 | 0.0 | 950 |
| Msa0055830 | MtrunA17_Chr3g0105081 | 81.649 | 485 | 84 | 4 | 1 | 482 | 1 | 483 | 0.0 | 749 |
| Msa0055830 | MtrunA17_Chr1g0148521 | 76.582 | 474 | 90 | 3 | 1 | 473 | 1 | 454 | 0.0 | 723 |
| Msa0055830 | MtrunA17_Chr3g0138591 | 73.258 | 445 | 112 | 2 | 38 | 481 | 20 | 458 | 0.0 | 632 |
| Msa0055830 | MtrunA17_Chr4g0003941 | 56.563 | 419 | 175 | 3 | 52 | 467 | 37 | 451 | 4.25e-166 | 477 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0055830 | AT2G25680.1 | 66.287 | 439 | 132 | 4 | 39 | 475 | 23 | 447 | 0.0 | 581 |
| Msa0055830 | AT1G80310.1 | 55.746 | 409 | 168 | 6 | 52 | 458 | 31 | 428 | 4.44e-140 | 411 |
Find 121 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTGTCTGCACTGCATCTT+TGG | 0.095650 | 1_2:+11122534 | None:intergenic |
| CTTCATCACTCCTTTGAATT+TGG | 0.127643 | 1_2:+11121831 | None:intergenic |
| GTAACTGAAAATTCCCTTTC+AGG | 0.152803 | 1_2:+11121539 | None:intergenic |
| GTTGTACATGAAATTAAATT+TGG | 0.217740 | 1_2:-11121698 | Msa0055830:CDS |
| GGAGGGTGTGTTGCACTTCT+TGG | 0.238419 | 1_2:-11121401 | Msa0055830:CDS |
| CTCTTTCTTCAAATTTAGTT+TGG | 0.243561 | 1_2:+11121080 | None:intergenic |
| GGAGTGATTTCATGAGCTTC+TGG | 0.283217 | 1_2:+11122595 | None:intergenic |
| TCAAAATGGGCTGAAATTAA+TGG | 0.293645 | 1_2:-11122490 | Msa0055830:CDS |
| GACAGTTGGACTAATGAATT+TGG | 0.296173 | 1_2:-11121504 | Msa0055830:CDS |
| CTTCCAAAGTCTAAATCTTT+AGG | 0.296255 | 1_2:-11121986 | Msa0055830:CDS |
| TGAAATTCACTAAACAAAAT+TGG | 0.301984 | 1_2:-11121655 | Msa0055830:CDS |
| TAATGAATTTGGTTGGTTCT+TGG | 0.304946 | 1_2:-11121493 | Msa0055830:CDS |
| CTTGCTAGGGTTCTACTTCT+AGG | 0.308575 | 1_2:-11120950 | Msa0055830:three_prime_UTR |
| ATCATCACTGGTGTCATATA+TGG | 0.310944 | 1_2:-11122256 | Msa0055830:CDS |
| CTAGCAGGACAGTATAAATT+TGG | 0.316271 | 1_2:-11121434 | Msa0055830:CDS |
| GTAGTAGGAACTACTATTTA+TGG | 0.316279 | 1_2:-11120881 | Msa0055830:three_prime_UTR |
| TGCTCCGGAAGATGGTAATT+TGG | 0.316459 | 1_2:-11121858 | Msa0055830:CDS |
| AGACCTTGGTTTGGTTTAGA+TGG | 0.323003 | 1_2:-11121959 | Msa0055830:CDS |
| CTTTGTGTTAGGAATAGTTT+TGG | 0.330079 | 1_2:-11121741 | Msa0055830:CDS |
| CGCGGCAGCGATTGACTTCA+TGG | 0.332278 | 1_2:+11122213 | None:intergenic |
| TATTTGCACTGCTGTTTCAT+TGG | 0.337708 | 1_2:-11121216 | Msa0055830:CDS |
| TTGGTTTGGTTTAGATGGTT+TGG | 0.344318 | 1_2:-11121954 | Msa0055830:CDS |
| TTTGAATTGAAGGAGGGTTT+TGG | 0.351391 | 1_2:+11122626 | None:intergenic |
| TGCACTGCTGTTTCATTGGT+TGG | 0.352590 | 1_2:-11121212 | Msa0055830:CDS |
| AGTGTCTGCACTGCATCTTT+GGG | 0.354736 | 1_2:+11122535 | None:intergenic |
| CTAAACCAAACCAAGGTCTT+TGG | 0.362770 | 1_2:+11121963 | None:intergenic |
| GCCTTATCAGACAAAGATTT+CGG | 0.369692 | 1_2:-11122190 | Msa0055830:CDS |
| CTTTCTTAATCTATTCATCT+TGG | 0.374008 | 1_2:+11121796 | None:intergenic |
| CTAAACCATCATACTCAATA+TGG | 0.375739 | 1_2:-11122653 | Msa0055830:exon |
| ATTCCCCTCACAACAGATAA+AGG | 0.381862 | 1_2:+11122073 | None:intergenic |
| CCATCCAAATTACCATCTTC+CGG | 0.384151 | 1_2:+11121854 | None:intergenic |
| TCCTACTACTGCTAACTATA+TGG | 0.386968 | 1_2:+11120895 | None:intergenic |
| AGATAGGCTTTGTAACCAAT+TGG | 0.388424 | 1_2:+11122707 | None:intergenic |
| TATTATTGAGAGTAAACATT+AGG | 0.398520 | 1_2:+11120822 | None:intergenic |
| ATTGACTTCATGGGCTGAAC+AGG | 0.399970 | 1_2:+11122223 | None:intergenic |
| ACTAAACAAAATTGGAAGAA+AGG | 0.400604 | 1_2:-11121647 | Msa0055830:CDS |
| GGATCTGATGTTTGAATTGA+AGG | 0.402916 | 1_2:+11122616 | None:intergenic |
| ATAAACCACTTTCTACCATA+TGG | 0.403694 | 1_2:-11121115 | Msa0055830:CDS |
| GTTGGATCAAGTGCTGCTCT+TGG | 0.405444 | 1_2:-11121194 | Msa0055830:CDS |
| TGCAAAATTGGTATTGGGAT+TGG | 0.405472 | 1_2:-11121375 | Msa0055830:CDS |
| TGCAAATGAGTTAGTGTGTA+TGG | 0.409044 | 1_2:-11121030 | Msa0055830:three_prime_UTR |
| GAATGGTTTGTTGGAGGTGT+TGG | 0.409771 | 1_2:+11122574 | None:intergenic |
| CTTGTGGCTGAATGGTTTGT+TGG | 0.410139 | 1_2:+11122565 | None:intergenic |
| GGTGGCGTGCTCTTTGTTCT+CGG | 0.412718 | 1_2:-11122133 | Msa0055830:CDS |
| CTCTTTGTTCTCGGTATCAC+AGG | 0.413494 | 1_2:-11122124 | Msa0055830:CDS |
| TGGCCTAAAGATTTAGACTT+TGG | 0.414440 | 1_2:+11121983 | None:intergenic |
| AATTTGGTTGGTTCTTGGTT+TGG | 0.416663 | 1_2:-11121488 | Msa0055830:CDS |
| TGTTACTTAAGCTAAGGAAT+TGG | 0.417510 | 1_2:-11121145 | Msa0055830:CDS |
| GTGCCAACTTGTCATGGTGC+TGG | 0.439717 | 1_2:-11121461 | Msa0055830:CDS |
| ATCTTTGGGTTTGAAACTTG+TGG | 0.442751 | 1_2:+11122549 | None:intergenic |
| AGAAAAGAATGTGAATTGTT+TGG | 0.443386 | 1_2:+11122730 | None:intergenic |
| TAACTGAAAATTCCCTTTCA+GGG | 0.444301 | 1_2:+11121540 | None:intergenic |
| AACACACCTAAAATCCCAAC+TGG | 0.446139 | 1_2:+11121314 | None:intergenic |
| TTGTCATGTGAGGACTTGCT+AGG | 0.447851 | 1_2:-11120964 | Msa0055830:three_prime_UTR |
| GTATATAGTGGCTAAAAGAT+AGG | 0.457686 | 1_2:+11122691 | None:intergenic |
| TAGTGGTTGTTGCGGTGCTC+CGG | 0.457719 | 1_2:-11121873 | Msa0055830:CDS |
| GCCGAAATCTTTGTCTGATA+AGG | 0.459735 | 1_2:+11122189 | None:intergenic |
| TTAGGCCAAAGACCTTGGTT+TGG | 0.469202 | 1_2:-11121968 | Msa0055830:CDS |
| ATTGTGATTGTTAATGGAGC+TGG | 0.477827 | 1_2:-11121905 | Msa0055830:CDS |
| ATTCCAGCTGTCATTATCTC+TGG | 0.479556 | 1_2:+11122163 | None:intergenic |
| TATAAATTTGGTGGAAGGAG+TGG | 0.485473 | 1_2:-11121422 | Msa0055830:CDS |
| GTTTGAAACTTGTGGCTGAA+TGG | 0.492699 | 1_2:+11122557 | None:intergenic |
| AGAGTGAGAGCCAAGACTAT+AGG | 0.494228 | 1_2:+11122439 | None:intergenic |
| GTGGCTGAATGGTTTGTTGG+AGG | 0.495034 | 1_2:+11122568 | None:intergenic |
| GTATGCCATATTGAGTATGA+TGG | 0.500400 | 1_2:+11122648 | None:intergenic |
| AATGGTGCCATGGGTGATCT+TGG | 0.501937 | 1_2:-11122472 | Msa0055830:CDS |
| GGTGCTGTGCCAACTTGTCA+TGG | 0.504890 | 1_2:-11121467 | Msa0055830:CDS |
| AATATTGACAATGGAAGTTG+TGG | 0.510322 | 1_2:+11121605 | None:intergenic |
| AATCTTTAGGCCAAAGACCT+TGG | 0.514844 | 1_2:-11121973 | Msa0055830:CDS |
| CATGGTGCTGGTGGACTAGC+AGG | 0.515807 | 1_2:-11121449 | Msa0055830:CDS |
| TTTATGTGTTACTTAAGCTA+AGG | 0.517035 | 1_2:-11121151 | Msa0055830:CDS |
| TGTCATGTGAGGACTTGCTA+GGG | 0.517780 | 1_2:-11120963 | Msa0055830:three_prime_UTR |
| CCAACTTGTCATGGTGCTGG+TGG | 0.520067 | 1_2:-11121458 | Msa0055830:CDS |
| TTCATTACTTCTATTGAAGA+GGG | 0.520592 | 1_2:+11121674 | None:intergenic |
| CTGATGTTTGAATTGAAGGA+GGG | 0.521335 | 1_2:+11122620 | None:intergenic |
| GATTCCTTTATCTGTTGTGA+GGG | 0.522285 | 1_2:-11122077 | Msa0055830:CDS |
| TACATATATACCTATAGTCT+TGG | 0.528025 | 1_2:-11122449 | Msa0055830:CDS |
| ATTTGGATGGCCAAATTCAA+AGG | 0.528754 | 1_2:-11121841 | Msa0055830:CDS |
| TAGTAAAGAAGATTCATTTG+TGG | 0.533352 | 1_2:-11121243 | Msa0055830:CDS |
| GTTGGACTAATGAATTTGGT+TGG | 0.533471 | 1_2:-11121500 | Msa0055830:CDS |
| TTTCATTACTTCTATTGAAG+AGG | 0.535293 | 1_2:+11121673 | None:intergenic |
| TCAATGTGGTGCCAAGGTTG+AGG | 0.535731 | 1_2:+11122407 | None:intergenic |
| TGGTTCCATATGGTAGAAAG+TGG | 0.540368 | 1_2:+11121110 | None:intergenic |
| AAATTTGGTGGAAGGAGTGG+AGG | 0.544542 | 1_2:-11121419 | Msa0055830:CDS |
| GGCTGAAATTAATGGTGCCA+TGG | 0.548607 | 1_2:-11122482 | Msa0055830:CDS |
| ACATCAATTTCAGTGACAGT+TGG | 0.550766 | 1_2:-11121518 | Msa0055830:CDS |
| ACCATATAGTTAGCAGTAGT+AGG | 0.551028 | 1_2:-11120896 | Msa0055830:three_prime_UTR |
| GCGGCAGCGATTGACTTCAT+GGG | 0.552618 | 1_2:+11122214 | None:intergenic |
| CAATTGTTTAGAGTATATAG+TGG | 0.553449 | 1_2:+11122679 | None:intergenic |
| CCGGAAGATGGTAATTTGGA+TGG | 0.556838 | 1_2:-11121854 | Msa0055830:CDS |
| GCAGGACAGTATAAATTTGG+TGG | 0.559975 | 1_2:-11121431 | Msa0055830:CDS |
| CAAATTCAAAGGAGTGATGA+AGG | 0.562407 | 1_2:-11121830 | Msa0055830:CDS |
| TGTTGCGGTGCTCCGGAAGA+TGG | 0.568204 | 1_2:-11121866 | Msa0055830:CDS |
| AATTTGGTGGAAGGAGTGGA+GGG | 0.568259 | 1_2:-11121418 | Msa0055830:CDS |
| TGATTCCTTTATCTGTTGTG+AGG | 0.568857 | 1_2:-11122078 | Msa0055830:CDS |
| ATGACAGCTGGAATCTTGAC+CGG | 0.569949 | 1_2:-11122154 | Msa0055830:CDS |
| CCACCAGCACCATGACAAGT+TGG | 0.570149 | 1_2:+11121458 | None:intergenic |
| GACAGTATAAATTTGGTGGA+AGG | 0.570297 | 1_2:-11121427 | Msa0055830:CDS |
| CTTGGCTCTCACTCTAGCTA+AGG | 0.577324 | 1_2:-11122431 | Msa0055830:CDS |
| CATGAAGTCAATCGCTGCCG+CGG | 0.579851 | 1_2:-11122212 | Msa0055830:CDS |
| ATTCCTTTATCTGTTGTGAG+GGG | 0.583159 | 1_2:-11122076 | Msa0055830:CDS |
| CTAGCTAAGGACCTCAACCT+TGG | 0.586821 | 1_2:-11122418 | Msa0055830:CDS |
| GGTGTCTACAACATCATCAC+TGG | 0.588180 | 1_2:-11122268 | Msa0055830:CDS |
| TATCACAGGATTGATGCAGC+TGG | 0.589104 | 1_2:-11122110 | Msa0055830:CDS |
| TCTGATGTTTGAATTGAAGG+AGG | 0.598428 | 1_2:+11122619 | None:intergenic |
| AATAAAACAAGCACAAACAA+TGG | 0.599249 | 1_2:+11121925 | None:intergenic |
| ACAAAGACTATAAAAGCAGA+AGG | 0.601245 | 1_2:+11121758 | None:intergenic |
| GTGCCAGAGATAATGACAGC+TGG | 0.605476 | 1_2:-11122166 | Msa0055830:CDS |
| ACTGAGTTCAATATTGACAA+TGG | 0.607400 | 1_2:+11121596 | None:intergenic |
| GAGAACAAAGAGCACGCCAC+CGG | 0.612127 | 1_2:+11122135 | None:intergenic |
| GATAGCATACATAAGTTACA+TGG | 0.625846 | 1_2:+11120850 | None:intergenic |
| ATCTTTGTCTGATAAGGCCG+CGG | 0.630622 | 1_2:+11122195 | None:intergenic |
| GCTGAAATTAATGGTGCCAT+GGG | 0.646415 | 1_2:-11122481 | Msa0055830:CDS |
| TTCATGGGCTGAACAGGCAT+AGG | 0.650381 | 1_2:+11122229 | None:intergenic |
| ATTCAAAGGAGTGATGAAGG+TGG | 0.653705 | 1_2:-11121827 | Msa0055830:CDS |
| TGAAAATCAATGTGGTGCCA+AGG | 0.655634 | 1_2:+11122401 | None:intergenic |
| ATATGTACCAAGATCACCCA+TGG | 0.656064 | 1_2:+11122465 | None:intergenic |
| AGGGGAATTCAACTAGCACA+AGG | 0.671542 | 1_2:-11122058 | Msa0055830:CDS |
| ACAGCTGGAATCTTGACCGG+TGG | 0.675343 | 1_2:-11122151 | Msa0055830:CDS |
| AAACCATCTAAACCAAACCA+AGG | 0.711313 | 1_2:+11121956 | None:intergenic |
| TATACCGTTGAAAATCAATG+TGG | 0.718574 | 1_2:+11122393 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTATTGTGATTGTTAA+TGG | - | chr1_2:11121672-11121691 | Msa0055830:CDS | 20.0% |
| !! | GTTGTACATGAAATTAAATT+TGG | - | chr1_2:11121885-11121904 | Msa0055830:CDS | 20.0% |
| !! | TGAAATTCACTAAACAAAAT+TGG | - | chr1_2:11121928-11121947 | Msa0055830:CDS | 20.0% |
| !!! | TGTTTTATTGTGATTGTTAA+TGG | - | chr1_2:11121672-11121691 | Msa0055830:CDS | 20.0% |
| !! | GTTGTACATGAAATTAAATT+TGG | - | chr1_2:11121885-11121904 | Msa0055830:CDS | 20.0% |
| !! | TGAAATTCACTAAACAAAAT+TGG | - | chr1_2:11121928-11121947 | Msa0055830:CDS | 20.0% |
| ! | AGAAAAGAATGTGAATTGTT+TGG | + | chr1_2:11120856-11120875 | None:intergenic | 25.0% |
| !! | CAATTGTTTAGAGTATATAG+TGG | + | chr1_2:11120907-11120926 | None:intergenic | 25.0% |
| ! | TACATATATACCTATAGTCT+TGG | - | chr1_2:11121134-11121153 | Msa0055830:CDS | 25.0% |
| ! | TTTCTTATGTAATTCATGTC+CGG | - | chr1_2:11121283-11121302 | Msa0055830:CDS | 25.0% |
| ! | AATAAAACAAGCACAAACAA+TGG | + | chr1_2:11121661-11121680 | None:intergenic | 25.0% |
| ! | CTTTCTTAATCTATTCATCT+TGG | + | chr1_2:11121790-11121809 | None:intergenic | 25.0% |
| ! | TTCATTACTTCTATTGAAGA+GGG | + | chr1_2:11121912-11121931 | None:intergenic | 25.0% |
| ! | TTTCATTACTTCTATTGAAG+AGG | + | chr1_2:11121913-11121932 | None:intergenic | 25.0% |
| ! | ACTAAACAAAATTGGAAGAA+AGG | - | chr1_2:11121936-11121955 | Msa0055830:CDS | 25.0% |
| !!! | TGGAAGAAAGGTTTTATTAA+AGG | - | chr1_2:11121948-11121967 | Msa0055830:CDS | 25.0% |
| ! | TAGTAAAGAAGATTCATTTG+TGG | - | chr1_2:11122340-11122359 | Msa0055830:intron | 25.0% |
| !!! | TTTATGTGTTACTTAAGCTA+AGG | - | chr1_2:11122432-11122451 | Msa0055830:CDS | 25.0% |
| !!! | AAATTTAGTTTGGACTTTTC+TGG | + | chr1_2:11122496-11122515 | None:intergenic | 25.0% |
| ! | CTCTTTCTTCAAATTTAGTT+TGG | + | chr1_2:11122506-11122525 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTATTGTCATGTG+AGG | - | chr1_2:11122609-11122628 | Msa0055830:CDS | 25.0% |
| ! | AGAAAAGAATGTGAATTGTT+TGG | + | chr1_2:11120856-11120875 | None:intergenic | 25.0% |
| !! | CAATTGTTTAGAGTATATAG+TGG | + | chr1_2:11120907-11120926 | None:intergenic | 25.0% |
| ! | TACATATATACCTATAGTCT+TGG | - | chr1_2:11121134-11121153 | Msa0055830:CDS | 25.0% |
| ! | TTTCTTATGTAATTCATGTC+CGG | - | chr1_2:11121283-11121302 | Msa0055830:CDS | 25.0% |
| ! | AATAAAACAAGCACAAACAA+TGG | + | chr1_2:11121661-11121680 | None:intergenic | 25.0% |
| ! | CTTTCTTAATCTATTCATCT+TGG | + | chr1_2:11121790-11121809 | None:intergenic | 25.0% |
| ! | TTCATTACTTCTATTGAAGA+GGG | + | chr1_2:11121912-11121931 | None:intergenic | 25.0% |
| ! | TTTCATTACTTCTATTGAAG+AGG | + | chr1_2:11121913-11121932 | None:intergenic | 25.0% |
| ! | ACTAAACAAAATTGGAAGAA+AGG | - | chr1_2:11121936-11121955 | Msa0055830:CDS | 25.0% |
| !!! | TGGAAGAAAGGTTTTATTAA+AGG | - | chr1_2:11121948-11121967 | Msa0055830:CDS | 25.0% |
| ! | TAGTAAAGAAGATTCATTTG+TGG | - | chr1_2:11122340-11122359 | Msa0055830:intron | 25.0% |
| !!! | TTTATGTGTTACTTAAGCTA+AGG | - | chr1_2:11122432-11122451 | Msa0055830:CDS | 25.0% |
| !!! | AAATTTAGTTTGGACTTTTC+TGG | + | chr1_2:11122496-11122515 | None:intergenic | 25.0% |
| ! | CTCTTTCTTCAAATTTAGTT+TGG | + | chr1_2:11122506-11122525 | None:intergenic | 25.0% |
| !!! | AGTTTTTTTATTGTCATGTG+AGG | - | chr1_2:11122609-11122628 | Msa0055830:CDS | 25.0% |
| ! | TTCACATTCTTTTCTCCAAT+TGG | - | chr1_2:11120861-11120880 | Msa0055830:three_prime_UTR | 30.0% |
| GTATATAGTGGCTAAAAGAT+AGG | + | chr1_2:11120895-11120914 | None:intergenic | 30.0% | |
| CTAAACCATCATACTCAATA+TGG | - | chr1_2:11120930-11120949 | Msa0055830:three_prime_UTR | 30.0% | |
| !!! | ACTTTGTTTTCCGTTCAAAA+TGG | - | chr1_2:11121079-11121098 | Msa0055830:exon | 30.0% |
| !!! | CTTTGTTTTCCGTTCAAAAT+GGG | - | chr1_2:11121080-11121099 | Msa0055830:exon | 30.0% |
| ! | TAATTTCAGCCCATTTTGAA+CGG | + | chr1_2:11121092-11121111 | None:intergenic | 30.0% |
| !! | TCAAAATGGGCTGAAATTAA+TGG | - | chr1_2:11121093-11121112 | Msa0055830:exon | 30.0% |
| TATACCGTTGAAAATCAATG+TGG | + | chr1_2:11121193-11121212 | None:intergenic | 30.0% | |
| CTTCCAAAGTCTAAATCTTT+AGG | - | chr1_2:11121597-11121616 | Msa0055830:CDS | 30.0% | |
| ACAAAGACTATAAAAGCAGA+AGG | + | chr1_2:11121828-11121847 | None:intergenic | 30.0% | |
| ! | GCTTTTATAGTCTTTGTGTT+AGG | - | chr1_2:11121831-11121850 | Msa0055830:CDS | 30.0% |
| ! | CTTTGTGTTAGGAATAGTTT+TGG | - | chr1_2:11121842-11121861 | Msa0055830:CDS | 30.0% |
| AATATTGACAATGGAAGTTG+TGG | + | chr1_2:11121981-11122000 | None:intergenic | 30.0% | |
| ACTGAGTTCAATATTGACAA+TGG | + | chr1_2:11121990-11122009 | None:intergenic | 30.0% | |
| TAACTGAAAATTCCCTTTCA+GGG | + | chr1_2:11122046-11122065 | None:intergenic | 30.0% | |
| ! | TAATGAATTTGGTTGGTTCT+TGG | - | chr1_2:11122090-11122109 | Msa0055830:CDS | 30.0% |
| !!! | ACTTCTTGGTTTTGCAAAAT+TGG | - | chr1_2:11122196-11122215 | Msa0055830:CDS | 30.0% |
| !! | TGGTTTTGCAAAATTGGTAT+TGG | - | chr1_2:11122202-11122221 | Msa0055830:CDS | 30.0% |
| ! | GGTTTTGCAAAATTGGTATT+GGG | - | chr1_2:11122203-11122222 | Msa0055830:CDS | 30.0% |
| !!! | ATTGGTTTTAGGAACATCTT+TGG | - | chr1_2:11122226-11122245 | Msa0055830:CDS | 30.0% |
| ! | ATTTTGCAACAATTTCCAGT+TGG | - | chr1_2:11122254-11122273 | Msa0055830:CDS | 30.0% |
| ! | TTTTGCAACAATTTCCAGTT+GGG | - | chr1_2:11122255-11122274 | Msa0055830:CDS | 30.0% |
| ! | TGTTACTTAAGCTAAGGAAT+TGG | - | chr1_2:11122438-11122457 | Msa0055830:CDS | 30.0% |
| ATAAACCACTTTCTACCATA+TGG | - | chr1_2:11122468-11122487 | Msa0055830:CDS | 30.0% | |
| !!! | TAATATGCTGATTTTCTGTG+AGG | - | chr1_2:11122582-11122601 | Msa0055830:CDS | 30.0% |
| GTAGTAGGAACTACTATTTA+TGG | - | chr1_2:11122702-11122721 | Msa0055830:five_prime_UTR | 30.0% | |
| GATAGCATACATAAGTTACA+TGG | + | chr1_2:11122736-11122755 | None:intergenic | 30.0% | |
| ! | TTCACATTCTTTTCTCCAAT+TGG | - | chr1_2:11120861-11120880 | Msa0055830:three_prime_UTR | 30.0% |
| GTATATAGTGGCTAAAAGAT+AGG | + | chr1_2:11120895-11120914 | None:intergenic | 30.0% | |
| CTAAACCATCATACTCAATA+TGG | - | chr1_2:11120930-11120949 | Msa0055830:three_prime_UTR | 30.0% | |
| !!! | ACTTTGTTTTCCGTTCAAAA+TGG | - | chr1_2:11121079-11121098 | Msa0055830:exon | 30.0% |
| !!! | CTTTGTTTTCCGTTCAAAAT+GGG | - | chr1_2:11121080-11121099 | Msa0055830:exon | 30.0% |
| ! | TAATTTCAGCCCATTTTGAA+CGG | + | chr1_2:11121092-11121111 | None:intergenic | 30.0% |
| !! | TCAAAATGGGCTGAAATTAA+TGG | - | chr1_2:11121093-11121112 | Msa0055830:exon | 30.0% |
| TATACCGTTGAAAATCAATG+TGG | + | chr1_2:11121193-11121212 | None:intergenic | 30.0% | |
| CTTCCAAAGTCTAAATCTTT+AGG | - | chr1_2:11121597-11121616 | Msa0055830:CDS | 30.0% | |
| ACAAAGACTATAAAAGCAGA+AGG | + | chr1_2:11121828-11121847 | None:intergenic | 30.0% | |
| ! | GCTTTTATAGTCTTTGTGTT+AGG | - | chr1_2:11121831-11121850 | Msa0055830:CDS | 30.0% |
| ! | CTTTGTGTTAGGAATAGTTT+TGG | - | chr1_2:11121842-11121861 | Msa0055830:CDS | 30.0% |
| AATATTGACAATGGAAGTTG+TGG | + | chr1_2:11121981-11122000 | None:intergenic | 30.0% | |
| ACTGAGTTCAATATTGACAA+TGG | + | chr1_2:11121990-11122009 | None:intergenic | 30.0% | |
| TAACTGAAAATTCCCTTTCA+GGG | + | chr1_2:11122046-11122065 | None:intergenic | 30.0% | |
| ! | TAATGAATTTGGTTGGTTCT+TGG | - | chr1_2:11122090-11122109 | Msa0055830:CDS | 30.0% |
| !!! | ACTTCTTGGTTTTGCAAAAT+TGG | - | chr1_2:11122196-11122215 | Msa0055830:CDS | 30.0% |
| !! | TGGTTTTGCAAAATTGGTAT+TGG | - | chr1_2:11122202-11122221 | Msa0055830:CDS | 30.0% |
| ! | GGTTTTGCAAAATTGGTATT+GGG | - | chr1_2:11122203-11122222 | Msa0055830:CDS | 30.0% |
| !!! | ATTGGTTTTAGGAACATCTT+TGG | - | chr1_2:11122226-11122245 | Msa0055830:CDS | 30.0% |
| ! | ATTTTGCAACAATTTCCAGT+TGG | - | chr1_2:11122254-11122273 | Msa0055830:CDS | 30.0% |
| ! | TTTTGCAACAATTTCCAGTT+GGG | - | chr1_2:11122255-11122274 | Msa0055830:CDS | 30.0% |
| ! | TGTTACTTAAGCTAAGGAAT+TGG | - | chr1_2:11122438-11122457 | Msa0055830:CDS | 30.0% |
| ATAAACCACTTTCTACCATA+TGG | - | chr1_2:11122468-11122487 | Msa0055830:CDS | 30.0% | |
| !!! | TAATATGCTGATTTTCTGTG+AGG | - | chr1_2:11122582-11122601 | Msa0055830:CDS | 30.0% |
| GTAGTAGGAACTACTATTTA+TGG | - | chr1_2:11122702-11122721 | Msa0055830:five_prime_UTR | 30.0% | |
| GATAGCATACATAAGTTACA+TGG | + | chr1_2:11122736-11122755 | None:intergenic | 30.0% | |
| ! | AGATAGGCTTTGTAACCAAT+TGG | + | chr1_2:11120879-11120898 | None:intergenic | 35.0% |
| GTATGCCATATTGAGTATGA+TGG | + | chr1_2:11120938-11120957 | None:intergenic | 35.0% | |
| ! | TTTGAATTGAAGGAGGGTTT+TGG | + | chr1_2:11120960-11120979 | None:intergenic | 35.0% |
| CTGATGTTTGAATTGAAGGA+GGG | + | chr1_2:11120966-11120985 | None:intergenic | 35.0% | |
| TCTGATGTTTGAATTGAAGG+AGG | + | chr1_2:11120967-11120986 | None:intergenic | 35.0% | |
| GGATCTGATGTTTGAATTGA+AGG | + | chr1_2:11120970-11120989 | None:intergenic | 35.0% | |
| ! | ATCTTTGGGTTTGAAACTTG+TGG | + | chr1_2:11121037-11121056 | None:intergenic | 35.0% |
| !! | ATCATCACTGGTGTCATATA+TGG | - | chr1_2:11121327-11121346 | Msa0055830:CDS | 35.0% |
| GCCTTATCAGACAAAGATTT+CGG | - | chr1_2:11121393-11121412 | Msa0055830:CDS | 35.0% | |
| TGATTCCTTTATCTGTTGTG+AGG | - | chr1_2:11121505-11121524 | Msa0055830:CDS | 35.0% | |
| GATTCCTTTATCTGTTGTGA+GGG | - | chr1_2:11121506-11121525 | Msa0055830:CDS | 35.0% | |
| ATTCCTTTATCTGTTGTGAG+GGG | - | chr1_2:11121507-11121526 | Msa0055830:CDS | 35.0% | |
| TGGCCTAAAGATTTAGACTT+TGG | + | chr1_2:11121603-11121622 | None:intergenic | 35.0% | |
| AAACCATCTAAACCAAACCA+AGG | + | chr1_2:11121630-11121649 | None:intergenic | 35.0% | |
| !! | TTGGTTTGGTTTAGATGGTT+TGG | - | chr1_2:11121629-11121648 | Msa0055830:CDS | 35.0% |
| ATTGTGATTGTTAATGGAGC+TGG | - | chr1_2:11121678-11121697 | Msa0055830:CDS | 35.0% | |
| CAGAAAAATAGTGGTTGTTG+CGG | - | chr1_2:11121702-11121721 | Msa0055830:CDS | 35.0% | |
| ATTTGGATGGCCAAATTCAA+AGG | - | chr1_2:11121742-11121761 | Msa0055830:CDS | 35.0% | |
| CTTCATCACTCCTTTGAATT+TGG | + | chr1_2:11121755-11121774 | None:intergenic | 35.0% | |
| CAAATTCAAAGGAGTGATGA+AGG | - | chr1_2:11121753-11121772 | Msa0055830:CDS | 35.0% | |
| ! | AACAGATCTTTTCCCTGAAA+GGG | - | chr1_2:11122031-11122050 | Msa0055830:CDS | 35.0% |
| GTAACTGAAAATTCCCTTTC+AGG | + | chr1_2:11122047-11122066 | None:intergenic | 35.0% | |
| ACATCAATTTCAGTGACAGT+TGG | - | chr1_2:11122065-11122084 | Msa0055830:CDS | 35.0% | |
| GACAGTTGGACTAATGAATT+TGG | - | chr1_2:11122079-11122098 | Msa0055830:CDS | 35.0% | |
| GTTGGACTAATGAATTTGGT+TGG | - | chr1_2:11122083-11122102 | Msa0055830:CDS | 35.0% | |
| ! | AATTTGGTTGGTTCTTGGTT+TGG | - | chr1_2:11122095-11122114 | Msa0055830:CDS | 35.0% |
| CTAGCAGGACAGTATAAATT+TGG | - | chr1_2:11122149-11122168 | Msa0055830:CDS | 35.0% | |
| ! | GACAGTATAAATTTGGTGGA+AGG | - | chr1_2:11122156-11122175 | Msa0055830:CDS | 35.0% |
| ! | TATAAATTTGGTGGAAGGAG+TGG | - | chr1_2:11122161-11122180 | Msa0055830:CDS | 35.0% |
| ! | TGCAAAATTGGTATTGGGAT+TGG | - | chr1_2:11122208-11122227 | Msa0055830:CDS | 35.0% |
| !!! | TTGGTATTGGGATTGGTTTT+AGG | - | chr1_2:11122215-11122234 | Msa0055830:CDS | 35.0% |
| ! | CAATTTCCAGTTGGGATTTT+AGG | - | chr1_2:11122263-11122282 | Msa0055830:CDS | 35.0% |
| !! | TATTTGCACTGCTGTTTCAT+TGG | - | chr1_2:11122367-11122386 | Msa0055830:intron | 35.0% |
| TGCAAATGAGTTAGTGTGTA+TGG | - | chr1_2:11122553-11122572 | Msa0055830:CDS | 35.0% | |
| ACCATATAGTTAGCAGTAGT+AGG | - | chr1_2:11122687-11122706 | Msa0055830:five_prime_UTR | 35.0% | |
| TCCTACTACTGCTAACTATA+TGG | + | chr1_2:11122691-11122710 | None:intergenic | 35.0% | |
| ! | AGATAGGCTTTGTAACCAAT+TGG | + | chr1_2:11120879-11120898 | None:intergenic | 35.0% |
| GTATGCCATATTGAGTATGA+TGG | + | chr1_2:11120938-11120957 | None:intergenic | 35.0% | |
| ! | TTTGAATTGAAGGAGGGTTT+TGG | + | chr1_2:11120960-11120979 | None:intergenic | 35.0% |
| CTGATGTTTGAATTGAAGGA+GGG | + | chr1_2:11120966-11120985 | None:intergenic | 35.0% | |
| TCTGATGTTTGAATTGAAGG+AGG | + | chr1_2:11120967-11120986 | None:intergenic | 35.0% | |
| GGATCTGATGTTTGAATTGA+AGG | + | chr1_2:11120970-11120989 | None:intergenic | 35.0% | |
| ! | ATCTTTGGGTTTGAAACTTG+TGG | + | chr1_2:11121037-11121056 | None:intergenic | 35.0% |
| !! | ATCATCACTGGTGTCATATA+TGG | - | chr1_2:11121327-11121346 | Msa0055830:CDS | 35.0% |
| GCCTTATCAGACAAAGATTT+CGG | - | chr1_2:11121393-11121412 | Msa0055830:CDS | 35.0% | |
| TGATTCCTTTATCTGTTGTG+AGG | - | chr1_2:11121505-11121524 | Msa0055830:CDS | 35.0% | |
| GATTCCTTTATCTGTTGTGA+GGG | - | chr1_2:11121506-11121525 | Msa0055830:CDS | 35.0% | |
| ATTCCTTTATCTGTTGTGAG+GGG | - | chr1_2:11121507-11121526 | Msa0055830:CDS | 35.0% | |
| TGGCCTAAAGATTTAGACTT+TGG | + | chr1_2:11121603-11121622 | None:intergenic | 35.0% | |
| AAACCATCTAAACCAAACCA+AGG | + | chr1_2:11121630-11121649 | None:intergenic | 35.0% | |
| !! | TTGGTTTGGTTTAGATGGTT+TGG | - | chr1_2:11121629-11121648 | Msa0055830:CDS | 35.0% |
| ATTGTGATTGTTAATGGAGC+TGG | - | chr1_2:11121678-11121697 | Msa0055830:CDS | 35.0% | |
| CAGAAAAATAGTGGTTGTTG+CGG | - | chr1_2:11121702-11121721 | Msa0055830:CDS | 35.0% | |
| ATTTGGATGGCCAAATTCAA+AGG | - | chr1_2:11121742-11121761 | Msa0055830:CDS | 35.0% | |
| CTTCATCACTCCTTTGAATT+TGG | + | chr1_2:11121755-11121774 | None:intergenic | 35.0% | |
| CAAATTCAAAGGAGTGATGA+AGG | - | chr1_2:11121753-11121772 | Msa0055830:CDS | 35.0% | |
| ! | AACAGATCTTTTCCCTGAAA+GGG | - | chr1_2:11122031-11122050 | Msa0055830:CDS | 35.0% |
| GTAACTGAAAATTCCCTTTC+AGG | + | chr1_2:11122047-11122066 | None:intergenic | 35.0% | |
| ACATCAATTTCAGTGACAGT+TGG | - | chr1_2:11122065-11122084 | Msa0055830:CDS | 35.0% | |
| GACAGTTGGACTAATGAATT+TGG | - | chr1_2:11122079-11122098 | Msa0055830:CDS | 35.0% | |
| GTTGGACTAATGAATTTGGT+TGG | - | chr1_2:11122083-11122102 | Msa0055830:CDS | 35.0% | |
| ! | AATTTGGTTGGTTCTTGGTT+TGG | - | chr1_2:11122095-11122114 | Msa0055830:CDS | 35.0% |
| CTAGCAGGACAGTATAAATT+TGG | - | chr1_2:11122149-11122168 | Msa0055830:CDS | 35.0% | |
| ! | GACAGTATAAATTTGGTGGA+AGG | - | chr1_2:11122156-11122175 | Msa0055830:CDS | 35.0% |
| ! | TATAAATTTGGTGGAAGGAG+TGG | - | chr1_2:11122161-11122180 | Msa0055830:CDS | 35.0% |
| ! | TGCAAAATTGGTATTGGGAT+TGG | - | chr1_2:11122208-11122227 | Msa0055830:CDS | 35.0% |
| !!! | TTGGTATTGGGATTGGTTTT+AGG | - | chr1_2:11122215-11122234 | Msa0055830:CDS | 35.0% |
| ! | CAATTTCCAGTTGGGATTTT+AGG | - | chr1_2:11122263-11122282 | Msa0055830:CDS | 35.0% |
| !! | TATTTGCACTGCTGTTTCAT+TGG | - | chr1_2:11122367-11122386 | Msa0055830:intron | 35.0% |
| TGCAAATGAGTTAGTGTGTA+TGG | - | chr1_2:11122553-11122572 | Msa0055830:CDS | 35.0% | |
| ACCATATAGTTAGCAGTAGT+AGG | - | chr1_2:11122687-11122706 | Msa0055830:five_prime_UTR | 35.0% | |
| TCCTACTACTGCTAACTATA+TGG | + | chr1_2:11122691-11122710 | None:intergenic | 35.0% | |
| ! | GTTTGAAACTTGTGGCTGAA+TGG | + | chr1_2:11121029-11121048 | None:intergenic | 40.0% |
| !! | GCTGAAATTAATGGTGCCAT+GGG | - | chr1_2:11121102-11121121 | Msa0055830:CDS | 40.0% |
| ATATGTACCAAGATCACCCA+TGG | + | chr1_2:11121121-11121140 | None:intergenic | 40.0% | |
| ! | TGAAAATCAATGTGGTGCCA+AGG | + | chr1_2:11121185-11121204 | None:intergenic | 40.0% |
| !!! | GGCACCACATTGATTTTCAA+CGG | - | chr1_2:11121186-11121205 | Msa0055830:CDS | 40.0% |
| ATTCATGTCCGGAATCTTTC+AGG | - | chr1_2:11121294-11121313 | Msa0055830:CDS | 40.0% | |
| TGTAGACACCTGAAAGATTC+CGG | + | chr1_2:11121305-11121324 | None:intergenic | 40.0% | |
| GCCGAAATCTTTGTCTGATA+AGG | + | chr1_2:11121397-11121416 | None:intergenic | 40.0% | |
| ATTCCAGCTGTCATTATCTC+TGG | + | chr1_2:11121423-11121442 | None:intergenic | 40.0% | |
| ATTCCCCTCACAACAGATAA+AGG | + | chr1_2:11121513-11121532 | None:intergenic | 40.0% | |
| AATCTTTAGGCCAAAGACCT+TGG | - | chr1_2:11121610-11121629 | Msa0055830:CDS | 40.0% | |
| CTAAACCAAACCAAGGTCTT+TGG | + | chr1_2:11121623-11121642 | None:intergenic | 40.0% | |
| !! | AGACCTTGGTTTGGTTTAGA+TGG | - | chr1_2:11121624-11121643 | Msa0055830:CDS | 40.0% |
| !! | CGCAACAACCACTATTTTTC+TGG | + | chr1_2:11121704-11121723 | None:intergenic | 40.0% |
| CCATCCAAATTACCATCTTC+CGG | + | chr1_2:11121732-11121751 | None:intergenic | 40.0% | |
| ATTCAAAGGAGTGATGAAGG+TGG | - | chr1_2:11121756-11121775 | Msa0055830:CDS | 40.0% | |
| ! | CAACAGATCTTTTCCCTGAA+AGG | - | chr1_2:11122030-11122049 | Msa0055830:CDS | 40.0% |
| GCAGGACAGTATAAATTTGG+TGG | - | chr1_2:11122152-11122171 | Msa0055830:CDS | 40.0% | |
| AACACACCTAAAATCCCAAC+TGG | + | chr1_2:11122272-11122291 | None:intergenic | 40.0% | |
| !!! | GGTGTGTTACTTTTGTTTGC+TGG | - | chr1_2:11122284-11122303 | Msa0055830:intron | 40.0% |
| !! | AAGTGCTGCTCTTGGATTTT+TGG | - | chr1_2:11122397-11122416 | Msa0055830:intron | 40.0% |
| TGGTTCCATATGGTAGAAAG+TGG | + | chr1_2:11122476-11122495 | None:intergenic | 40.0% | |
| !!! | TGGACTTTTCTGGTTCCATA+TGG | + | chr1_2:11122486-11122505 | None:intergenic | 40.0% |
| ! | GTTTGAAACTTGTGGCTGAA+TGG | + | chr1_2:11121029-11121048 | None:intergenic | 40.0% |
| !! | GCTGAAATTAATGGTGCCAT+GGG | - | chr1_2:11121102-11121121 | Msa0055830:CDS | 40.0% |
| ATATGTACCAAGATCACCCA+TGG | + | chr1_2:11121121-11121140 | None:intergenic | 40.0% | |
| ! | TGAAAATCAATGTGGTGCCA+AGG | + | chr1_2:11121185-11121204 | None:intergenic | 40.0% |
| !!! | GGCACCACATTGATTTTCAA+CGG | - | chr1_2:11121186-11121205 | Msa0055830:CDS | 40.0% |
| ATTCATGTCCGGAATCTTTC+AGG | - | chr1_2:11121294-11121313 | Msa0055830:CDS | 40.0% | |
| TGTAGACACCTGAAAGATTC+CGG | + | chr1_2:11121305-11121324 | None:intergenic | 40.0% | |
| GCCGAAATCTTTGTCTGATA+AGG | + | chr1_2:11121397-11121416 | None:intergenic | 40.0% | |
| ATTCCAGCTGTCATTATCTC+TGG | + | chr1_2:11121423-11121442 | None:intergenic | 40.0% | |
| ATTCCCCTCACAACAGATAA+AGG | + | chr1_2:11121513-11121532 | None:intergenic | 40.0% | |
| AATCTTTAGGCCAAAGACCT+TGG | - | chr1_2:11121610-11121629 | Msa0055830:CDS | 40.0% | |
| CTAAACCAAACCAAGGTCTT+TGG | + | chr1_2:11121623-11121642 | None:intergenic | 40.0% | |
| !! | AGACCTTGGTTTGGTTTAGA+TGG | - | chr1_2:11121624-11121643 | Msa0055830:CDS | 40.0% |
| !! | CGCAACAACCACTATTTTTC+TGG | + | chr1_2:11121704-11121723 | None:intergenic | 40.0% |
| CCATCCAAATTACCATCTTC+CGG | + | chr1_2:11121732-11121751 | None:intergenic | 40.0% | |
| ATTCAAAGGAGTGATGAAGG+TGG | - | chr1_2:11121756-11121775 | Msa0055830:CDS | 40.0% | |
| ! | CAACAGATCTTTTCCCTGAA+AGG | - | chr1_2:11122030-11122049 | Msa0055830:CDS | 40.0% |
| GCAGGACAGTATAAATTTGG+TGG | - | chr1_2:11122152-11122171 | Msa0055830:CDS | 40.0% | |
| AACACACCTAAAATCCCAAC+TGG | + | chr1_2:11122272-11122291 | None:intergenic | 40.0% | |
| !!! | GGTGTGTTACTTTTGTTTGC+TGG | - | chr1_2:11122284-11122303 | Msa0055830:intron | 40.0% |
| !! | AAGTGCTGCTCTTGGATTTT+TGG | - | chr1_2:11122397-11122416 | Msa0055830:intron | 40.0% |
| TGGTTCCATATGGTAGAAAG+TGG | + | chr1_2:11122476-11122495 | None:intergenic | 40.0% | |
| !!! | TGGACTTTTCTGGTTCCATA+TGG | + | chr1_2:11122486-11122505 | None:intergenic | 40.0% |
| GGAGTGATTTCATGAGCTTC+TGG | + | chr1_2:11120991-11121010 | None:intergenic | 45.0% | |
| !! | GAATGGTTTGTTGGAGGTGT+TGG | + | chr1_2:11121012-11121031 | None:intergenic | 45.0% |
| ! | CTTGTGGCTGAATGGTTTGT+TGG | + | chr1_2:11121021-11121040 | None:intergenic | 45.0% |
| AGTGTCTGCACTGCATCTTT+GGG | + | chr1_2:11121051-11121070 | None:intergenic | 45.0% | |
| ! | GGCTGAAATTAATGGTGCCA+TGG | - | chr1_2:11121101-11121120 | Msa0055830:CDS | 45.0% |
| AGAGTGAGAGCCAAGACTAT+AGG | + | chr1_2:11121147-11121166 | None:intergenic | 45.0% | |
| GGTGTCTACAACATCATCAC+TGG | - | chr1_2:11121315-11121334 | Msa0055830:CDS | 45.0% | |
| ! | ATTGACTTCATGGGCTGAAC+AGG | + | chr1_2:11121363-11121382 | None:intergenic | 45.0% |
| ATCTTTGTCTGATAAGGCCG+CGG | + | chr1_2:11121391-11121410 | None:intergenic | 45.0% | |
| ATGACAGCTGGAATCTTGAC+CGG | - | chr1_2:11121429-11121448 | Msa0055830:CDS | 45.0% | |
| CTCTTTGTTCTCGGTATCAC+AGG | - | chr1_2:11121459-11121478 | Msa0055830:CDS | 45.0% | |
| TATCACAGGATTGATGCAGC+TGG | - | chr1_2:11121473-11121492 | Msa0055830:CDS | 45.0% | |
| AGGGGAATTCAACTAGCACA+AGG | - | chr1_2:11121525-11121544 | Msa0055830:CDS | 45.0% | |
| TTAGGCCAAAGACCTTGGTT+TGG | - | chr1_2:11121615-11121634 | Msa0055830:CDS | 45.0% | |
| TGCTCCGGAAGATGGTAATT+TGG | - | chr1_2:11121725-11121744 | Msa0055830:CDS | 45.0% | |
| CCGGAAGATGGTAATTTGGA+TGG | - | chr1_2:11121729-11121748 | Msa0055830:CDS | 45.0% | |
| ! | AAATTTGGTGGAAGGAGTGG+AGG | - | chr1_2:11122164-11122183 | Msa0055830:CDS | 45.0% |
| ! | AATTTGGTGGAAGGAGTGGA+GGG | - | chr1_2:11122165-11122184 | Msa0055830:CDS | 45.0% |
| !! | TGCACTGCTGTTTCATTGGT+TGG | - | chr1_2:11122371-11122390 | Msa0055830:intron | 45.0% |
| !!! | GCTGCTCTTGGATTTTTGGT+TGG | - | chr1_2:11122401-11122420 | Msa0055830:CDS | 45.0% |
| ! | TTGTCATGTGAGGACTTGCT+AGG | - | chr1_2:11122619-11122638 | Msa0055830:CDS | 45.0% |
| !! | TGTCATGTGAGGACTTGCTA+GGG | - | chr1_2:11122620-11122639 | Msa0055830:CDS | 45.0% |
| CTTGCTAGGGTTCTACTTCT+AGG | - | chr1_2:11122633-11122652 | Msa0055830:CDS | 45.0% | |
| GGAGTGATTTCATGAGCTTC+TGG | + | chr1_2:11120991-11121010 | None:intergenic | 45.0% | |
| !! | GAATGGTTTGTTGGAGGTGT+TGG | + | chr1_2:11121012-11121031 | None:intergenic | 45.0% |
| ! | CTTGTGGCTGAATGGTTTGT+TGG | + | chr1_2:11121021-11121040 | None:intergenic | 45.0% |
| AGTGTCTGCACTGCATCTTT+GGG | + | chr1_2:11121051-11121070 | None:intergenic | 45.0% | |
| ! | GGCTGAAATTAATGGTGCCA+TGG | - | chr1_2:11121101-11121120 | Msa0055830:CDS | 45.0% |
| AGAGTGAGAGCCAAGACTAT+AGG | + | chr1_2:11121147-11121166 | None:intergenic | 45.0% | |
| GGTGTCTACAACATCATCAC+TGG | - | chr1_2:11121315-11121334 | Msa0055830:CDS | 45.0% | |
| ! | ATTGACTTCATGGGCTGAAC+AGG | + | chr1_2:11121363-11121382 | None:intergenic | 45.0% |
| ATCTTTGTCTGATAAGGCCG+CGG | + | chr1_2:11121391-11121410 | None:intergenic | 45.0% | |
| ATGACAGCTGGAATCTTGAC+CGG | - | chr1_2:11121429-11121448 | Msa0055830:CDS | 45.0% | |
| CTCTTTGTTCTCGGTATCAC+AGG | - | chr1_2:11121459-11121478 | Msa0055830:CDS | 45.0% | |
| TATCACAGGATTGATGCAGC+TGG | - | chr1_2:11121473-11121492 | Msa0055830:CDS | 45.0% | |
| AGGGGAATTCAACTAGCACA+AGG | - | chr1_2:11121525-11121544 | Msa0055830:CDS | 45.0% | |
| TTAGGCCAAAGACCTTGGTT+TGG | - | chr1_2:11121615-11121634 | Msa0055830:CDS | 45.0% | |
| TGCTCCGGAAGATGGTAATT+TGG | - | chr1_2:11121725-11121744 | Msa0055830:CDS | 45.0% | |
| CCGGAAGATGGTAATTTGGA+TGG | - | chr1_2:11121729-11121748 | Msa0055830:CDS | 45.0% | |
| ! | AAATTTGGTGGAAGGAGTGG+AGG | - | chr1_2:11122164-11122183 | Msa0055830:CDS | 45.0% |
| ! | AATTTGGTGGAAGGAGTGGA+GGG | - | chr1_2:11122165-11122184 | Msa0055830:CDS | 45.0% |
| !! | TGCACTGCTGTTTCATTGGT+TGG | - | chr1_2:11122371-11122390 | Msa0055830:intron | 45.0% |
| !!! | GCTGCTCTTGGATTTTTGGT+TGG | - | chr1_2:11122401-11122420 | Msa0055830:CDS | 45.0% |
| ! | TTGTCATGTGAGGACTTGCT+AGG | - | chr1_2:11122619-11122638 | Msa0055830:CDS | 45.0% |
| !! | TGTCATGTGAGGACTTGCTA+GGG | - | chr1_2:11122620-11122639 | Msa0055830:CDS | 45.0% |
| CTTGCTAGGGTTCTACTTCT+AGG | - | chr1_2:11122633-11122652 | Msa0055830:CDS | 45.0% | |
| !! | GTGGCTGAATGGTTTGTTGG+AGG | + | chr1_2:11121018-11121037 | None:intergenic | 50.0% |
| CAGTGTCTGCACTGCATCTT+TGG | + | chr1_2:11121052-11121071 | None:intergenic | 50.0% | |
| !! | AATGGTGCCATGGGTGATCT+TGG | - | chr1_2:11121111-11121130 | Msa0055830:CDS | 50.0% |
| ! | CTTGGCTCTCACTCTAGCTA+AGG | - | chr1_2:11121152-11121171 | Msa0055830:CDS | 50.0% |
| CTAGCTAAGGACCTCAACCT+TGG | - | chr1_2:11121165-11121184 | Msa0055830:CDS | 50.0% | |
| ! | TCAATGTGGTGCCAAGGTTG+AGG | + | chr1_2:11121179-11121198 | None:intergenic | 50.0% |
| ! | TTCATGGGCTGAACAGGCAT+AGG | + | chr1_2:11121357-11121376 | None:intergenic | 50.0% |
| GTGCCAGAGATAATGACAGC+TGG | - | chr1_2:11121417-11121436 | Msa0055830:CDS | 50.0% | |
| GGAGCTGGCCAGAAAAATAG+TGG | - | chr1_2:11121693-11121712 | Msa0055830:CDS | 50.0% | |
| ! | GTTGGATCAAGTGCTGCTCT+TGG | - | chr1_2:11122389-11122408 | Msa0055830:intron | 50.0% |
| !! | GTGGCTGAATGGTTTGTTGG+AGG | + | chr1_2:11121018-11121037 | None:intergenic | 50.0% |
| CAGTGTCTGCACTGCATCTT+TGG | + | chr1_2:11121052-11121071 | None:intergenic | 50.0% | |
| !! | AATGGTGCCATGGGTGATCT+TGG | - | chr1_2:11121111-11121130 | Msa0055830:CDS | 50.0% |
| ! | CTTGGCTCTCACTCTAGCTA+AGG | - | chr1_2:11121152-11121171 | Msa0055830:CDS | 50.0% |
| CTAGCTAAGGACCTCAACCT+TGG | - | chr1_2:11121165-11121184 | Msa0055830:CDS | 50.0% | |
| ! | TCAATGTGGTGCCAAGGTTG+AGG | + | chr1_2:11121179-11121198 | None:intergenic | 50.0% |
| ! | TTCATGGGCTGAACAGGCAT+AGG | + | chr1_2:11121357-11121376 | None:intergenic | 50.0% |
| GTGCCAGAGATAATGACAGC+TGG | - | chr1_2:11121417-11121436 | Msa0055830:CDS | 50.0% | |
| GGAGCTGGCCAGAAAAATAG+TGG | - | chr1_2:11121693-11121712 | Msa0055830:CDS | 50.0% | |
| ! | GTTGGATCAAGTGCTGCTCT+TGG | - | chr1_2:11122389-11122408 | Msa0055830:intron | 50.0% |
| ! | GCGGCAGCGATTGACTTCAT+GGG | + | chr1_2:11121372-11121391 | None:intergenic | 55.0% |
| CATGAAGTCAATCGCTGCCG+CGG | - | chr1_2:11121371-11121390 | Msa0055830:CDS | 55.0% | |
| ACAGCTGGAATCTTGACCGG+TGG | - | chr1_2:11121432-11121451 | Msa0055830:CDS | 55.0% | |
| ! | GAGAACAAAGAGCACGCCAC+CGG | + | chr1_2:11121451-11121470 | None:intergenic | 55.0% |
| GGTGGCGTGCTCTTTGTTCT+CGG | - | chr1_2:11121450-11121469 | Msa0055830:CDS | 55.0% | |
| TAGTGGTTGTTGCGGTGCTC+CGG | - | chr1_2:11121710-11121729 | Msa0055830:CDS | 55.0% | |
| ! | GGTGCTGTGCCAACTTGTCA+TGG | - | chr1_2:11122116-11122135 | Msa0055830:CDS | 55.0% |
| GTGCCAACTTGTCATGGTGC+TGG | - | chr1_2:11122122-11122141 | Msa0055830:CDS | 55.0% | |
| CCACCAGCACCATGACAAGT+TGG | + | chr1_2:11122128-11122147 | None:intergenic | 55.0% | |
| ! | CCAACTTGTCATGGTGCTGG+TGG | - | chr1_2:11122125-11122144 | Msa0055830:CDS | 55.0% |
| ! | GGAGGGTGTGTTGCACTTCT+TGG | - | chr1_2:11122182-11122201 | Msa0055830:CDS | 55.0% |
| ! | GCGGCAGCGATTGACTTCAT+GGG | + | chr1_2:11121372-11121391 | None:intergenic | 55.0% |
| CATGAAGTCAATCGCTGCCG+CGG | - | chr1_2:11121371-11121390 | Msa0055830:CDS | 55.0% | |
| ACAGCTGGAATCTTGACCGG+TGG | - | chr1_2:11121432-11121451 | Msa0055830:CDS | 55.0% | |
| ! | GAGAACAAAGAGCACGCCAC+CGG | + | chr1_2:11121451-11121470 | None:intergenic | 55.0% |
| GGTGGCGTGCTCTTTGTTCT+CGG | - | chr1_2:11121450-11121469 | Msa0055830:CDS | 55.0% | |
| TAGTGGTTGTTGCGGTGCTC+CGG | - | chr1_2:11121710-11121729 | Msa0055830:CDS | 55.0% | |
| ! | GGTGCTGTGCCAACTTGTCA+TGG | - | chr1_2:11122116-11122135 | Msa0055830:CDS | 55.0% |
| GTGCCAACTTGTCATGGTGC+TGG | - | chr1_2:11122122-11122141 | Msa0055830:CDS | 55.0% | |
| CCACCAGCACCATGACAAGT+TGG | + | chr1_2:11122128-11122147 | None:intergenic | 55.0% | |
| ! | CCAACTTGTCATGGTGCTGG+TGG | - | chr1_2:11122125-11122144 | Msa0055830:CDS | 55.0% |
| ! | GGAGGGTGTGTTGCACTTCT+TGG | - | chr1_2:11122182-11122201 | Msa0055830:CDS | 55.0% |
| ! | CGCGGCAGCGATTGACTTCA+TGG | + | chr1_2:11121373-11121392 | None:intergenic | 60.0% |
| TGTTGCGGTGCTCCGGAAGA+TGG | - | chr1_2:11121717-11121736 | Msa0055830:CDS | 60.0% | |
| !! | CATGGTGCTGGTGGACTAGC+AGG | - | chr1_2:11122134-11122153 | Msa0055830:CDS | 60.0% |
| ! | CGCGGCAGCGATTGACTTCA+TGG | + | chr1_2:11121373-11121392 | None:intergenic | 60.0% |
| TGTTGCGGTGCTCCGGAAGA+TGG | - | chr1_2:11121717-11121736 | Msa0055830:CDS | 60.0% | |
| !! | CATGGTGCTGGTGGACTAGC+AGG | - | chr1_2:11122134-11122153 | Msa0055830:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 11120829 | 11122776 | 11120829 | ID=Msa0055830;Name=Msa0055830 |
| chr1_2 | mRNA | 11120829 | 11122776 | 11120829 | ID=Msa0055830-mRNA-1;Parent=Msa0055830;Name=Msa0055830-mRNA-1;_AED=0.03;_eAED=0.03;_QI=120|1|1|1|1|1|2|265|484 |
| chr1_2 | exon | 11120829 | 11122289 | 11120829 | ID=Msa0055830-mRNA-1:exon:4252;Parent=Msa0055830-mRNA-1 |
| chr1_2 | exon | 11122398 | 11122776 | 11122398 | ID=Msa0055830-mRNA-1:exon:4251;Parent=Msa0055830-mRNA-1 |
| chr1_2 | five_prime_UTR | 11122657 | 11122776 | 11122657 | ID=Msa0055830-mRNA-1:five_prime_utr;Parent=Msa0055830-mRNA-1 |
| chr1_2 | CDS | 11122398 | 11122656 | 11122398 | ID=Msa0055830-mRNA-1:cds;Parent=Msa0055830-mRNA-1 |
| chr1_2 | CDS | 11121094 | 11122289 | 11121094 | ID=Msa0055830-mRNA-1:cds;Parent=Msa0055830-mRNA-1 |
| chr1_2 | three_prime_UTR | 11120829 | 11121093 | 11120829 | ID=Msa0055830-mRNA-1:three_prime_utr;Parent=Msa0055830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
