AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0120160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120160 MtrunA17_Chr1g0178341 95.213 188 9 0 3 190 4 191 3.09e-131 365
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120160 AT2G36145.1 62.162 148 50 3 46 190 41 185 2.38e-56 176

Find 95 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGTTATCTTGTTGGAAAT+TGG 0.165195 1_3:+44806664 Msa0120160:three_prime_UTR
ATTCGATTCCCTGCTCTTTC+AGG 0.177129 1_3:+44805144 Msa0120160:CDS
CATAAGGCTCCTCATGATTC+TGG 0.186944 1_3:-44806391 None:intergenic
TCAAAATACAAAGATTGTTT+TGG 0.243300 1_3:-44806607 None:intergenic
GTAGCTTCCCGCGGAAGCTT+TGG 0.275230 1_3:-44805053 None:intergenic
CTTCTGCCTAATGTACTTGC+AGG 0.280088 1_3:+44806469 Msa0120160:three_prime_UTR
TAGCTTCCCGCGGAAGCTTT+GGG 0.303187 1_3:-44805052 None:intergenic
TGTCTGGTCGCTTGGAAAAC+TGG 0.306117 1_3:-44806333 None:intergenic
AGATAATGCTTCATCTGTTC+AGG 0.308516 1_3:-44804767 None:intergenic
TCCCTTCTCCTACACAAGTA+TGG 0.324322 1_3:-44804847 None:intergenic
ATCTTTCATGCGCCCATGTC+TGG 0.333077 1_3:-44806349 None:intergenic
TAGAATGAAAGTTATCTTGT+TGG 0.343400 1_3:+44806657 Msa0120160:three_prime_UTR
TACCCGGTGGAGCAAGATTA+GGG 0.365827 1_3:+44806235 Msa0120160:CDS
CAGAATCATGAGGAGCCTTA+TGG 0.369861 1_3:+44806392 Msa0120160:CDS
GATTAGGGTTTATAGACATT+GGG 0.375229 1_3:+44806250 Msa0120160:CDS
TCTTGTGTATATTGACTGTT+TGG 0.377674 1_3:+44806284 Msa0120160:CDS
TGGCGGTAAGTGGTAGTATA+AGG 0.398680 1_3:+44804876 Msa0120160:CDS
ACTGGAGGAGAACTTTCATT+TGG 0.403885 1_3:-44806315 None:intergenic
TACTACAAGTGAGTTATGAT+TGG 0.404231 1_3:+44806561 Msa0120160:three_prime_UTR
TGCGCCCATGTCTGGTCGCT+TGG 0.407246 1_3:-44806341 None:intergenic
CGACGACGATGGAGTCTCTC+TGG 0.408665 1_3:+44805084 Msa0120160:CDS
ATACCCGGTGGAGCAAGATT+AGG 0.409412 1_3:+44806234 Msa0120160:CDS
GTGGGCAAACAGCCTTTGCC+AGG 0.419823 1_3:+44805376 Msa0120160:intron
AGTGTGCAGCTGAGAGGAAC+AGG 0.423390 1_3:+44804917 Msa0120160:CDS
ATAAGGCTCCTCATGATTCT+GGG 0.426970 1_3:-44806390 None:intergenic
TATGTTGACAGGCAGCTTCA+TGG 0.433103 1_3:-44805110 None:intergenic
AGGAAGCGGCTGCGAAGCAC+GGG 0.455528 1_3:-44805013 None:intergenic
AGATTAGGGTTTATAGACAT+TGG 0.474730 1_3:+44806249 Msa0120160:CDS
CTCTGAAGGTCTATGTTGAC+AGG 0.491476 1_3:-44805121 None:intergenic
GAGAATGGTGGGTGGTATTG+TGG 0.491715 1_3:-44804991 None:intergenic
TCAGGTTTACGTGGAACAAA+TGG 0.491897 1_3:-44804749 None:intergenic
AAACCCTAATCTTGCTCCAC+CGG 0.495626 1_3:-44806238 None:intergenic
GGCTGCGAAGCACGGGAGAA+TGG 0.496064 1_3:-44805006 None:intergenic
ACTACAAGTGAGTTATGATT+GGG 0.496582 1_3:+44806562 Msa0120160:three_prime_UTR
AAACACCCTGCAAGTACATT+AGG 0.502706 1_3:-44806475 None:intergenic
ATATATATACCTGAAAGAGC+AGG 0.507742 1_3:-44805153 None:intergenic
TATTGTGGTAATTAGAAATG+AGG 0.516080 1_3:-44804976 None:intergenic
CTCATGATTCTGGGCTCACC+CGG 0.516530 1_3:-44806381 None:intergenic
TCGCAGCCGCTTCCTTCTCA+CGG 0.523013 1_3:+44805021 Msa0120160:CDS
GCTGAGAAGGCAGAGGAACA+TGG 0.523707 1_3:-44804949 None:intergenic
GCGAAGCACGGGAGAATGGT+GGG 0.526904 1_3:-44805002 None:intergenic
AAGGAAGCGGCTGCGAAGCA+CGG 0.528983 1_3:-44805014 None:intergenic
AAAGTGGTAGACTGGCTCCC+TGG 0.531601 1_3:-44805394 None:intergenic
ACTTCTGAAGAGCTTCCATA+AGG 0.531730 1_3:-44806407 None:intergenic
GAGACTCCATCGTCGTCGGT+GGG 0.532066 1_3:-44805079 None:intergenic
CATGAAAGATAAGGTGCCGC+CGG 0.533196 1_3:+44806362 Msa0120160:CDS
AGGCGTGGAAAGTGGTAGAC+TGG 0.536072 1_3:-44805402 None:intergenic
TTCTGCCTAATGTACTTGCA+GGG 0.538754 1_3:+44806470 Msa0120160:three_prime_UTR
GAAATGAGGGAGTGCTGAGA+AGG 0.539560 1_3:-44804962 None:intergenic
GTAGACTGGCTCCCTGGCAA+AGG 0.542128 1_3:-44805388 None:intergenic
TGGGTGCCGCCACCGTGAGA+AGG 0.542868 1_3:-44805033 None:intergenic
ATTGTGGTAATTAGAAATGA+GGG 0.543828 1_3:-44804975 None:intergenic
CATAACTAATGTTGTATATG+TGG 0.547143 1_3:+44806631 Msa0120160:three_prime_UTR
GGGAAAGGCATGGCGGTAAG+TGG 0.549700 1_3:+44804866 Msa0120160:exon
AGAGACTCCATCGTCGTCGG+TGG 0.551810 1_3:-44805080 None:intergenic
CACCATACTTGTGTAGGAGA+AGG 0.552080 1_3:+44804845 Msa0120160:five_prime_UTR
GTTCAGATTGCCTCATTGTG+AGG 0.553621 1_3:+44806432 Msa0120160:CDS
ACCACTTTCCACGCCTCTCA+AGG 0.558258 1_3:+44805409 Msa0120160:CDS
AACCCTAATCTTGCTCCACC+GGG 0.559641 1_3:-44806237 None:intergenic
GGCGGCACCCAAAGCTTCCG+CGG 0.560842 1_3:+44805045 Msa0120160:CDS
ATGAAAGATAAGGTGCCGCC+GGG 0.567047 1_3:+44806363 Msa0120160:CDS
ACCTTGAGAGGCGTGGAAAG+TGG 0.572117 1_3:-44805410 None:intergenic
AGGGAGTGCTGAGAAGGCAG+AGG 0.573573 1_3:-44804956 None:intergenic
CCGCCACCGTGAGAAGGAAG+CGG 0.575152 1_3:-44805027 None:intergenic
CCGCTTCCTTCTCACGGTGG+CGG 0.575992 1_3:+44805027 Msa0120160:CDS
TGCGAAGCACGGGAGAATGG+TGG 0.579170 1_3:-44805003 None:intergenic
GCGGCACCCAAAGCTTCCGC+GGG 0.582964 1_3:+44805046 Msa0120160:CDS
ACATGGGCGCATGAAAGATA+AGG 0.585008 1_3:+44806353 Msa0120160:CDS
ACCATACTTGTGTAGGAGAA+GGG 0.586181 1_3:+44804846 Msa0120160:five_prime_UTR
ATTAGGGTTTATAGACATTG+GGG 0.590232 1_3:+44806251 Msa0120160:CDS
CTGAGAAGGCAGAGGAACAT+GGG 0.590908 1_3:-44804948 None:intergenic
TTATATATGTGTACCTTGAG+AGG 0.592519 1_3:-44805422 None:intergenic
GACGACGATGGAGTCTCTCT+GGG 0.598218 1_3:+44805085 Msa0120160:CDS
TGGGCAAACAGCCTTTGCCA+GGG 0.603588 1_3:+44805377 Msa0120160:CDS
AGACTCCATCGTCGTCGGTG+GGG 0.604451 1_3:-44805078 None:intergenic
CTGCAAGTACATTAGGCAGA+AGG 0.607099 1_3:-44806468 None:intergenic
TATATATACCTGAAAGAGCA+GGG 0.607634 1_3:-44805152 None:intergenic
CAGAGAGACTCCATCGTCGT+CGG 0.615294 1_3:-44805083 None:intergenic
AAACAGGTTGACAAAATACC+CGG 0.616364 1_3:+44806219 Msa0120160:intron
GCTACACACCATACTTGTGT+AGG 0.621822 1_3:+44804839 Msa0120160:five_prime_UTR
GCAGGGAATCGAATCTCTGA+AGG 0.624992 1_3:-44805135 None:intergenic
TACAGCCCCACCGACGACGA+TGG 0.636039 1_3:+44805073 Msa0120160:CDS
TGTAGGAGAAGGGAAAGGCA+TGG 0.654222 1_3:+44804856 Msa0120160:exon
TTCATCTGTTCAGGTTTACG+TGG 0.657420 1_3:-44804758 None:intergenic
GGTGGGGCTGTAGCTTCCCG+CGG 0.664372 1_3:-44805062 None:intergenic
CTGGTCGCTTGGAAAACTGG+AGG 0.670468 1_3:-44806330 None:intergenic
ACTTGTGTAGGAGAAGGGAA+AGG 0.684749 1_3:+44804851 Msa0120160:five_prime_UTR
TATGTGTACCTTGAGAGGCG+TGG 0.685226 1_3:-44805417 None:intergenic
ATGATTCTGGGCTCACCCGG+CGG 0.687233 1_3:-44806378 None:intergenic
TGCTTGAGTGTGCAGCTGAG+AGG 0.688346 1_3:+44804911 Msa0120160:CDS
CGGGTGAGCCCAGAATCATG+AGG 0.694987 1_3:+44806382 Msa0120160:CDS
CAGCCGCTTCCTTCTCACGG+TGG 0.696158 1_3:+44805024 Msa0120160:CDS
CAGGTTGACAAAATACCCGG+TGG 0.732626 1_3:+44806222 Msa0120160:intron
AAGCACGGGAGAATGGTGGG+TGG 0.747034 1_3:-44804999 None:intergenic
AGGAGAAGGGAAAGGCATGG+CGG 0.759081 1_3:+44804859 Msa0120160:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATTTCGAGTAA+AGG - chr1_3:44804797-44804816 None:intergenic 15.0%
!! TATATTATACTACTATGTTT+AGG + chr1_3:44805171-44805190 Msa0120160:intron 15.0%
!! GTTAAATATAAGAATAATGT+TGG - chr1_3:44805287-44805306 None:intergenic 15.0%
!! ATAATTTAAATTCTCTAACT+AGG - chr1_3:44805676-44805695 None:intergenic 15.0%
!! TAGAGAATTTAAATTATAGT+TGG + chr1_3:44805679-44805698 Msa0120160:intron 15.0%
!!! ATTTATTTTATTTCGAGTAA+AGG - chr1_3:44804797-44804816 None:intergenic 15.0%
!! TATATTATACTACTATGTTT+AGG + chr1_3:44805171-44805190 Msa0120160:intron 15.0%
!! GTTAAATATAAGAATAATGT+TGG - chr1_3:44805287-44805306 None:intergenic 15.0%
!! ATAATTTAAATTCTCTAACT+AGG - chr1_3:44805676-44805695 None:intergenic 15.0%
!! TAGAGAATTTAAATTATAGT+TGG + chr1_3:44805679-44805698 Msa0120160:intron 15.0%
!! ATATAAGAATAATGTTGGTA+AGG - chr1_3:44805282-44805301 None:intergenic 20.0%
!!! CAATTTCAAGTTAAACTAAT+AGG - chr1_3:44805492-44805511 None:intergenic 20.0%
!!! ATTACTTCTAGCTTTATTTA+AGG + chr1_3:44805526-44805545 Msa0120160:intron 20.0%
!!! TAACACTGTGTTTTAAATAA+CGG + chr1_3:44805702-44805721 Msa0120160:intron 20.0%
!! TCATTTCAATTTGATAAAAC+AGG + chr1_3:44806203-44806222 Msa0120160:intron 20.0%
!!! CAAAATACAAAGATTGTTTT+GGG - chr1_3:44806609-44806628 None:intergenic 20.0%
!!! TCAAAATACAAAGATTGTTT+TGG - chr1_3:44806610-44806629 None:intergenic 20.0%
!! ATATAAGAATAATGTTGGTA+AGG - chr1_3:44805282-44805301 None:intergenic 20.0%
!!! CAATTTCAAGTTAAACTAAT+AGG - chr1_3:44805492-44805511 None:intergenic 20.0%
!!! ATTACTTCTAGCTTTATTTA+AGG + chr1_3:44805526-44805545 Msa0120160:intron 20.0%
!!! TAACACTGTGTTTTAAATAA+CGG + chr1_3:44805702-44805721 Msa0120160:intron 20.0%
!! TCATTTCAATTTGATAAAAC+AGG + chr1_3:44806203-44806222 Msa0120160:intron 20.0%
!!! CAAAATACAAAGATTGTTTT+GGG - chr1_3:44806609-44806628 None:intergenic 20.0%
!!! TCAAAATACAAAGATTGTTT+TGG - chr1_3:44806610-44806629 None:intergenic 20.0%
!!! ATTTTATTTCGAGTAAAGGT+AGG - chr1_3:44804793-44804812 None:intergenic 25.0%
! ATTGTGGTAATTAGAAATGA+GGG - chr1_3:44804978-44804997 None:intergenic 25.0%
! TATTGTGGTAATTAGAAATG+AGG - chr1_3:44804979-44804998 None:intergenic 25.0%
!! ATTATAAGTTTGTTCGTCAA+TGG - chr1_3:44805343-44805362 None:intergenic 25.0%
!! CAAACTTATAATTTGTGTTG+TGG + chr1_3:44805351-44805370 Msa0120160:intron 25.0%
! AACAATGAAATGCATTAACA+AGG - chr1_3:44805462-44805481 None:intergenic 25.0%
! GGAACTTAAAACAAATCAAA+TGG - chr1_3:44805580-44805599 None:intergenic 25.0%
!!! CATGATAATTTTTAAGTTGC+CGG - chr1_3:44805830-44805849 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr1_3:44805969-44805988 None:intergenic 25.0%
! CATTGAATAGTTAATGTATC+TGG - chr1_3:44805934-44805953 None:intergenic 25.0%
!! TAAGCAAAAAACAGCTTTTT+AGG - chr1_3:44805959-44805978 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+TGG + chr1_3:44805969-44805988 Msa0120160:intron 25.0%
! ATTAAAAAAACCTCACAATG+AGG - chr1_3:44806445-44806464 None:intergenic 25.0%
! CATAACTAATGTTGTATATG+TGG + chr1_3:44806631-44806650 Msa0120160:three_prime_UTR 25.0%
! TAGAATGAAAGTTATCTTGT+TGG + chr1_3:44806657-44806676 Msa0120160:three_prime_UTR 25.0%
! AAAGTTATCTTGTTGGAAAT+TGG + chr1_3:44806664-44806683 Msa0120160:three_prime_UTR 25.0%
!! TTTTCACAAGTTTCATGAAT+AGG + chr1_3:44806701-44806720 Msa0120160:three_prime_UTR 25.0%
! TTTCACAAGTTTCATGAATA+GGG + chr1_3:44806702-44806721 Msa0120160:three_prime_UTR 25.0%
!!! ATTTTATTTCGAGTAAAGGT+AGG - chr1_3:44804793-44804812 None:intergenic 25.0%
! ATTGTGGTAATTAGAAATGA+GGG - chr1_3:44804978-44804997 None:intergenic 25.0%
! TATTGTGGTAATTAGAAATG+AGG - chr1_3:44804979-44804998 None:intergenic 25.0%
!! ATTATAAGTTTGTTCGTCAA+TGG - chr1_3:44805343-44805362 None:intergenic 25.0%
!! CAAACTTATAATTTGTGTTG+TGG + chr1_3:44805351-44805370 Msa0120160:intron 25.0%
! AACAATGAAATGCATTAACA+AGG - chr1_3:44805462-44805481 None:intergenic 25.0%
! GGAACTTAAAACAAATCAAA+TGG - chr1_3:44805580-44805599 None:intergenic 25.0%
!!! CATGATAATTTTTAAGTTGC+CGG - chr1_3:44805830-44805849 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr1_3:44805969-44805988 None:intergenic 25.0%
! CATTGAATAGTTAATGTATC+TGG - chr1_3:44805934-44805953 None:intergenic 25.0%
!! TAAGCAAAAAACAGCTTTTT+AGG - chr1_3:44805959-44805978 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+TGG + chr1_3:44805969-44805988 Msa0120160:intron 25.0%
! ATTAAAAAAACCTCACAATG+AGG - chr1_3:44806445-44806464 None:intergenic 25.0%
! CATAACTAATGTTGTATATG+TGG + chr1_3:44806631-44806650 Msa0120160:three_prime_UTR 25.0%
! TAGAATGAAAGTTATCTTGT+TGG + chr1_3:44806657-44806676 Msa0120160:three_prime_UTR 25.0%
! AAAGTTATCTTGTTGGAAAT+TGG + chr1_3:44806664-44806683 Msa0120160:three_prime_UTR 25.0%
TATATATACCTGAAAGAGCA+GGG - chr1_3:44805155-44805174 None:intergenic 30.0%
ATATATATACCTGAAAGAGC+AGG - chr1_3:44805156-44805175 None:intergenic 30.0%
ATGTTGAAGAAACGCAATTT+AGG - chr1_3:44805212-44805231 None:intergenic 30.0%
TTATATATGTGTACCTTGAG+AGG - chr1_3:44805425-44805444 None:intergenic 30.0%
TGAAATGCATTAACAAGGAA+CGG - chr1_3:44805457-44805476 None:intergenic 30.0%
!! TGTGTTTTAAATAACGGTCA+TGG + chr1_3:44805708-44805727 Msa0120160:intron 30.0%
TCTTATTGTAGTGTAGTGTA+GGG - chr1_3:44806031-44806050 None:intergenic 30.0%
ATCTTATTGTAGTGTAGTGT+AGG - chr1_3:44806032-44806051 None:intergenic 30.0%
TACACTACACTACAATAAGA+TGG + chr1_3:44806031-44806050 Msa0120160:intron 30.0%
AGATTAGGGTTTATAGACAT+TGG + chr1_3:44806249-44806268 Msa0120160:CDS 30.0%
GATTAGGGTTTATAGACATT+GGG + chr1_3:44806250-44806269 Msa0120160:CDS 30.0%
ATTAGGGTTTATAGACATTG+GGG + chr1_3:44806251-44806270 Msa0120160:CDS 30.0%
! TCTTGTGTATATTGACTGTT+TGG + chr1_3:44806284-44806303 Msa0120160:CDS 30.0%
TACTACAAGTGAGTTATGAT+TGG + chr1_3:44806561-44806580 Msa0120160:three_prime_UTR 30.0%
ACTACAAGTGAGTTATGATT+GGG + chr1_3:44806562-44806581 Msa0120160:three_prime_UTR 30.0%
TATATATACCTGAAAGAGCA+GGG - chr1_3:44805155-44805174 None:intergenic 30.0%
ATATATATACCTGAAAGAGC+AGG - chr1_3:44805156-44805175 None:intergenic 30.0%
ATGTTGAAGAAACGCAATTT+AGG - chr1_3:44805212-44805231 None:intergenic 30.0%
TTATATATGTGTACCTTGAG+AGG - chr1_3:44805425-44805444 None:intergenic 30.0%
TGAAATGCATTAACAAGGAA+CGG - chr1_3:44805457-44805476 None:intergenic 30.0%
!! TGTGTTTTAAATAACGGTCA+TGG + chr1_3:44805708-44805727 Msa0120160:intron 30.0%
TCTTATTGTAGTGTAGTGTA+GGG - chr1_3:44806031-44806050 None:intergenic 30.0%
ATCTTATTGTAGTGTAGTGT+AGG - chr1_3:44806032-44806051 None:intergenic 30.0%
TACACTACACTACAATAAGA+TGG + chr1_3:44806031-44806050 Msa0120160:intron 30.0%
AGATTAGGGTTTATAGACAT+TGG + chr1_3:44806249-44806268 Msa0120160:CDS 30.0%
GATTAGGGTTTATAGACATT+GGG + chr1_3:44806250-44806269 Msa0120160:CDS 30.0%
ATTAGGGTTTATAGACATTG+GGG + chr1_3:44806251-44806270 Msa0120160:CDS 30.0%
! TCTTGTGTATATTGACTGTT+TGG + chr1_3:44806284-44806303 Msa0120160:CDS 30.0%
TACTACAAGTGAGTTATGAT+TGG + chr1_3:44806561-44806580 Msa0120160:three_prime_UTR 30.0%
ACTACAAGTGAGTTATGATT+GGG + chr1_3:44806562-44806581 Msa0120160:three_prime_UTR 30.0%
AGATAATGCTTCATCTGTTC+AGG - chr1_3:44804770-44804789 None:intergenic 35.0%
! TATAATTTGTGTTGTGGCAG+TGG + chr1_3:44805357-44805376 Msa0120160:intron 35.0%
! ATAATTTGTGTTGTGGCAGT+GGG + chr1_3:44805358-44805377 Msa0120160:intron 35.0%
GAAATGCATTAACAAGGAAC+GGG - chr1_3:44805456-44805475 None:intergenic 35.0%
TTGATACTCTTAGCTTCCTA+TGG + chr1_3:44805551-44805570 Msa0120160:intron 35.0%
ACAAATCAAATGGCTACCAT+AGG - chr1_3:44805570-44805589 None:intergenic 35.0%
AGCTATCTAGCATGAACTTA+AGG - chr1_3:44805601-44805620 None:intergenic 35.0%
!! AGTTGTGATCCTTGCTATTA+TGG + chr1_3:44805747-44805766 Msa0120160:intron 35.0%
CTTGATTCTCCATAATAGCA+AGG - chr1_3:44805759-44805778 None:intergenic 35.0%
!! CTTGCTATTATGGAGAATCA+AGG + chr1_3:44805757-44805776 Msa0120160:intron 35.0%
AAATTATCATGTACTCCCTC+CGG + chr1_3:44805839-44805858 Msa0120160:intron 35.0%
TTGCTTATAAATGTGACTGG+AGG + chr1_3:44805972-44805991 Msa0120160:intron 35.0%
TGCTTATAAATGTGACTGGA+GGG + chr1_3:44805973-44805992 Msa0120160:intron 35.0%
! AGCTTTTGTGACATTGTTCT+TGG - chr1_3:44806098-44806117 None:intergenic 35.0%
! AAACAGGTTGACAAAATACC+CGG + chr1_3:44806219-44806238 Msa0120160:intron 35.0%
AGATAATGCTTCATCTGTTC+AGG - chr1_3:44804770-44804789 None:intergenic 35.0%
! TATAATTTGTGTTGTGGCAG+TGG + chr1_3:44805357-44805376 Msa0120160:intron 35.0%
! ATAATTTGTGTTGTGGCAGT+GGG + chr1_3:44805358-44805377 Msa0120160:intron 35.0%
GAAATGCATTAACAAGGAAC+GGG - chr1_3:44805456-44805475 None:intergenic 35.0%
TTGATACTCTTAGCTTCCTA+TGG + chr1_3:44805551-44805570 Msa0120160:intron 35.0%
ACAAATCAAATGGCTACCAT+AGG - chr1_3:44805570-44805589 None:intergenic 35.0%
AGCTATCTAGCATGAACTTA+AGG - chr1_3:44805601-44805620 None:intergenic 35.0%
!! AGTTGTGATCCTTGCTATTA+TGG + chr1_3:44805747-44805766 Msa0120160:intron 35.0%
CTTGATTCTCCATAATAGCA+AGG - chr1_3:44805759-44805778 None:intergenic 35.0%
!! CTTGCTATTATGGAGAATCA+AGG + chr1_3:44805757-44805776 Msa0120160:intron 35.0%
AAATTATCATGTACTCCCTC+CGG + chr1_3:44805839-44805858 Msa0120160:intron 35.0%
TTGCTTATAAATGTGACTGG+AGG + chr1_3:44805972-44805991 Msa0120160:intron 35.0%
TGCTTATAAATGTGACTGGA+GGG + chr1_3:44805973-44805992 Msa0120160:intron 35.0%
! AGCTTTTGTGACATTGTTCT+TGG - chr1_3:44806098-44806117 None:intergenic 35.0%
! AAACAGGTTGACAAAATACC+CGG + chr1_3:44806219-44806238 Msa0120160:intron 35.0%
TCAGGTTTACGTGGAACAAA+TGG - chr1_3:44804752-44804771 None:intergenic 40.0%
! TTCATCTGTTCAGGTTTACG+TGG - chr1_3:44804761-44804780 None:intergenic 40.0%
ACCATACTTGTGTAGGAGAA+GGG + chr1_3:44804846-44804865 Msa0120160:five_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr1_3:44805857-44805876 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr1_3:44805858-44805877 None:intergenic 40.0%
GGTACATACTACTTAGCTGT+AGG - chr1_3:44806077-44806096 None:intergenic 40.0%
ACTGGAGGAGAACTTTCATT+TGG - chr1_3:44806318-44806337 None:intergenic 40.0%
ATAAGGCTCCTCATGATTCT+GGG - chr1_3:44806393-44806412 None:intergenic 40.0%
! ACTTCTGAAGAGCTTCCATA+AGG - chr1_3:44806410-44806429 None:intergenic 40.0%
TTCTGCCTAATGTACTTGCA+GGG + chr1_3:44806470-44806489 Msa0120160:three_prime_UTR 40.0%
AAACACCCTGCAAGTACATT+AGG - chr1_3:44806478-44806497 None:intergenic 40.0%
TCAGGTTTACGTGGAACAAA+TGG - chr1_3:44804752-44804771 None:intergenic 40.0%
! TTCATCTGTTCAGGTTTACG+TGG - chr1_3:44804761-44804780 None:intergenic 40.0%
ACCATACTTGTGTAGGAGAA+GGG + chr1_3:44804846-44804865 Msa0120160:five_prime_UTR 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr1_3:44805857-44805876 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr1_3:44805858-44805877 None:intergenic 40.0%
GGTACATACTACTTAGCTGT+AGG - chr1_3:44806077-44806096 None:intergenic 40.0%
ACTGGAGGAGAACTTTCATT+TGG - chr1_3:44806318-44806337 None:intergenic 40.0%
ATAAGGCTCCTCATGATTCT+GGG - chr1_3:44806393-44806412 None:intergenic 40.0%
! ACTTCTGAAGAGCTTCCATA+AGG - chr1_3:44806410-44806429 None:intergenic 40.0%
TTCTGCCTAATGTACTTGCA+GGG + chr1_3:44806470-44806489 Msa0120160:three_prime_UTR 40.0%
AAACACCCTGCAAGTACATT+AGG - chr1_3:44806478-44806497 None:intergenic 40.0%
GCTACACACCATACTTGTGT+AGG + chr1_3:44804839-44804858 Msa0120160:five_prime_UTR 45.0%
CACCATACTTGTGTAGGAGA+AGG + chr1_3:44804845-44804864 Msa0120160:five_prime_UTR 45.0%
TCCCTTCTCCTACACAAGTA+TGG - chr1_3:44804850-44804869 None:intergenic 45.0%
ACTTGTGTAGGAGAAGGGAA+AGG + chr1_3:44804851-44804870 Msa0120160:five_prime_UTR 45.0%
TGGCGGTAAGTGGTAGTATA+AGG + chr1_3:44804876-44804895 Msa0120160:CDS 45.0%
TATGTTGACAGGCAGCTTCA+TGG - chr1_3:44805113-44805132 None:intergenic 45.0%
! CTCTGAAGGTCTATGTTGAC+AGG - chr1_3:44805124-44805143 None:intergenic 45.0%
ATTCGATTCCCTGCTCTTTC+AGG + chr1_3:44805144-44805163 Msa0120160:CDS 45.0%
AAACCCTAATCTTGCTCCAC+CGG - chr1_3:44806241-44806260 None:intergenic 45.0%
! TTTTCCAAGCGACCAGACAT+GGG + chr1_3:44806337-44806356 Msa0120160:CDS 45.0%
ACATGGGCGCATGAAAGATA+AGG + chr1_3:44806353-44806372 Msa0120160:CDS 45.0%
CATAAGGCTCCTCATGATTC+TGG - chr1_3:44806394-44806413 None:intergenic 45.0%
CAGAATCATGAGGAGCCTTA+TGG + chr1_3:44806392-44806411 Msa0120160:CDS 45.0%
GTTCAGATTGCCTCATTGTG+AGG + chr1_3:44806432-44806451 Msa0120160:CDS 45.0%
CTGCAAGTACATTAGGCAGA+AGG - chr1_3:44806471-44806490 None:intergenic 45.0%
CTTCTGCCTAATGTACTTGC+AGG + chr1_3:44806469-44806488 Msa0120160:three_prime_UTR 45.0%
GCTACACACCATACTTGTGT+AGG + chr1_3:44804839-44804858 Msa0120160:five_prime_UTR 45.0%
CACCATACTTGTGTAGGAGA+AGG + chr1_3:44804845-44804864 Msa0120160:five_prime_UTR 45.0%
TCCCTTCTCCTACACAAGTA+TGG - chr1_3:44804850-44804869 None:intergenic 45.0%
ACTTGTGTAGGAGAAGGGAA+AGG + chr1_3:44804851-44804870 Msa0120160:five_prime_UTR 45.0%
TGGCGGTAAGTGGTAGTATA+AGG + chr1_3:44804876-44804895 Msa0120160:CDS 45.0%
TATGTTGACAGGCAGCTTCA+TGG - chr1_3:44805113-44805132 None:intergenic 45.0%
! CTCTGAAGGTCTATGTTGAC+AGG - chr1_3:44805124-44805143 None:intergenic 45.0%
ATTCGATTCCCTGCTCTTTC+AGG + chr1_3:44805144-44805163 Msa0120160:CDS 45.0%
AAACCCTAATCTTGCTCCAC+CGG - chr1_3:44806241-44806260 None:intergenic 45.0%
! TTTTCCAAGCGACCAGACAT+GGG + chr1_3:44806337-44806356 Msa0120160:CDS 45.0%
ACATGGGCGCATGAAAGATA+AGG + chr1_3:44806353-44806372 Msa0120160:CDS 45.0%
CATAAGGCTCCTCATGATTC+TGG - chr1_3:44806394-44806413 None:intergenic 45.0%
CAGAATCATGAGGAGCCTTA+TGG + chr1_3:44806392-44806411 Msa0120160:CDS 45.0%
GTTCAGATTGCCTCATTGTG+AGG + chr1_3:44806432-44806451 Msa0120160:CDS 45.0%
CTGCAAGTACATTAGGCAGA+AGG - chr1_3:44806471-44806490 None:intergenic 45.0%
CTTCTGCCTAATGTACTTGC+AGG + chr1_3:44806469-44806488 Msa0120160:three_prime_UTR 45.0%
TGTAGGAGAAGGGAAAGGCA+TGG + chr1_3:44804856-44804875 Msa0120160:exon 50.0%
CTGAGAAGGCAGAGGAACAT+GGG - chr1_3:44804951-44804970 None:intergenic 50.0%
!! GAAATGAGGGAGTGCTGAGA+AGG - chr1_3:44804965-44804984 None:intergenic 50.0%
!! GAGAATGGTGGGTGGTATTG+TGG - chr1_3:44804994-44805013 None:intergenic 50.0%
GCAGGGAATCGAATCTCTGA+AGG - chr1_3:44805138-44805157 None:intergenic 50.0%
TATGTGTACCTTGAGAGGCG+TGG - chr1_3:44805420-44805439 None:intergenic 50.0%
TTGTAATGCCACCCCGATTG+AGG - chr1_3:44805805-44805824 None:intergenic 50.0%
TCGGGGTGGCATTACAATTC+CGG + chr1_3:44805808-44805827 Msa0120160:intron 50.0%
! CAGGTTGACAAAATACCCGG+TGG + chr1_3:44806222-44806241 Msa0120160:intron 50.0%
ATACCCGGTGGAGCAAGATT+AGG + chr1_3:44806234-44806253 Msa0120160:CDS 50.0%
TACCCGGTGGAGCAAGATTA+GGG + chr1_3:44806235-44806254 Msa0120160:CDS 50.0%
AACCCTAATCTTGCTCCACC+GGG - chr1_3:44806240-44806259 None:intergenic 50.0%
TGTCTGGTCGCTTGGAAAAC+TGG - chr1_3:44806336-44806355 None:intergenic 50.0%
! GTTTTCCAAGCGACCAGACA+TGG + chr1_3:44806336-44806355 Msa0120160:CDS 50.0%
ATCTTTCATGCGCCCATGTC+TGG - chr1_3:44806352-44806371 None:intergenic 50.0%
!! CATGAAAGATAAGGTGCCGC+CGG + chr1_3:44806362-44806381 Msa0120160:CDS 50.0%
!! ATGAAAGATAAGGTGCCGCC+GGG + chr1_3:44806363-44806382 Msa0120160:CDS 50.0%
TGTAGGAGAAGGGAAAGGCA+TGG + chr1_3:44804856-44804875 Msa0120160:exon 50.0%
CTGAGAAGGCAGAGGAACAT+GGG - chr1_3:44804951-44804970 None:intergenic 50.0%
!! GAAATGAGGGAGTGCTGAGA+AGG - chr1_3:44804965-44804984 None:intergenic 50.0%
!! GAGAATGGTGGGTGGTATTG+TGG - chr1_3:44804994-44805013 None:intergenic 50.0%
GCAGGGAATCGAATCTCTGA+AGG - chr1_3:44805138-44805157 None:intergenic 50.0%
TATGTGTACCTTGAGAGGCG+TGG - chr1_3:44805420-44805439 None:intergenic 50.0%
TTGTAATGCCACCCCGATTG+AGG - chr1_3:44805805-44805824 None:intergenic 50.0%
TCGGGGTGGCATTACAATTC+CGG + chr1_3:44805808-44805827 Msa0120160:intron 50.0%
! CAGGTTGACAAAATACCCGG+TGG + chr1_3:44806222-44806241 Msa0120160:intron 50.0%
ATACCCGGTGGAGCAAGATT+AGG + chr1_3:44806234-44806253 Msa0120160:CDS 50.0%
TACCCGGTGGAGCAAGATTA+GGG + chr1_3:44806235-44806254 Msa0120160:CDS 50.0%
AACCCTAATCTTGCTCCACC+GGG - chr1_3:44806240-44806259 None:intergenic 50.0%
TGTCTGGTCGCTTGGAAAAC+TGG - chr1_3:44806336-44806355 None:intergenic 50.0%
! GTTTTCCAAGCGACCAGACA+TGG + chr1_3:44806336-44806355 Msa0120160:CDS 50.0%
ATCTTTCATGCGCCCATGTC+TGG - chr1_3:44806352-44806371 None:intergenic 50.0%
!! CATGAAAGATAAGGTGCCGC+CGG + chr1_3:44806362-44806381 Msa0120160:CDS 50.0%
!! ATGAAAGATAAGGTGCCGCC+GGG + chr1_3:44806363-44806382 Msa0120160:CDS 50.0%
! AGGAGAAGGGAAAGGCATGG+CGG + chr1_3:44804859-44804878 Msa0120160:exon 55.0%
TGCTTGAGTGTGCAGCTGAG+AGG + chr1_3:44804911-44804930 Msa0120160:CDS 55.0%
AGTGTGCAGCTGAGAGGAAC+AGG + chr1_3:44804917-44804936 Msa0120160:CDS 55.0%
GCTGAGAAGGCAGAGGAACA+TGG - chr1_3:44804952-44804971 None:intergenic 55.0%
TAGCTTCCCGCGGAAGCTTT+GGG - chr1_3:44805055-44805074 None:intergenic 55.0%
CAGAGAGACTCCATCGTCGT+CGG - chr1_3:44805086-44805105 None:intergenic 55.0%
GACGACGATGGAGTCTCTCT+GGG + chr1_3:44805085-44805104 Msa0120160:CDS 55.0%
TGGGCAAACAGCCTTTGCCA+GGG + chr1_3:44805377-44805396 Msa0120160:CDS 55.0%
! AAAGTGGTAGACTGGCTCCC+TGG - chr1_3:44805397-44805416 None:intergenic 55.0%
AGGCGTGGAAAGTGGTAGAC+TGG - chr1_3:44805405-44805424 None:intergenic 55.0%
ACCACTTTCCACGCCTCTCA+AGG + chr1_3:44805409-44805428 Msa0120160:CDS 55.0%
! ACCTTGAGAGGCGTGGAAAG+TGG - chr1_3:44805413-44805432 None:intergenic 55.0%
GCAGCCAATGCAGCCTCAAT+CGG + chr1_3:44805789-44805808 Msa0120160:intron 55.0%
CAGCCAATGCAGCCTCAATC+GGG + chr1_3:44805790-44805809 Msa0120160:intron 55.0%
AGCCAATGCAGCCTCAATCG+GGG + chr1_3:44805791-44805810 Msa0120160:intron 55.0%
CTGGTCGCTTGGAAAACTGG+AGG - chr1_3:44806333-44806352 None:intergenic 55.0%
CTCATGATTCTGGGCTCACC+CGG - chr1_3:44806384-44806403 None:intergenic 55.0%
! AGGAGAAGGGAAAGGCATGG+CGG + chr1_3:44804859-44804878 Msa0120160:exon 55.0%
TGCTTGAGTGTGCAGCTGAG+AGG + chr1_3:44804911-44804930 Msa0120160:CDS 55.0%
AGTGTGCAGCTGAGAGGAAC+AGG + chr1_3:44804917-44804936 Msa0120160:CDS 55.0%
GCTGAGAAGGCAGAGGAACA+TGG - chr1_3:44804952-44804971 None:intergenic 55.0%
TAGCTTCCCGCGGAAGCTTT+GGG - chr1_3:44805055-44805074 None:intergenic 55.0%
CAGAGAGACTCCATCGTCGT+CGG - chr1_3:44805086-44805105 None:intergenic 55.0%
GACGACGATGGAGTCTCTCT+GGG + chr1_3:44805085-44805104 Msa0120160:CDS 55.0%
TGGGCAAACAGCCTTTGCCA+GGG + chr1_3:44805377-44805396 Msa0120160:CDS 55.0%
! AAAGTGGTAGACTGGCTCCC+TGG - chr1_3:44805397-44805416 None:intergenic 55.0%
AGGCGTGGAAAGTGGTAGAC+TGG - chr1_3:44805405-44805424 None:intergenic 55.0%
ACCACTTTCCACGCCTCTCA+AGG + chr1_3:44805409-44805428 Msa0120160:CDS 55.0%
! ACCTTGAGAGGCGTGGAAAG+TGG - chr1_3:44805413-44805432 None:intergenic 55.0%
GCAGCCAATGCAGCCTCAAT+CGG + chr1_3:44805789-44805808 Msa0120160:intron 55.0%
CAGCCAATGCAGCCTCAATC+GGG + chr1_3:44805790-44805809 Msa0120160:intron 55.0%
AGCCAATGCAGCCTCAATCG+GGG + chr1_3:44805791-44805810 Msa0120160:intron 55.0%
CTGGTCGCTTGGAAAACTGG+AGG - chr1_3:44806333-44806352 None:intergenic 55.0%
CTCATGATTCTGGGCTCACC+CGG - chr1_3:44806384-44806403 None:intergenic 55.0%
! GGGAAAGGCATGGCGGTAAG+TGG + chr1_3:44804866-44804885 Msa0120160:exon 60.0%
!! AGGGAGTGCTGAGAAGGCAG+AGG - chr1_3:44804959-44804978 None:intergenic 60.0%
! AAGCACGGGAGAATGGTGGG+TGG - chr1_3:44805002-44805021 None:intergenic 60.0%
GCGAAGCACGGGAGAATGGT+GGG - chr1_3:44805005-44805024 None:intergenic 60.0%
TGCGAAGCACGGGAGAATGG+TGG - chr1_3:44805006-44805025 None:intergenic 60.0%
AAGGAAGCGGCTGCGAAGCA+CGG - chr1_3:44805017-44805036 None:intergenic 60.0%
TCGCAGCCGCTTCCTTCTCA+CGG + chr1_3:44805021-44805040 Msa0120160:CDS 60.0%
GTAGCTTCCCGCGGAAGCTT+TGG - chr1_3:44805056-44805075 None:intergenic 60.0%
AGACTCCATCGTCGTCGGTG+GGG - chr1_3:44805081-44805100 None:intergenic 60.0%
GAGACTCCATCGTCGTCGGT+GGG - chr1_3:44805082-44805101 None:intergenic 60.0%
AGAGACTCCATCGTCGTCGG+TGG - chr1_3:44805083-44805102 None:intergenic 60.0%
CGACGACGATGGAGTCTCTC+TGG + chr1_3:44805084-44805103 Msa0120160:CDS 60.0%
GTGGGCAAACAGCCTTTGCC+AGG + chr1_3:44805376-44805395 Msa0120160:intron 60.0%
! GTAGACTGGCTCCCTGGCAA+AGG - chr1_3:44805391-44805410 None:intergenic 60.0%
CACCCCGATTGAGGCTGCAT+TGG - chr1_3:44805796-44805815 None:intergenic 60.0%
CAATGCAGCCTCAATCGGGG+TGG + chr1_3:44805794-44805813 Msa0120160:intron 60.0%
ATGATTCTGGGCTCACCCGG+CGG - chr1_3:44806381-44806400 None:intergenic 60.0%
CGGGTGAGCCCAGAATCATG+AGG + chr1_3:44806382-44806401 Msa0120160:CDS 60.0%
! GGGAAAGGCATGGCGGTAAG+TGG + chr1_3:44804866-44804885 Msa0120160:exon 60.0%
!! AGGGAGTGCTGAGAAGGCAG+AGG - chr1_3:44804959-44804978 None:intergenic 60.0%
! AAGCACGGGAGAATGGTGGG+TGG - chr1_3:44805002-44805021 None:intergenic 60.0%
GCGAAGCACGGGAGAATGGT+GGG - chr1_3:44805005-44805024 None:intergenic 60.0%
TGCGAAGCACGGGAGAATGG+TGG - chr1_3:44805006-44805025 None:intergenic 60.0%
AAGGAAGCGGCTGCGAAGCA+CGG - chr1_3:44805017-44805036 None:intergenic 60.0%
TCGCAGCCGCTTCCTTCTCA+CGG + chr1_3:44805021-44805040 Msa0120160:CDS 60.0%
GTAGCTTCCCGCGGAAGCTT+TGG - chr1_3:44805056-44805075 None:intergenic 60.0%
AGACTCCATCGTCGTCGGTG+GGG - chr1_3:44805081-44805100 None:intergenic 60.0%
GAGACTCCATCGTCGTCGGT+GGG - chr1_3:44805082-44805101 None:intergenic 60.0%
AGAGACTCCATCGTCGTCGG+TGG - chr1_3:44805083-44805102 None:intergenic 60.0%
CGACGACGATGGAGTCTCTC+TGG + chr1_3:44805084-44805103 Msa0120160:CDS 60.0%
GTGGGCAAACAGCCTTTGCC+AGG + chr1_3:44805376-44805395 Msa0120160:intron 60.0%
! GTAGACTGGCTCCCTGGCAA+AGG - chr1_3:44805391-44805410 None:intergenic 60.0%
CACCCCGATTGAGGCTGCAT+TGG - chr1_3:44805796-44805815 None:intergenic 60.0%
CAATGCAGCCTCAATCGGGG+TGG + chr1_3:44805794-44805813 Msa0120160:intron 60.0%
ATGATTCTGGGCTCACCCGG+CGG - chr1_3:44806381-44806400 None:intergenic 60.0%
CGGGTGAGCCCAGAATCATG+AGG + chr1_3:44806382-44806401 Msa0120160:CDS 60.0%
GGCTGCGAAGCACGGGAGAA+TGG - chr1_3:44805009-44805028 None:intergenic 65.0%
AGGAAGCGGCTGCGAAGCAC+GGG - chr1_3:44805016-44805035 None:intergenic 65.0%
CAGCCGCTTCCTTCTCACGG+TGG + chr1_3:44805024-44805043 Msa0120160:CDS 65.0%
CCGCCACCGTGAGAAGGAAG+CGG - chr1_3:44805030-44805049 None:intergenic 65.0%
CCGCTTCCTTCTCACGGTGG+CGG + chr1_3:44805027-44805046 Msa0120160:CDS 65.0%
TACAGCCCCACCGACGACGA+TGG + chr1_3:44805073-44805092 Msa0120160:CDS 65.0%
TGCGCCCATGTCTGGTCGCT+TGG - chr1_3:44806344-44806363 None:intergenic 65.0%
GGCTGCGAAGCACGGGAGAA+TGG - chr1_3:44805009-44805028 None:intergenic 65.0%
AGGAAGCGGCTGCGAAGCAC+GGG - chr1_3:44805016-44805035 None:intergenic 65.0%
CAGCCGCTTCCTTCTCACGG+TGG + chr1_3:44805024-44805043 Msa0120160:CDS 65.0%
CCGCCACCGTGAGAAGGAAG+CGG - chr1_3:44805030-44805049 None:intergenic 65.0%
CCGCTTCCTTCTCACGGTGG+CGG + chr1_3:44805027-44805046 Msa0120160:CDS 65.0%
TACAGCCCCACCGACGACGA+TGG + chr1_3:44805073-44805092 Msa0120160:CDS 65.0%
TGCGCCCATGTCTGGTCGCT+TGG - chr1_3:44806344-44806363 None:intergenic 65.0%
! TGGGTGCCGCCACCGTGAGA+AGG - chr1_3:44805036-44805055 None:intergenic 70.0%
GGCGGCACCCAAAGCTTCCG+CGG + chr1_3:44805045-44805064 Msa0120160:CDS 70.0%
GCGGCACCCAAAGCTTCCGC+GGG + chr1_3:44805046-44805065 Msa0120160:CDS 70.0%
GGTGGGGCTGTAGCTTCCCG+CGG - chr1_3:44805065-44805084 None:intergenic 70.0%
! TGGGTGCCGCCACCGTGAGA+AGG - chr1_3:44805036-44805055 None:intergenic 70.0%
GGCGGCACCCAAAGCTTCCG+CGG + chr1_3:44805045-44805064 Msa0120160:CDS 70.0%
GCGGCACCCAAAGCTTCCGC+GGG + chr1_3:44805046-44805065 Msa0120160:CDS 70.0%
GGTGGGGCTGTAGCTTCCCG+CGG - chr1_3:44805065-44805084 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 44804735 44806721 44804735 ID=Msa0120160;Name=Msa0120160
chr1_3 mRNA 44804735 44806721 44804735 ID=Msa0120160-mRNA-1;Parent=Msa0120160;Name=Msa0120160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=140|1|1|1|1|1|3|269|190
chr1_3 exon 44804735 44805165 44804735 ID=Msa0120160-mRNA-1:exon:13396;Parent=Msa0120160-mRNA-1
chr1_3 exon 44805377 44805430 44805377 ID=Msa0120160-mRNA-1:exon:13397;Parent=Msa0120160-mRNA-1
chr1_3 exon 44806225 44806721 44806225 ID=Msa0120160-mRNA-1:exon:13398;Parent=Msa0120160-mRNA-1
chr1_3 five_prime_UTR 44804735 44804874 44804735 ID=Msa0120160-mRNA-1:five_prime_utr;Parent=Msa0120160-mRNA-1
chr1_3 CDS 44804875 44805165 44804875 ID=Msa0120160-mRNA-1:cds;Parent=Msa0120160-mRNA-1
chr1_3 CDS 44805377 44805430 44805377 ID=Msa0120160-mRNA-1:cds;Parent=Msa0120160-mRNA-1
chr1_3 CDS 44806225 44806452 44806225 ID=Msa0120160-mRNA-1:cds;Parent=Msa0120160-mRNA-1
chr1_3 three_prime_UTR 44806453 44806721 44806453 ID=Msa0120160-mRNA-1:three_prime_utr;Parent=Msa0120160-mRNA-1
Gene Sequence

>Msa0120160

ATGGCGGTAAGTGGTAGTATAAGGCAGCAGAGTTTATGCTTGAGTGTGCAGCTGAGAGGAACAGGACTGAATTCCCATGTTCCTCTGCCTTCTCAGCACTCCCTCATTTCTAATTACCACAATACCACCCACCATTCTCCCGTGCTTCGCAGCCGCTTCCTTCTCACGGTGGCGGCACCCAAAGCTTCCGCGGGAAGCTACAGCCCCACCGACGACGATGGAGTCTCTCTGGGCACCATGAAGCTGCCTGTCAACATAGACCTTCAGAGATTCGATTCCCTGCTCTTTCAGTGGGCAAACAGCCTTTGCCAGGGAGCCAGTCTACCACTTTCCACGCCTCTCAAGGTTGACAAAATACCCGGTGGAGCAAGATTAGGGTTTATAGACATTGGGGAAACAGAAGTTCTTGTGTATATTGACTGTTTGGTTTTTAAACCAAATGAAAGTTCTCCTCCAGTTTTCCAAGCGACCAGACATGGGCGCATGAAAGATAAGGTGCCGCCGGGTGAGCCCAGAATCATGAGGAGCCTTATGGAAGCTCTTCAGAAGTCAGTTCAGATTGCCTCATTGTGA

Protein sequence

>Msa0120160

MAVSGSIRQQSLCLSVQLRGTGLNSHVPLPSQHSLISNYHNTTHHSPVLRSRFLLTVAAPKASAGSYSPTDDDGVSLGTMKLPVNIDLQRFDSLLFQWANSLCQGASLPLSTPLKVDKIPGGARLGFIDIGETEVLVYIDCLVFKPNESSPPVFQATRHGRMKDKVPPGEPRIMRSLMEALQKSVQIASL*