Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408390 | XP_003629540.2 | 95.477 | 995 | 22 | 2 | 1 | 973 | 1 | 994 | 0.0 | 1941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408390 | sp|Q9SH30|HMA5_ARATH | 70.445 | 944 | 249 | 6 | 56 | 973 | 54 | 993 | 0.0 | 1363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408390 | G7LFM9 | 95.477 | 995 | 22 | 2 | 1 | 973 | 1 | 994 | 0.0 | 1941 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024650 | Msa1408390 | 0.805036 | 1.620565e-49 | -8.615850e-47 |
| Msa0025570 | Msa1408390 | 0.804358 | 2.245090e-49 | -8.615850e-47 |
| Msa0028690 | Msa1408390 | 0.808994 | 2.355184e-50 | -8.615850e-47 |
| Msa0033220 | Msa1408390 | 0.801105 | 1.053299e-48 | -8.615850e-47 |
| Msa0038150 | Msa1408390 | -0.833082 | 6.542013e-56 | -8.615850e-47 |
| Msa0046870 | Msa1408390 | 0.801213 | 1.001239e-48 | -8.615850e-47 |
| Msa0055830 | Msa1408390 | 0.805009 | 1.641507e-49 | -8.615850e-47 |
| Msa0055940 | Msa1408390 | 0.820562 | 6.422758e-53 | -8.615850e-47 |
| Msa0060410 | Msa1408390 | 0.807093 | 5.981423e-50 | -8.615850e-47 |
| Msa0063940 | Msa1408390 | 0.815926 | 7.198633e-52 | -8.615850e-47 |
| Msa0072180 | Msa1408390 | 0.830851 | 2.326373e-55 | -8.615850e-47 |
| Msa0073110 | Msa1408390 | 0.800251 | 1.573026e-48 | -8.615850e-47 |
| Msa0095890 | Msa1408390 | -0.812260 | 4.635667e-51 | -8.615850e-47 |
| Msa0119240 | Msa1408390 | 0.802457 | 5.560476e-49 | -8.615850e-47 |
| Msa0120100 | Msa1408390 | -0.801036 | 1.088308e-48 | -8.615850e-47 |
| Msa0120160 | Msa1408390 | -0.800670 | 1.292748e-48 | -8.615850e-47 |
| Msa0120450 | Msa1408390 | 0.809899 | 1.505866e-50 | -8.615850e-47 |
| Msa1348170 | Msa1408390 | -0.808744 | 2.663955e-50 | -8.615850e-47 |
| Msa1368390 | Msa1408390 | 0.818757 | 1.659035e-52 | -8.615850e-47 |
| Msa1384700 | Msa1408390 | 0.809722 | 1.644197e-50 | -8.615850e-47 |
| Msa1401910 | Msa1408390 | 0.807345 | 5.289551e-50 | -8.615850e-47 |
| Msa1404810 | Msa1408390 | -0.823888 | 1.086524e-53 | -8.615850e-47 |
| Msa1407810 | Msa1408390 | 0.817563 | 3.089883e-52 | -8.615850e-47 |
| Msa1408390 | Msa1412330 | -0.814868 | 1.237169e-51 | -8.615850e-47 |
| Msa1408390 | Msa1422860 | 0.830391 | 3.014941e-55 | -8.615850e-47 |
| Msa1408390 | Msa1424870 | 0.819036 | 1.433770e-52 | -8.615850e-47 |
| Msa1408390 | Msa1428230 | -0.802727 | 4.891366e-49 | -8.615850e-47 |
| Msa1408390 | Msa1430950 | 0.805788 | 1.126901e-49 | -8.615850e-47 |
| Msa1408390 | Msa1433040 | 0.815208 | 1.039790e-51 | -8.615850e-47 |
| Msa1408390 | Msa1433360 | 0.837136 | 6.209902e-57 | -8.615850e-47 |
| Msa1408390 | Msa1433570 | 0.850087 | 2.130211e-60 | -8.615850e-47 |
| Msa1408390 | Msa1436400 | 0.815340 | 9.720459e-52 | -8.615850e-47 |
| Msa1408390 | Msa1437780 | 0.818838 | 1.590276e-52 | -8.615850e-47 |
| Msa1408390 | Msa1439250 | 0.847257 | 1.296418e-59 | -8.615850e-47 |
| Msa1408390 | Msa1445530 | 0.811477 | 6.865543e-51 | -8.615850e-47 |
| Msa0603310 | Msa1408390 | 0.818935 | 1.512071e-52 | -8.615850e-47 |
| Msa0606600 | Msa1408390 | 0.820162 | 7.935243e-53 | -8.615850e-47 |
| Msa0610690 | Msa1408390 | 0.836855 | 7.328621e-57 | -8.615850e-47 |
| Msa0622850 | Msa1408390 | 0.805719 | 1.165314e-49 | -8.615850e-47 |
| Msa0636540 | Msa1408390 | 0.800905 | 1.157504e-48 | -8.615850e-47 |
| Msa0644330 | Msa1408390 | 0.822907 | 1.842332e-53 | -8.615850e-47 |
| Msa0647300 | Msa1408390 | 0.815643 | 8.320438e-52 | -8.615850e-47 |
| Msa0657710 | Msa1408390 | 0.859699 | 3.451237e-63 | -8.615850e-47 |
| Msa0657720 | Msa1408390 | 0.822739 | 2.016734e-53 | -8.615850e-47 |
| Msa0663480 | Msa1408390 | 0.801031 | 1.090632e-48 | -8.615850e-47 |
| Msa0674480 | Msa1408390 | 0.869960 | 2.091708e-66 | -8.615850e-47 |
| Msa0674510 | Msa1408390 | 0.831175 | 1.937811e-55 | -8.615850e-47 |
| Msa0686830 | Msa1408390 | 0.823051 | 1.705138e-53 | -8.615850e-47 |
| Msa0702790 | Msa1408390 | 0.817897 | 2.597706e-52 | -8.615850e-47 |
| Msa0702800 | Msa1408390 | 0.857466 | 1.601282e-62 | -8.615850e-47 |
| Msa0707330 | Msa1408390 | 0.823795 | 1.142912e-53 | -8.615850e-47 |
| Msa0719600 | Msa1408390 | 0.836646 | 8.284060e-57 | -8.615850e-47 |
| Msa0736920 | Msa1408390 | 0.806301 | 8.792905e-50 | -8.615850e-47 |
| Msa0742370 | Msa1408390 | -0.823267 | 1.518254e-53 | -8.615850e-47 |
| Msa0753590 | Msa1408390 | -0.803912 | 2.779745e-49 | -8.615850e-47 |
| Msa0755880 | Msa1408390 | 0.804166 | 2.461019e-49 | -8.615850e-47 |
| Msa0758990 | Msa1408390 | 0.830593 | 2.690970e-55 | -8.615850e-47 |
| Msa0778570 | Msa1408390 | 0.806501 | 7.976223e-50 | -8.615850e-47 |
| Msa0782750 | Msa1408390 | 0.801404 | 9.148915e-49 | -8.615850e-47 |
| Msa0795750 | Msa1408390 | 0.810703 | 1.010052e-50 | -8.615850e-47 |
| Msa0800120 | Msa1408390 | 0.862177 | 6.096442e-64 | -8.615850e-47 |
| Msa0800150 | Msa1408390 | 0.863013 | 3.370060e-64 | -8.615850e-47 |
| Msa0800180 | Msa1408390 | 0.873257 | 1.691902e-67 | -8.615850e-47 |
| Msa0810330 | Msa1408390 | 0.809072 | 2.266529e-50 | -8.615850e-47 |
| Msa0823480 | Msa1408390 | -0.829910 | 3.951846e-55 | -8.615850e-47 |
| Msa0827340 | Msa1408390 | -0.820794 | 5.683260e-53 | -8.615850e-47 |
| Msa0828950 | Msa1408390 | 0.824219 | 9.087136e-54 | -8.615850e-47 |
| Msa0828960 | Msa1408390 | 0.862214 | 5.937801e-64 | -8.615850e-47 |
| Msa0833200 | Msa1408390 | -0.817813 | 2.714828e-52 | -8.615850e-47 |
| Msa0838210 | Msa1408390 | 0.833816 | 4.289951e-56 | -8.615850e-47 |
| Msa0838620 | Msa1408390 | -0.806249 | 9.015890e-50 | -8.615850e-47 |
| Msa0127350 | Msa1408390 | -0.800836 | 1.195562e-48 | -8.615850e-47 |
| Msa0133140 | Msa1408390 | -0.831950 | 1.248308e-55 | -8.615850e-47 |
| Msa0180380 | Msa1408390 | 0.803426 | 3.506644e-49 | -8.615850e-47 |
| Msa0183310 | Msa1408390 | -0.803374 | 3.593613e-49 | -8.615850e-47 |
| Msa0187540 | Msa1408390 | 0.807010 | 6.226921e-50 | -8.615850e-47 |
| Msa0189560 | Msa1408390 | -0.808871 | 2.503130e-50 | -8.615850e-47 |
| Msa0198990 | Msa1408390 | 0.820286 | 7.431723e-53 | -8.615850e-47 |
| Msa0217060 | Msa1408390 | 0.807754 | 4.331782e-50 | -8.615850e-47 |
| Msa0218500 | Msa1408390 | 0.816536 | 5.257212e-52 | -8.615850e-47 |
| Msa0219280 | Msa1408390 | 0.812732 | 3.655291e-51 | -8.615850e-47 |
| Msa1240220 | Msa1408390 | 0.820348 | 7.192412e-53 | -8.615850e-47 |
| Msa1247200 | Msa1408390 | -0.803422 | 3.512154e-49 | -8.615850e-47 |
| Msa1255210 | Msa1408390 | 0.817776 | 2.767235e-52 | -8.615850e-47 |
| Msa1255740 | Msa1408390 | 0.830660 | 2.591092e-55 | -8.615850e-47 |
| Msa1256490 | Msa1408390 | -0.821165 | 4.666591e-53 | -8.615850e-47 |
| Msa1265300 | Msa1408390 | 0.814589 | 1.426354e-51 | -8.615850e-47 |
| Msa1268360 | Msa1408390 | 0.872422 | 3.218966e-67 | -8.615850e-47 |
| Msa1268390 | Msa1408390 | 0.879327 | 1.364060e-69 | -8.615850e-47 |
| Msa1268420 | Msa1408390 | 0.869973 | 2.071430e-66 | -8.615850e-47 |
| Msa1273320 | Msa1408390 | 0.804750 | 1.859602e-49 | -8.615850e-47 |
| Msa1283930 | Msa1408390 | 0.806393 | 8.407315e-50 | -8.615850e-47 |
| Msa1284020 | Msa1408390 | 0.807922 | 3.990012e-50 | -8.615850e-47 |
| Msa1287100 | Msa1408390 | -0.813296 | 2.749942e-51 | -8.615850e-47 |
| Msa1295210 | Msa1408390 | -0.803483 | 3.411450e-49 | -8.615850e-47 |
| Msa1295480 | Msa1408390 | -0.821251 | 4.458341e-53 | -8.615850e-47 |
| Msa1295650 | Msa1408390 | 0.816529 | 5.276306e-52 | -8.615850e-47 |
| Msa1301280 | Msa1408390 | -0.821765 | 3.392937e-53 | -8.615850e-47 |
| Msa1322960 | Msa1408390 | 0.807534 | 4.822839e-50 | -8.615850e-47 |
| Msa1323070 | Msa1408390 | 0.845227 | 4.630650e-59 | -8.615850e-47 |
| Msa1325560 | Msa1408390 | -0.802378 | 5.773028e-49 | -8.615850e-47 |
| Msa1329480 | Msa1408390 | 0.800785 | 1.224444e-48 | -8.615850e-47 |
| Msa1331570 | Msa1408390 | -0.804615 | 1.984170e-49 | -8.615850e-47 |
| Msa1337350 | Msa1408390 | 0.837759 | 4.301301e-57 | -8.615850e-47 |
| Msa1338810 | Msa1408390 | -0.800591 | 1.341631e-48 | -8.615850e-47 |
| Msa1343600 | Msa1408390 | 0.807755 | 4.327967e-50 | -8.615850e-47 |
| Msa0365210 | Msa1408390 | 0.835497 | 1.621779e-56 | -8.615850e-47 |
| Msa0375330 | Msa1408390 | -0.808887 | 2.482940e-50 | -8.615850e-47 |
| Msa0384780 | Msa1408390 | -0.804621 | 1.978151e-49 | -8.615850e-47 |
| Msa0402070 | Msa1408390 | -0.808656 | 2.782566e-50 | -8.615850e-47 |
| Msa0403740 | Msa1408390 | -0.800427 | 1.448702e-48 | -8.615850e-47 |
| Msa0412580 | Msa1408390 | -0.801860 | 7.378043e-49 | -8.615850e-47 |
| Msa0437440 | Msa1408390 | -0.822586 | 2.188773e-53 | -8.615850e-47 |
| Msa0480900 | Msa1408390 | -0.810593 | 1.066914e-50 | -8.615850e-47 |
| Msa0481630 | Msa1408390 | 0.803354 | 3.628467e-49 | -8.615850e-47 |
| Msa0993190 | Msa1408390 | 0.800748 | 1.246238e-48 | -8.615850e-47 |
| Msa1001120 | Msa1408390 | 0.814986 | 1.165183e-51 | -8.615850e-47 |
| Msa1001930 | Msa1408390 | -0.802046 | 6.754499e-49 | -8.615850e-47 |
| Msa1002550 | Msa1408390 | -0.806320 | 8.711373e-50 | -8.615850e-47 |
| Msa1015360 | Msa1408390 | 0.838336 | 3.055898e-57 | -8.615850e-47 |
| Msa1019420 | Msa1408390 | 0.848362 | 6.431626e-60 | -8.615850e-47 |
| Msa1022420 | Msa1408390 | 0.801397 | 9.181440e-49 | -8.615850e-47 |
| Msa1039440 | Msa1408390 | -0.800462 | 1.425365e-48 | -8.615850e-47 |
| Msa1044250 | Msa1408390 | 0.823717 | 1.191582e-53 | -8.615850e-47 |
| Msa1068950 | Msa1408390 | 0.808135 | 3.593921e-50 | -8.615850e-47 |
| Msa1068960 | Msa1408390 | 0.802014 | 6.858001e-49 | -8.615850e-47 |
| Msa1081170 | Msa1408390 | 0.816775 | 4.647602e-52 | -8.615850e-47 |
| Msa1082410 | Msa1408390 | 0.836504 | 9.003023e-57 | -8.615850e-47 |
| Msa1092310 | Msa1408390 | 0.821232 | 4.503474e-53 | -8.615850e-47 |
| Msa1103260 | Msa1408390 | 0.801529 | 8.625484e-49 | -8.615850e-47 |
| Msa1106590 | Msa1408390 | 0.820515 | 6.584622e-53 | -8.615850e-47 |
| Msa0241750 | Msa1408390 | 0.826110 | 3.247191e-54 | -8.615850e-47 |
| Msa0256920 | Msa1408390 | 0.819796 | 9.621330e-53 | -8.615850e-47 |
| Msa0258910 | Msa1408390 | 0.811014 | 8.654049e-51 | -8.615850e-47 |
| Msa0279810 | Msa1408390 | 0.822074 | 2.877477e-53 | -8.615850e-47 |
| Msa0282960 | Msa1408390 | 0.800993 | 1.110327e-48 | -8.615850e-47 |
| Msa0297340 | Msa1408390 | 0.803216 | 3.875085e-49 | -8.615850e-47 |
| Msa0299130 | Msa1408390 | -0.810921 | 9.063027e-51 | -8.615850e-47 |
| Msa0307740 | Msa1408390 | 0.816446 | 5.506962e-52 | -8.615850e-47 |
| Msa0313900 | Msa1408390 | 0.817183 | 3.763893e-52 | -8.615850e-47 |
| Msa0319220 | Msa1408390 | 0.819367 | 1.205639e-52 | -8.615850e-47 |
| Msa0340700 | Msa1408390 | -0.802312 | 5.955905e-49 | -8.615850e-47 |
| Msa0354600 | Msa1408390 | 0.806460 | 8.139174e-50 | -8.615850e-47 |
| Msa0355080 | Msa1408390 | -0.800693 | 1.278769e-48 | -8.615850e-47 |
| Msa0358300 | Msa1408390 | 0.804983 | 1.662298e-49 | -8.615850e-47 |
| Msa0364030 | Msa1408390 | -0.802281 | 6.043186e-49 | -8.615850e-47 |
| Msa1111910 | Msa1408390 | 0.814073 | 1.855173e-51 | -8.615850e-47 |
| Msa1128520 | Msa1408390 | -0.824851 | 6.452071e-54 | -8.615850e-47 |
| Msa1129330 | Msa1408390 | 0.801791 | 7.622168e-49 | -8.615850e-47 |
| Msa1133750 | Msa1408390 | 0.827846 | 1.248654e-54 | -8.615850e-47 |
| Msa1154060 | Msa1408390 | 0.818462 | 1.935799e-52 | -8.615850e-47 |
| Msa1154320 | Msa1408390 | 0.856257 | 3.635754e-62 | -8.615850e-47 |
| Msa1156720 | Msa1408390 | 0.831241 | 1.866430e-55 | -8.615850e-47 |
| Msa1165460 | Msa1408390 | 0.816913 | 4.328322e-52 | -8.615850e-47 |
| Msa1167310 | Msa1408390 | 0.801329 | 9.478728e-49 | -8.615850e-47 |
| Msa1184680 | Msa1408390 | 0.853692 | 2.019946e-61 | -8.615850e-47 |
| Msa1191530 | Msa1408390 | -0.804054 | 2.597106e-49 | -8.615850e-47 |
| Msa1192120 | Msa1408390 | 0.801706 | 7.933635e-49 | -8.615850e-47 |
| Msa1193940 | Msa1408390 | 0.889043 | 3.448385e-73 | -8.615850e-47 |
| Msa1197720 | Msa1408390 | 0.802452 | 5.573248e-49 | -8.615850e-47 |
| Msa1202800 | Msa1408390 | 0.817551 | 3.110109e-52 | -8.615850e-47 |
| Msa1203650 | Msa1408390 | 0.929042 | 1.224387e-92 | -8.615850e-47 |
| Msa1204780 | Msa1408390 | 0.800157 | 1.644352e-48 | -8.615850e-47 |
| Msa1204790 | Msa1408390 | 0.809630 | 1.720376e-50 | -8.615850e-47 |
| Msa1204870 | Msa1408390 | -0.817348 | 3.454381e-52 | -8.615850e-47 |
| Msa1204900 | Msa1408390 | -0.814465 | 1.519747e-51 | -8.615850e-47 |
| Msa1212830 | Msa1408390 | 0.802111 | 6.551334e-49 | -8.615850e-47 |
| Msa1215540 | Msa1408390 | -0.816538 | 5.252917e-52 | -8.615850e-47 |
| Msa1221270 | Msa1408390 | 0.835941 | 1.251224e-56 | -8.615850e-47 |
| Msa0536970 | Msa1408390 | -0.803630 | 3.181021e-49 | -8.615850e-47 |
| Msa0566280 | Msa1408390 | 0.825041 | 5.818989e-54 | -8.615850e-47 |
| Msa0567330 | Msa1408390 | 0.824480 | 7.888750e-54 | -8.615850e-47 |
| Msa0567570 | Msa1408390 | 0.800651 | 1.303927e-48 | -8.615850e-47 |
| Msa0576320 | Msa1408390 | 0.809186 | 2.143172e-50 | -8.615850e-47 |
| Msa0578830 | Msa1408390 | 0.807722 | 4.399104e-50 | -8.615850e-47 |
| Msa0578930 | Msa1408390 | 0.801868 | 7.347321e-49 | -8.615850e-47 |
| Msa0579160 | Msa1408390 | 0.807556 | 4.772600e-50 | -8.615850e-47 |
| Msa0579220 | Msa1408390 | 0.809900 | 1.505205e-50 | -8.615850e-47 |
| Msa0581350 | Msa1408390 | 0.826712 | 2.334055e-54 | -8.615850e-47 |
| Msa0585330 | Msa1408390 | 0.806396 | 8.397079e-50 | -8.615850e-47 |
| Msa0590620 | Msa1408390 | -0.845742 | 3.359427e-59 | -8.615850e-47 |
| Msa0596840 | Msa1408390 | 0.831461 | 1.648022e-55 | -8.615850e-47 |
| Msa0853200 | Msa1408390 | -0.824655 | 7.176491e-54 | -8.615850e-47 |
| Msa0853590 | Msa1408390 | 0.814704 | 1.345616e-51 | -8.615850e-47 |
| Msa0862480 | Msa1408390 | -0.827280 | 1.706604e-54 | -8.615850e-47 |
| Msa0901270 | Msa1408390 | 0.806368 | 8.509970e-50 | -8.615850e-47 |
| Msa0909260 | Msa1408390 | 0.805424 | 1.343883e-49 | -8.615850e-47 |
| Msa0910170 | Msa1408390 | 0.806029 | 1.002979e-49 | -8.615850e-47 |
| Msa0928180 | Msa1408390 | 0.802530 | 5.369556e-49 | -8.615850e-47 |
| Msa0930270 | Msa1408390 | 0.808660 | 2.777029e-50 | -8.615850e-47 |
| Msa0935840 | Msa1408390 | -0.832390 | 9.715437e-56 | -8.615850e-47 |
| Msa0940910 | Msa1408390 | 0.804244 | 2.370371e-49 | -8.615850e-47 |
| Msa0945030 | Msa1408390 | 0.820667 | 6.076261e-53 | -8.615850e-47 |
| Msa0964400 | Msa1408390 | -0.812096 | 5.034773e-51 | -8.615850e-47 |
| Msa0966590 | Msa1408390 | 0.802990 | 4.315828e-49 | -8.615850e-47 |
| Msa0972680 | Msa1408390 | 0.801225 | 9.952901e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408390 | MtrunA17_Chr8g0374321 | 97.345 | 678 | 17 | 1 | 1 | 678 | 1 | 677 | 0.0 | 1372 |
| Msa1408390 | MtrunA17_Chr5g0397621 | 71.300 | 892 | 227 | 7 | 106 | 973 | 13 | 899 | 0.0 | 1297 |
| Msa1408390 | MtrunA17_Chr8g0339181 | 54.632 | 950 | 395 | 6 | 44 | 965 | 16 | 957 | 0.0 | 1002 |
| Msa1408390 | MtrunA17_Chr8g0339181 | 27.273 | 154 | 108 | 2 | 119 | 271 | 15 | 165 | 7.04e-12 | 69.7 |
| Msa1408390 | MtrunA17_Chr2g0297051 | 46.952 | 935 | 457 | 7 | 59 | 959 | 84 | 1013 | 0.0 | 815 |
| Msa1408390 | MtrunA17_Chr4g0052521 | 46.211 | 950 | 465 | 9 | 59 | 967 | 45 | 989 | 0.0 | 811 |
| Msa1408390 | MtrunA17_Chr4g0052521 | 30.247 | 162 | 98 | 4 | 30 | 190 | 108 | 255 | 2.22e-13 | 74.7 |
| Msa1408390 | MtrunA17_Chr8g0374331 | 98.387 | 248 | 4 | 0 | 726 | 973 | 1 | 248 | 6.04e-167 | 488 |
| Msa1408390 | MtrunA17_Chr8g0374391 | 98.340 | 241 | 4 | 0 | 733 | 973 | 1 | 241 | 1.22e-161 | 474 |
| Msa1408390 | MtrunA17_Chr8g0374371 | 97.872 | 188 | 3 | 1 | 437 | 624 | 1 | 187 | 4.27e-123 | 373 |
| Msa1408390 | MtrunA17_Chr4g0050431 | 37.947 | 643 | 336 | 9 | 353 | 954 | 287 | 907 | 5.71e-121 | 392 |
| Msa1408390 | MtrunA17_Chr3g0136331 | 35.008 | 657 | 367 | 12 | 353 | 960 | 241 | 886 | 2.72e-107 | 354 |
| Msa1408390 | MtrunA17_Chr4g0071991 | 31.336 | 584 | 324 | 15 | 402 | 953 | 159 | 697 | 8.04e-68 | 246 |
| Msa1408390 | MtrunA17_Chr2g0297871 | 28.943 | 577 | 318 | 16 | 423 | 958 | 22 | 547 | 3.18e-66 | 235 |
| Msa1408390 | MtrunA17_Chr4g0053441 | 27.244 | 624 | 368 | 19 | 369 | 934 | 174 | 769 | 1.54e-43 | 171 |
| Msa1408390 | MtrunA17_Chr5g0397631 | 55.435 | 92 | 32 | 3 | 14 | 103 | 12 | 96 | 2.27e-21 | 98.2 |
| Msa1408390 | MtrunA17_Chr5g0401211 | 33.898 | 177 | 88 | 3 | 768 | 915 | 649 | 825 | 5.36e-21 | 99.4 |
| Msa1408390 | MtrunA17_Chr3g0134771 | 33.523 | 176 | 89 | 3 | 768 | 915 | 652 | 827 | 3.00e-20 | 97.1 |
| Msa1408390 | MtrunA17_Chr4g0054021 | 32.768 | 177 | 90 | 3 | 768 | 915 | 572 | 748 | 9.92e-20 | 95.1 |
| Msa1408390 | MtrunA17_Chr4g0020551 | 32.768 | 177 | 91 | 3 | 767 | 915 | 584 | 760 | 2.89e-18 | 90.5 |
| Msa1408390 | MtrunA17_Chr7g0263361 | 25.545 | 321 | 162 | 8 | 629 | 912 | 523 | 803 | 7.37e-18 | 89.4 |
| Msa1408390 | MtrunA17_Chr2g0298031 | 32.447 | 188 | 90 | 2 | 766 | 923 | 486 | 666 | 1.04e-17 | 88.6 |
| Msa1408390 | MtrunA17_Chr8g0382071 | 31.667 | 180 | 94 | 3 | 767 | 917 | 648 | 827 | 3.15e-17 | 87.4 |
| Msa1408390 | MtrunA17_Chr4g0002331 | 27.619 | 210 | 118 | 3 | 741 | 917 | 684 | 892 | 4.14e-17 | 87.0 |
| Msa1408390 | MtrunA17_Chr2g0298871 | 27.717 | 184 | 100 | 2 | 767 | 917 | 696 | 879 | 5.36e-17 | 86.7 |
| Msa1408390 | MtrunA17_Chr8g0340261 | 29.508 | 183 | 97 | 3 | 767 | 917 | 193 | 375 | 5.75e-17 | 85.5 |
| Msa1408390 | MtrunA17_Chr1g0173111 | 31.461 | 178 | 93 | 3 | 767 | 915 | 645 | 822 | 9.61e-17 | 85.5 |
| Msa1408390 | MtrunA17_Chr3g0138931 | 31.383 | 188 | 92 | 2 | 766 | 923 | 480 | 660 | 1.07e-16 | 85.5 |
| Msa1408390 | MtrunA17_Chr6g0456201 | 29.032 | 186 | 100 | 3 | 764 | 917 | 638 | 823 | 1.34e-16 | 85.1 |
| Msa1408390 | MtrunA17_Chr4g0072131 | 29.646 | 226 | 116 | 4 | 766 | 951 | 483 | 705 | 1.76e-16 | 84.7 |
| Msa1408390 | MtrunA17_Chr4g0065481 | 30.319 | 188 | 94 | 2 | 766 | 923 | 481 | 661 | 2.42e-16 | 84.3 |
| Msa1408390 | MtrunA17_Chr6g0452721 | 29.851 | 201 | 106 | 3 | 766 | 934 | 482 | 679 | 2.46e-16 | 84.3 |
| Msa1408390 | MtrunA17_Chr1g0147981 | 30.851 | 188 | 93 | 2 | 766 | 923 | 497 | 677 | 2.81e-16 | 84.0 |
| Msa1408390 | MtrunA17_Chr1g0148031 | 30.851 | 188 | 93 | 2 | 766 | 923 | 480 | 660 | 2.88e-16 | 84.0 |
| Msa1408390 | MtrunA17_Chr8g0365021 | 30.851 | 188 | 93 | 2 | 766 | 923 | 550 | 730 | 3.47e-16 | 84.0 |
| Msa1408390 | MtrunA17_Chr7g0276551 | 30.964 | 197 | 102 | 3 | 769 | 934 | 249 | 442 | 3.68e-16 | 83.6 |
| Msa1408390 | MtrunA17_Chr7g0260401 | 27.568 | 185 | 100 | 2 | 767 | 917 | 672 | 856 | 4.05e-16 | 83.6 |
| Msa1408390 | MtrunA17_Chr4g0059961 | 28.856 | 201 | 108 | 3 | 766 | 934 | 484 | 681 | 5.48e-16 | 83.2 |
| Msa1408390 | MtrunA17_Chr8g0335291 | 30.000 | 200 | 106 | 3 | 766 | 934 | 488 | 684 | 6.59e-16 | 82.8 |
| Msa1408390 | MtrunA17_Chr2g0333721 | 30.481 | 187 | 92 | 2 | 767 | 915 | 479 | 665 | 1.38e-15 | 82.0 |
| Msa1408390 | MtrunA17_Chr2g0304941 | 30.114 | 176 | 93 | 1 | 767 | 912 | 482 | 657 | 4.63e-15 | 80.1 |
| Msa1408390 | MtrunA17_Chr8g0381711 | 28.877 | 187 | 106 | 3 | 738 | 897 | 486 | 672 | 1.13e-14 | 79.0 |
| Msa1408390 | MtrunA17_Chr3g0134951 | 26.904 | 197 | 110 | 2 | 764 | 926 | 580 | 776 | 1.47e-14 | 78.6 |
| Msa1408390 | MtrunA17_Chr8g0346461 | 28.994 | 169 | 86 | 2 | 767 | 901 | 619 | 787 | 2.04e-14 | 78.2 |
| Msa1408390 | MtrunA17_Chr8g0355421 | 30.488 | 164 | 85 | 3 | 767 | 901 | 639 | 802 | 1.53e-13 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408390 | AT1G63440.1 | 70.445 | 944 | 249 | 6 | 56 | 973 | 54 | 993 | 0.0 | 1363 |
| Msa1408390 | AT5G44790.1 | 46.570 | 962 | 470 | 8 | 43 | 967 | 44 | 998 | 0.0 | 832 |
| Msa1408390 | AT5G21930.2 | 35.143 | 663 | 369 | 13 | 353 | 965 | 232 | 883 | 1.33e-112 | 368 |
| Msa1408390 | AT5G21930.1 | 35.143 | 663 | 369 | 13 | 353 | 965 | 232 | 883 | 1.33e-112 | 368 |
| Msa1408390 | AT4G33520.2 | 37.147 | 638 | 344 | 11 | 353 | 954 | 300 | 916 | 1.57e-108 | 359 |
| Msa1408390 | AT4G33520.3 | 37.147 | 638 | 344 | 11 | 353 | 954 | 300 | 916 | 2.01e-108 | 358 |
| Msa1408390 | AT5G21930.3 | 33.786 | 663 | 355 | 14 | 353 | 965 | 232 | 860 | 1.04e-100 | 335 |
| Msa1408390 | AT5G21930.4 | 33.619 | 583 | 328 | 12 | 353 | 886 | 232 | 804 | 2.78e-87 | 298 |
| Msa1408390 | AT4G30110.1 | 29.072 | 657 | 382 | 17 | 337 | 960 | 95 | 700 | 2.70e-68 | 247 |
| Msa1408390 | AT4G30110.2 | 29.072 | 657 | 382 | 17 | 337 | 960 | 95 | 700 | 2.70e-68 | 247 |
| Msa1408390 | AT2G19110.2 | 29.441 | 608 | 344 | 18 | 403 | 969 | 166 | 729 | 4.00e-61 | 227 |
| Msa1408390 | AT2G19110.3 | 29.441 | 608 | 344 | 18 | 403 | 969 | 166 | 729 | 4.00e-61 | 227 |
| Msa1408390 | AT2G19110.1 | 29.441 | 608 | 344 | 18 | 403 | 969 | 166 | 729 | 4.00e-61 | 227 |
| Msa1408390 | AT4G37270.1 | 25.963 | 597 | 363 | 17 | 393 | 934 | 192 | 764 | 7.11e-39 | 156 |
| Msa1408390 | AT4G30120.2 | 30.226 | 354 | 194 | 10 | 403 | 732 | 3 | 327 | 1.18e-38 | 149 |
| Msa1408390 | AT4G30120.1 | 30.226 | 354 | 194 | 10 | 403 | 732 | 162 | 486 | 1.85e-37 | 149 |
| Msa1408390 | AT4G37640.1 | 32.768 | 177 | 90 | 3 | 768 | 915 | 649 | 825 | 1.19e-19 | 95.5 |
| Msa1408390 | AT1G27770.4 | 32.768 | 177 | 90 | 3 | 768 | 915 | 652 | 828 | 4.72e-19 | 93.6 |
| Msa1408390 | AT1G27770.1 | 32.768 | 177 | 90 | 3 | 768 | 915 | 652 | 828 | 4.72e-19 | 93.6 |
| Msa1408390 | AT1G27770.3 | 32.768 | 177 | 90 | 3 | 768 | 915 | 589 | 765 | 4.76e-19 | 93.6 |
| Msa1408390 | AT2G41560.2 | 32.402 | 179 | 93 | 2 | 767 | 917 | 541 | 719 | 5.53e-19 | 93.2 |
| Msa1408390 | AT2G41560.3 | 32.402 | 179 | 93 | 2 | 767 | 917 | 541 | 719 | 5.53e-19 | 93.2 |
| Msa1408390 | AT2G41560.4 | 32.402 | 179 | 93 | 2 | 767 | 917 | 541 | 719 | 5.53e-19 | 93.2 |
| Msa1408390 | AT3G57330.1 | 32.402 | 179 | 93 | 2 | 767 | 917 | 640 | 818 | 6.12e-19 | 93.2 |
| Msa1408390 | AT2G41560.1 | 32.402 | 179 | 93 | 2 | 767 | 917 | 643 | 821 | 6.57e-19 | 93.2 |
| Msa1408390 | AT3G57330.2 | 32.402 | 179 | 93 | 2 | 767 | 917 | 585 | 763 | 7.19e-19 | 92.8 |
| Msa1408390 | AT2G22950.1 | 31.638 | 177 | 92 | 3 | 768 | 915 | 650 | 826 | 7.47e-19 | 92.8 |
| Msa1408390 | AT3G21180.1 | 28.261 | 184 | 99 | 2 | 767 | 917 | 691 | 874 | 2.91e-17 | 87.8 |
| Msa1408390 | AT4G29900.1 | 27.143 | 210 | 119 | 3 | 741 | 917 | 653 | 861 | 3.37e-17 | 87.8 |
| Msa1408390 | AT4G29900.2 | 27.143 | 210 | 119 | 3 | 741 | 917 | 653 | 861 | 3.37e-17 | 87.8 |
| Msa1408390 | AT5G57350.3 | 31.915 | 188 | 91 | 3 | 766 | 923 | 217 | 397 | 5.09e-17 | 86.7 |
| Msa1408390 | AT5G57110.1 | 27.717 | 184 | 100 | 2 | 767 | 917 | 674 | 857 | 5.49e-17 | 87.0 |
| Msa1408390 | AT5G57110.3 | 27.717 | 184 | 100 | 2 | 767 | 917 | 674 | 857 | 5.49e-17 | 87.0 |
| Msa1408390 | AT5G57110.2 | 27.717 | 184 | 100 | 2 | 767 | 917 | 674 | 857 | 5.49e-17 | 87.0 |
| Msa1408390 | AT4G30190.1 | 31.915 | 188 | 91 | 2 | 766 | 923 | 478 | 658 | 7.19e-17 | 86.7 |
| Msa1408390 | AT5G57350.4 | 31.915 | 188 | 91 | 3 | 766 | 923 | 479 | 659 | 7.45e-17 | 86.3 |
| Msa1408390 | AT5G57350.2 | 31.915 | 188 | 91 | 3 | 766 | 923 | 479 | 659 | 7.45e-17 | 86.3 |
| Msa1408390 | AT5G57350.1 | 31.915 | 188 | 91 | 3 | 766 | 923 | 479 | 659 | 7.45e-17 | 86.3 |
| Msa1408390 | AT2G18960.3 | 31.915 | 188 | 91 | 2 | 766 | 923 | 414 | 594 | 9.84e-17 | 85.9 |
| Msa1408390 | AT2G18960.2 | 31.915 | 188 | 91 | 2 | 766 | 923 | 414 | 594 | 9.84e-17 | 85.9 |
| Msa1408390 | AT2G18960.1 | 31.915 | 188 | 91 | 2 | 766 | 923 | 478 | 658 | 1.06e-16 | 85.9 |
| Msa1408390 | AT1G07670.2 | 27.528 | 178 | 97 | 2 | 767 | 912 | 621 | 798 | 2.36e-16 | 84.7 |
| Msa1408390 | AT1G07670.1 | 27.528 | 178 | 97 | 2 | 767 | 912 | 621 | 798 | 2.36e-16 | 84.7 |
| Msa1408390 | AT1G07810.1 | 27.528 | 178 | 97 | 2 | 767 | 912 | 621 | 798 | 3.24e-16 | 84.3 |
| Msa1408390 | AT2G07560.1 | 31.250 | 176 | 92 | 1 | 766 | 912 | 481 | 656 | 4.67e-16 | 84.0 |
| Msa1408390 | AT1G17260.1 | 32.609 | 184 | 87 | 2 | 769 | 915 | 489 | 672 | 5.67e-16 | 83.6 |
| Msa1408390 | AT3G47950.1 | 29.353 | 201 | 107 | 3 | 766 | 934 | 486 | 683 | 7.45e-16 | 83.2 |
| Msa1408390 | AT3G47950.2 | 29.353 | 201 | 107 | 3 | 766 | 934 | 486 | 683 | 7.45e-16 | 83.2 |
| Msa1408390 | AT3G42640.1 | 30.348 | 201 | 105 | 3 | 766 | 934 | 481 | 678 | 9.97e-16 | 82.8 |
| Msa1408390 | AT3G22910.1 | 28.261 | 184 | 99 | 2 | 767 | 917 | 636 | 819 | 1.21e-15 | 82.4 |
| Msa1408390 | AT5G62670.1 | 28.856 | 201 | 108 | 3 | 766 | 934 | 482 | 679 | 1.24e-15 | 82.4 |
| Msa1408390 | AT3G60330.4 | 29.798 | 198 | 107 | 3 | 766 | 934 | 481 | 675 | 1.35e-15 | 82.4 |
| Msa1408390 | AT3G60330.3 | 29.798 | 198 | 107 | 3 | 766 | 934 | 481 | 675 | 1.35e-15 | 82.4 |
| Msa1408390 | AT1G10130.1 | 27.411 | 197 | 109 | 2 | 764 | 926 | 579 | 775 | 1.37e-15 | 82.4 |
| Msa1408390 | AT3G60330.2 | 29.798 | 198 | 107 | 3 | 766 | 934 | 481 | 675 | 1.38e-15 | 82.4 |
| Msa1408390 | AT3G60330.1 | 29.798 | 198 | 107 | 3 | 766 | 934 | 481 | 675 | 1.38e-15 | 82.4 |
| Msa1408390 | AT2G24520.4 | 30.319 | 188 | 94 | 2 | 766 | 923 | 217 | 397 | 1.80e-15 | 81.6 |
| Msa1408390 | AT2G24520.3 | 30.319 | 188 | 94 | 2 | 766 | 923 | 460 | 640 | 2.30e-15 | 81.6 |
| Msa1408390 | AT2G24520.1 | 30.319 | 188 | 94 | 2 | 766 | 923 | 460 | 640 | 2.30e-15 | 81.6 |
| Msa1408390 | AT2G24520.2 | 30.319 | 188 | 94 | 2 | 766 | 923 | 523 | 703 | 2.38e-15 | 81.6 |
| Msa1408390 | AT3G63380.1 | 27.451 | 204 | 114 | 3 | 748 | 917 | 620 | 823 | 3.11e-15 | 81.3 |
| Msa1408390 | AT1G80660.2 | 29.944 | 177 | 94 | 1 | 766 | 912 | 354 | 530 | 8.35e-15 | 79.7 |
| Msa1408390 | AT1G80660.1 | 29.944 | 177 | 94 | 1 | 766 | 912 | 483 | 659 | 8.37e-15 | 79.7 |
| Msa1408390 | AT1G80660.3 | 29.944 | 177 | 94 | 1 | 766 | 912 | 483 | 659 | 1.06e-14 | 79.3 |
| Msa1408390 | AT1G80660.4 | 29.944 | 177 | 94 | 1 | 766 | 912 | 483 | 659 | 1.16e-14 | 79.3 |
| Msa1408390 | AT4G00900.2 | 27.778 | 180 | 96 | 3 | 767 | 912 | 615 | 794 | 1.15e-13 | 76.3 |
| Msa1408390 | AT4G00900.1 | 27.778 | 180 | 96 | 3 | 767 | 912 | 615 | 794 | 1.15e-13 | 76.3 |
| Msa1408390 | AT4G30190.2 | 41.414 | 99 | 51 | 1 | 825 | 923 | 600 | 691 | 3.82e-12 | 71.2 |
Find 197 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATGGTATCCATGATTT+TGG | 0.127712 | tig0023381:-47527 | Msa1408390:intergenic |
| GATACTTTAAATTATTAATT+TGG | 0.147332 | tig0023381:+46233 | Msa1408390:CDS |
| TTCCCCTTTGCTTATTAATA+TGG | 0.161916 | tig0023381:-45942 | Msa1408390:intergenic |
| CTAAATTACATTTGGGCTTT+AGG | 0.167127 | tig0023381:+49872 | Msa1408390:CDS |
| AAATCTGGTCAGCATATTTC+TGG | 0.167463 | tig0023381:-47020 | Msa1408390:intergenic |
| CATGGCTCAAACAGGAATTT+TGG | 0.195063 | tig0023381:+48787 | Msa1408390:CDS |
| TGGGGAAATTGTTGGAGTTT+TGG | 0.216418 | tig0023381:+48820 | Msa1408390:CDS |
| TATATTTGGTGGCAGAATTC+TGG | 0.232874 | tig0023381:+49659 | Msa1408390:intron |
| TTCTATTCTGTTTATGTTGT+TGG | 0.237087 | tig0023381:+46502 | Msa1408390:CDS |
| TAATGGTGACAGGTGATAAT+TGG | 0.244399 | tig0023381:+48915 | Msa1408390:CDS |
| TAAATTATTAATTTGGAGTT+TGG | 0.252288 | tig0023381:+46240 | Msa1408390:CDS |
| AATTAATCAATAAATGTATT+AGG | 0.252625 | tig0023381:+42896 | Msa1408390:five_prime_UTR |
| TATTCTACTTGGCAAGTATT+TGG | 0.258143 | tig0023381:+46594 | Msa1408390:CDS |
| CTGAATAACTTGGAGATTAA+TGG | 0.264775 | tig0023381:+50052 | Msa1408390:CDS |
| TGAGTGTAGGTTATAATCTT+TGG | 0.269067 | tig0023381:-45884 | Msa1408390:intergenic |
| ATTGTCAATATGTTGAATAT+TGG | 0.273141 | tig0023381:+46340 | Msa1408390:CDS |
| ATGAGTTCAATGAAGGTTCT+TGG | 0.287670 | tig0023381:-46124 | Msa1408390:intergenic |
| AAAATTGAACTTAAAATTGA+TGG | 0.308965 | tig0023381:+45974 | Msa1408390:CDS |
| AGGTTACCACCTTGGATTGC+TGG | 0.314307 | tig0023381:+49953 | Msa1408390:CDS |
| ACTATCATCTTCCATGGATT+TGG | 0.319744 | tig0023381:-45705 | Msa1408390:intergenic |
| TCTTATGAAGAGTAACTTAG+AGG | 0.322084 | tig0023381:+49799 | Msa1408390:CDS |
| AATGTCTAAATATGTTTCTA+TGG | 0.322277 | tig0023381:-46062 | Msa1408390:intergenic |
| CTCTTTCAACATGGATATCA+TGG | 0.327399 | tig0023381:+47477 | Msa1408390:CDS |
| GTTCTTGGACCAGTCATATA+AGG | 0.332926 | tig0023381:-46109 | Msa1408390:intergenic |
| ATCGATGACGACGTTCCTTT+AGG | 0.333985 | tig0023381:-43047 | Msa1408390:intergenic |
| ATTGAACTCATTGAATCTTC+AGG | 0.339049 | tig0023381:+46136 | Msa1408390:CDS |
| AAAGAATTTGTGTCTATTGC+AGG | 0.339636 | tig0023381:+48644 | Msa1408390:CDS |
| TACTAAAGTAAAGGAATTGC+AGG | 0.342890 | tig0023381:+49012 | Msa1408390:CDS |
| ATAGCTTGTCCTTGTGCTCT+AGG | 0.346551 | tig0023381:+47599 | Msa1408390:CDS |
| TCCCCTTTGCTTATTAATAT+GGG | 0.351772 | tig0023381:-45941 | Msa1408390:intergenic |
| TGTTCAAAACAAGGAAATAA+TGG | 0.352157 | tig0023381:+48685 | Msa1408390:CDS |
| GTTAGTAAGGTTGCTGTATC+AGG | 0.355494 | tig0023381:-46673 | Msa1408390:intergenic |
| ATGACATGTGCTGCCTGTGC+TGG | 0.357393 | tig0023381:+43119 | Msa1408390:CDS |
| ATTTGGAAGTGTTGGCTAAA+GGG | 0.358609 | tig0023381:+46611 | Msa1408390:CDS |
| TCAACAATGGACTTTGCTAT+TGG | 0.359587 | tig0023381:-48566 | Msa1408390:intergenic |
| TTTGAGCTTGCACTTCAGTT+TGG | 0.367139 | tig0023381:+47560 | Msa1408390:CDS |
| ATATCATTGAACAATCTCTT+AGG | 0.367455 | tig0023381:+46020 | Msa1408390:CDS |
| AATACCAGGTAAACGTTTGA+TGG | 0.367794 | tig0023381:-43156 | Msa1408390:intergenic |
| CTCATTGAATCTTCAGGATC+AGG | 0.369788 | tig0023381:+46142 | Msa1408390:CDS |
| GGTGCTTGGGAATGCATAAA+TGG | 0.370898 | tig0023381:+42957 | Msa1408390:CDS |
| TATACGTCTAAATTACATTT+GGG | 0.371723 | tig0023381:+49865 | Msa1408390:CDS |
| AAGACAGGAACTCTGACTAT+TGG | 0.375068 | tig0023381:+47835 | Msa1408390:CDS |
| GCCTATAAAGCTTTGCGAAA+AGG | 0.386265 | tig0023381:+46430 | Msa1408390:CDS |
| GGTGGTACTGTGAATGAAAA+TGG | 0.387950 | tig0023381:+46901 | Msa1408390:CDS |
| AATGGTGACAGGTGATAATT+GGG | 0.389397 | tig0023381:+48916 | Msa1408390:CDS |
| GAACAAAGTATTTAGAAATC+TGG | 0.389901 | tig0023381:-47035 | Msa1408390:intergenic |
| GTATACGTCTAAATTACATT+TGG | 0.391057 | tig0023381:+49864 | Msa1408390:CDS |
| AACTCTAGATGATGATGATA+AGG | 0.392400 | tig0023381:+46693 | Msa1408390:CDS |
| GGAACAATTATTGATATCAA+TGG | 0.394888 | tig0023381:+42917 | Msa1408390:exon |
| TATAACCTACACTCAACTAA+TGG | 0.394905 | tig0023381:+45892 | Msa1408390:CDS |
| ACTTTAGTAGCTTTAGTCTC+AGG | 0.403729 | tig0023381:-48998 | Msa1408390:intergenic |
| CATGGATTTGTTGATAGCAT+TGG | 0.403773 | tig0023381:+46462 | Msa1408390:CDS |
| ATGGATTTGTTGATAGCATT+GGG | 0.405336 | tig0023381:+46463 | Msa1408390:CDS |
| GATGATAAGGGAAATGTTAT+AGG | 0.408930 | tig0023381:+46706 | Msa1408390:CDS |
| TGAATATTGGATTGCTCATA+AGG | 0.413770 | tig0023381:+46353 | Msa1408390:CDS |
| AAAAGTATGCCAGCAGCAAT+AGG | 0.418214 | tig0023381:-49914 | Msa1408390:intergenic |
| TCACCCTTCATCTTAGCAAC+AGG | 0.419560 | tig0023381:-46868 | Msa1408390:intergenic |
| AATCTGTGAAAGTGCAGTTT+CGG | 0.421667 | tig0023381:-46956 | Msa1408390:intergenic |
| TCATAACATAGCTATTTCAT+TGG | 0.421787 | tig0023381:+48733 | Msa1408390:CDS |
| ATCCCATATTAATAAGCAAA+GGG | 0.425227 | tig0023381:+45939 | Msa1408390:CDS |
| AGACAGGAACTCTGACTATT+GGG | 0.427560 | tig0023381:+47836 | Msa1408390:CDS |
| CTAGCCATTCCTATTGCTGC+TGG | 0.431313 | tig0023381:+49905 | Msa1408390:CDS |
| GGTAACCTAAATCTAGTAGA+AGG | 0.435103 | tig0023381:-49938 | Msa1408390:intergenic |
| CATGTTAAGGTAACAAGGGT+TGG | 0.441522 | tig0023381:+46931 | Msa1408390:CDS |
| ACACCGGTACAGTTTGTCAT+AGG | 0.443143 | tig0023381:+46388 | Msa1408390:CDS |
| TATTTGAAACGAAGTGTTGT+TGG | 0.443830 | tig0023381:-45729 | Msa1408390:intergenic |
| AAAATCACTTCCTTCAAAAT+GGG | 0.444783 | tig0023381:-46542 | Msa1408390:intergenic |
| ATCATCATCTAGAGTTAGTA+AGG | 0.445603 | tig0023381:-46686 | Msa1408390:intergenic |
| TGCATTGTGTTTGATAAGAC+AGG | 0.453034 | tig0023381:+47820 | Msa1408390:CDS |
| TTCTGCTTCTTCAGTTGCTA+AGG | 0.455731 | tig0023381:-45849 | Msa1408390:intergenic |
| GAACAATTATTGATATCAAT+GGG | 0.464501 | tig0023381:+42918 | Msa1408390:exon |
| CATTGAAGATGCTGGATTTG+AGG | 0.464702 | tig0023381:+45682 | Msa1408390:CDS |
| GCTGAAAACATGGCTCAAAC+AGG | 0.465875 | tig0023381:+48779 | Msa1408390:CDS |
| AATGAAAATAAAGAGCATAA+TGG | 0.467111 | tig0023381:+48898 | Msa1408390:CDS |
| TGCATTCATACCCAAAATCA+TGG | 0.468723 | tig0023381:+47516 | Msa1408390:CDS |
| GCCACAATATTTCCAAATGA+TGG | 0.473095 | tig0023381:+46175 | Msa1408390:CDS |
| TGTGTGCACTTTCTAATGCT+TGG | 0.473648 | tig0023381:-47694 | Msa1408390:intergenic |
| TATTTGGAAGTGTTGGCTAA+AGG | 0.475035 | tig0023381:+46610 | Msa1408390:CDS |
| CAGCTCTTCAATCCCTTCGT+GGG | 0.479337 | tig0023381:+45807 | Msa1408390:CDS |
| TGGCAAGTATTTGGAAGTGT+TGG | 0.481436 | tig0023381:+46603 | Msa1408390:CDS |
| CTCAAATCCAGCATCTTCAA+TGG | 0.486228 | tig0023381:-45681 | Msa1408390:intergenic |
| TCAGCTCTTCAATCCCTTCG+TGG | 0.486525 | tig0023381:+45806 | Msa1408390:CDS |
| TTGGATTGCTGGAGCTGCAA+TGG | 0.487123 | tig0023381:+49964 | Msa1408390:CDS |
| ACTCTAGATGATGATGATAA+GGG | 0.488843 | tig0023381:+46694 | Msa1408390:CDS |
| GCACTAGTAGCAGCTGATGT+TGG | 0.489521 | tig0023381:+49725 | Msa1408390:CDS |
| TGGATATCATGGTTTGTAGC+TGG | 0.490244 | tig0023381:+47488 | Msa1408390:CDS |
| ACAAGCTATCGCGAAACTCA+TGG | 0.491462 | tig0023381:+46642 | Msa1408390:CDS |
| GTTGGAACTATCATCTTCCA+TGG | 0.493276 | tig0023381:-45711 | Msa1408390:intergenic |
| TCCAAGTTATTCAGCTTGGT+TGG | 0.493343 | tig0023381:-50043 | Msa1408390:intergenic |
| TAAAGGAACGTCGTCATCGA+TGG | 0.493470 | tig0023381:+43049 | Msa1408390:CDS |
| AATCTCCAAGTTATTCAGCT+TGG | 0.494811 | tig0023381:-50047 | Msa1408390:intergenic |
| TGCTATTTGCACCCCACGAA+GGG | 0.498106 | tig0023381:-45819 | Msa1408390:intergenic |
| ACCAACCAAGCTGAATAACT+TGG | 0.498362 | tig0023381:+50042 | Msa1408390:CDS |
| CGTGAGGCCATTGAAGATGC+TGG | 0.500885 | tig0023381:+45674 | Msa1408390:CDS |
| ACCATCATTTGGAAATATTG+TGG | 0.502032 | tig0023381:-46176 | Msa1408390:intergenic |
| GTTGGAATGGCAATTGGTGC+TGG | 0.502064 | tig0023381:+49743 | Msa1408390:CDS |
| ACTTATAAACCTTATATGAC+TGG | 0.504265 | tig0023381:+46100 | Msa1408390:CDS |
| AATTCTATTGCTAGACAAGC+TGG | 0.504479 | tig0023381:+48947 | Msa1408390:CDS |
| TCATTGGATGGGGAAATTGT+TGG | 0.506185 | tig0023381:+48812 | Msa1408390:CDS |
| ACTTGTTGAGTCTGCTCAGA+TGG | 0.506554 | tig0023381:+46984 | Msa1408390:CDS |
| AAGAGCTGATTGCACATTGG+AGG | 0.507470 | tig0023381:-45792 | Msa1408390:intergenic |
| GCTGATGTTGGAATGGCAAT+TGG | 0.508224 | tig0023381:+49737 | Msa1408390:CDS |
| TCAAAACTATTCATAGAAGA+TGG | 0.509674 | tig0023381:-47542 | Msa1408390:intergenic |
| AGCCACTCCTACAGCGGTCA+TGG | 0.513949 | tig0023381:+47625 | Msa1408390:CDS |
| TGGTCAGCATATTTCTGGAC+AGG | 0.517073 | tig0023381:-47015 | Msa1408390:intergenic |
| CTAGATTTAGGTTACCACCT+TGG | 0.517511 | tig0023381:+49945 | Msa1408390:CDS |
| AAAGCCTGTTGCTAAGATGA+AGG | 0.517726 | tig0023381:+46864 | Msa1408390:CDS |
| GTGAAAGAGAAATTGATAGC+AGG | 0.519960 | tig0023381:+46728 | Msa1408390:CDS |
| GTCATGGTTGGTACCGGAGT+TGG | 0.522797 | tig0023381:+47641 | Msa1408390:CDS |
| GTAAATGAGAGTATGATAAC+TGG | 0.523529 | tig0023381:+46835 | Msa1408390:CDS |
| AACGCAGAAAACAACAGTTA+TGG | 0.524614 | tig0023381:-43090 | Msa1408390:intergenic |
| GGATACACTGTAGGAATGGT+AGG | 0.525626 | tig0023381:+49680 | Msa1408390:CDS |
| AGATTCAATGAGTTCAATGA+AGG | 0.527436 | tig0023381:-46131 | Msa1408390:intergenic |
| GACTAAAGCTACTAAAGTAA+AGG | 0.529942 | tig0023381:+49003 | Msa1408390:CDS |
| TTTCTATGGTTTCAACACCT+TGG | 0.531148 | tig0023381:-46048 | Msa1408390:intergenic |
| ACAGCGGTCATGGTTGGTAC+CGG | 0.534259 | tig0023381:+47635 | Msa1408390:CDS |
| CAAAACAAGGAAATAATGGT+TGG | 0.535760 | tig0023381:+48689 | Msa1408390:CDS |
| TGTCTTGAATGATAAAGCTC+AGG | 0.535973 | tig0023381:+43196 | Msa1408390:CDS |
| ACATCAGCTGCTACTAGTGC+TGG | 0.539899 | tig0023381:-49722 | Msa1408390:intergenic |
| TGATGTGATCAAAGTTGTGC+CGG | 0.544422 | tig0023381:+46765 | Msa1408390:CDS |
| ACGTCGTCATCGATGGAAGA+AGG | 0.548274 | tig0023381:+43056 | Msa1408390:CDS |
| ATAAAGAGCATAATGGTGAC+AGG | 0.549153 | tig0023381:+48905 | Msa1408390:CDS |
| TATACTCACGTTAACAATGG+TGG | 0.551153 | tig0023381:-43231 | Msa1408390:intergenic |
| TCTAAAACATCTTTAACTCC+AGG | 0.552204 | tig0023381:-46310 | Msa1408390:intergenic |
| AGTTTCCATTAGTTGAGTGT+AGG | 0.555320 | tig0023381:-45897 | Msa1408390:intergenic |
| GATAGTGTGACTCAGGTGAC+AGG | 0.555624 | tig0023381:-43007 | Msa1408390:intergenic |
| TTCTGGATACACTGTAGGAA+TGG | 0.557596 | tig0023381:+49676 | Msa1408390:CDS |
| AATCCCATATTAATAAGCAA+AGG | 0.557696 | tig0023381:+45938 | Msa1408390:CDS |
| GATGGAAGAAGGCTCAGAGC+TGG | 0.560671 | tig0023381:+43067 | Msa1408390:CDS |
| ATGAAGGGTGATATAGTGAT+TGG | 0.560992 | tig0023381:+46880 | Msa1408390:CDS |
| AAAGCCATCAAACGTTTACC+TGG | 0.561493 | tig0023381:+43152 | Msa1408390:CDS |
| CAGAATTCTGGATACACTGT+AGG | 0.561507 | tig0023381:+49671 | Msa1408390:intron |
| GCGAAAAGGTTATGCAAACA+TGG | 0.566585 | tig0023381:+46444 | Msa1408390:CDS |
| TCAGTTTGGAATTTCAGTCA+TGG | 0.566870 | tig0023381:+47574 | Msa1408390:CDS |
| ACAACAGCCTCTCGAATACC+AGG | 0.568117 | tig0023381:-43170 | Msa1408390:intergenic |
| GTGGCTAGGCCTAGAGCACA+AGG | 0.569251 | tig0023381:-47608 | Msa1408390:intergenic |
| ACCTTGAGTTGCACCAACTC+CGG | 0.571323 | tig0023381:-47654 | Msa1408390:intergenic |
| TTTGTGTCTATTGCAGGACA+TGG | 0.575380 | tig0023381:+48650 | Msa1408390:CDS |
| TTAGGATATGTCGTCATCGA+CGG | 0.577012 | tig0023381:-43029 | Msa1408390:intergenic |
| ACCGGAGTTGGTGCAACTCA+AGG | 0.578148 | tig0023381:+47653 | Msa1408390:CDS |
| TTGTGTTATCTCTTTCAACA+TGG | 0.578715 | tig0023381:+47468 | Msa1408390:CDS |
| TATTGGATTGCTCATAAGGT+GGG | 0.578981 | tig0023381:+46357 | Msa1408390:CDS |
| AGCATTAGAAAGTGCACACA+AGG | 0.580174 | tig0023381:+47697 | Msa1408390:CDS |
| ATACTCACGTTAACAATGGT+GGG | 0.582389 | tig0023381:-43230 | Msa1408390:intergenic |
| ACTAGCAGAAGCTGAAAACA+TGG | 0.583541 | tig0023381:+48769 | Msa1408390:CDS |
| AGTAGCAGCTGATGTTGGAA+TGG | 0.584059 | tig0023381:+49730 | Msa1408390:CDS |
| GGGTTACACTTGCAGTGCTG+TGG | 0.586770 | tig0023381:+42981 | Msa1408390:CDS |
| AAGGGTGATATAGTGATTGG+TGG | 0.589515 | tig0023381:+46883 | Msa1408390:CDS |
| CTTCCTATGACAAACTGTAC+CGG | 0.598308 | tig0023381:-46391 | Msa1408390:intergenic |
| TCATTGAATCTTCAGGATCA+GGG | 0.598992 | tig0023381:+46143 | Msa1408390:CDS |
| AACCATGACCGCTGTAGGAG+TGG | 0.599538 | tig0023381:-47627 | Msa1408390:intergenic |
| GGTTACACTTGCAGTGCTGT+GGG | 0.600608 | tig0023381:+42982 | Msa1408390:CDS |
| ACAATATTTCCAAATGATGG+TGG | 0.600705 | tig0023381:+46178 | Msa1408390:CDS |
| TTGAAGAGCTGATTGCACAT+TGG | 0.601857 | tig0023381:-45795 | Msa1408390:intergenic |
| TGACCGCTGTAGGAGTGGCT+AGG | 0.602822 | tig0023381:-47622 | Msa1408390:intergenic |
| TGGATTTGAGGCCAAATCCA+TGG | 0.603953 | tig0023381:+45694 | Msa1408390:CDS |
| TGGGGTGCAAATAGCACAAG+TGG | 0.611430 | tig0023381:+45826 | Msa1408390:CDS |
| ACTGTAGGAATGGTAGGAGA+TGG | 0.612600 | tig0023381:+49686 | Msa1408390:CDS |
| CAAGGTGTGTTGATCAAAGG+TGG | 0.614870 | tig0023381:+47671 | Msa1408390:CDS |
| ATGGTTCTTATGTATATACC+TGG | 0.615086 | tig0023381:+46292 | Msa1408390:CDS |
| ACTCCTACAGCGGTCATGGT+TGG | 0.617392 | tig0023381:+47629 | Msa1408390:CDS |
| CTTGGGAATGCATAAATGGA+GGG | 0.618666 | tig0023381:+42961 | Msa1408390:CDS |
| AAGCCTGTTGCTAAGATGAA+GGG | 0.619669 | tig0023381:+46865 | Msa1408390:CDS |
| TCTGATGCTACTTTCGCGCC+CGG | 0.621662 | tig0023381:-46784 | Msa1408390:intergenic |
| ATTGCAGCTCCAGCAATCCA+AGG | 0.621783 | tig0023381:-49962 | Msa1408390:intergenic |
| TATTGAAACTGTCATGGCTG+AGG | 0.621886 | tig0023381:+48970 | Msa1408390:CDS |
| TCGATGACGACATATCCTAA+AGG | 0.622723 | tig0023381:+43032 | Msa1408390:CDS |
| ATCGACGGATAGTGTGACTC+AGG | 0.623312 | tig0023381:-43014 | Msa1408390:intergenic |
| GGCGCGAAAGTAGCATCAGA+TGG | 0.625314 | tig0023381:+46787 | Msa1408390:CDS |
| GATGTGATCAAAGTTGTGCC+GGG | 0.629015 | tig0023381:+46766 | Msa1408390:CDS |
| GTGCTATTTGCACCCCACGA+AGG | 0.629621 | tig0023381:-45820 | Msa1408390:intergenic |
| AGCTCTTCAATCCCTTCGTG+GGG | 0.630501 | tig0023381:+45808 | Msa1408390:CDS |
| AAGAAAAGCACATAAACAAG+AGG | 0.631153 | tig0023381:+46201 | Msa1408390:CDS |
| ATATTGGATTGCTCATAAGG+TGG | 0.633640 | tig0023381:+46356 | Msa1408390:CDS |
| TTTCTCAACAGATCCAGCAC+AGG | 0.634499 | tig0023381:-43132 | Msa1408390:intergenic |
| GTACCAACCATGACCGCTGT+AGG | 0.635820 | tig0023381:-47632 | Msa1408390:intergenic |
| CAAATATGTAGAGTACACAT+AGG | 0.636295 | tig0023381:+45746 | Msa1408390:CDS |
| TATTGCAGGACATGGAGTGA+AGG | 0.637874 | tig0023381:+48658 | Msa1408390:CDS |
| TATGCCAGCAGCAATAGGAA+TGG | 0.645015 | tig0023381:-49909 | Msa1408390:intergenic |
| GAAGGCAGTTGTTCAAAACA+AGG | 0.645068 | tig0023381:+48676 | Msa1408390:CDS |
| ACATATACTCACGTTAACAA+TGG | 0.647817 | tig0023381:-43234 | Msa1408390:intergenic |
| AGGCCTAGCCACTCCTACAG+CGG | 0.649430 | tig0023381:+47619 | Msa1408390:CDS |
| TGAGAGTATGATAACTGGTG+AGG | 0.650053 | tig0023381:+46840 | Msa1408390:CDS |
| ACGTTTACCTGGTATTCGAG+AGG | 0.650760 | tig0023381:+43163 | Msa1408390:CDS |
| CAATCTCTTAGGACACTCCA+AGG | 0.653190 | tig0023381:+46031 | Msa1408390:CDS |
| TTTGCATGTTAAGGTAACAA+GGG | 0.654335 | tig0023381:+46927 | Msa1408390:CDS |
| ACTCAAGGTGTGTTGATCAA+AGG | 0.657349 | tig0023381:+47668 | Msa1408390:CDS |
| ATGGAAACTATATCAAACAC+AGG | 0.661215 | tig0023381:+45911 | Msa1408390:CDS |
| AGCTGGTATTGAAACTGTCA+TGG | 0.661486 | tig0023381:+48964 | Msa1408390:CDS |
| GCTTGGGAATGCATAAATGG+AGG | 0.664067 | tig0023381:+42960 | Msa1408390:CDS |
| TCCCATATTAATAAGCAAAG+GGG | 0.670647 | tig0023381:+45940 | Msa1408390:CDS |
| ATATGTAGAGTACACATAGG+TGG | 0.685983 | tig0023381:+45749 | Msa1408390:CDS |
| TCTGACTATTGGGAAGCCAG+TGG | 0.686617 | tig0023381:+47846 | Msa1408390:CDS |
| ACAGGAAGAGAGCATACGTG+AGG | 0.715485 | tig0023381:+45658 | Msa1408390:intron |
| ATGAACAAAATCATTCATCG+TGG | 0.730504 | tig0023381:+48612 | Msa1408390:CDS |
| GCAGCTCCAGCAATCCAAGG+TGG | 0.740644 | tig0023381:-49959 | Msa1408390:intergenic |
| ATGGTGACAGGTGATAATTG+GGG | 0.767964 | tig0023381:+48917 | Msa1408390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATCAATAAATGTATT+AGG | + | tig0023381:42896-42915 | Msa1408390:five_prime_UTR | 10.0% |
| !!! | ATTTTTATTATAATGTTTCT+TGG | + | tig0023381:43312-43331 | Msa1408390:intron | 10.0% |
| !!! | AATTTTTTTATTTAGATTGT+CGG | + | tig0023381:43725-43744 | Msa1408390:intron | 10.0% |
| !! | ATATTTATTATAATGTTTCT+TGG | + | tig0023381:44145-44164 | Msa1408390:intron | 10.0% |
| !!! | TTAATTATTTTTTAGATTGT+AGG | + | tig0023381:44542-44561 | Msa1408390:intron | 10.0% |
| !!! | TATTGATTTTTTTTCTTTTT+TGG | + | tig0023381:44907-44926 | Msa1408390:intron | 10.0% |
| !!! | AGATTTTTCAATTAATAAAA+AGG | - | tig0023381:44976-44995 | Msa1408390:intergenic | 10.0% |
| !!! | TAATTTGTTTTTTTTTTTGT+TGG | - | tig0023381:45073-45092 | Msa1408390:intergenic | 10.0% |
| !!! | TTATATTTTTTAGTAGATAA+CGG | + | tig0023381:45587-45606 | Msa1408390:intron | 10.0% |
| !! | GATACTTTAAATTATTAATT+TGG | + | tig0023381:46233-46252 | Msa1408390:CDS | 10.0% |
| !!! | TTAATTATTTCAGTTAATTT+TGG | + | tig0023381:47126-47145 | Msa1408390:intron | 10.0% |
| !! | ATTCTATTATTTGAATTAAA+TGG | - | tig0023381:47406-47425 | Msa1408390:intergenic | 10.0% |
| !! | ATATACTATATAGATTAAAT+TGG | + | tig0023381:48357-48376 | Msa1408390:intron | 10.0% |
| !! | TATACTATATAGATTAAATT+GGG | + | tig0023381:48358-48377 | Msa1408390:intron | 10.0% |
| !!! | TTAGAAAAAAGCTTTAAAAA+AGG | + | tig0023381:42846-42865 | Msa1408390:five_prime_UTR | 15.0% |
| !! | AGAAAAACAATACTTAAAAA+GGG | - | tig0023381:43818-43837 | Msa1408390:intergenic | 15.0% |
| !! | AAGAAAAACAATACTTAAAA+AGG | - | tig0023381:43819-43838 | Msa1408390:intergenic | 15.0% |
| !!! | CAATTAAAATGAAACAATTT+TGG | - | tig0023381:43843-43862 | Msa1408390:intergenic | 15.0% |
| !!! | GAATATAGATTAGTTTATTT+AGG | - | tig0023381:43936-43955 | Msa1408390:intergenic | 15.0% |
| !! | AGAAAAACAATACTTAAAAA+GGG | - | tig0023381:43818-43837 | Msa1408390:intergenic | 15.0% |
| !! | AAGAAAAACAATACTTAAAA+AGG | - | tig0023381:43819-43838 | Msa1408390:intergenic | 15.0% |
| !!! | AATAGTATTTCGTATATTTT+AGG | - | tig0023381:44705-44724 | Msa1408390:intergenic | 15.0% |
| !! | AATATAAATATGCCAATTAT+AGG | - | tig0023381:45574-45593 | Msa1408390:intergenic | 15.0% |
| !! | AAAATTGAACTTAAAATTGA+TGG | + | tig0023381:45974-45993 | Msa1408390:CDS | 15.0% |
| !!! | TAAATTATTAATTTGGAGTT+TGG | + | tig0023381:46240-46259 | Msa1408390:CDS | 15.0% |
| !! | TTTAAAGATCAAAAACATAA+GGG | - | tig0023381:47104-47123 | Msa1408390:intergenic | 15.0% |
| !! | ATTTAAAGATCAAAAACATA+AGG | - | tig0023381:47105-47124 | Msa1408390:intergenic | 15.0% |
| !! | ATAGTTATATCTATATGATT+AGG | + | tig0023381:48529-48548 | Msa1408390:intron | 15.0% |
| !! | ATTCAAACAAAAAAAACTTA+CGG | - | tig0023381:49166-49185 | Msa1408390:intergenic | 15.0% |
| !! | AATCTAAACAAAATATTTAG+TGG | + | tig0023381:49317-49336 | Msa1408390:intron | 15.0% |
| !! | ATCTAAACAAAATATTTAGT+GGG | + | tig0023381:49318-49337 | Msa1408390:intron | 15.0% |
| !! | AAAAATTGAATGAAAAATGA+AGG | - | tig0023381:49507-49526 | Msa1408390:intergenic | 15.0% |
| !!! | ATATAGGGTTAATATATTTT+TGG | - | tig0023381:49603-49622 | Msa1408390:intergenic | 15.0% |
| !! | AGTTATTTGACATATATATT+TGG | + | tig0023381:49645-49664 | Msa1408390:intron | 15.0% |
| !! | GAACAATTATTGATATCAAT+GGG | + | tig0023381:42918-42937 | Msa1408390:exon | 20.0% |
| !! | AGACACATAAAATTTCAATT+CGG | - | tig0023381:43356-43375 | Msa1408390:intergenic | 20.0% |
| !!! | CAATTAAAATGAAACAGTTT+TGG | - | tig0023381:44656-44675 | Msa1408390:intergenic | 20.0% |
| !!! | CGAAATACTATTTTTTTAGA+AGG | + | tig0023381:44713-44732 | Msa1408390:intron | 20.0% |
| !! | ATTCCAAAAAAAGTTATCAT+GGG | - | tig0023381:45155-45174 | Msa1408390:intergenic | 20.0% |
| !!! | AATGTCTAAATATGTTTCTA+TGG | - | tig0023381:46065-46084 | Msa1408390:intergenic | 20.0% |
| !! | ATTGTCAATATGTTGAATAT+TGG | + | tig0023381:46340-46359 | Msa1408390:CDS | 20.0% |
| !!! | CTTATTTCTTTTATTCTACT+TGG | + | tig0023381:46583-46602 | Msa1408390:CDS | 20.0% |
| !!! | ATTATTTCAGTTAATTTTGG+AGG | + | tig0023381:47129-47148 | Msa1408390:intron | 20.0% |
| !!! | AAAATTGATTTTAACATGTG+TGG | - | tig0023381:47180-47199 | Msa1408390:intergenic | 20.0% |
| !! | TTAGTCTATTTGGAAATTAA+TGG | + | tig0023381:48471-48490 | Msa1408390:intron | 20.0% |
| !!! | AATGAAAATAAAGAGCATAA+TGG | + | tig0023381:48898-48917 | Msa1408390:CDS | 20.0% |
| !! | AACTCATATTTAAACCAAAA+AGG | - | tig0023381:49112-49131 | Msa1408390:intergenic | 20.0% |
| !! | TTCAAACAAAAAAAACTTAC+GGG | - | tig0023381:49165-49184 | Msa1408390:intergenic | 20.0% |
| !! | AATCTTTACAAATTCAAACA+CGG | - | tig0023381:49296-49315 | Msa1408390:intergenic | 20.0% |
| !!! | ATTGCAAATTTTTTTGAACT+CGG | - | tig0023381:49456-49475 | Msa1408390:intergenic | 20.0% |
| !! | GATTGTCTAAAGATTATATA+GGG | - | tig0023381:49618-49637 | Msa1408390:intergenic | 20.0% |
| !! | AGATTGTCTAAAGATTATAT+AGG | - | tig0023381:49619-49638 | Msa1408390:intergenic | 20.0% |
| !! | TATTTGACATATATATTTGG+TGG | + | tig0023381:49648-49667 | Msa1408390:intron | 20.0% |
| !! | TATACGTCTAAATTACATTT+GGG | + | tig0023381:49865-49884 | Msa1408390:CDS | 20.0% |
| ! | GGAACAATTATTGATATCAA+TGG | + | tig0023381:42917-42936 | Msa1408390:exon | 25.0% |
| ! | CAAGTGTGTGTATATATAAT+TGG | - | tig0023381:43631-43650 | Msa1408390:intergenic | 25.0% |
| ! | GATAGAGAAATAATTGTCAT+TGG | + | tig0023381:44045-44064 | Msa1408390:intron | 25.0% |
| !! | TTTCTCTAAGAGATTACTTA+TGG | + | tig0023381:44214-44233 | Msa1408390:intron | 25.0% |
| ! | GTAGTGTGTGTATATATAAT+TGG | - | tig0023381:44419-44438 | Msa1408390:intergenic | 25.0% |
| ! | AACAATACTTAAAAAGGGAA+CGG | - | tig0023381:43813-43832 | Msa1408390:intergenic | 25.0% |
| ! | TACCTCAAAATATAATCTAG+AGG | + | tig0023381:45091-45110 | Msa1408390:intron | 25.0% |
| !! | TTCCTCTAGATTATATTTTG+AGG | - | tig0023381:45096-45115 | Msa1408390:intergenic | 25.0% |
| ! | AAAAAAAGTTATCATGGGAA+TGG | - | tig0023381:45150-45169 | Msa1408390:intergenic | 25.0% |
| !!! | ATTCCCATGATAACTTTTTT+TGG | + | tig0023381:45149-45168 | Msa1408390:intron | 25.0% |
| ! | GATTCCAAAAAAAGTTATCA+TGG | - | tig0023381:45156-45175 | Msa1408390:intergenic | 25.0% |
| !!! | TAAGAGGAATTCTTTTGATT+TGG | - | tig0023381:45260-45279 | Msa1408390:intergenic | 25.0% |
| !! | ATAGTTAGGATGAATTGTTT+TGG | - | tig0023381:45419-45438 | Msa1408390:intergenic | 25.0% |
| ! | ACAAAATATATGCGTTGTTA+TGG | - | tig0023381:45636-45655 | Msa1408390:intergenic | 25.0% |
| ! | AATCCCATATTAATAAGCAA+AGG | + | tig0023381:45938-45957 | Msa1408390:CDS | 25.0% |
| ! | ATCCCATATTAATAAGCAAA+GGG | + | tig0023381:45939-45958 | Msa1408390:CDS | 25.0% |
| ! | ATATCATTGAACAATCTCTT+AGG | + | tig0023381:46020-46039 | Msa1408390:CDS | 25.0% |
| ! | ACTTATAAACCTTATATGAC+TGG | + | tig0023381:46100-46119 | Msa1408390:CDS | 25.0% |
| !!! | TCCTGTTTTTTTAACATCTA+TGG | + | tig0023381:46273-46292 | Msa1408390:CDS | 25.0% |
| ! | ACCATAGATGTTAAAAAAAC+AGG | - | tig0023381:46277-46296 | Msa1408390:intergenic | 25.0% |
| !! | ATAGGAAGAAGATTTTATGT+TGG | + | tig0023381:46406-46425 | Msa1408390:CDS | 25.0% |
| ! | TTCTATTCTGTTTATGTTGT+TGG | + | tig0023381:46502-46521 | Msa1408390:CDS | 25.0% |
| ! | AAAATCACTTCCTTCAAAAT+GGG | - | tig0023381:46545-46564 | Msa1408390:intergenic | 25.0% |
| ! | AAAAATCACTTCCTTCAAAA+TGG | - | tig0023381:46546-46565 | Msa1408390:intergenic | 25.0% |
| !! | GAACAAAGTATTTAGAAATC+TGG | - | tig0023381:47038-47057 | Msa1408390:intergenic | 25.0% |
| ! | CAGTAATTTAGACTTACTAT+AGG | - | tig0023381:47060-47079 | Msa1408390:intergenic | 25.0% |
| !!! | TCTAGTTTTTGCAAAAATCA+CGG | - | tig0023381:47302-47321 | Msa1408390:intergenic | 25.0% |
| ! | TCAAAACTATTCATAGAAGA+TGG | - | tig0023381:47545-47564 | Msa1408390:intergenic | 25.0% |
| ! | TTGAAATTTATCTGCATTCA+GGG | - | tig0023381:48082-48101 | Msa1408390:intergenic | 25.0% |
| !! | TTTGAAATTTATCTGCATTC+AGG | - | tig0023381:48083-48102 | Msa1408390:intergenic | 25.0% |
| !! | TACTTTAGAGATTAAAACGA+TGG | + | tig0023381:48304-48323 | Msa1408390:intron | 25.0% |
| !! | TTCATCTTGTGTGATATTTT+TGG | - | tig0023381:48597-48616 | Msa1408390:intergenic | 25.0% |
| ! | TGTTCAAAACAAGGAAATAA+TGG | + | tig0023381:48685-48704 | Msa1408390:CDS | 25.0% |
| !! | TCATAACATAGCTATTTCAT+TGG | + | tig0023381:48733-48752 | Msa1408390:CDS | 25.0% |
| ! | CATATTTAAACCAAAAAGGA+GGG | - | tig0023381:49108-49127 | Msa1408390:intergenic | 25.0% |
| ! | TCATATTTAAACCAAAAAGG+AGG | - | tig0023381:49109-49128 | Msa1408390:intergenic | 25.0% |
| ! | TCAAACAAAAAAAACTTACG+GGG | - | tig0023381:49164-49183 | Msa1408390:intergenic | 25.0% |
| ! | GTATACGTCTAAATTACATT+TGG | + | tig0023381:49864-49883 | Msa1408390:CDS | 25.0% |
| !! | TTTTTCCTTCTACTAGATTT+AGG | + | tig0023381:49933-49952 | Msa1408390:CDS | 25.0% |
| !! | TAAAAAGTTTGATGGTGCTT+GGG | + | tig0023381:42944-42963 | Msa1408390:CDS | 30.0% |
| ACATATACTCACGTTAACAA+TGG | - | tig0023381:43237-43256 | Msa1408390:intergenic | 30.0% | |
| ! | TATAATGTTTCTTGGCTCTT+AGG | + | tig0023381:43320-43339 | Msa1408390:intron | 30.0% |
| ! | TTTCTCTAGGAGATTACTTA+TGG | + | tig0023381:43381-43400 | Msa1408390:intron | 30.0% |
| ATACTTAAAAAGGGAACGAA+TGG | - | tig0023381:43809-43828 | Msa1408390:intergenic | 30.0% | |
| ! | TATAATGTTTCTTGGCTCTT+AGG | + | tig0023381:43320-43339 | Msa1408390:intron | 30.0% |
| ! | ATCTTGCATCTGATTAGTTA+AGG | + | tig0023381:44464-44483 | Msa1408390:intron | 30.0% |
| ! | CGATCAAATTTTCAACTCAA+AGG | - | tig0023381:45202-45221 | Msa1408390:intergenic | 30.0% |
| CAAGTGTTTAGGAGTAATTT+CGG | - | tig0023381:45349-45368 | Msa1408390:intergenic | 30.0% | |
| TTCATCCTAACTATTCGTTT+AGG | + | tig0023381:45425-45444 | Msa1408390:intron | 30.0% | |
| AGTTACCTAAACGAATAGTT+AGG | - | tig0023381:45433-45452 | Msa1408390:intergenic | 30.0% | |
| CAAATTTGCACATCTTAGAA+AGG | + | tig0023381:45495-45514 | Msa1408390:intron | 30.0% | |
| ! | AACGCATATATTTTGTACAC+AGG | + | tig0023381:45640-45659 | Msa1408390:intron | 30.0% |
| !! | TATTTGAAACGAAGTGTTGT+TGG | - | tig0023381:45732-45751 | Msa1408390:intergenic | 30.0% |
| CAAATATGTAGAGTACACAT+AGG | + | tig0023381:45746-45765 | Msa1408390:CDS | 30.0% | |
| TGAGTGTAGGTTATAATCTT+TGG | - | tig0023381:45887-45906 | Msa1408390:intergenic | 30.0% | |
| TATAACCTACACTCAACTAA+TGG | + | tig0023381:45892-45911 | Msa1408390:CDS | 30.0% | |
| ATGGAAACTATATCAAACAC+AGG | + | tig0023381:45911-45930 | Msa1408390:CDS | 30.0% | |
| TCCCATATTAATAAGCAAAG+GGG | + | tig0023381:45940-45959 | Msa1408390:CDS | 30.0% | |
| TCCCCTTTGCTTATTAATAT+GGG | - | tig0023381:45944-45963 | Msa1408390:intergenic | 30.0% | |
| TTCCCCTTTGCTTATTAATA+TGG | - | tig0023381:45945-45964 | Msa1408390:intergenic | 30.0% | |
| AGATTCAATGAGTTCAATGA+AGG | - | tig0023381:46134-46153 | Msa1408390:intergenic | 30.0% | |
| ATTGAACTCATTGAATCTTC+AGG | + | tig0023381:46136-46155 | Msa1408390:CDS | 30.0% | |
| ACCATCATTTGGAAATATTG+TGG | - | tig0023381:46179-46198 | Msa1408390:intergenic | 30.0% | |
| ACAATATTTCCAAATGATGG+TGG | + | tig0023381:46178-46197 | Msa1408390:CDS | 30.0% | |
| ! | AAGAAAAGCACATAAACAAG+AGG | + | tig0023381:46201-46220 | Msa1408390:CDS | 30.0% |
| ATGGTTCTTATGTATATACC+TGG | + | tig0023381:46292-46311 | Msa1408390:CDS | 30.0% | |
| ! | TCTAAAACATCTTTAACTCC+AGG | - | tig0023381:46313-46332 | Msa1408390:intergenic | 30.0% |
| !! | TGGAGTTAAAGATGTTTTAG+AGG | + | tig0023381:46312-46331 | Msa1408390:CDS | 30.0% |
| TGAATATTGGATTGCTCATA+AGG | + | tig0023381:46353-46372 | Msa1408390:CDS | 30.0% | |
| !! | ATGGATTTGTTGATAGCATT+GGG | + | tig0023381:46463-46482 | Msa1408390:CDS | 30.0% |
| ! | ACATTTTCTTCCCATTTTGA+AGG | + | tig0023381:46532-46551 | Msa1408390:CDS | 30.0% |
| TATTCTACTTGGCAAGTATT+TGG | + | tig0023381:46594-46613 | Msa1408390:CDS | 30.0% | |
| ! | ATCATCATCTAGAGTTAGTA+AGG | - | tig0023381:46689-46708 | Msa1408390:intergenic | 30.0% |
| ! | AACTCTAGATGATGATGATA+AGG | + | tig0023381:46693-46712 | Msa1408390:CDS | 30.0% |
| ! | ACTCTAGATGATGATGATAA+GGG | + | tig0023381:46694-46713 | Msa1408390:CDS | 30.0% |
| GATGATAAGGGAAATGTTAT+AGG | + | tig0023381:46706-46725 | Msa1408390:CDS | 30.0% | |
| !!! | ATCAGATGGTTTTGTTGTTT+GGG | + | tig0023381:46801-46820 | Msa1408390:CDS | 30.0% |
| ! | GTAAATGAGAGTATGATAAC+TGG | + | tig0023381:46835-46854 | Msa1408390:CDS | 30.0% |
| ! | AAATGGTGTTTTGCATGTTA+AGG | + | tig0023381:46918-46937 | Msa1408390:CDS | 30.0% |
| ! | TTTTGCATGTTAAGGTAACA+AGG | + | tig0023381:46926-46945 | Msa1408390:CDS | 30.0% |
| TTTGCATGTTAAGGTAACAA+GGG | + | tig0023381:46927-46946 | Msa1408390:CDS | 30.0% | |
| ACATGTACACAGTGTATATT+TGG | - | tig0023381:47240-47259 | Msa1408390:intergenic | 30.0% | |
| ATATACACTGTGTACATGTT+TGG | + | tig0023381:47241-47260 | Msa1408390:intron | 30.0% | |
| ATAAAGCTTCAATGAAATCC+CGG | + | tig0023381:47324-47343 | Msa1408390:intron | 30.0% | |
| TTGTGTTATCTCTTTCAACA+TGG | + | tig0023381:47468-47487 | Msa1408390:CDS | 30.0% | |
| ! | AAGATGGTATCCATGATTTT+GGG | - | tig0023381:47529-47548 | Msa1408390:intergenic | 30.0% |
| TGAGTTTCCTAATGTTGAAA+TGG | - | tig0023381:47772-47791 | Msa1408390:intergenic | 30.0% | |
| CAATTGACTAAAGTGACTAA+CGG | - | tig0023381:48169-48188 | Msa1408390:intergenic | 30.0% | |
| TCTCTGCTATTAAGATGTTA+TGG | + | tig0023381:48259-48278 | Msa1408390:intron | 30.0% | |
| !!! | ATTTTTGGCATGATCAACAA+TGG | - | tig0023381:48582-48601 | Msa1408390:intergenic | 30.0% |
| ATGAACAAAATCATTCATCG+TGG | + | tig0023381:48612-48631 | Msa1408390:CDS | 30.0% | |
| AAAGAATTTGTGTCTATTGC+AGG | + | tig0023381:48644-48663 | Msa1408390:CDS | 30.0% | |
| CAAAACAAGGAAATAATGGT+TGG | + | tig0023381:48689-48708 | Msa1408390:CDS | 30.0% | |
| !! | AACAGGAATTTTGGTATCAT+TGG | + | tig0023381:48796-48815 | Msa1408390:CDS | 30.0% |
| !! | GAATTTTGGTATCATTGGAT+GGG | + | tig0023381:48801-48820 | Msa1408390:CDS | 30.0% |
| !! | AATTTTGGTATCATTGGATG+GGG | + | tig0023381:48802-48821 | Msa1408390:CDS | 30.0% |
| ! | GAAATAACTTCTTTTGCATC+AGG | - | tig0023381:48866-48885 | Msa1408390:intergenic | 30.0% |
| GACTAAAGCTACTAAAGTAA+AGG | + | tig0023381:49003-49022 | Msa1408390:CDS | 30.0% | |
| TACTAAAGTAAAGGAATTGC+AGG | + | tig0023381:49012-49031 | Msa1408390:CDS | 30.0% | |
| AAAGCAACAATTTGGGAATT+GGG | - | tig0023381:49057-49076 | Msa1408390:intergenic | 30.0% | |
| TAAAGCAACAATTTGGGAAT+TGG | - | tig0023381:49058-49077 | Msa1408390:intergenic | 30.0% | |
| AAGGAGTAAAGCAACAATTT+GGG | - | tig0023381:49064-49083 | Msa1408390:intergenic | 30.0% | |
| AAAGGAGTAAAGCAACAATT+TGG | - | tig0023381:49065-49084 | Msa1408390:intergenic | 30.0% | |
| !! | AATTGTTGCTTTACTCCTTT+AGG | + | tig0023381:49065-49084 | Msa1408390:intron | 30.0% |
| !! | ATTGTTGCTTTACTCCTTTA+GGG | + | tig0023381:49066-49085 | Msa1408390:intron | 30.0% |
| ATAACCGTTATTGAATTTGC+AGG | - | tig0023381:49194-49213 | Msa1408390:intergenic | 30.0% | |
| CTATTTAAGTCCAATTACTC+TGG | - | tig0023381:49349-49368 | Msa1408390:intergenic | 30.0% | |
| TCTTATGAAGAGTAACTTAG+AGG | + | tig0023381:49799-49818 | Msa1408390:CDS | 30.0% | |
| CTAAATTACATTTGGGCTTT+AGG | + | tig0023381:49872-49891 | Msa1408390:CDS | 30.0% | |
| CTGAATAACTTGGAGATTAA+TGG | + | tig0023381:50052-50071 | Msa1408390:CDS | 30.0% | |
| ATGGGTCGTAAAAAGTTTGA+TGG | + | tig0023381:42936-42955 | Msa1408390:CDS | 35.0% | |
| !! | GTAAAAAGTTTGATGGTGCT+TGG | + | tig0023381:42943-42962 | Msa1408390:CDS | 35.0% |
| AACGCAGAAAACAACAGTTA+TGG | - | tig0023381:43093-43112 | Msa1408390:intergenic | 35.0% | |
| !!! | AACTGTTGTTTTCTGCGTTA+TGG | + | tig0023381:43094-43113 | Msa1408390:CDS | 35.0% |
| !!! | ACTGTTGTTTTCTGCGTTAT+GGG | + | tig0023381:43095-43114 | Msa1408390:CDS | 35.0% |
| AATACCAGGTAAACGTTTGA+TGG | - | tig0023381:43159-43178 | Msa1408390:intergenic | 35.0% | |
| TGTCTTGAATGATAAAGCTC+AGG | + | tig0023381:43196-43215 | Msa1408390:CDS | 35.0% | |
| ATACTCACGTTAACAATGGT+GGG | - | tig0023381:43233-43252 | Msa1408390:intergenic | 35.0% | |
| TATACTCACGTTAACAATGG+TGG | - | tig0023381:43234-43253 | Msa1408390:intergenic | 35.0% | |
| ATGTGTCTACTTCTTTCTCT+AGG | + | tig0023381:43368-43387 | Msa1408390:intron | 35.0% | |
| ATTAGTTAAGGAAGCTGAAG+AGG | + | tig0023381:44476-44495 | Msa1408390:intron | 35.0% | |
| ATACTTAAAAAGGGAACGGA+TGG | - | tig0023381:44622-44641 | Msa1408390:intergenic | 35.0% | |
| AAAGCAGAGATAAGTACAAG+AGG | + | tig0023381:45004-45023 | Msa1408390:intron | 35.0% | |
| TTATCATGGGAATGGTTCAT+GGG | - | tig0023381:45142-45161 | Msa1408390:intergenic | 35.0% | |
| AAAGGATCTCAAAGTAGAAG+AGG | - | tig0023381:45184-45203 | Msa1408390:intergenic | 35.0% | |
| GATGTTGTGGCTTATTTGAA+AGG | - | tig0023381:45232-45251 | Msa1408390:intergenic | 35.0% | |
| TCAGACTTCTTCAAGTGTTT+AGG | - | tig0023381:45360-45379 | Msa1408390:intergenic | 35.0% | |
| TTCTCACAAAAAATCGAACC+TGG | + | tig0023381:45390-45409 | Msa1408390:intron | 35.0% | |
| !!! | GATGAATTGTTTTGGAATCC+AGG | - | tig0023381:45411-45430 | Msa1408390:intergenic | 35.0% |
| ACTATCATCTTCCATGGATT+TGG | - | tig0023381:45708-45727 | Msa1408390:intergenic | 35.0% | |
| ATATGTAGAGTACACATAGG+TGG | + | tig0023381:45749-45768 | Msa1408390:CDS | 35.0% | |
| AGTTTCCATTAGTTGAGTGT+AGG | - | tig0023381:45900-45919 | Msa1408390:intergenic | 35.0% | |
| TTTCTATGGTTTCAACACCT+TGG | - | tig0023381:46051-46070 | Msa1408390:intergenic | 35.0% | |
| ATGAGTTCAATGAAGGTTCT+TGG | - | tig0023381:46127-46146 | Msa1408390:intergenic | 35.0% | |
| TCATTGAATCTTCAGGATCA+GGG | + | tig0023381:46143-46162 | Msa1408390:CDS | 35.0% | |
| GCCACAATATTTCCAAATGA+TGG | + | tig0023381:46175-46194 | Msa1408390:CDS | 35.0% | |
| ATATTGGATTGCTCATAAGG+TGG | + | tig0023381:46356-46375 | Msa1408390:CDS | 35.0% | |
| TATTGGATTGCTCATAAGGT+GGG | + | tig0023381:46357-46376 | Msa1408390:CDS | 35.0% | |
| !! | ACCTTTTCGCAAAGCTTTAT+AGG | - | tig0023381:46434-46453 | Msa1408390:intergenic | 35.0% |
| !! | CATGGATTTGTTGATAGCAT+TGG | + | tig0023381:46462-46481 | Msa1408390:CDS | 35.0% |
| !! | TATTTGGAAGTGTTGGCTAA+AGG | + | tig0023381:46610-46629 | Msa1408390:CDS | 35.0% |
| !! | ATTTGGAAGTGTTGGCTAAA+GGG | + | tig0023381:46611-46630 | Msa1408390:CDS | 35.0% |
| ! | GTGAAAGAGAAATTGATAGC+AGG | + | tig0023381:46728-46747 | Msa1408390:CDS | 35.0% |
| !!! | CATCAGATGGTTTTGTTGTT+TGG | + | tig0023381:46800-46819 | Msa1408390:CDS | 35.0% |
| !!! | TCAGATGGTTTTGTTGTTTG+GGG | + | tig0023381:46802-46821 | Msa1408390:CDS | 35.0% |
| ATGAAGGGTGATATAGTGAT+TGG | + | tig0023381:46880-46899 | Msa1408390:CDS | 35.0% | |
| ! | AATCTGTGAAAGTGCAGTTT+CGG | - | tig0023381:46959-46978 | Msa1408390:intergenic | 35.0% |
| AAATCTGGTCAGCATATTTC+TGG | - | tig0023381:47023-47042 | Msa1408390:intergenic | 35.0% | |
| ! | AATTTTGTCTCCTTCGAAAG+AGG | + | tig0023381:47212-47231 | Msa1408390:intron | 35.0% |
| ! | ATATTTGGTTCCTCTTTCGA+AGG | - | tig0023381:47225-47244 | Msa1408390:intergenic | 35.0% |
| ! | ACATGTTTGGACTCATTTTG+AGG | + | tig0023381:47254-47273 | Msa1408390:intron | 35.0% |
| CTCTTTCAACATGGATATCA+TGG | + | tig0023381:47477-47496 | Msa1408390:CDS | 35.0% | |
| TGCATTCATACCCAAAATCA+TGG | + | tig0023381:47516-47535 | Msa1408390:CDS | 35.0% | |
| ! | GAAGATGGTATCCATGATTT+TGG | - | tig0023381:47530-47549 | Msa1408390:intergenic | 35.0% |
| ! | TCAGTTTGGAATTTCAGTCA+TGG | + | tig0023381:47574-47593 | Msa1408390:CDS | 35.0% |
| ! | CAACTTGCCATTTCAACATT+AGG | + | tig0023381:47762-47781 | Msa1408390:intron | 35.0% |
| !! | AGTTTTGTAGTTACAACCAC+TGG | - | tig0023381:47865-47884 | Msa1408390:intergenic | 35.0% |
| AATAAGTGCTCCATAAAGTG+TGG | + | tig0023381:48007-48026 | Msa1408390:intron | 35.0% | |
| ATAAGTGCTCCATAAAGTGT+GGG | + | tig0023381:48008-48027 | Msa1408390:intron | 35.0% | |
| ! | TCAACAATGGACTTTGCTAT+TGG | - | tig0023381:48569-48588 | Msa1408390:intergenic | 35.0% |
| ! | GACACAAATTCTTTTGCTTC+TGG | - | tig0023381:48638-48657 | Msa1408390:intergenic | 35.0% |
| !! | GGAATTTTGGTATCATTGGA+TGG | + | tig0023381:48800-48819 | Msa1408390:CDS | 35.0% |
| ! | ATAAAGAGCATAATGGTGAC+AGG | + | tig0023381:48905-48924 | Msa1408390:CDS | 35.0% |
| TAATGGTGACAGGTGATAAT+TGG | + | tig0023381:48915-48934 | Msa1408390:CDS | 35.0% | |
| AATGGTGACAGGTGATAATT+GGG | + | tig0023381:48916-48935 | Msa1408390:CDS | 35.0% | |
| AATTCTATTGCTAGACAAGC+TGG | + | tig0023381:48947-48966 | Msa1408390:CDS | 35.0% | |
| !! | ACTTTAGTAGCTTTAGTCTC+AGG | - | tig0023381:49001-49020 | Msa1408390:intergenic | 35.0% |
| TGCAGGTACACACATAATTA+TGG | + | tig0023381:49029-49048 | Msa1408390:intron | 35.0% | |
| AAGCAACAATTTGGGAATTG+GGG | - | tig0023381:49056-49075 | Msa1408390:intergenic | 35.0% | |
| GGGATTAAAACCTACACTAA+CGG | - | tig0023381:49144-49163 | Msa1408390:intergenic | 35.0% | |
| CAGTCCTGCAAATTCAATAA+CGG | + | tig0023381:49187-49206 | Msa1408390:intron | 35.0% | |
| ! | CCACGTTACGTGATTTTATT+GGG | + | tig0023381:49241-49260 | Msa1408390:intron | 35.0% |
| ! | AAACTCGAATTCGATTTTGC+TGG | + | tig0023381:49402-49421 | Msa1408390:intron | 35.0% |
| ! | TATATTTGGTGGCAGAATTC+TGG | + | tig0023381:49659-49678 | Msa1408390:intron | 35.0% |
| ! | AGTTTTCTTTGCAAGGTCAA+TGG | - | tig0023381:49837-49856 | Msa1408390:intergenic | 35.0% |
| ! | GTGAGAAAGTTTTCTTTGCA+AGG | - | tig0023381:49844-49863 | Msa1408390:intergenic | 35.0% |
| GGTAACCTAAATCTAGTAGA+AGG | - | tig0023381:49941-49960 | Msa1408390:intergenic | 35.0% | |
| AATCTCCAAGTTATTCAGCT+TGG | - | tig0023381:50050-50069 | Msa1408390:intergenic | 35.0% | |
| CTTGGGAATGCATAAATGGA+GGG | + | tig0023381:42961-42980 | Msa1408390:CDS | 40.0% | |
| TTAGGATATGTCGTCATCGA+CGG | - | tig0023381:43032-43051 | Msa1408390:intergenic | 40.0% | |
| TCGATGACGACATATCCTAA+AGG | + | tig0023381:43032-43051 | Msa1408390:CDS | 40.0% | |
| AAAGCCATCAAACGTTTACC+TGG | + | tig0023381:43152-43171 | Msa1408390:CDS | 40.0% | |
| CACTTGCATCTGATCAGTTA+AGG | + | tig0023381:43645-43664 | Msa1408390:intron | 40.0% | |
| AGTTAAGGAAGCTGAAGAAG+AGG | + | tig0023381:43660-43679 | Msa1408390:intron | 40.0% | |
| GTTAAGGAAGCTGAAGAAGA+GGG | + | tig0023381:43661-43680 | Msa1408390:intron | 40.0% | |
| GTTATCATGGGAATGGTTCA+TGG | - | tig0023381:45143-45162 | Msa1408390:intergenic | 40.0% | |
| ! | TGATTTGGCATACGATGTTG+TGG | - | tig0023381:45245-45264 | Msa1408390:intergenic | 40.0% |
| ! | GGAAAAGGCAATGCTTTAAG+AGG | - | tig0023381:45276-45295 | Msa1408390:intergenic | 40.0% |
| GTGTTTAGGAGTAATTTCGG+TGG | - | tig0023381:45346-45365 | Msa1408390:intergenic | 40.0% | |
| TGAACGCTAGTGCCTATAAT+TGG | + | tig0023381:45559-45578 | Msa1408390:intron | 40.0% | |
| TGCGTTGTTATGGTATGCAA+TGG | - | tig0023381:45626-45645 | Msa1408390:intergenic | 40.0% | |
| CTCAAATCCAGCATCTTCAA+TGG | - | tig0023381:45684-45703 | Msa1408390:intergenic | 40.0% | |
| CATTGAAGATGCTGGATTTG+AGG | + | tig0023381:45682-45701 | Msa1408390:CDS | 40.0% | |
| GTTGGAACTATCATCTTCCA+TGG | - | tig0023381:45714-45733 | Msa1408390:intergenic | 40.0% | |
| TTGAAGAGCTGATTGCACAT+TGG | - | tig0023381:45798-45817 | Msa1408390:intergenic | 40.0% | |
| TTCTGCTTCTTCAGTTGCTA+AGG | - | tig0023381:45852-45871 | Msa1408390:intergenic | 40.0% | |
| GTTCTTGGACCAGTCATATA+AGG | - | tig0023381:46112-46131 | Msa1408390:intergenic | 40.0% | |
| CTCATTGAATCTTCAGGATC+AGG | + | tig0023381:46142-46161 | Msa1408390:CDS | 40.0% | |
| ! | GCTTTTCTTCCACCATCATT+TGG | - | tig0023381:46190-46209 | Msa1408390:intergenic | 40.0% |
| CTTCCTATGACAAACTGTAC+CGG | - | tig0023381:46394-46413 | Msa1408390:intergenic | 40.0% | |
| GCCTATAAAGCTTTGCGAAA+AGG | + | tig0023381:46430-46449 | Msa1408390:CDS | 40.0% | |
| GCGAAAAGGTTATGCAAACA+TGG | + | tig0023381:46444-46463 | Msa1408390:CDS | 40.0% | |
| ! | TGGCAAGTATTTGGAAGTGT+TGG | + | tig0023381:46603-46622 | Msa1408390:CDS | 40.0% |
| GTTAGTAAGGTTGCTGTATC+AGG | - | tig0023381:46676-46695 | Msa1408390:intergenic | 40.0% | |
| TGATGTGATCAAAGTTGTGC+CGG | + | tig0023381:46765-46784 | Msa1408390:CDS | 40.0% | |
| ! | TGAGAGTATGATAACTGGTG+AGG | + | tig0023381:46840-46859 | Msa1408390:CDS | 40.0% |
| AAAGCCTGTTGCTAAGATGA+AGG | + | tig0023381:46864-46883 | Msa1408390:CDS | 40.0% | |
| AAGCCTGTTGCTAAGATGAA+GGG | + | tig0023381:46865-46884 | Msa1408390:CDS | 40.0% | |
| AAGGGTGATATAGTGATTGG+TGG | + | tig0023381:46883-46902 | Msa1408390:CDS | 40.0% | |
| GGTGGTACTGTGAATGAAAA+TGG | + | tig0023381:46901-46920 | Msa1408390:CDS | 40.0% | |
| CATGTTAAGGTAACAAGGGT+TGG | + | tig0023381:46931-46950 | Msa1408390:CDS | 40.0% | |
| TGACAAAATCATGTTGACGC+CGG | - | tig0023381:47346-47365 | Msa1408390:intergenic | 40.0% | |
| !!! | TTACTAGTGCCTGTTTTTGC+AGG | + | tig0023381:47442-47461 | Msa1408390:intron | 40.0% |
| ACACAATCACCTGCAAAAAC+AGG | - | tig0023381:47454-47473 | Msa1408390:intergenic | 40.0% | |
| ! | TGGATATCATGGTTTGTAGC+TGG | + | tig0023381:47488-47507 | Msa1408390:CDS | 40.0% |
| TTTGAGCTTGCACTTCAGTT+TGG | + | tig0023381:47560-47579 | Msa1408390:CDS | 40.0% | |
| ! | ACTCAAGGTGTGTTGATCAA+AGG | + | tig0023381:47668-47687 | Msa1408390:CDS | 40.0% |
| TGTGTGCACTTTCTAATGCT+TGG | - | tig0023381:47697-47716 | Msa1408390:intergenic | 40.0% | |
| ! | AGCATTAGAAAGTGCACACA+AGG | + | tig0023381:47697-47716 | Msa1408390:CDS | 40.0% |
| ACAAGGTGAGTGAGTAACAT+TGG | + | tig0023381:47714-47733 | Msa1408390:intron | 40.0% | |
| ! | ATGGCAAGTTGAGAGAACAA+TGG | - | tig0023381:47753-47772 | Msa1408390:intergenic | 40.0% |
| AAGACAGGAACTCTGACTAT+TGG | + | tig0023381:47835-47854 | Msa1408390:CDS | 40.0% | |
| AGACAGGAACTCTGACTATT+GGG | + | tig0023381:47836-47855 | Msa1408390:CDS | 40.0% | |
| TAAGTGCTCCATAAAGTGTG+GGG | + | tig0023381:48009-48028 | Msa1408390:intron | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+CGG | + | tig0023381:48036-48055 | Msa1408390:intron | 40.0% |
| ! | GTGTCTCTCGTTAGTCTATT+TGG | + | tig0023381:48461-48480 | Msa1408390:intron | 40.0% |
| TTTGTGTCTATTGCAGGACA+TGG | + | tig0023381:48650-48669 | Msa1408390:CDS | 40.0% | |
| GAAGGCAGTTGTTCAAAACA+AGG | + | tig0023381:48676-48695 | Msa1408390:CDS | 40.0% | |
| ACTAGCAGAAGCTGAAAACA+TGG | + | tig0023381:48769-48788 | Msa1408390:CDS | 40.0% | |
| ! | CATGGCTCAAACAGGAATTT+TGG | + | tig0023381:48787-48806 | Msa1408390:CDS | 40.0% |
| TCATTGGATGGGGAAATTGT+TGG | + | tig0023381:48812-48831 | Msa1408390:CDS | 40.0% | |
| ! | TGGGGAAATTGTTGGAGTTT+TGG | + | tig0023381:48820-48839 | Msa1408390:CDS | 40.0% |
| ! | TCTTTTGCATCAGGTTTCAG+TGG | - | tig0023381:48857-48876 | Msa1408390:intergenic | 40.0% |
| ATGGTGACAGGTGATAATTG+GGG | + | tig0023381:48917-48936 | Msa1408390:CDS | 40.0% | |
| ! | AGCTGGTATTGAAACTGTCA+TGG | + | tig0023381:48964-48983 | Msa1408390:CDS | 40.0% |
| TATTGAAACTGTCATGGCTG+AGG | + | tig0023381:48970-48989 | Msa1408390:CDS | 40.0% | |
| ACAATGAGAGGAAACCCTAA+AGG | - | tig0023381:49083-49102 | Msa1408390:intergenic | 40.0% | |
| AAAAGGAGGGAAACAATGAG+AGG | - | tig0023381:49095-49114 | Msa1408390:intergenic | 40.0% | |
| ! | CTCATTGTTTCCCTCCTTTT+TGG | + | tig0023381:49095-49114 | Msa1408390:intron | 40.0% |
| TTAGTAACTGCCGTTAGTGT+AGG | + | tig0023381:49131-49150 | Msa1408390:intron | 40.0% | |
| TAGTCTCTACGTCAGCTTAT+TGG | + | tig0023381:49217-49236 | Msa1408390:intron | 40.0% | |
| AGTCTCTACGTCAGCTTATT+GGG | + | tig0023381:49218-49237 | Msa1408390:intron | 40.0% | |
| ! | GCCACGTTACGTGATTTTAT+TGG | + | tig0023381:49240-49259 | Msa1408390:intron | 40.0% |
| CCCAATAAAATCACGTAACG+TGG | - | tig0023381:49244-49263 | Msa1408390:intergenic | 40.0% | |
| AATAGTCAATAAGCCCCTCT+AGG | + | tig0023381:49364-49383 | Msa1408390:intron | 40.0% | |
| CAGAATTCTGGATACACTGT+AGG | + | tig0023381:49671-49690 | Msa1408390:intron | 40.0% | |
| TTCTGGATACACTGTAGGAA+TGG | + | tig0023381:49676-49695 | Msa1408390:CDS | 40.0% | |
| ! | AAAAGTATGCCAGCAGCAAT+AGG | - | tig0023381:49917-49936 | Msa1408390:intergenic | 40.0% |
| ! | CTAGATTTAGGTTACCACCT+TGG | + | tig0023381:49945-49964 | Msa1408390:CDS | 40.0% |
| ACCAACCAAGCTGAATAACT+TGG | + | tig0023381:50042-50061 | Msa1408390:CDS | 40.0% | |
| TCCAAGTTATTCAGCTTGGT+TGG | - | tig0023381:50046-50065 | Msa1408390:intergenic | 40.0% | |
| GGTGCTTGGGAATGCATAAA+TGG | + | tig0023381:42957-42976 | Msa1408390:CDS | 45.0% | |
| GCTTGGGAATGCATAAATGG+AGG | + | tig0023381:42960-42979 | Msa1408390:CDS | 45.0% | |
| ATCGATGACGACGTTCCTTT+AGG | - | tig0023381:43050-43069 | Msa1408390:intergenic | 45.0% | |
| TAAAGGAACGTCGTCATCGA+TGG | + | tig0023381:43049-43068 | Msa1408390:CDS | 45.0% | |
| TTTCTCAACAGATCCAGCAC+AGG | - | tig0023381:43135-43154 | Msa1408390:intergenic | 45.0% | |
| ACGTTTACCTGGTATTCGAG+AGG | + | tig0023381:43163-43182 | Msa1408390:CDS | 45.0% | |
| AGTTAAGGAAGCTGAAGAGG+AGG | + | tig0023381:44479-44498 | Msa1408390:intron | 45.0% | |
| GTTAAGGAAGCTGAAGAGGA+GGG | + | tig0023381:44480-44499 | Msa1408390:intron | 45.0% | |
| TCTCAAAGTAGAAGAGGTGG+TGG | - | tig0023381:45178-45197 | Msa1408390:intergenic | 45.0% | |
| GGATCTCAAAGTAGAAGAGG+TGG | - | tig0023381:45181-45200 | Msa1408390:intergenic | 45.0% | |
| TCTACATCCTTGGTGGGAAA+AGG | - | tig0023381:45291-45310 | Msa1408390:intergenic | 45.0% | |
| ! | TTTTCCCACCAAGGATGTAG+AGG | + | tig0023381:45290-45309 | Msa1408390:intron | 45.0% |
| AGGAGTAATTTCGGTGGTGT+CGG | - | tig0023381:45340-45359 | Msa1408390:intergenic | 45.0% | |
| ! | TGGATTTGAGGCCAAATCCA+TGG | + | tig0023381:45694-45713 | Msa1408390:CDS | 45.0% |
| AAGAGCTGATTGCACATTGG+AGG | - | tig0023381:45795-45814 | Msa1408390:intergenic | 45.0% | |
| CAATCTCTTAGGACACTCCA+AGG | + | tig0023381:46031-46050 | Msa1408390:CDS | 45.0% | |
| ACACCGGTACAGTTTGTCAT+AGG | + | tig0023381:46388-46407 | Msa1408390:CDS | 45.0% | |
| ACAAGCTATCGCGAAACTCA+TGG | + | tig0023381:46642-46661 | Msa1408390:CDS | 45.0% | |
| GATGTGATCAAAGTTGTGCC+GGG | + | tig0023381:46766-46785 | Msa1408390:CDS | 45.0% | |
| TCACCCTTCATCTTAGCAAC+AGG | - | tig0023381:46871-46890 | Msa1408390:intergenic | 45.0% | |
| ! | ACTTGTTGAGTCTGCTCAGA+TGG | + | tig0023381:46984-47003 | Msa1408390:CDS | 45.0% |
| !! | TGGTCAGCATATTTCTGGAC+AGG | - | tig0023381:47018-47037 | Msa1408390:intergenic | 45.0% |
| GACAAAATCATGTTGACGCC+GGG | - | tig0023381:47345-47364 | Msa1408390:intergenic | 45.0% | |
| ! | ATAGCTTGTCCTTGTGCTCT+AGG | + | tig0023381:47599-47618 | Msa1408390:CDS | 45.0% |
| ! | CAAGGTGTGTTGATCAAAGG+TGG | + | tig0023381:47671-47690 | Msa1408390:CDS | 45.0% |
| ! | GACTAGTTCCCCACACTTTA+TGG | - | tig0023381:48020-48039 | Msa1408390:intergenic | 45.0% |
| ACTTTAGTCCCTGAATCGGA+AGG | + | tig0023381:48040-48059 | Msa1408390:intron | 45.0% | |
| CTTTAGTCCCTGAATCGGAA+GGG | + | tig0023381:48041-48060 | Msa1408390:intron | 45.0% | |
| TATTGCAGGACATGGAGTGA+AGG | + | tig0023381:48658-48677 | Msa1408390:CDS | 45.0% | |
| GCTGAAAACATGGCTCAAAC+AGG | + | tig0023381:48779-48798 | Msa1408390:CDS | 45.0% | |
| GTGGGACTAACCAGAGTAAT+TGG | + | tig0023381:49336-49355 | Msa1408390:intron | 45.0% | |
| CTGAATGATTCGTCCTAGAG+GGG | - | tig0023381:49380-49399 | Msa1408390:intergenic | 45.0% | |
| CCTGAATGATTCGTCCTAGA+GGG | - | tig0023381:49381-49400 | Msa1408390:intergenic | 45.0% | |
| TCCTGAATGATTCGTCCTAG+AGG | - | tig0023381:49382-49401 | Msa1408390:intergenic | 45.0% | |
| GGATACACTGTAGGAATGGT+AGG | + | tig0023381:49680-49699 | Msa1408390:CDS | 45.0% | |
| ACTGTAGGAATGGTAGGAGA+TGG | + | tig0023381:49686-49705 | Msa1408390:CDS | 45.0% | |
| AGTAGCAGCTGATGTTGGAA+TGG | + | tig0023381:49730-49749 | Msa1408390:CDS | 45.0% | |
| GCTGATGTTGGAATGGCAAT+TGG | + | tig0023381:49737-49756 | Msa1408390:CDS | 45.0% | |
| TATGCCAGCAGCAATAGGAA+TGG | - | tig0023381:49912-49931 | Msa1408390:intergenic | 45.0% | |
| !! | ACATTATAATAAAAATATAA+AGG | - | tig0023381:43308-43327 | Msa1408390:intergenic | 5.0% |
| !!! | TAATTTTTAATTTTTTTTTG+AGG | + | tig0023381:43515-43534 | Msa1408390:intron | 5.0% |
| !! | AAACATTATAATAAATATAA+AGG | - | tig0023381:44143-44162 | Msa1408390:intergenic | 5.0% |
| !!! | TTATACATAATTTTAATTTT+TGG | - | tig0023381:44441-44460 | Msa1408390:intergenic | 5.0% |
| !!! | TTAATATAGTTTTTTTTTTT+AGG | - | tig0023381:44741-44760 | Msa1408390:intergenic | 5.0% |
| !!! | TTTTGAAATTTTAATTTATT+CGG | - | tig0023381:48434-48453 | Msa1408390:intergenic | 5.0% |
| !!! | TTAAAAAAATTAAATTTTGT+AGG | + | tig0023381:49575-49594 | Msa1408390:intron | 5.0% |
| !!! | TAAAAAAATTAAATTTTGTA+GGG | + | tig0023381:49576-49595 | Msa1408390:intron | 5.0% |
| GGTTACACTTGCAGTGCTGT+GGG | + | tig0023381:42982-43001 | Msa1408390:CDS | 50.0% | |
| GATAGTGTGACTCAGGTGAC+AGG | - | tig0023381:43010-43029 | Msa1408390:intergenic | 50.0% | |
| ATCGACGGATAGTGTGACTC+AGG | - | tig0023381:43017-43036 | Msa1408390:intergenic | 50.0% | |
| ACGTCGTCATCGATGGAAGA+AGG | + | tig0023381:43056-43075 | Msa1408390:CDS | 50.0% | |
| ACAACAGCCTCTCGAATACC+AGG | - | tig0023381:43173-43192 | Msa1408390:intergenic | 50.0% | |
| ! | AGCATTGCCTTTTCCCACCA+AGG | + | tig0023381:45281-45300 | Msa1408390:intron | 50.0% |
| CTCACCTCTACATCCTTGGT+GGG | - | tig0023381:45297-45316 | Msa1408390:intergenic | 50.0% | |
| ! | AGTAATTTCGGTGGTGTCGG+GGG | - | tig0023381:45337-45356 | Msa1408390:intergenic | 50.0% |
| ! | GAGTAATTTCGGTGGTGTCG+GGG | - | tig0023381:45338-45357 | Msa1408390:intergenic | 50.0% |
| GGAGTAATTTCGGTGGTGTC+GGG | - | tig0023381:45339-45358 | Msa1408390:intergenic | 50.0% | |
| ! | ACAGGAAGAGAGCATACGTG+AGG | + | tig0023381:45658-45677 | Msa1408390:intron | 50.0% |
| TCAGCTCTTCAATCCCTTCG+TGG | + | tig0023381:45806-45825 | Msa1408390:CDS | 50.0% | |
| CAGCTCTTCAATCCCTTCGT+GGG | + | tig0023381:45807-45826 | Msa1408390:CDS | 50.0% | |
| AGCTCTTCAATCCCTTCGTG+GGG | + | tig0023381:45808-45827 | Msa1408390:CDS | 50.0% | |
| ! | TGCTATTTGCACCCCACGAA+GGG | - | tig0023381:45822-45841 | Msa1408390:intergenic | 50.0% |
| TGGGGTGCAAATAGCACAAG+TGG | + | tig0023381:45826-45845 | Msa1408390:CDS | 50.0% | |
| ! | AAGGTGGGAGTTTTCGACAC+CGG | + | tig0023381:46372-46391 | Msa1408390:CDS | 50.0% |
| ! | ACCTTGAGTTGCACCAACTC+CGG | - | tig0023381:47657-47676 | Msa1408390:intergenic | 50.0% |
| TCTGACTATTGGGAAGCCAG+TGG | + | tig0023381:47846-47865 | Msa1408390:CDS | 50.0% | |
| !! | TGAACTTGTTGCTGCAGCAG+AGG | + | tig0023381:47915-47934 | Msa1408390:intron | 50.0% |
| GACGAATCCCTTCCGATTCA+GGG | - | tig0023381:48051-48070 | Msa1408390:intergenic | 50.0% | |
| TGACGAATCCCTTCCGATTC+AGG | - | tig0023381:48052-48071 | Msa1408390:intergenic | 50.0% | |
| GTCCTCGAGTGTGACATGTT+TGG | + | tig0023381:48398-48417 | Msa1408390:intron | 50.0% | |
| GACCAAACATGTCACACTCG+AGG | - | tig0023381:48403-48422 | Msa1408390:intergenic | 50.0% | |
| !! | CCCTCTAGGACGAATCATTC+AGG | + | tig0023381:49378-49397 | Msa1408390:intron | 50.0% |
| ACATCAGCTGCTACTAGTGC+TGG | - | tig0023381:49725-49744 | Msa1408390:intergenic | 50.0% | |
| GCACTAGTAGCAGCTGATGT+TGG | + | tig0023381:49725-49744 | Msa1408390:CDS | 50.0% | |
| GTTGGAATGGCAATTGGTGC+TGG | + | tig0023381:49743-49762 | Msa1408390:CDS | 50.0% | |
| CTAGCCATTCCTATTGCTGC+TGG | + | tig0023381:49905-49924 | Msa1408390:CDS | 50.0% | |
| AGGTTACCACCTTGGATTGC+TGG | + | tig0023381:49953-49972 | Msa1408390:CDS | 50.0% | |
| ATTGCAGCTCCAGCAATCCA+AGG | - | tig0023381:49965-49984 | Msa1408390:intergenic | 50.0% | |
| TTGGATTGCTGGAGCTGCAA+TGG | + | tig0023381:49964-49983 | Msa1408390:CDS | 50.0% | |
| GGGTTACACTTGCAGTGCTG+TGG | + | tig0023381:42981-43000 | Msa1408390:CDS | 55.0% | |
| GATGGAAGAAGGCTCAGAGC+TGG | + | tig0023381:43067-43086 | Msa1408390:CDS | 55.0% | |
| ATGACATGTGCTGCCTGTGC+TGG | + | tig0023381:43119-43138 | Msa1408390:CDS | 55.0% | |
| CCTCACCTCTACATCCTTGG+TGG | - | tig0023381:45298-45317 | Msa1408390:intergenic | 55.0% | |
| CCACCAAGGATGTAGAGGTG+AGG | + | tig0023381:45295-45314 | Msa1408390:intron | 55.0% | |
| GCTCCTCACCTCTACATCCT+TGG | - | tig0023381:45301-45320 | Msa1408390:intergenic | 55.0% | |
| GGATGTAGAGGTGAGGAGCA+AGG | + | tig0023381:45302-45321 | Msa1408390:intron | 55.0% | |
| CGTGAGGCCATTGAAGATGC+TGG | + | tig0023381:45674-45693 | Msa1408390:CDS | 55.0% | |
| !! | GTGCTATTTGCACCCCACGA+AGG | - | tig0023381:45823-45842 | Msa1408390:intergenic | 55.0% |
| !! | TCTGATGCTACTTTCGCGCC+CGG | - | tig0023381:46787-46806 | Msa1408390:intergenic | 55.0% |
| GGCGCGAAAGTAGCATCAGA+TGG | + | tig0023381:46787-46806 | Msa1408390:CDS | 55.0% | |
| AACCATGACCGCTGTAGGAG+TGG | - | tig0023381:47630-47649 | Msa1408390:intergenic | 55.0% | |
| ACTCCTACAGCGGTCATGGT+TGG | + | tig0023381:47629-47648 | Msa1408390:CDS | 55.0% | |
| GTACCAACCATGACCGCTGT+AGG | - | tig0023381:47635-47654 | Msa1408390:intergenic | 55.0% | |
| ! | ACAGCGGTCATGGTTGGTAC+CGG | + | tig0023381:47635-47654 | Msa1408390:CDS | 55.0% |
| ! | GTCATGGTTGGTACCGGAGT+TGG | + | tig0023381:47641-47660 | Msa1408390:CDS | 55.0% |
| !! | ACCGGAGTTGGTGCAACTCA+AGG | + | tig0023381:47653-47672 | Msa1408390:CDS | 55.0% |
| TTGTTGCTGCAGCAGAGGCA+AGG | + | tig0023381:47920-47939 | Msa1408390:intron | 55.0% | |
| GTGGCTAGGCCTAGAGCACA+AGG | - | tig0023381:47611-47630 | Msa1408390:intergenic | 60.0% | |
| AGGCCTAGCCACTCCTACAG+CGG | + | tig0023381:47619-47638 | Msa1408390:CDS | 60.0% | |
| TGACCGCTGTAGGAGTGGCT+AGG | - | tig0023381:47625-47644 | Msa1408390:intergenic | 60.0% | |
| AGCCACTCCTACAGCGGTCA+TGG | + | tig0023381:47625-47644 | Msa1408390:CDS | 60.0% | |
| GCAGCTCCAGCAATCCAAGG+TGG | - | tig0023381:49962-49981 | Msa1408390:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023381 | gene | 42829 | 50137 | 42829 | ID=Msa1408390;Name=Msa1408390 |
| tig0023381 | mRNA | 42829 | 50137 | 42829 | ID=Msa1408390-mRNA-1;Parent=Msa1408390;Name=Msa1408390-mRNA-1;_AED=0.18;_eAED=0.18;_QI=107|0.6|0.33|1|1|1|6|47|973 |
| tig0023381 | exon | 42829 | 43244 | 42829 | ID=Msa1408390-mRNA-1:exon:25573;Parent=Msa1408390-mRNA-1 |
| tig0023381 | exon | 45662 | 47062 | 45662 | ID=Msa1408390-mRNA-1:exon:25574;Parent=Msa1408390-mRNA-1 |
| tig0023381 | exon | 47464 | 47718 | 47464 | ID=Msa1408390-mRNA-1:exon:25575;Parent=Msa1408390-mRNA-1 |
| tig0023381 | exon | 47814 | 47870 | 47814 | ID=Msa1408390-mRNA-1:exon:25576;Parent=Msa1408390-mRNA-1 |
| tig0023381 | exon | 48551 | 49033 | 48551 | ID=Msa1408390-mRNA-1:exon:25577;Parent=Msa1408390-mRNA-1 |
| tig0023381 | exon | 49674 | 50137 | 49674 | ID=Msa1408390-mRNA-1:exon:25578;Parent=Msa1408390-mRNA-1 |
| tig0023381 | five_prime_UTR | 42829 | 42935 | 42829 | ID=Msa1408390-mRNA-1:five_prime_utr;Parent=Msa1408390-mRNA-1 |
| tig0023381 | CDS | 42936 | 43244 | 42936 | ID=Msa1408390-mRNA-1:cds;Parent=Msa1408390-mRNA-1 |
| tig0023381 | CDS | 45662 | 47062 | 45662 | ID=Msa1408390-mRNA-1:cds;Parent=Msa1408390-mRNA-1 |
| tig0023381 | CDS | 47464 | 47718 | 47464 | ID=Msa1408390-mRNA-1:cds;Parent=Msa1408390-mRNA-1 |
| tig0023381 | CDS | 47814 | 47870 | 47814 | ID=Msa1408390-mRNA-1:cds;Parent=Msa1408390-mRNA-1 |
| tig0023381 | CDS | 48551 | 49033 | 48551 | ID=Msa1408390-mRNA-1:cds;Parent=Msa1408390-mRNA-1 |
| tig0023381 | CDS | 49674 | 50090 | 49674 | ID=Msa1408390-mRNA-1:cds;Parent=Msa1408390-mRNA-1 |
| tig0023381 | three_prime_UTR | 50091 | 50137 | 50091 | ID=Msa1408390-mRNA-1:three_prime_utr;Parent=Msa1408390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
