Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420610 | XP_013461156.1 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420610 | A0A072VAG8 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0420610 | -0.816890 | 4.379163e-52 | -8.615850e-47 |
| Msa0007370 | Msa0420610 | 0.806210 | 9.190165e-50 | -8.615850e-47 |
| Msa0017300 | Msa0420610 | -0.813215 | 2.865210e-51 | -8.615850e-47 |
| Msa0030700 | Msa0420610 | 0.838196 | 3.319237e-57 | -8.615850e-47 |
| Msa0055830 | Msa0420610 | 0.815742 | 7.911080e-52 | -8.615850e-47 |
| Msa0055940 | Msa0420610 | 0.811842 | 5.719625e-51 | -8.615850e-47 |
| Msa0060670 | Msa0420610 | 0.802228 | 6.197066e-49 | -8.615850e-47 |
| Msa0065670 | Msa0420610 | -0.810496 | 1.119992e-50 | -8.615850e-47 |
| Msa0078120 | Msa0420610 | 0.829730 | 4.370559e-55 | -8.615850e-47 |
| Msa0095810 | Msa0420610 | -0.804316 | 2.290756e-49 | -8.615850e-47 |
| Msa0111110 | Msa0420610 | -0.817739 | 2.820689e-52 | -8.615850e-47 |
| Msa0123800 | Msa0420610 | 0.804245 | 2.369554e-49 | -8.615850e-47 |
| Msa0170630 | Msa0420610 | 0.808743 | 2.666201e-50 | -8.615850e-47 |
| Msa0198990 | Msa0420610 | 0.819019 | 1.447040e-52 | -8.615850e-47 |
| Msa0220400 | Msa0420610 | -0.804653 | 1.948069e-49 | -8.615850e-47 |
| Msa0235290 | Msa0420610 | 0.825784 | 3.879976e-54 | -8.615850e-47 |
| Msa0365210 | Msa0420610 | 0.802073 | 6.670917e-49 | -8.615850e-47 |
| Msa0372300 | Msa0420610 | 0.922222 | 1.301696e-88 | -8.615850e-47 |
| Msa0375330 | Msa0420610 | -0.813021 | 3.160149e-51 | -8.615850e-47 |
| Msa0405460 | Msa0420610 | -0.811022 | 8.616611e-51 | -8.615850e-47 |
| Msa0405470 | Msa0420610 | -0.822983 | 1.768574e-53 | -8.615850e-47 |
| Msa0405550 | Msa0420610 | -0.826561 | 2.535052e-54 | -8.615850e-47 |
| Msa0412790 | Msa0420610 | 0.800113 | 1.678441e-48 | -8.615850e-47 |
| Msa0420610 | Msa0457560 | 0.813991 | 1.933328e-51 | -8.615850e-47 |
| Msa0420610 | Msa0465820 | 0.807016 | 6.210474e-50 | -8.615850e-47 |
| Msa0420610 | Msa0476170 | -0.805079 | 1.587275e-49 | -8.615850e-47 |
| Msa0420610 | Msa0483970 | -0.822390 | 2.430243e-53 | -8.615850e-47 |
| Msa0420610 | Msa0512630 | 0.959462 | 1.812076e-117 | -8.615850e-47 |
| Msa0420610 | Msa0592330 | 0.815244 | 1.021014e-51 | -8.615850e-47 |
| Msa0420610 | Msa0596840 | 0.801575 | 8.441269e-49 | -8.615850e-47 |
| Msa0420610 | Msa0599420 | 0.800303 | 1.535709e-48 | -8.615850e-47 |
| Msa0420610 | Msa0657710 | 0.808048 | 3.750119e-50 | -8.615850e-47 |
| Msa0420610 | Msa0657720 | 0.806310 | 8.752038e-50 | -8.615850e-47 |
| Msa0420610 | Msa0702790 | 0.806723 | 7.161642e-50 | -8.615850e-47 |
| Msa0420610 | Msa0702800 | 0.807250 | 5.539147e-50 | -8.615850e-47 |
| Msa0420610 | Msa0733010 | 0.802527 | 5.377494e-49 | -8.615850e-47 |
| Msa0420610 | Msa0744640 | 0.802863 | 4.585226e-49 | -8.615850e-47 |
| Msa0420610 | Msa0755880 | 0.801721 | 7.876510e-49 | -8.615850e-47 |
| Msa0420610 | Msa0773990 | 0.803733 | 3.028555e-49 | -8.615850e-47 |
| Msa0420610 | Msa0778570 | 0.801106 | 1.052875e-48 | -8.615850e-47 |
| Msa0420610 | Msa0795750 | 0.807814 | 4.204885e-50 | -8.615850e-47 |
| Msa0420610 | Msa0828950 | 0.804204 | 2.417155e-49 | -8.615850e-47 |
| Msa0420610 | Msa0828960 | 0.806174 | 9.350761e-50 | -8.615850e-47 |
| Msa0420610 | Msa0833950 | -0.813312 | 2.728112e-51 | -8.615850e-47 |
| Msa0420610 | Msa0841730 | 0.803251 | 3.810324e-49 | -8.615850e-47 |
| Msa0420610 | Msa0867660 | -0.825859 | 3.725678e-54 | -8.615850e-47 |
| Msa0420610 | Msa0879930 | 0.834587 | 2.750193e-56 | -8.615850e-47 |
| Msa0420610 | Msa0908260 | -0.820720 | 5.908647e-53 | -8.615850e-47 |
| Msa0420610 | Msa0908470 | -0.817784 | 2.755012e-52 | -8.615850e-47 |
| Msa0420610 | Msa0908510 | -0.818122 | 2.311343e-52 | -8.615850e-47 |
| Msa0420610 | Msa0908630 | -0.819122 | 1.370880e-52 | -8.615850e-47 |
| Msa0420610 | Msa0908690 | -0.815346 | 9.690653e-52 | -8.615850e-47 |
| Msa0420610 | Msa0908700 | -0.822267 | 2.595996e-53 | -8.615850e-47 |
| Msa0420610 | Msa0924900 | -0.823467 | 1.363672e-53 | -8.615850e-47 |
| Msa0420610 | Msa0983600 | -0.820413 | 6.951038e-53 | -8.615850e-47 |
| Msa0420610 | Msa0983610 | -0.819775 | 9.726337e-53 | -8.615850e-47 |
| Msa0420610 | Msa1086490 | -0.817599 | 3.033088e-52 | -8.615850e-47 |
| Msa0420610 | Msa1086670 | -0.807394 | 5.165583e-50 | -8.615850e-47 |
| Msa0420610 | Msa1086760 | -0.824977 | 6.024471e-54 | -8.615850e-47 |
| Msa0420610 | Msa1086770 | -0.813399 | 2.610777e-51 | -8.615850e-47 |
| Msa0420610 | Msa1086940 | -0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0420610 | Msa1087070 | -0.825598 | 4.295830e-54 | -8.615850e-47 |
| Msa0420610 | Msa1087090 | -0.822529 | 2.256630e-53 | -8.615850e-47 |
| Msa0420610 | Msa1092310 | 0.816044 | 6.774465e-52 | -8.615850e-47 |
| Msa0420610 | Msa1150280 | 0.808885 | 2.485766e-50 | -8.615850e-47 |
| Msa0420610 | Msa1202800 | 0.803356 | 3.625019e-49 | -8.615850e-47 |
| Msa0420610 | Msa1207920 | -0.801599 | 8.345099e-49 | -8.615850e-47 |
| Msa0420610 | Msa1238600 | 0.823044 | 1.712096e-53 | -8.615850e-47 |
| Msa0420610 | Msa1238660 | 0.805052 | 1.608330e-49 | -8.615850e-47 |
| Msa0420610 | Msa1255210 | 0.810159 | 1.323689e-50 | -8.615850e-47 |
| Msa0420610 | Msa1295650 | 0.806927 | 6.484058e-50 | -8.615850e-47 |
| Msa0420610 | Msa1319560 | 0.805694 | 1.179347e-49 | -8.615850e-47 |
| Msa0420610 | Msa1348170 | -0.820034 | 8.490033e-53 | -8.615850e-47 |
| Msa0420610 | Msa1354360 | -0.819017 | 1.448039e-52 | -8.615850e-47 |
| Msa0420610 | Msa1354400 | -0.821044 | 4.977608e-53 | -8.615850e-47 |
| Msa0420610 | Msa1354520 | -0.821365 | 4.197436e-53 | -8.615850e-47 |
| Msa0420610 | Msa1354530 | -0.820449 | 6.818209e-53 | -8.615850e-47 |
| Msa0420610 | Msa1354650 | -0.817843 | 2.671537e-52 | -8.615850e-47 |
| Msa0420610 | Msa1354660 | -0.820459 | 6.782010e-53 | -8.615850e-47 |
| Msa0420610 | Msa1354780 | -0.813735 | 2.201894e-51 | -8.615850e-47 |
| Msa0420610 | Msa1354790 | -0.823298 | 1.493314e-53 | -8.615850e-47 |
| Msa0420610 | Msa1354960 | -0.825771 | 3.909574e-54 | -8.615850e-47 |
| Msa0420610 | Msa1365990 | -0.822636 | 2.130922e-53 | -8.615850e-47 |
| Msa0420610 | Msa1366020 | -0.821414 | 4.089289e-53 | -8.615850e-47 |
| Msa0420610 | Msa1366030 | -0.818304 | 2.101545e-52 | -8.615850e-47 |
| Msa0420610 | Msa1366060 | -0.821870 | 3.208166e-53 | -8.615850e-47 |
| Msa0420610 | Msa1368260 | -0.820710 | 5.940236e-53 | -8.615850e-47 |
| Msa0420610 | Msa1385360 | -0.815495 | 8.980325e-52 | -8.615850e-47 |
| Msa0420610 | Msa1385390 | -0.827163 | 1.820296e-54 | -8.615850e-47 |
| Msa0420610 | Msa1388030 | -0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0420610 | Msa1391130 | -0.823357 | 1.446512e-53 | -8.615850e-47 |
| Msa0420610 | Msa1391140 | -0.821733 | 3.451614e-53 | -8.615850e-47 |
| Msa0420610 | Msa1391260 | -0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa0420610 | Msa1439270 | 0.800799 | 1.216539e-48 | -8.615850e-47 |
| Msa0241750 | Msa0420610 | 0.818235 | 2.178970e-52 | -8.615850e-47 |
| Msa0269170 | Msa0420610 | -0.823407 | 1.408779e-53 | -8.615850e-47 |
| Msa0299530 | Msa0420610 | -0.819157 | 1.345779e-52 | -8.615850e-47 |
| Msa0313900 | Msa0420610 | 0.821379 | 4.165868e-53 | -8.615850e-47 |
| Msa0358300 | Msa0420610 | 0.813590 | 2.369832e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420610 | MtrunA17_Chr3g0120281 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Msa0420610 | MtrunA17_Chr4g0029221 | 44.780 | 431 | 198 | 9 | 45 | 454 | 95 | 506 | 2.75e-108 | 330 |
| Msa0420610 | MtrunA17_Chr1g0181371 | 39.277 | 415 | 200 | 12 | 67 | 454 | 97 | 486 | 1.12e-87 | 276 |
| Msa0420610 | MtrunA17_Chr2g0326551 | 40.967 | 393 | 195 | 11 | 71 | 441 | 89 | 466 | 2.47e-82 | 263 |
| Msa0420610 | MtrunA17_Chr2g0286611 | 34.515 | 423 | 212 | 15 | 25 | 424 | 24 | 404 | 1.56e-57 | 195 |
| Msa0420610 | MtrunA17_Chr7g0246251 | 32.883 | 222 | 94 | 5 | 256 | 437 | 1 | 207 | 1.53e-28 | 112 |
| Msa0420610 | MtrunA17_Chr7g0246271 | 37.427 | 171 | 77 | 5 | 238 | 392 | 45 | 201 | 6.08e-27 | 107 |
| Msa0420610 | MtrunA17_Chr7g0240961 | 41.304 | 92 | 41 | 3 | 214 | 294 | 80 | 169 | 2.92e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420610 | AT5G60580.1 | 48.446 | 386 | 159 | 10 | 55 | 422 | 84 | 447 | 6.59e-104 | 318 |
| Msa0420610 | AT5G60580.3 | 48.446 | 386 | 159 | 10 | 55 | 422 | 84 | 447 | 6.59e-104 | 318 |
| Msa0420610 | AT5G60580.4 | 47.583 | 393 | 159 | 11 | 55 | 422 | 84 | 454 | 4.46e-101 | 311 |
| Msa0420610 | AT5G60580.2 | 47.583 | 393 | 159 | 11 | 55 | 422 | 84 | 454 | 4.46e-101 | 311 |
| Msa0420610 | AT3G09760.1 | 40.420 | 381 | 184 | 11 | 76 | 435 | 115 | 473 | 9.33e-82 | 261 |
| Msa0420610 | AT5G03180.1 | 38.083 | 386 | 185 | 14 | 76 | 437 | 97 | 452 | 3.89e-76 | 246 |
| Msa0420610 | AT5G03180.4 | 37.887 | 388 | 187 | 14 | 76 | 437 | 62 | 421 | 8.92e-76 | 244 |
| Msa0420610 | AT5G03180.2 | 37.113 | 388 | 190 | 13 | 76 | 437 | 97 | 456 | 1.74e-75 | 244 |
| Msa0420610 | AT3G06330.1 | 34.889 | 407 | 211 | 10 | 33 | 424 | 48 | 415 | 3.02e-58 | 198 |
| Msa0420610 | AT3G06330.4 | 41.111 | 270 | 132 | 4 | 171 | 426 | 50 | 306 | 3.60e-57 | 192 |
| Msa0420610 | AT3G06330.2 | 44.444 | 225 | 110 | 2 | 216 | 426 | 25 | 248 | 4.76e-56 | 187 |
| Msa0420610 | AT5G03180.5 | 37.231 | 325 | 154 | 12 | 76 | 374 | 97 | 397 | 1.87e-54 | 187 |
| Msa0420610 | AT5G03180.3 | 37.920 | 327 | 153 | 13 | 76 | 374 | 97 | 401 | 5.86e-54 | 186 |
| Msa0420610 | AT5G18760.1 | 33.154 | 371 | 205 | 8 | 65 | 421 | 56 | 397 | 4.56e-44 | 160 |
| Msa0420610 | AT3G06330.3 | 33.430 | 344 | 175 | 10 | 33 | 361 | 48 | 352 | 1.11e-33 | 130 |
| Msa0420610 | AT5G18760.2 | 32.759 | 290 | 162 | 8 | 65 | 350 | 56 | 316 | 6.80e-27 | 111 |
| Msa0420610 | AT2G37950.1 | 46.774 | 62 | 30 | 2 | 234 | 294 | 80 | 139 | 1.99e-12 | 66.6 |
| Msa0420610 | AT5G05830.1 | 35.833 | 120 | 66 | 3 | 240 | 349 | 79 | 197 | 1.62e-11 | 63.9 |
| Msa0420610 | AT5G01070.1 | 30.657 | 137 | 76 | 5 | 234 | 366 | 74 | 195 | 2.56e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCAACATTCACTGGATT+TGG | 0.151106 | 3_2:-69220398 | Msa0420610:CDS |
| CTACAAACTGCTTCTTCTTC+TGG | 0.229948 | 3_2:+69222905 | None:intergenic |
| TAAGACCTGCAACAGATTCT+AGG | 0.241872 | 3_2:-69223440 | Msa0420610:CDS |
| GTGTACCAGGTTTCAGATTT+GGG | 0.251435 | 3_2:-69221301 | Msa0420610:intron |
| AGTGTACCAGGTTTCAGATT+TGG | 0.280953 | 3_2:-69221302 | Msa0420610:intron |
| TACTTTCTGATAGGAGCTTT+AGG | 0.312686 | 3_2:-69223869 | Msa0420610:CDS |
| AGATGAAAGACTAGGCCTTC+TGG | 0.314784 | 3_2:+69224034 | None:intergenic |
| TTTCAACATTCACTGGATTT+GGG | 0.323066 | 3_2:-69220397 | Msa0420610:CDS |
| GTTACTCCAATTGCTAATTC+AGG | 0.332975 | 3_2:-69223684 | Msa0420610:CDS |
| TCACCTGAATCTAACTTTGA+TGG | 0.339013 | 3_2:-69224745 | Msa0420610:exon |
| GCAACAACTTGAAATATAAT+AGG | 0.343424 | 3_2:+69224796 | None:intergenic |
| TTCTTCTCTTCTTCATCATC+AGG | 0.347218 | 3_2:-69224673 | Msa0420610:intron |
| CCCATCTGATATATTCCATT+AGG | 0.353626 | 3_2:+69220351 | None:intergenic |
| GCACTTTCTAGTGTCCTTGT+TGG | 0.354525 | 3_2:+69224002 | None:intergenic |
| CAGCATGAATTCTCTCCTAA+TGG | 0.357709 | 3_2:-69220366 | Msa0420610:CDS |
| TTAGCGGCTTTGACATTAAC+CGG | 0.367120 | 3_2:+69223465 | None:intergenic |
| CAGAAGAAGAAGCAGTTTGT+AGG | 0.369236 | 3_2:-69222904 | Msa0420610:CDS |
| TCTCCATCAAAGTTAGATTC+AGG | 0.384944 | 3_2:+69224742 | None:intergenic |
| ATCATCAGATAATGGTCCTT+TGG | 0.385393 | 3_2:-69223790 | Msa0420610:CDS |
| ATATCAGATGGGAAACAAAT+AGG | 0.392592 | 3_2:-69220340 | Msa0420610:CDS |
| AGAGAGCAGTAACTAATTAC+AGG | 0.396825 | 3_2:-69222655 | Msa0420610:intron |
| GATACTTTATCATCAGATAA+TGG | 0.405699 | 3_2:-69223798 | Msa0420610:CDS |
| TTTGGTGGAGCTTGCGGAAG+GGG | 0.407562 | 3_2:-69222876 | Msa0420610:CDS |
| ACTTGAAATATAATAGGAAA+TGG | 0.409263 | 3_2:+69224802 | None:intergenic |
| CTAGTCCTCCGACTGTTGTT+CGG | 0.409328 | 3_2:-69222700 | Msa0420610:CDS |
| GTTCTTCTTTCAACATTCAC+TGG | 0.409765 | 3_2:-69220404 | Msa0420610:CDS |
| AGAGAAGAATCTGACATCAT+TGG | 0.413265 | 3_2:+69224687 | None:intergenic |
| AGCAGTTTGTAGGATTTGTT+TGG | 0.425476 | 3_2:-69222894 | Msa0420610:CDS |
| CAGTGAGCAGGAGTTACATA+TGG | 0.426184 | 3_2:-69220587 | Msa0420610:CDS |
| ATAATAAGCCTTCAACTTCA+AGG | 0.427266 | 3_2:-69223767 | Msa0420610:CDS |
| ATCTATCATTGCTTCAACCA+TGG | 0.437805 | 3_2:-69221224 | Msa0420610:CDS |
| TCTGCACCTGAATTAGCAAT+TGG | 0.438182 | 3_2:+69223678 | None:intergenic |
| AGACGCCTAGAATCTGTTGC+AGG | 0.448575 | 3_2:+69223435 | None:intergenic |
| ACTTTGGTAGAATGTGGCCT+TGG | 0.449976 | 3_2:+69223912 | None:intergenic |
| TGCAACAGATTCTAGGCGTC+TGG | 0.456493 | 3_2:-69223433 | Msa0420610:CDS |
| AATAGAATATATGCGCAAAC+AGG | 0.461916 | 3_2:+69220532 | None:intergenic |
| GAATGAGACCTTGAAGTTGA+AGG | 0.470115 | 3_2:+69223759 | None:intergenic |
| AGAGTGTTACTGGAAGATTC+CGG | 0.479931 | 3_2:+69222732 | None:intergenic |
| GAATTAGCAATTGGAGTAAC+CGG | 0.483095 | 3_2:+69223687 | None:intergenic |
| TTGGTAGAATGTGGCCTTGG+TGG | 0.484999 | 3_2:+69223915 | None:intergenic |
| ACAGGATGACAAATGCGAAC+TGG | 0.485665 | 3_2:+69220550 | None:intergenic |
| GCAGGAGAAAGGCAATGAAA+TGG | 0.491496 | 3_2:+69221264 | None:intergenic |
| TCTATCATTGCTTCAACCAT+GGG | 0.492217 | 3_2:-69221223 | Msa0420610:intron |
| TTTCATAGAGGACTTGACTT+TGG | 0.494952 | 3_2:+69223896 | None:intergenic |
| TAAAGCGGCGCATTCGTTAC+CGG | 0.496773 | 3_2:-69223706 | Msa0420610:CDS |
| CCTTGGTGGCAGTCCTCTAG+TGG | 0.497730 | 3_2:+69223929 | None:intergenic |
| TGTTTGGTGGAGCTTGCGGA+AGG | 0.499210 | 3_2:-69222878 | Msa0420610:CDS |
| GGCAGTCCTCTAGTGGAACC+TGG | 0.502946 | 3_2:+69223936 | None:intergenic |
| TGTTGCAGGTCTTAAATTAG+CGG | 0.503069 | 3_2:+69223449 | None:intergenic |
| CTCTTGCATTGAATCACTGC+GGG | 0.504151 | 3_2:+69223359 | None:intergenic |
| TTCTTCTTCTGGAATATCCT+CGG | 0.504900 | 3_2:+69222916 | None:intergenic |
| GAAACACCATCAGTAGTTGC+TGG | 0.505889 | 3_2:+69223384 | None:intergenic |
| ACCACTTTACTGCACAGTCT+TGG | 0.510134 | 3_2:+69222801 | None:intergenic |
| TCCTAATGGAATATATCAGA+TGG | 0.511034 | 3_2:-69220352 | Msa0420610:CDS |
| AGTGATTCAATGCAAGAGAT+TGG | 0.513825 | 3_2:-69223354 | Msa0420610:intron |
| GTGGTATCAACTACAGTCAT+TGG | 0.514336 | 3_2:+69220219 | None:intergenic |
| ATGCTAACCAAGACAAGTAC+TGG | 0.518939 | 3_2:+69221533 | None:intergenic |
| AACGTATGCCGAACAACAGT+CGG | 0.522051 | 3_2:+69222692 | None:intergenic |
| ACCAAGACTGTGCAGTAAAG+TGG | 0.528389 | 3_2:-69222802 | Msa0420610:CDS |
| GTAAAGTGGTTTAGTATCAA+AGG | 0.531954 | 3_2:-69222788 | Msa0420610:CDS |
| AGACCTAAAATGCAGGAGAA+AGG | 0.534858 | 3_2:+69221253 | None:intergenic |
| AGTTTGTAGGATTTGTTTGG+TGG | 0.537738 | 3_2:-69222891 | Msa0420610:CDS |
| CCATCAGTAGTTGCTGGCTG+TGG | 0.539566 | 3_2:+69223390 | None:intergenic |
| ATGTCTGCAAGCAGGATGTC+CGG | 0.544697 | 3_2:-69222751 | Msa0420610:CDS |
| TTGGTGGAGCTTGCGGAAGG+GGG | 0.544999 | 3_2:-69222875 | Msa0420610:CDS |
| TGAAAGGAGACCTAAAATGC+AGG | 0.547003 | 3_2:+69221246 | None:intergenic |
| GTTTGGTGGAGCTTGCGGAA+GGG | 0.550368 | 3_2:-69222877 | Msa0420610:CDS |
| GGATGTACCAGTACTTGTCT+TGG | 0.550915 | 3_2:-69221540 | Msa0420610:intron |
| TGCGCCGCTTTACTCGATGA+AGG | 0.559142 | 3_2:+69223717 | None:intergenic |
| AATGAAATGGCGAGAGCACG+TGG | 0.562922 | 3_2:+69221277 | None:intergenic |
| GGTCCTACATTATCAAGTCC+AGG | 0.565636 | 3_2:-69223954 | Msa0420610:CDS |
| TGTTAATTTCACAGTCCAGA+AGG | 0.566940 | 3_2:-69224049 | Msa0420610:intron |
| CTTGTAGCTTAATGTGAGTG+CGG | 0.568172 | 3_2:-69220435 | Msa0420610:intron |
| TGCATCCTTTGCAGTTGATG+TGG | 0.568430 | 3_2:+69220254 | None:intergenic |
| GTTGAAGGCTTATTATCCAA+AGG | 0.569830 | 3_2:+69223774 | None:intergenic |
| GATTTGTTTGGTGGAGCTTG+CGG | 0.571135 | 3_2:-69222882 | Msa0420610:CDS |
| TAATGTAGGACCATCTGTCT+TGG | 0.572242 | 3_2:+69223965 | None:intergenic |
| ATGACTGTAGTTGATACCAC+TGG | 0.573119 | 3_2:-69220216 | Msa0420610:exon |
| TAAATATATCTGAAGAGTGA+AGG | 0.578970 | 3_2:-69220011 | Msa0420610:three_prime_UTR |
| TTGAAGCAATGATAGATGAA+AGG | 0.581811 | 3_2:+69221230 | None:intergenic |
| GAATCTAACTTTGATGGAGA+AGG | 0.587506 | 3_2:-69224739 | Msa0420610:exon |
| AGTGAGCAGGAGTTACATAT+GGG | 0.587689 | 3_2:-69220586 | Msa0420610:CDS |
| CCTAATGGAATATATCAGAT+GGG | 0.587851 | 3_2:-69220351 | Msa0420610:CDS |
| AGGATGGACTGCAGTTGCAA+AGG | 0.592249 | 3_2:-69222842 | Msa0420610:CDS |
| GACTTGACTTTGGTAGAATG+TGG | 0.592551 | 3_2:+69223906 | None:intergenic |
| TCAAGTCCAGGTTCCACTAG+AGG | 0.596293 | 3_2:-69223942 | Msa0420610:CDS |
| GACATGTGATGTCTGCAAGC+AGG | 0.596981 | 3_2:-69222759 | Msa0420610:CDS |
| AGTCATTGAAGATGCTTCCG+AGG | 0.600332 | 3_2:-69222933 | Msa0420610:CDS |
| TCAGGTGCAGAGAATGTACA+TGG | 0.600495 | 3_2:-69223666 | Msa0420610:CDS |
| CCACTAGAGGACTGCCACCA+AGG | 0.602093 | 3_2:-69223929 | Msa0420610:CDS |
| CCACAGCCAGCAACTACTGA+TGG | 0.604437 | 3_2:-69223390 | Msa0420610:CDS |
| TGTACATGGAAGACATGTAG+AGG | 0.604726 | 3_2:-69223652 | Msa0420610:CDS |
| GTTCCCTTCATCGAGTAAAG+CGG | 0.605134 | 3_2:-69223721 | Msa0420610:CDS |
| AGAATGCAGACATATACTCT+AGG | 0.607758 | 3_2:-69220050 | Msa0420610:three_prime_UTR |
| TCATCTTCTACCAAGACAGA+TGG | 0.609887 | 3_2:-69223975 | Msa0420610:CDS |
| TATACTCTACAGGATCTGGC+AGG | 0.611321 | 3_2:-69221561 | Msa0420610:intron |
| GACAACCACATCAACTGCAA+AGG | 0.622140 | 3_2:-69220259 | Msa0420610:CDS |
| GCGCCGCTTTACTCGATGAA+GGG | 0.624936 | 3_2:+69223718 | None:intergenic |
| CTAACTTTGATGGAGAAGGA+AGG | 0.627321 | 3_2:-69224735 | Msa0420610:exon |
| GAACCTGGACTTGATAATGT+AGG | 0.628266 | 3_2:+69223951 | None:intergenic |
| CATCTCTACAAATACCAACA+AGG | 0.638179 | 3_2:-69224016 | Msa0420610:CDS |
| ATTTGTAGAGATGAAAGACT+AGG | 0.650609 | 3_2:+69224026 | None:intergenic |
| GTTTAAAATACTACTGCACA+TGG | 0.670993 | 3_2:+69220076 | None:intergenic |
| CATGGAAGACATGTAGAGGG+TGG | 0.692052 | 3_2:-69223648 | Msa0420610:CDS |
| TAAAATACTACTGCACATGG+TGG | 0.700579 | 3_2:+69220079 | None:intergenic |
| GTACATGGAAGACATGTAGA+GGG | 0.703736 | 3_2:-69223651 | Msa0420610:CDS |
| TCTCTTGCATTGAATCACTG+CGG | 0.705550 | 3_2:+69223358 | None:intergenic |
| GTATGCCGAACAACAGTCGG+AGG | 0.720782 | 3_2:+69222695 | None:intergenic |
| ATGAAATGGCGAGAGCACGT+GGG | 0.733732 | 3_2:+69221278 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATAATTTTTAGCTTT+TGG | - | chr3_2:69220288-69220307 | Msa0420610:CDS | 10.0% |
| !!! | ATTTATAATTTTTAGCTTTT+GGG | - | chr3_2:69220289-69220308 | Msa0420610:CDS | 10.0% |
| !! | TATCTTTATAGATATTAAAT+AGG | - | chr3_2:69221643-69221662 | Msa0420610:intron | 10.0% |
| !!! | ATATTTTTTCATTTTCTTTT+TGG | - | chr3_2:69223661-69223680 | Msa0420610:CDS | 10.0% |
| !!! | TATTTTTTCATTTTCTTTTT+GGG | - | chr3_2:69223662-69223681 | Msa0420610:CDS | 10.0% |
| !!! | TTTTAAATATGTTTTTTTGT+TGG | - | chr3_2:69224193-69224212 | Msa0420610:intron | 10.0% |
| !!! | TAATTTTTCTTTAGATCAAA+TGG | - | chr3_2:69220226-69220245 | Msa0420610:exon | 15.0% |
| !!! | AATTTTTCTTTAGATCAAAT+GGG | - | chr3_2:69220227-69220246 | Msa0420610:exon | 15.0% |
| !! | AATATTGGAGAAAATAAAAA+AGG | + | chr3_2:69220329-69220348 | None:intergenic | 15.0% |
| !!! | TTCTCCAATATTTTTTTTTT+TGG | - | chr3_2:69220337-69220356 | Msa0420610:CDS | 15.0% |
| !! | ACAACCAAAAAAAAAAATAT+TGG | + | chr3_2:69220344-69220363 | None:intergenic | 15.0% |
| !!! | TTTTATCATAAACCATATTT+CGG | - | chr3_2:69222695-69222714 | Msa0420610:CDS | 15.0% |
| !! | TATTTGAACAATATTCATAT+GGG | + | chr3_2:69223711-69223730 | None:intergenic | 15.0% |
| !! | TTATTTGAACAATATTCATA+TGG | + | chr3_2:69223712-69223731 | None:intergenic | 15.0% |
| !! | ACTTGAAATATAATAGGAAA+TGG | + | chr3_2:69220004-69220023 | None:intergenic | 20.0% |
| !! | AATGACACAAAAATATCTAA+TGG | + | chr3_2:69220539-69220558 | None:intergenic | 20.0% |
| !!! | ATTATTTGTTGATTAAGATG+TGG | + | chr3_2:69220564-69220583 | None:intergenic | 20.0% |
| !! | AAAAACTAGATTGCTAAAAA+AGG | + | chr3_2:69220628-69220647 | None:intergenic | 20.0% |
| !! | AGTGACATAAAAATATCTAA+TGG | + | chr3_2:69220656-69220675 | None:intergenic | 20.0% |
| !! | AAATTTGGTACATTAAAATG+TGG | + | chr3_2:69220681-69220700 | None:intergenic | 20.0% |
| !! | AAATACATCAAACTCAAATT+TGG | + | chr3_2:69220696-69220715 | None:intergenic | 20.0% |
| !!! | AGAAAGTAAATTTTTCATAG+AGG | + | chr3_2:69220922-69220941 | None:intergenic | 20.0% |
| !! | TGAAAAATTTACTTTCTGAT+AGG | - | chr3_2:69220925-69220944 | Msa0420610:intron | 20.0% |
| !! | TTATAGTGAAGATTTCAAAA+GGG | + | chr3_2:69221521-69221540 | None:intergenic | 20.0% |
| !! | CTATAAAGATAAAAAGATAG+AGG | + | chr3_2:69221634-69221653 | None:intergenic | 20.0% |
| !! | TCTCTTCATAAATATTCATA+GGG | + | chr3_2:69221677-69221696 | None:intergenic | 20.0% |
| !! | ATCTCTTCATAAATATTCAT+AGG | + | chr3_2:69221678-69221697 | None:intergenic | 20.0% |
| !! | TTCTAGATAATCTTGTAATT+TGG | + | chr3_2:69222294-69222313 | None:intergenic | 20.0% |
| !!! | GCGAAAATAATAAAAAGTAT+TGG | + | chr3_2:69222333-69222352 | None:intergenic | 20.0% |
| !! | TCTATAATTTCATGTTTGTT+AGG | + | chr3_2:69222553-69222572 | None:intergenic | 20.0% |
| !! | ATATTTGGAAATTAATGAGT+TGG | + | chr3_2:69222722-69222741 | None:intergenic | 20.0% |
| !!! | AGAAAGTATTAGGAAATATT+TGG | + | chr3_2:69222737-69222756 | None:intergenic | 20.0% |
| !!! | TTTTACTAGGCAAATATATT+AGG | - | chr3_2:69222891-69222910 | Msa0420610:CDS | 20.0% |
| !! | ATACAAAACAATCTACTATT+TGG | + | chr3_2:69223063-69223082 | None:intergenic | 20.0% |
| !! | GAGTATATTATAATTAGAGA+AGG | + | chr3_2:69223229-69223248 | None:intergenic | 20.0% |
| !! | CTAATTATAATATACTCTAC+AGG | - | chr3_2:69223232-69223251 | Msa0420610:intron | 20.0% |
| !! | TAAAATGATCAAACAAAGAT+CGG | + | chr3_2:69223338-69223357 | None:intergenic | 20.0% |
| !!! | ATTTTTGTATTTGTACAAGA+TGG | - | chr3_2:69223453-69223472 | Msa0420610:CDS | 20.0% |
| !! | ATTTGAACAATATTCATATG+GGG | + | chr3_2:69223710-69223729 | None:intergenic | 20.0% |
| !!! | TTATGATTTTGTTTCAGATT+AGG | + | chr3_2:69223792-69223811 | None:intergenic | 20.0% |
| !! | ATGTTAAAAACAATGAAACA+CGG | + | chr3_2:69224020-69224039 | None:intergenic | 20.0% |
| !!! | ATTTTCTATGATACTAAGAT+TGG | - | chr3_2:69224670-69224689 | Msa0420610:intron | 20.0% |
| ! | GCAACAACTTGAAATATAAT+AGG | + | chr3_2:69220010-69220029 | None:intergenic | 25.0% |
| ! | TTTCAAAGAAAGAAGCAAAA+GGG | + | chr3_2:69220171-69220190 | None:intergenic | 25.0% |
| !! | TTTTCAAAGAAAGAAGCAAA+AGG | + | chr3_2:69220172-69220191 | None:intergenic | 25.0% |
| ! | ATTATGCTACATAAGCAAAA+GGG | + | chr3_2:69220210-69220229 | None:intergenic | 25.0% |
| ! | AATTATGCTACATAAGCAAA+AGG | + | chr3_2:69220211-69220230 | None:intergenic | 25.0% |
| ! | AGAATGGAACAATTATTTGT+CGG | + | chr3_2:69220480-69220499 | None:intergenic | 25.0% |
| ! | GATACTTTATCATCAGATAA+TGG | - | chr3_2:69221005-69221024 | Msa0420610:intron | 25.0% |
| ! | TGGTAAATCTTCATGATATA+TGG | - | chr3_2:69221469-69221488 | Msa0420610:intron | 25.0% |
| ! | GTTATAGTGAAGATTTCAAA+AGG | + | chr3_2:69221522-69221541 | None:intergenic | 25.0% |
| !!! | ATAATAAAAAGTATTGGTCC+TGG | + | chr3_2:69222327-69222346 | None:intergenic | 25.0% |
| ! | AAGGTTAATCTGTATGTAAA+TGG | - | chr3_2:69222516-69222535 | Msa0420610:intron | 25.0% |
| !! | AATTCTGTAATAACCTTTTC+TGG | + | chr3_2:69222608-69222627 | None:intergenic | 25.0% |
| ! | GGTTTATGATAAAAACATCA+TGG | + | chr3_2:69222689-69222708 | None:intergenic | 25.0% |
| !!! | AAACTATCACAGAAAGTATT+AGG | + | chr3_2:69222747-69222766 | None:intergenic | 25.0% |
| ! | TATAAATGTGACAACTTACT+AGG | - | chr3_2:69222844-69222863 | Msa0420610:CDS | 25.0% |
| ! | ATGTAACAAATAACTTGAGA+TGG | + | chr3_2:69222966-69222985 | None:intergenic | 25.0% |
| !! | TTTAGAGCGTTATTTAAGAA+AGG | + | chr3_2:69222990-69223009 | None:intergenic | 25.0% |
| !! | TCTCAGTTTCTTTAGTTTAT+AGG | + | chr3_2:69223032-69223051 | None:intergenic | 25.0% |
| !!! | GATTGTTTTGTATTTCTCTT+CGG | - | chr3_2:69223070-69223089 | Msa0420610:intron | 25.0% |
| ! | TCTCTTTCAATAATAGTTTC+AGG | + | chr3_2:69223113-69223132 | None:intergenic | 25.0% |
| !!! | CATTTTAGTGTTTTCAAAAC+CGG | - | chr3_2:69223351-69223370 | Msa0420610:intron | 25.0% |
| !!! | AGAATTTGCTCTTTGAAATT+TGG | - | chr3_2:69223824-69223843 | Msa0420610:CDS | 25.0% |
| !!! | GAATTTGCTCTTTGAAATTT+GGG | - | chr3_2:69223825-69223844 | Msa0420610:CDS | 25.0% |
| ! | TTTAGCAAGAATTGGAATAA+AGG | - | chr3_2:69223861-69223880 | Msa0420610:CDS | 25.0% |
| ! | TTGAATGTAATCACATTCAT+TGG | + | chr3_2:69223945-69223964 | None:intergenic | 25.0% |
| !!! | TTCATTGTTTTTAACATGAG+TGG | - | chr3_2:69224023-69224042 | Msa0420610:CDS | 25.0% |
| ! | GATTATTGTAACAAGTTACT+AGG | + | chr3_2:69224137-69224156 | None:intergenic | 25.0% |
| ! | GACTTATTCATAAAACATGA+TGG | + | chr3_2:69224322-69224341 | None:intergenic | 25.0% |
| !!! | ACCAGTTTTTCAAAACTATA+AGG | - | chr3_2:69224615-69224634 | Msa0420610:intron | 25.0% |
| !!! | CCAGTTTTTCAAAACTATAA+GGG | - | chr3_2:69224616-69224635 | Msa0420610:intron | 25.0% |
| ! | TAAATATATCTGAAGAGTGA+AGG | - | chr3_2:69224792-69224811 | Msa0420610:five_prime_UTR | 25.0% |
| TTCAAAGAAAGAAGCAAAAG+GGG | + | chr3_2:69220170-69220189 | None:intergenic | 30.0% | |
| TTATATCATCTTCTACCCTA+TGG | + | chr3_2:69220269-69220288 | None:intergenic | 30.0% | |
| !! | TTCCATTCTAAAATCGAACT+CGG | - | chr3_2:69220491-69220510 | Msa0420610:intron | 30.0% |
| ! | TTTTAGACATGTGCTAGAAA+TGG | - | chr3_2:69220714-69220733 | Msa0420610:intron | 30.0% |
| ATTTGTAGAGATGAAAGACT+AGG | + | chr3_2:69220780-69220799 | None:intergenic | 30.0% | |
| ATAATAAGCCTTCAACTTCA+AGG | - | chr3_2:69221036-69221055 | Msa0420610:intron | 30.0% | |
| TTATGCTGTTCTCATAGTAA+TGG | - | chr3_2:69221197-69221216 | Msa0420610:intron | 30.0% | |
| ATCTTCAAATAAGCTTGTCA+TGG | + | chr3_2:69221718-69221737 | None:intergenic | 30.0% | |
| GTAAAGTGGTTTAGTATCAA+AGG | - | chr3_2:69222015-69222034 | Msa0420610:intron | 30.0% | |
| !!! | GAAATTTTCAAGAGTGTTAC+TGG | + | chr3_2:69222084-69222103 | None:intergenic | 30.0% |
| TCTAATATGTAAGTTTGACG+AGG | + | chr3_2:69222224-69222243 | None:intergenic | 30.0% | |
| ! | ATCTAGAACATTTAAGTTCC+AGG | - | chr3_2:69222306-69222325 | Msa0420610:intron | 30.0% |
| TTCGCTTTGCTTTGATTATA+AGG | - | chr3_2:69222348-69222367 | Msa0420610:intron | 30.0% | |
| ! | CTTTCTGTGATAGTTTTTCT+AGG | - | chr3_2:69222751-69222770 | Msa0420610:CDS | 30.0% |
| TATAATTAGAGAAGGCAGTT+GGG | + | chr3_2:69223221-69223240 | None:intergenic | 30.0% | |
| TTATAATTAGAGAAGGCAGT+TGG | + | chr3_2:69223222-69223241 | None:intergenic | 30.0% | |
| ATAATATACTCTACAGGATC+TGG | - | chr3_2:69223238-69223257 | Msa0420610:intron | 30.0% | |
| TTGAAGCAATGATAGATGAA+AGG | + | chr3_2:69223576-69223595 | None:intergenic | 30.0% | |
| TAAGGGAACTAAAGTTACTT+TGG | + | chr3_2:69223638-69223657 | None:intergenic | 30.0% | |
| ! | ACTACCATTCAACGATTTTA+GGG | + | chr3_2:69223762-69223781 | None:intergenic | 30.0% |
| ! | TACTACCATTCAACGATTTT+AGG | + | chr3_2:69223763-69223782 | None:intergenic | 30.0% |
| ! | TGAAATTTGGGATTTACCAA+TGG | - | chr3_2:69223837-69223856 | Msa0420610:CDS | 30.0% |
| CAACGATTGTCAAATTGTAT+CGG | - | chr3_2:69223905-69223924 | Msa0420610:CDS | 30.0% | |
| AATGAACAGGAAAATTCACA+GGG | + | chr3_2:69224071-69224090 | None:intergenic | 30.0% | |
| TAATGAACAGGAAAATTCAC+AGG | + | chr3_2:69224072-69224091 | None:intergenic | 30.0% | |
| AGTAGAAGAGTTTAATGAAC+AGG | + | chr3_2:69224084-69224103 | None:intergenic | 30.0% | |
| CTAGGTAATTATCATGTCTA+TGG | + | chr3_2:69224119-69224138 | None:intergenic | 30.0% | |
| ! | TACAATAATCACTTGTTAGC+TGG | - | chr3_2:69224147-69224166 | Msa0420610:intron | 30.0% |
| AATAGAATATATGCGCAAAC+AGG | + | chr3_2:69224274-69224293 | None:intergenic | 30.0% | |
| AGTGGATAATGATCTTACTA+TGG | + | chr3_2:69224297-69224316 | None:intergenic | 30.0% | |
| ! | TCATAAAACATGATGGAAAG+TGG | + | chr3_2:69224315-69224334 | None:intergenic | 30.0% |
| TTTCAACATTCACTGGATTT+GGG | - | chr3_2:69224406-69224425 | Msa0420610:intron | 30.0% | |
| TCCTAATGGAATATATCAGA+TGG | - | chr3_2:69224451-69224470 | Msa0420610:intron | 30.0% | |
| CCTAATGGAATATATCAGAT+GGG | - | chr3_2:69224452-69224471 | Msa0420610:intron | 30.0% | |
| ATATCAGATGGGAAACAAAT+AGG | - | chr3_2:69224463-69224482 | Msa0420610:intron | 30.0% | |
| !!! | CCCTTATAGTTTTGAAAAAC+TGG | + | chr3_2:69224619-69224638 | None:intergenic | 30.0% |
| !!! | CATGGTGGAATCAAATTTTT+TGG | + | chr3_2:69224712-69224731 | None:intergenic | 30.0% |
| ! | GTTTAAAATACTACTGCACA+TGG | + | chr3_2:69224730-69224749 | None:intergenic | 30.0% |
| TCACCTGAATCTAACTTTGA+TGG | - | chr3_2:69220058-69220077 | Msa0420610:three_prime_UTR | 35.0% | |
| TCTCCATCAAAGTTAGATTC+AGG | + | chr3_2:69220064-69220083 | None:intergenic | 35.0% | |
| GAATCTAACTTTGATGGAGA+AGG | - | chr3_2:69220064-69220083 | Msa0420610:three_prime_UTR | 35.0% | |
| AGAGAAGAATCTGACATCAT+TGG | + | chr3_2:69220119-69220138 | None:intergenic | 35.0% | |
| TTCTTCTCTTCTTCATCATC+AGG | - | chr3_2:69220130-69220149 | Msa0420610:three_prime_UTR | 35.0% | |
| ! | TAGATCAAATGGGTTTCCAT+TGG | - | chr3_2:69220237-69220256 | Msa0420610:CDS | 35.0% |
| !! | TTTCCATTGGTTTGAACCAT+AGG | - | chr3_2:69220250-69220269 | Msa0420610:CDS | 35.0% |
| !! | TTCCATTGGTTTGAACCATA+GGG | - | chr3_2:69220251-69220270 | Msa0420610:CDS | 35.0% |
| TCGTAATCCTAAGTTTGGTT+TGG | - | chr3_2:69220391-69220410 | Msa0420610:CDS | 35.0% | |
| CTTAACTCCAAACCAAACTT+AGG | + | chr3_2:69220401-69220420 | None:intergenic | 35.0% | |
| CTTAACTCATAGCCAAACTT+GGG | + | chr3_2:69220451-69220470 | None:intergenic | 35.0% | |
| ACTTAACTCATAGCCAAACT+TGG | + | chr3_2:69220452-69220471 | None:intergenic | 35.0% | |
| !! | AACCGAGTTCGATTTTAGAA+TGG | + | chr3_2:69220496-69220515 | None:intergenic | 35.0% |
| TGTTAATTTCACAGTCCAGA+AGG | - | chr3_2:69220754-69220773 | Msa0420610:intron | 35.0% | |
| CATCTCTACAAATACCAACA+AGG | - | chr3_2:69220787-69220806 | Msa0420610:intron | 35.0% | |
| TTTCATAGAGGACTTGACTT+TGG | + | chr3_2:69220910-69220929 | None:intergenic | 35.0% | |
| TACTTTCTGATAGGAGCTTT+AGG | - | chr3_2:69220934-69220953 | Msa0420610:intron | 35.0% | |
| ! | ATCATCAGATAATGGTCCTT+TGG | - | chr3_2:69221013-69221032 | Msa0420610:intron | 35.0% |
| GTTGAAGGCTTATTATCCAA+AGG | + | chr3_2:69221032-69221051 | None:intergenic | 35.0% | |
| GAATTAGCAATTGGAGTAAC+CGG | + | chr3_2:69221119-69221138 | None:intergenic | 35.0% | |
| GTTACTCCAATTGCTAATTC+AGG | - | chr3_2:69221119-69221138 | Msa0420610:intron | 35.0% | |
| TGTTGCAGGTCTTAAATTAG+CGG | + | chr3_2:69221357-69221376 | None:intergenic | 35.0% | |
| AGTGATTCAATGCAAGAGAT+TGG | - | chr3_2:69221449-69221468 | Msa0420610:intron | 35.0% | |
| AGTGCAAATGTAATTGCGAT+GGG | + | chr3_2:69221762-69221781 | None:intergenic | 35.0% | |
| AAGTGCAAATGTAATTGCGA+TGG | + | chr3_2:69221763-69221782 | None:intergenic | 35.0% | |
| CTTCAATGACTGAAACCAAA+CGG | + | chr3_2:69221861-69221880 | None:intergenic | 35.0% | |
| !! | TTCTTCTTCTGGAATATCCT+CGG | + | chr3_2:69221890-69221909 | None:intergenic | 35.0% |
| ! | AGCAGTTTGTAGGATTTGTT+TGG | - | chr3_2:69221909-69221928 | Msa0420610:intron | 35.0% |
| ! | AGTTTGTAGGATTTGTTTGG+TGG | - | chr3_2:69221912-69221931 | Msa0420610:intron | 35.0% |
| AGAGAGCAGTAACTAATTAC+AGG | - | chr3_2:69222148-69222167 | Msa0420610:intron | 35.0% | |
| AAGCATGACAAGAACATTGT+AGG | + | chr3_2:69222253-69222272 | None:intergenic | 35.0% | |
| TTCTTGTCATGCTTACTTGT+TGG | - | chr3_2:69222259-69222278 | Msa0420610:intron | 35.0% | |
| ATCTTGTAATTTGGACCACA+AGG | + | chr3_2:69222285-69222304 | None:intergenic | 35.0% | |
| CTTTGCTTTGATTATAAGGC+TGG | - | chr3_2:69222352-69222371 | Msa0420610:intron | 35.0% | |
| TTGAGCGATTTCTCTTCATT+AGG | + | chr3_2:69222456-69222475 | None:intergenic | 35.0% | |
| AGAGAAATCGCTCAAAGATA+TGG | - | chr3_2:69222461-69222480 | Msa0420610:intron | 35.0% | |
| ATTCACTGAACGAGTCAAAA+AGG | - | chr3_2:69222497-69222516 | Msa0420610:intron | 35.0% | |
| ATCTGTATGTAAATGGCTGT+TGG | - | chr3_2:69222523-69222542 | Msa0420610:intron | 35.0% | |
| TCTGTATGTAAATGGCTGTT+GGG | - | chr3_2:69222524-69222543 | Msa0420610:intron | 35.0% | |
| ! | TAATGAGTTGGACCGAAATA+TGG | + | chr3_2:69222710-69222729 | None:intergenic | 35.0% |
| ACATAATTATGCGATGTTGG+AGG | + | chr3_2:69222807-69222826 | None:intergenic | 35.0% | |
| TCCAACATCGCATAATTATG+TGG | - | chr3_2:69222806-69222825 | Msa0420610:CDS | 35.0% | |
| TCCACATAATTATGCGATGT+TGG | + | chr3_2:69222810-69222829 | None:intergenic | 35.0% | |
| !!! | GACTACATTTTTTTCCCACA+TGG | + | chr3_2:69223141-69223160 | None:intergenic | 35.0% |
| ATAATTAGAGAAGGCAGTTG+GGG | + | chr3_2:69223220-69223239 | None:intergenic | 35.0% | |
| TTATACAACTAGTGACCCAT+TGG | + | chr3_2:69223419-69223438 | None:intergenic | 35.0% | |
| !! | TCAAAGATTTCTAGTGTACC+AGG | - | chr3_2:69223489-69223508 | Msa0420610:CDS | 35.0% |
| ATCTATCATTGCTTCAACCA+TGG | - | chr3_2:69223579-69223598 | Msa0420610:intron | 35.0% | |
| TCTATCATTGCTTCAACCAT+GGG | - | chr3_2:69223580-69223599 | Msa0420610:intron | 35.0% | |
| ! | AAGTTACTTTGGCATGCTAA+GGG | + | chr3_2:69223627-69223646 | None:intergenic | 35.0% |
| ! | AAAGTTACTTTGGCATGCTA+AGG | + | chr3_2:69223628-69223647 | None:intergenic | 35.0% |
| !!! | TTTTTGGGCCGATTAGTTTT+TGG | - | chr3_2:69223677-69223696 | Msa0420610:CDS | 35.0% |
| GTTCATGGCCAAAAACTAAT+CGG | + | chr3_2:69223688-69223707 | None:intergenic | 35.0% | |
| CAATATTCATATGGGGTTCA+TGG | + | chr3_2:69223703-69223722 | None:intergenic | 35.0% | |
| ! | CTACCATTCAACGATTTTAG+GGG | + | chr3_2:69223761-69223780 | None:intergenic | 35.0% |
| CCAATTCTTGCTAAATCCAT+TGG | + | chr3_2:69223856-69223875 | None:intergenic | 35.0% | |
| ! | CCAATGGATTTAGCAAGAAT+TGG | - | chr3_2:69223853-69223872 | Msa0420610:CDS | 35.0% |
| ATCGTTGTAAAGTGAAATGC+AGG | + | chr3_2:69223892-69223911 | None:intergenic | 35.0% | |
| GTTCTTCTTTCAACATTCAC+TGG | - | chr3_2:69224399-69224418 | Msa0420610:intron | 35.0% | |
| CTTTCAACATTCACTGGATT+TGG | - | chr3_2:69224405-69224424 | Msa0420610:intron | 35.0% | |
| CCCATCTGATATATTCCATT+AGG | + | chr3_2:69224455-69224474 | None:intergenic | 35.0% | |
| !!! | AAGATTGGCATTTTAGAGTG+TGG | - | chr3_2:69224685-69224704 | Msa0420610:CDS | 35.0% |
| TAAAATACTACTGCACATGG+TGG | + | chr3_2:69224727-69224746 | None:intergenic | 35.0% | |
| AGAATGCAGACATATACTCT+AGG | - | chr3_2:69224753-69224772 | Msa0420610:five_prime_UTR | 35.0% | |
| CTAACTTTGATGGAGAAGGA+AGG | - | chr3_2:69220068-69220087 | Msa0420610:three_prime_UTR | 40.0% | |
| TACCCTATGGTTCAAACCAA+TGG | + | chr3_2:69220256-69220275 | None:intergenic | 40.0% | |
| GTTAATCCTCTCAGAAGAAG+AGG | - | chr3_2:69220364-69220383 | Msa0420610:CDS | 40.0% | |
| GACACTCGTAATCCTAAGTT+TGG | - | chr3_2:69220386-69220405 | Msa0420610:CDS | 40.0% | |
| GGAGTTAAGTAAAGTCTGAC+TGG | - | chr3_2:69220412-69220431 | Msa0420610:CDS | 40.0% | |
| TCATCTTCTACCAAGACAGA+TGG | - | chr3_2:69220828-69220847 | Msa0420610:intron | 40.0% | |
| TAATGTAGGACCATCTGTCT+TGG | + | chr3_2:69220841-69220860 | None:intergenic | 40.0% | |
| !! | GAACCTGGACTTGATAATGT+AGG | + | chr3_2:69220855-69220874 | None:intergenic | 40.0% |
| GACTTGACTTTGGTAGAATG+TGG | + | chr3_2:69220900-69220919 | None:intergenic | 40.0% | |
| GAATGAGACCTTGAAGTTGA+AGG | + | chr3_2:69221047-69221066 | None:intergenic | 40.0% | |
| TCTGCACCTGAATTAGCAAT+TGG | + | chr3_2:69221128-69221147 | None:intergenic | 40.0% | |
| TGTACATGGAAGACATGTAG+AGG | - | chr3_2:69221151-69221170 | Msa0420610:intron | 40.0% | |
| GTACATGGAAGACATGTAGA+GGG | - | chr3_2:69221152-69221171 | Msa0420610:intron | 40.0% | |
| ! | GACTCGATCATTTTCAGTTC+CGG | - | chr3_2:69221319-69221338 | Msa0420610:intron | 40.0% |
| ! | TTAGCGGCTTTGACATTAAC+CGG | + | chr3_2:69221341-69221360 | None:intergenic | 40.0% |
| TAAGACCTGCAACAGATTCT+AGG | - | chr3_2:69221363-69221382 | Msa0420610:intron | 40.0% | |
| TCTCTTGCATTGAATCACTG+CGG | + | chr3_2:69221448-69221467 | None:intergenic | 40.0% | |
| CTACAAACTGCTTCTTCTTC+TGG | + | chr3_2:69221901-69221920 | None:intergenic | 40.0% | |
| CAGAAGAAGAAGCAGTTTGT+AGG | - | chr3_2:69221899-69221918 | Msa0420610:intron | 40.0% | |
| ! | AGAGTGTTACTGGAAGATTC+CGG | + | chr3_2:69222074-69222093 | None:intergenic | 40.0% |
| ! | TATAAGGCTGGTTGTAGTCT+AGG | - | chr3_2:69222364-69222383 | Msa0420610:intron | 40.0% |
| ! | ATAAGGCTGGTTGTAGTCTA+GGG | - | chr3_2:69222365-69222384 | Msa0420610:intron | 40.0% |
| CAAAGATATGGACGAAAACC+TGG | - | chr3_2:69222473-69222492 | Msa0420610:intron | 40.0% | |
| GAAATGTGTGTCTATGCATG+CGG | - | chr3_2:69222580-69222599 | Msa0420610:intron | 40.0% | |
| AAATGTGTGTCTATGCATGC+GGG | - | chr3_2:69222581-69222600 | Msa0420610:intron | 40.0% | |
| ACAACTTACTAGGCAATCAC+TGG | - | chr3_2:69222854-69222873 | Msa0420610:CDS | 40.0% | |
| TTGAAAGAGAACATGCCATG+TGG | - | chr3_2:69223123-69223142 | Msa0420610:intron | 40.0% | |
| TGAAAGAGAACATGCCATGT+GGG | - | chr3_2:69223124-69223143 | Msa0420610:intron | 40.0% | |
| TAATTAGAGAAGGCAGTTGG+GGG | + | chr3_2:69223219-69223238 | None:intergenic | 40.0% | |
| ATGCTAACCAAGACAAGTAC+TGG | + | chr3_2:69223273-69223292 | None:intergenic | 40.0% | |
| ! | GCTTGCATACTTTTGCTTTC+TGG | - | chr3_2:69223293-69223312 | Msa0420610:intron | 40.0% |
| ! | TGCATACTTTTGCTTTCTGG+AGG | - | chr3_2:69223296-69223315 | Msa0420610:intron | 40.0% |
| ! | TAGTGTTTTCAAAACCGGAC+CGG | - | chr3_2:69223356-69223375 | Msa0420610:CDS | 40.0% |
| AGTGACTCAGTACTTTGACT+GGG | + | chr3_2:69223389-69223408 | None:intergenic | 40.0% | |
| AGTGTACCAGGTTTCAGATT+TGG | - | chr3_2:69223501-69223520 | Msa0420610:CDS | 40.0% | |
| GTGTACCAGGTTTCAGATTT+GGG | - | chr3_2:69223502-69223521 | Msa0420610:CDS | 40.0% | |
| ! | TTGCCTTTCTCCTGCATTTT+AGG | - | chr3_2:69223547-69223566 | Msa0420610:intron | 40.0% |
| AGACCTAAAATGCAGGAGAA+AGG | + | chr3_2:69223553-69223572 | None:intergenic | 40.0% | |
| TGAAAGGAGACCTAAAATGC+AGG | + | chr3_2:69223560-69223579 | None:intergenic | 40.0% | |
| !! | CACATTCATTGGTGTCATGT+CGG | + | chr3_2:69223934-69223953 | None:intergenic | 40.0% |
| !!! | TTTTTTTGTTGGCAGTGAGC+AGG | - | chr3_2:69224204-69224223 | Msa0420610:intron | 40.0% |
| AGTGAGCAGGAGTTACATAT+GGG | - | chr3_2:69224217-69224236 | Msa0420610:intron | 40.0% | |
| CTTGTAGCTTAATGTGAGTG+CGG | - | chr3_2:69224368-69224387 | Msa0420610:intron | 40.0% | |
| ! | TAATGTGAGTGCGGTTTTCT+CGG | - | chr3_2:69224377-69224396 | Msa0420610:intron | 40.0% |
| CAGCATGAATTCTCTCCTAA+TGG | - | chr3_2:69224437-69224456 | Msa0420610:intron | 40.0% | |
| GTGGTATCAACTACAGTCAT+TGG | + | chr3_2:69224587-69224606 | None:intergenic | 40.0% | |
| ! | ATGACTGTAGTTGATACCAC+TGG | - | chr3_2:69224587-69224606 | Msa0420610:intron | 40.0% |
| ! | GAAAAACTGGTCTAAACCAG+TGG | + | chr3_2:69224606-69224625 | None:intergenic | 40.0% |
| CACTCTCGTAATCCCAAGTT+TGG | - | chr3_2:69220436-69220455 | Msa0420610:intron | 45.0% | |
| AGATGAAAGACTAGGCCTTC+TGG | + | chr3_2:69220772-69220791 | None:intergenic | 45.0% | |
| ! | GCACTTTCTAGTGTCCTTGT+TGG | + | chr3_2:69220804-69220823 | None:intergenic | 45.0% |
| GGTCCTACATTATCAAGTCC+AGG | - | chr3_2:69220849-69220868 | Msa0420610:intron | 45.0% | |
| ACTTTGGTAGAATGTGGCCT+TGG | + | chr3_2:69220894-69220913 | None:intergenic | 45.0% | |
| GTTCCCTTCATCGAGTAAAG+CGG | - | chr3_2:69221082-69221101 | Msa0420610:intron | 45.0% | |
| TCAGGTGCAGAGAATGTACA+TGG | - | chr3_2:69221137-69221156 | Msa0420610:intron | 45.0% | |
| GAAACACCATCAGTAGTTGC+TGG | + | chr3_2:69221422-69221441 | None:intergenic | 45.0% | |
| CTCTTGCATTGAATCACTGC+GGG | + | chr3_2:69221447-69221466 | None:intergenic | 45.0% | |
| ! | TTGCATTTTGTCACGCCGTT+TGG | - | chr3_2:69221843-69221862 | Msa0420610:intron | 45.0% |
| AGTCATTGAAGATGCTTCCG+AGG | - | chr3_2:69221870-69221889 | Msa0420610:intron | 45.0% | |
| ! | GATTTGTTTGGTGGAGCTTG+CGG | - | chr3_2:69221921-69221940 | Msa0420610:intron | 45.0% |
| ACCAAGACTGTGCAGTAAAG+TGG | - | chr3_2:69222001-69222020 | Msa0420610:intron | 45.0% | |
| ACCACTTTACTGCACAGTCT+TGG | + | chr3_2:69222005-69222024 | None:intergenic | 45.0% | |
| AACGTATGCCGAACAACAGT+CGG | + | chr3_2:69222114-69222133 | None:intergenic | 45.0% | |
| !! | ATGCTTACTTGTTGGCCTTG+TGG | - | chr3_2:69222267-69222286 | Msa0420610:intron | 45.0% |
| ! | GGTTGTAGTCTAGGGTCATT+AGG | - | chr3_2:69222373-69222392 | Msa0420610:intron | 45.0% |
| TGACTCGTTCAGTGAATACC+AGG | + | chr3_2:69222494-69222513 | None:intergenic | 45.0% | |
| AATTAGAGAAGGCAGTTGGG+GGG | + | chr3_2:69223218-69223237 | None:intergenic | 45.0% | |
| TATACTCTACAGGATCTGGC+AGG | - | chr3_2:69223242-69223261 | Msa0420610:intron | 45.0% | |
| GGATGTACCAGTACTTGTCT+TGG | - | chr3_2:69223263-69223282 | Msa0420610:intron | 45.0% | |
| ! | TTGCTTTCTGGAGGAACTAC+TGG | - | chr3_2:69223305-69223324 | Msa0420610:intron | 45.0% |
| CAGTGACTCAGTACTTTGAC+TGG | + | chr3_2:69223390-69223409 | None:intergenic | 45.0% | |
| !! | CAGTCAAAGTACTGAGTCAC+TGG | - | chr3_2:69223388-69223407 | Msa0420610:CDS | 45.0% |
| TGAGTCACTGGTCAAACCAA+TGG | - | chr3_2:69223400-69223419 | Msa0420610:CDS | 45.0% | |
| GAGTCACTGGTCAAACCAAT+GGG | - | chr3_2:69223401-69223420 | Msa0420610:CDS | 45.0% | |
| GCAGGAGAAAGGCAATGAAA+TGG | + | chr3_2:69223542-69223561 | None:intergenic | 45.0% | |
| GAAGAAAGCGAGTTTACCCA+TGG | + | chr3_2:69223599-69223618 | None:intergenic | 45.0% | |
| !! | TCAACGATTTTAGGGGCTCA+AGG | + | chr3_2:69223754-69223773 | None:intergenic | 45.0% |
| GAGCCCCTAAAATCGTTGAA+TGG | - | chr3_2:69223755-69223774 | Msa0420610:CDS | 45.0% | |
| CAGTGAGCAGGAGTTACATA+TGG | - | chr3_2:69224216-69224235 | Msa0420610:intron | 45.0% | |
| ACAGGATGACAAATGCGAAC+TGG | + | chr3_2:69224256-69224275 | None:intergenic | 45.0% | |
| GACAACCACATCAACTGCAA+AGG | - | chr3_2:69224544-69224563 | Msa0420610:intron | 45.0% | |
| ! | TGCATCCTTTGCAGTTGATG+TGG | + | chr3_2:69224552-69224571 | None:intergenic | 45.0% |
| !!! | ATTAATTTTTTATCATAAAA+AGG | + | chr3_2:69221544-69221563 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTACT+AGG | - | chr3_2:69222878-69222897 | Msa0420610:CDS | 5.0% |
| !! | AAATGAAAAAATATAATTAA+GGG | + | chr3_2:69223655-69223674 | None:intergenic | 5.0% |
| !! | AAAATGAAAAAATATAATTA+AGG | + | chr3_2:69223656-69223675 | None:intergenic | 5.0% |
| GAGTGTCCTCTTCTTCTGAG+AGG | + | chr3_2:69220373-69220392 | None:intergenic | 50.0% | |
| TCAAGTCCAGGTTCCACTAG+AGG | - | chr3_2:69220861-69220880 | Msa0420610:intron | 50.0% | |
| ! | TTGGTAGAATGTGGCCTTGG+TGG | + | chr3_2:69220891-69220910 | None:intergenic | 50.0% |
| TAAAGCGGCGCATTCGTTAC+CGG | - | chr3_2:69221097-69221116 | Msa0420610:intron | 50.0% | |
| CATGGAAGACATGTAGAGGG+TGG | - | chr3_2:69221155-69221174 | Msa0420610:intron | 50.0% | |
| AGACGCCTAGAATCTGTTGC+AGG | + | chr3_2:69221371-69221390 | None:intergenic | 50.0% | |
| TGCAACAGATTCTAGGCGTC+TGG | - | chr3_2:69221370-69221389 | Msa0420610:intron | 50.0% | |
| AGGGGGAGATACTCTTAGGA+TGG | - | chr3_2:69221945-69221964 | Msa0420610:intron | 50.0% | |
| !! | AGGATGGACTGCAGTTGCAA+AGG | - | chr3_2:69221961-69221980 | Msa0420610:intron | 50.0% |
| GACATGTGATGTCTGCAAGC+AGG | - | chr3_2:69222044-69222063 | Msa0420610:intron | 50.0% | |
| ATGTCTGCAAGCAGGATGTC+CGG | - | chr3_2:69222052-69222071 | Msa0420610:intron | 50.0% | |
| CTAGTCCTCCGACTGTTGTT+CGG | - | chr3_2:69222103-69222122 | Msa0420610:intron | 50.0% | |
| TATGCATGCGGGACCAGAAA+AGG | - | chr3_2:69222592-69222611 | Msa0420610:intron | 50.0% | |
| ! | CAAGCCTTTTCCCACTGAGT+GGG | - | chr3_2:69222639-69222658 | Msa0420610:intron | 50.0% |
| ! | AAGCCTTTTCCCACTGAGTG+GGG | - | chr3_2:69222640-69222659 | Msa0420610:intron | 50.0% |
| ATTAGAGAAGGCAGTTGGGG+GGG | + | chr3_2:69223217-69223236 | None:intergenic | 50.0% | |
| ACTTTGACTGGGTCGATGAC+CGG | + | chr3_2:69223378-69223397 | None:intergenic | 50.0% | |
| ! | ATGAAATGGCGAGAGCACGT+GGG | + | chr3_2:69223528-69223547 | None:intergenic | 50.0% |
| ! | AATGAAATGGCGAGAGCACG+TGG | + | chr3_2:69223529-69223548 | None:intergenic | 50.0% |
| ! | GCGCCGCTTTACTCGATGAA+GGG | + | chr3_2:69221088-69221107 | None:intergenic | 55.0% |
| ! | TGCGCCGCTTTACTCGATGA+AGG | + | chr3_2:69221089-69221108 | None:intergenic | 55.0% |
| ! | CCATCAGTAGTTGCTGGCTG+TGG | + | chr3_2:69221416-69221435 | None:intergenic | 55.0% |
| CCACAGCCAGCAACTACTGA+TGG | - | chr3_2:69221413-69221432 | Msa0420610:intron | 55.0% | |
| ! | TGTTTGGTGGAGCTTGCGGA+AGG | - | chr3_2:69221925-69221944 | Msa0420610:intron | 55.0% |
| ! | GTTTGGTGGAGCTTGCGGAA+GGG | - | chr3_2:69221926-69221945 | Msa0420610:intron | 55.0% |
| TTTGGTGGAGCTTGCGGAAG+GGG | - | chr3_2:69221927-69221946 | Msa0420610:intron | 55.0% | |
| CGGAAGGGGGAGATACTCTT+AGG | - | chr3_2:69221941-69221960 | Msa0420610:intron | 55.0% | |
| GTATGCCGAACAACAGTCGG+AGG | + | chr3_2:69222111-69222130 | None:intergenic | 55.0% | |
| CCACTCAGTGGGAAAAGGCT+TGG | + | chr3_2:69222641-69222660 | None:intergenic | 55.0% | |
| ! | CCAAGCCTTTTCCCACTGAG+TGG | - | chr3_2:69222638-69222657 | Msa0420610:intron | 55.0% |
| ! | CTTTTCCCACTGAGTGGGGT+CGG | - | chr3_2:69222644-69222663 | Msa0420610:intron | 55.0% |
| TTCCTCTGCCTCTAGTGCTC+TGG | - | chr3_2:69222777-69222796 | Msa0420610:CDS | 55.0% | |
| ! | GAGGATAGCCAGAGCACTAG+AGG | + | chr3_2:69222788-69222807 | None:intergenic | 55.0% |
| TTAGAGAAGGCAGTTGGGGG+GGG | + | chr3_2:69223216-69223235 | None:intergenic | 55.0% | |
| ! | GTGGGCCCAAATCTGAAACC+TGG | + | chr3_2:69223510-69223529 | None:intergenic | 55.0% |
| GGCAGTCCTCTAGTGGAACC+TGG | + | chr3_2:69220870-69220889 | None:intergenic | 60.0% | |
| ! | CCTTGGTGGCAGTCCTCTAG+TGG | + | chr3_2:69220877-69220896 | None:intergenic | 60.0% |
| CCACTAGAGGACTGCCACCA+AGG | - | chr3_2:69220874-69220893 | Msa0420610:intron | 60.0% | |
| TTGGTGGAGCTTGCGGAAGG+GGG | - | chr3_2:69221928-69221947 | Msa0420610:intron | 60.0% | |
| CGACCCCACTCAGTGGGAAA+AGG | + | chr3_2:69222646-69222665 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTCAGT+GGG | + | chr3_2:69222652-69222671 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACTCAG+TGG | + | chr3_2:69222653-69222672 | None:intergenic | 60.0% | |
| ACTGAGTGGGGTCGGCTACA+TGG | - | chr3_2:69222652-69222671 | Msa0420610:intron | 60.0% | |
| ! | AGCCAGAGCACTAGAGGCAG+AGG | + | chr3_2:69222782-69222801 | None:intergenic | 60.0% |
| TAGAGAAGGCAGTTGGGGGG+GGG | + | chr3_2:69223215-69223234 | None:intergenic | 60.0% | |
| AGAGAAGGCAGTTGGGGGGG+GGG | + | chr3_2:69223214-69223233 | None:intergenic | 65.0% | |
| GACTGGGTCGATGACCGGTC+CGG | + | chr3_2:69223373-69223392 | None:intergenic | 65.0% | |
| AGAAGGCAGTTGGGGGGGGG+GGG | + | chr3_2:69223212-69223231 | None:intergenic | 70.0% | |
| GAGAAGGCAGTTGGGGGGGG+GGG | + | chr3_2:69223213-69223232 | None:intergenic | 70.0% | |
| AAGGCAGTTGGGGGGGGGGG+GGG | + | chr3_2:69223210-69223229 | None:intergenic | 75.0% | |
| GAAGGCAGTTGGGGGGGGGG+GGG | + | chr3_2:69223211-69223230 | None:intergenic | 75.0% | |
| ! | AGGCAGTTGGGGGGGGGGGG+GGG | + | chr3_2:69223209-69223228 | None:intergenic | 80.0% |
| ! | AGTTGGGGGGGGGGGGGGGG+GGG | + | chr3_2:69223205-69223224 | None:intergenic | 85.0% |
| ! | CAGTTGGGGGGGGGGGGGGG+GGG | + | chr3_2:69223206-69223225 | None:intergenic | 85.0% |
| ! | GCAGTTGGGGGGGGGGGGGG+GGG | + | chr3_2:69223207-69223226 | None:intergenic | 85.0% |
| ! | GGCAGTTGGGGGGGGGGGGG+GGG | + | chr3_2:69223208-69223227 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 69220000 | 69224825 | 69220000 | ID=Msa0420610;Name=Msa0420610 |
| chr3_2 | mRNA | 69220000 | 69224825 | 69220000 | ID=Msa0420610-mRNA-1;Parent=Msa0420610;Name=Msa0420610-mRNA-1;_AED=0.09;_eAED=0.09;_QI=77|0.85|0.87|1|0.85|0.87|8|235|462 |
| chr3_2 | exon | 69220000 | 69220450 | 69220000 | ID=Msa0420610-mRNA-1:exon:16458;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69220527 | 69220606 | 69220527 | ID=Msa0420610-mRNA-1:exon:16457;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69221224 | 69221314 | 69221224 | ID=Msa0420610-mRNA-1:exon:16456;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69221541 | 69221571 | 69221541 | ID=Msa0420610-mRNA-1:exon:16455;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69222656 | 69222953 | 69222656 | ID=Msa0420610-mRNA-1:exon:16454;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69223355 | 69223529 | 69223355 | ID=Msa0420610-mRNA-1:exon:16453;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69223635 | 69224057 | 69223635 | ID=Msa0420610-mRNA-1:exon:16452;Parent=Msa0420610-mRNA-1 |
| chr3_2 | exon | 69224674 | 69224825 | 69224674 | ID=Msa0420610-mRNA-1:exon:16451;Parent=Msa0420610-mRNA-1 |
| chr3_2 | five_prime_UTR | 69224749 | 69224825 | 69224749 | ID=Msa0420610-mRNA-1:five_prime_utr;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69224674 | 69224748 | 69224674 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69223635 | 69224057 | 69223635 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69223355 | 69223529 | 69223355 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69222656 | 69222953 | 69222656 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69221541 | 69221571 | 69221541 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69221224 | 69221314 | 69221224 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69220527 | 69220606 | 69220527 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | CDS | 69220235 | 69220450 | 69220235 | ID=Msa0420610-mRNA-1:cds;Parent=Msa0420610-mRNA-1 |
| chr3_2 | three_prime_UTR | 69220000 | 69220234 | 69220000 | ID=Msa0420610-mRNA-1:three_prime_utr;Parent=Msa0420610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
