AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1224150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224150 MtrunA17_Chr4g0075251 92.970 569 13 6 2 548 6 569 0.0 1036
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224150 AT4G04350.1 68.421 570 150 5 8 549 6 573 0.0 805

Find 143 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGTAACGATTTGTATT+TGG 0.202196 8_1:+88904555 None:intergenic
CATCCAATTCAGGTAGAATA+AGG 0.220352 8_1:+88904642 None:intergenic
TGAGTCCATTTGTAATATTC+AGG 0.231341 8_1:+88906276 None:intergenic
AAATTCATCAAATACGTTAA+TGG 0.239065 8_1:-88904963 Msa1224150:CDS
AATTCATCAAATACGTTAAT+GGG 0.245132 8_1:-88904962 Msa1224150:CDS
ATGTCGAGAATATAATATTT+AGG 0.252671 8_1:+88907939 None:intergenic
TAAAAGAAATGCAGAGAAAT+TGG 0.266806 8_1:-88905799 Msa1224150:CDS
AAAATTTAATAGTGAGATTT+CGG 0.271547 8_1:+88904446 None:intergenic
AGCGCCATCTTCATTCATTC+AGG 0.285885 8_1:-88908342 Msa1224150:five_prime_UTR
TGCATATGCTGACCGTCTTC+TGG 0.286400 8_1:-88905855 Msa1224150:CDS
AGGCTGAAGTTCCAGTTAAT+TGG 0.288483 8_1:-88906111 Msa1224150:CDS
GCCCCTTATTCTACCTGAAT+TGG 0.289793 8_1:-88904645 Msa1224150:CDS
ACCTATCCCTGTCATCTTCT+TGG 0.296723 8_1:-88904708 Msa1224150:CDS
CTTGGTTTGTGTTAGTTACT+TGG 0.307412 8_1:-88905566 Msa1224150:intron
GCCACTTGGGCTCAATTTCA+TGG 0.308548 8_1:+88908024 None:intergenic
ATGCCAAAGAAATGATAAAA+AGG 0.308947 8_1:+88904491 None:intergenic
GAAAAGACTGGAGTCTTTAC+TGG 0.310007 8_1:-88905333 Msa1224150:CDS
TTAATGGGGCTTGACATTAA+TGG 0.314740 8_1:-88904947 Msa1224150:CDS
ACGGGGAAGCCATTCCGATA+TGG 0.328679 8_1:-88905287 Msa1224150:CDS
GGAATGGCTTCCCCGTTTGC+TGG 0.330812 8_1:+88905294 None:intergenic
ATGGGTGGCAGATTATGTTT+TGG 0.337227 8_1:-88905268 Msa1224150:CDS
TTTGTAATATTCAGGTTCTA+TGG 0.337810 8_1:+88906284 None:intergenic
AAGAGTGTGATGAGAGGAAT+TGG 0.338765 8_1:+88908249 None:intergenic
AAAGAGAGGATTGGCATATC+AGG 0.344164 8_1:-88906232 Msa1224150:intron
TATTAATCGCTTTACTTCTC+AGG 0.344763 8_1:-88907336 Msa1224150:intron
ACTTTGTTATCAAGATATAA+TGG 0.350424 8_1:-88904524 Msa1224150:CDS
TCTTTACAGTTGAAATCATT+AGG 0.364539 8_1:-88906339 Msa1224150:intron
CATTGTTGAGATGAAGCATT+TGG 0.364818 8_1:+88908273 None:intergenic
AGTGCAGGGCACCAATTAAC+TGG 0.365890 8_1:+88906100 None:intergenic
ACCAGGCCTGATACGATCTT+TGG 0.367392 8_1:-88905689 Msa1224150:CDS
GATAAAAGCATCGCTGAGTC+TGG 0.381319 8_1:-88905016 Msa1224150:CDS
TTCAGGTGAACTACAAGTTA+AGG 0.392340 8_1:-88904766 Msa1224150:intron
GTTGCTCCAAAGATCGTATC+AGG 0.398677 8_1:+88905683 None:intergenic
TCTGGCTAAGGCAGTGTCTT+GGG 0.399685 8_1:-88904588 Msa1224150:CDS
AAAGGATAAGCTCTGTTAAC+AGG 0.401797 8_1:+88908047 None:intergenic
TATCAAGATATAATGGCAAT+TGG 0.408920 8_1:-88904517 Msa1224150:CDS
AGGAACAGGGGAGCCTCCTC+TGG 0.409388 8_1:-88904606 Msa1224150:CDS
ATCCAATTCAGGTAGAATAA+GGG 0.409942 8_1:+88904643 None:intergenic
CTCTGGCTAAGGCAGTGTCT+TGG 0.410040 8_1:-88904589 Msa1224150:CDS
ACATAATCTGCCACCCATAT+CGG 0.411350 8_1:+88905273 None:intergenic
GCCAACACCGTGCCAAGTGC+AGG 0.412233 8_1:+88906085 None:intergenic
TGGTCACAGTGGTGAGCTTT+GGG 0.417119 8_1:+88907360 None:intergenic
AGAAGTAAAGCGATTAATAT+TGG 0.417234 8_1:+88907340 None:intergenic
GGCATTGGCACAAATGTTGA+TGG 0.417295 8_1:-88904473 Msa1224150:CDS
CAGCTCTAAAAGTCATTGAT+TGG 0.417592 8_1:-88904907 Msa1224150:CDS
TTGGTCACAGTGGTGAGCTT+TGG 0.422695 8_1:+88907359 None:intergenic
AATATGACATTCCTATTCGC+TGG 0.429756 8_1:-88905054 Msa1224150:CDS
AGGAGGCTCCCCTGTTCCTG+TGG 0.444311 8_1:+88904610 None:intergenic
GCCAATGAGGAGGTTATTGA+TGG 0.454727 8_1:-88906064 Msa1224150:CDS
AATATTACAAATGGACTCAA+TGG 0.456678 8_1:-88906272 Msa1224150:CDS
TACTGTGGCAGTTATGGAAC+AGG 0.457408 8_1:-88905130 Msa1224150:intron
AAATGAAAGAACAGAGAAAG+AGG 0.458163 8_1:+88908312 None:intergenic
CATTAGGATTCTCATATGAC+TGG 0.458393 8_1:-88906323 Msa1224150:CDS
TCAATTGAAAACCTAGGGTA+AGG 0.462945 8_1:+88907912 None:intergenic
GTTAATTGGTGCCCTGCACT+TGG 0.464628 8_1:-88906097 Msa1224150:CDS
CGGGGAAGCCATTCCGATAT+GGG 0.465129 8_1:-88905286 Msa1224150:CDS
TTGTGTTAGTTACTTGGTTG+TGG 0.466487 8_1:-88905560 Msa1224150:intron
GAGGTCAGAAGGGGCTGAGT+TGG 0.470151 8_1:-88905771 Msa1224150:CDS
TCAGGTGAACTACAAGTTAA+GGG 0.473371 8_1:-88904765 Msa1224150:intron
CAGTGGTGAGACTGTCCCTC+TGG 0.476437 8_1:-88904681 Msa1224150:CDS
TAGAACCTGAATATTACAAA+TGG 0.477618 8_1:-88906281 Msa1224150:CDS
GAAGATGTTGTTCTTCTGAA+TGG 0.481534 8_1:+88908164 None:intergenic
GGCATTACAACCCAGCGAAT+AGG 0.482519 8_1:+88905043 None:intergenic
CAGTATACCTTTCTTACTAC+AGG 0.482607 8_1:+88906019 None:intergenic
GATGTATCGATATCATCATC+TGG 0.484767 8_1:+88907966 None:intergenic
GGAAATCAATGATGAGATCA+AGG 0.489856 8_1:+88905525 None:intergenic
TTACACTTTCCGGCCAGTCC+AGG 0.489888 8_1:+88905819 None:intergenic
TTGAGCATCCATTGCCTCAT+CGG 0.496126 8_1:+88905884 None:intergenic
CTTCTGAATGGTGTGGGAAA+AGG 0.496517 8_1:+88908176 None:intergenic
AGCTCTAAAAGTCATTGATT+GGG 0.502134 8_1:-88904906 Msa1224150:CDS
ACCATCAATAACCTCCTCAT+TGG 0.502814 8_1:+88906063 None:intergenic
TCGACATGTTCCCTTACCCT+AGG 0.504663 8_1:-88907923 Msa1224150:intron
AATTGGATAGGGAGGTCAGA+AGG 0.506229 8_1:-88905782 Msa1224150:CDS
TTATGGAACAGGAGCAATCA+TGG 0.512936 8_1:-88905119 Msa1224150:CDS
AGGAGCAATCATGGCTGTGC+CGG 0.516087 8_1:-88905110 Msa1224150:CDS
CTGTCATCCAAGAAGATGAC+AGG 0.517153 8_1:+88904701 None:intergenic
GAAATGCAGAGAAATTGGAT+AGG 0.517702 8_1:-88905794 Msa1224150:CDS
GAGGAGAAGAGTGTGATGAG+AGG 0.524661 8_1:+88908243 None:intergenic
AGGGGAGCCTCCTCTGGCTA+AGG 0.527138 8_1:-88904600 Msa1224150:CDS
TTTAGATGACCTGGACTGGC+CGG 0.529372 8_1:-88905828 Msa1224150:CDS
ATATGACATTCCTATTCGCT+GGG 0.530687 8_1:-88905053 Msa1224150:CDS
TCTGAAGCTCCGTCCTCTCA+AGG 0.531320 8_1:+88905358 None:intergenic
AAGTGGAAATGGAAAGAGAA+AGG 0.532402 8_1:-88904876 Msa1224150:intron
AAATGATAAACTGAACGAAA+CGG 0.534449 8_1:-88908084 Msa1224150:CDS
ATTGGATAGGGAGGTCAGAA+GGG 0.535801 8_1:-88905781 Msa1224150:CDS
TCCAAAGATCGTATCAGGCC+TGG 0.540002 8_1:+88905688 None:intergenic
CCCTGCACTTGGCACGGTGT+TGG 0.541153 8_1:-88906086 Msa1224150:CDS
AAATGCAGAGAAATTGGATA+GGG 0.542886 8_1:-88905793 Msa1224150:CDS
CCAAGCAGCCGATGAGGCAA+TGG 0.543560 8_1:-88905892 Msa1224150:intron
TTGGGCTCAATTTCATGGAA+AGG 0.544166 8_1:+88908029 None:intergenic
CATTCTTGATGGTGATGGAA+AGG 0.547462 8_1:-88905741 Msa1224150:CDS
TGGTCATCCTGTAGTAAGAA+AGG 0.548024 8_1:-88906026 Msa1224150:intron
GGCAATTCAGTCTCATCCAG+AGG 0.550404 8_1:+88904665 None:intergenic
TCCAATTCAGGTAGAATAAG+GGG 0.553936 8_1:+88904644 None:intergenic
GAGCTTCAGAAGGAAAAGAC+TGG 0.554438 8_1:-88905345 Msa1224150:CDS
GGAGGCTCCCCTGTTCCTGT+GGG 0.555278 8_1:+88904611 None:intergenic
TCTGGAGGATTTAGATGACC+TGG 0.557585 8_1:-88905837 Msa1224150:CDS
TTACATGTTGGACATCCACT+TGG 0.560224 8_1:-88907800 Msa1224150:CDS
ACGTCCTGAATGAATGAAGA+TGG 0.562099 8_1:+88908338 None:intergenic
TTTGCAATAATGCCTTCACC+TGG 0.562303 8_1:+88904983 None:intergenic
AAAGAGTGACCTTGAGAGGA+CGG 0.567367 8_1:-88905367 Msa1224150:CDS
TACATGCTTGCTCTGAGCAG+TGG 0.568657 8_1:+88905504 None:intergenic
CTGCGACTGATATTCTAGCT+AGG 0.571493 8_1:-88907772 Msa1224150:CDS
TGCAGAGAAATTGGATAGGG+AGG 0.575908 8_1:-88905790 Msa1224150:CDS
CACGGTGTTGGCCAATGAGG+AGG 0.576162 8_1:-88906074 Msa1224150:CDS
GATGAGATCAAGGAATGCTC+TGG 0.586275 8_1:+88905535 None:intergenic
TACAACTGTGACTGTGACTG+CGG 0.591231 8_1:+88908126 None:intergenic
TCCAAGAAGATGACAGGGAT+AGG 0.591349 8_1:+88904707 None:intergenic
TCCATGAAATTGAGCCCAAG+TGG 0.593347 8_1:-88908025 Msa1224150:CDS
TGAGAGGACGGAGCTTCAGA+AGG 0.595123 8_1:-88905355 Msa1224150:CDS
ATTCATCAAATACGTTAATG+GGG 0.597745 8_1:-88904961 Msa1224150:CDS
GCTAGGTTTAAACGAATGCA+AGG 0.598535 8_1:-88907755 Msa1224150:CDS
CCAACACCGTGCCAAGTGCA+GGG 0.600748 8_1:+88906086 None:intergenic
ATCTGCCACCCATATCGGAA+TGG 0.601307 8_1:+88905278 None:intergenic
AGGATTTAGATGACCTGGAC+TGG 0.601385 8_1:-88905832 Msa1224150:CDS
AAGCATCGCTGAGTCTGGAA+AGG 0.601785 8_1:-88905011 Msa1224150:CDS
CATCTAAATCCTCCAGAAGA+CGG 0.606104 8_1:+88905843 None:intergenic
TTGGTGCCCTGCACTTGGCA+CGG 0.606496 8_1:-88906092 Msa1224150:CDS
TAATCGCGTGAATCATGTGC+CGG 0.609800 8_1:+88905091 None:intergenic
TGAACTACAAGTTAAGGGAC+TGG 0.610831 8_1:-88904760 Msa1224150:CDS
GTTGTTCTTCTGAATGGTGT+GGG 0.617477 8_1:+88908170 None:intergenic
CAGTTGTAGAATCAGAAACT+CGG 0.619031 8_1:-88908111 Msa1224150:CDS
TTTGCTCGGCAGCGTTACTG+GGG 0.620075 8_1:-88904734 Msa1224150:CDS
TGGCACGGTGTTGGCCAATG+AGG 0.621507 8_1:-88906077 Msa1224150:CDS
TTGGATAGGGAGGTCAGAAG+GGG 0.621938 8_1:-88905780 Msa1224150:CDS
ATTAGGATTCTCATATGACT+GGG 0.624736 8_1:-88906322 Msa1224150:CDS
GACACTGCCTTAGCCAGAGG+AGG 0.630133 8_1:+88904593 None:intergenic
CAATTGAAAACCTAGGGTAA+GGG 0.631350 8_1:+88907913 None:intergenic
AGATTACTGTGTATACTACC+AGG 0.631354 8_1:-88905706 Msa1224150:CDS
GTCATCTTCTTGGATGACAG+TGG 0.636933 8_1:-88904698 Msa1224150:CDS
ATATGCTGACCGTCTTCTGG+AGG 0.638569 8_1:-88905852 Msa1224150:CDS
TGTTGTTCTTCTGAATGGTG+TGG 0.639053 8_1:+88908169 None:intergenic
GCAATTCAGTCTCATCCAGA+GGG 0.651734 8_1:+88904666 None:intergenic
CAAGACACTGCCTTAGCCAG+AGG 0.653249 8_1:+88904590 None:intergenic
TTATTGCCAAGCAGCCGATG+AGG 0.661121 8_1:-88905898 Msa1224150:intron
AGTGGAGCTGGGTTACATGT+TGG 0.662831 8_1:-88907812 Msa1224150:CDS
TCAGTCGCAGTGTATCCAAG+TGG 0.670569 8_1:+88907785 None:intergenic
ATTGATGGTGTGAGTGAACG+CGG 0.670993 8_1:-88906049 Msa1224150:CDS
GGAAGCCATTCCGATATGGG+TGG 0.681101 8_1:-88905283 Msa1224150:CDS
GAATGGTGTGGGAAAAGGAA+CGG 0.696441 8_1:+88908181 None:intergenic
TGTCATCCAAGAAGATGACA+GGG 0.699523 8_1:+88904702 None:intergenic
GCGATTAATATTGGTCACAG+TGG 0.700227 8_1:+88907349 None:intergenic
GATGGTGTGAGTGAACGCGG+TGG 0.812165 8_1:-88906046 Msa1224150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATACAATAATTAAATACA+AGG + chr8_1:88905532-88905551 None:intergenic 10.0%
!! TCTAAATAATTATATTGAAA+AGG - chr8_1:88906139-88906158 Msa1224150:intron 10.0%
!! TAGTAATTGAATACTATAAT+CGG + chr8_1:88905251-88905270 None:intergenic 15.0%
!!! ATAATTTCCATCTTTTTTAT+TGG - chr8_1:88905384-88905403 Msa1224150:CDS 15.0%
!!! ATTTTCTATCTAAATATACA+GGG + chr8_1:88905992-88906011 None:intergenic 15.0%
!!! TTTCTTTCAATTTACTTTTT+TGG - chr8_1:88906809-88906828 Msa1224150:intron 15.0%
!!! TTCTTTCAATTTACTTTTTT+GGG - chr8_1:88906810-88906829 Msa1224150:intron 15.0%
!! TAAAATCCTTCTAATAAATT+AGG + chr8_1:88907330-88907349 None:intergenic 15.0%
!!! TTTATTAGAAGGATTTTAAT+CGG - chr8_1:88907332-88907351 Msa1224150:intron 15.0%
!! ATGTCGAGAATATAATATTT+AGG + chr8_1:88904854-88904873 None:intergenic 20.0%
!! CAGCAAATGTTAATAATTAT+AGG + chr8_1:88905570-88905589 None:intergenic 20.0%
!! TGAAAATTTGATAAAGTTGA+AGG + chr8_1:88905910-88905929 None:intergenic 20.0%
!!! TTTTTTTCTTTCTGAACTTT+TGG - chr8_1:88905935-88905954 Msa1224150:intron 20.0%
!!! TTTTCTATCTAAATATACAG+GGG + chr8_1:88905991-88906010 None:intergenic 20.0%
!!! CATTTTCTATCTAAATATAC+AGG + chr8_1:88905993-88906012 None:intergenic 20.0%
!! AAAATGAAAATATGAGTTTC+AGG - chr8_1:88906007-88906026 Msa1224150:intron 20.0%
!! CTTTGAACTATAAAACAATA+AGG - chr8_1:88906234-88906253 Msa1224150:CDS 20.0%
!!! AAAAGAGAAATTCCTTTTAT+GGG - chr8_1:88906413-88906432 Msa1224150:intron 20.0%
!! ACATCATATAAAAAAAACTC+AGG - chr8_1:88906659-88906678 Msa1224150:intron 20.0%
!!! CTTATGGTTTTTTTTTTGAA+TGG - chr8_1:88906843-88906862 Msa1224150:intron 20.0%
!! AAATTCATCAAATACGTTAA+TGG - chr8_1:88907827-88907846 Msa1224150:intron 20.0%
!! AATTCATCAAATACGTTAAT+GGG - chr8_1:88907828-88907847 Msa1224150:intron 20.0%
!!! AATAAGCTTGTTCATTTTAT+TGG - chr8_1:88907954-88907973 Msa1224150:CDS 20.0%
!!! ACTTTGTTATCAAGATATAA+TGG - chr8_1:88908266-88908285 Msa1224150:CDS 20.0%
! AAATGATAAACTGAACGAAA+CGG - chr8_1:88904706-88904725 Msa1224150:CDS 25.0%
! TAACTTCAATTGAAAACCTA+GGG + chr8_1:88904886-88904905 None:intergenic 25.0%
! AGAAGTAAAGCGATTAATAT+TGG + chr8_1:88905453-88905472 None:intergenic 25.0%
! TCTTCAAATGGATCAAAATT+GGG + chr8_1:88905634-88905653 None:intergenic 25.0%
! ATCTTCAAATGGATCAAAAT+TGG + chr8_1:88905635-88905654 None:intergenic 25.0%
! AAAGAGTAAAGATCTTCAAA+TGG + chr8_1:88905646-88905665 None:intergenic 25.0%
! ATTTGAAGATCTTTACTCTT+TGG - chr8_1:88905645-88905664 Msa1224150:intron 25.0%
! GAATAGTTAAGTAGTTAGTT+AGG - chr8_1:88905692-88905711 Msa1224150:CDS 25.0%
! ATCAACTAGTCAATATGATT+TGG - chr8_1:88905730-88905749 Msa1224150:CDS 25.0%
!! TTAGATTGGTGAATTTTAAG+TGG + chr8_1:88905850-88905869 None:intergenic 25.0%
!!! ATCGAAATTTGCTTTTAGAT+TGG + chr8_1:88905864-88905883 None:intergenic 25.0%
!! GCAATTTGATTTCTCTAATT+TGG + chr8_1:88906113-88906132 None:intergenic 25.0%
!! TGTTTTATAGTTCAAAGCAT+AGG + chr8_1:88906231-88906250 None:intergenic 25.0%
! GAATTGTTAATTCAAGTAAC+TGG - chr8_1:88906329-88906348 Msa1224150:CDS 25.0%
!! TAAAAGGAATTTCTCTTTTC+AGG + chr8_1:88906412-88906431 None:intergenic 25.0%
!! GAAAAGAGAAATTCCTTTTA+TGG - chr8_1:88906412-88906431 Msa1224150:intron 25.0%
! TCTTTACAGTTGAAATCATT+AGG - chr8_1:88906451-88906470 Msa1224150:intron 25.0%
!! TTTGTAATATTCAGGTTCTA+TGG + chr8_1:88906509-88906528 None:intergenic 25.0%
! TAGAACCTGAATATTACAAA+TGG - chr8_1:88906509-88906528 Msa1224150:intron 25.0%
!! AATATTACAAATGGACTCAA+TGG - chr8_1:88906518-88906537 Msa1224150:intron 25.0%
!!! TTTCAATTTACTTTTTTGGG+TGG - chr8_1:88906813-88906832 Msa1224150:intron 25.0%
! TAAAAGAAATGCAGAGAAAT+TGG - chr8_1:88906991-88907010 Msa1224150:intron 25.0%
! ATGAAACCAGAATATAATTG+TGG - chr8_1:88907636-88907655 Msa1224150:intron 25.0%
! ATTCATCAAATACGTTAATG+GGG - chr8_1:88907829-88907848 Msa1224150:intron 25.0%
!!! TATTGGAACGTTGTTTTTTA+TGG - chr8_1:88907971-88907990 Msa1224150:CDS 25.0%
! TATCAAGATATAATGGCAAT+TGG - chr8_1:88908273-88908292 Msa1224150:exon 25.0%
!! ATGCCTTTTTATCATTTCTT+TGG - chr8_1:88908296-88908315 Msa1224150:five_prime_UTR 25.0%
! ATGCCAAAGAAATGATAAAA+AGG + chr8_1:88908302-88908321 None:intergenic 25.0%
!! TTTTATCATTTCTTTGGCAT+TGG - chr8_1:88908302-88908321 Msa1224150:five_prime_UTR 25.0%
AAATGAAAGAACAGAGAAAG+AGG + chr8_1:88904481-88904500 None:intergenic 30.0%
GTAACTTCAATTGAAAACCT+AGG + chr8_1:88904887-88904906 None:intergenic 30.0%
!! ATTATCCATTTTTGTTGCAG+TGG - chr8_1:88904960-88904979 Msa1224150:CDS 30.0%
ATATAATGTGTTGCATCCAA+TGG - chr8_1:88905058-88905077 Msa1224150:CDS 30.0%
TATAATGTGTTGCATCCAAT+GGG - chr8_1:88905059-88905078 Msa1224150:CDS 30.0%
CACAAAGCCAATAAAAAAGA+TGG + chr8_1:88905394-88905413 None:intergenic 30.0%
TATTAATCGCTTTACTTCTC+AGG - chr8_1:88905454-88905473 Msa1224150:intron 30.0%
!! CATATTGACTAGTTGATAGA+GGG + chr8_1:88905727-88905746 None:intergenic 30.0%
!! TCATATTGACTAGTTGATAG+AGG + chr8_1:88905728-88905747 None:intergenic 30.0%
AAAACATGAAGGATTGATTG+AGG + chr8_1:88905757-88905776 None:intergenic 30.0%
GAACAAACACAAAAACATGA+AGG + chr8_1:88905768-88905787 None:intergenic 30.0%
! GGATCTAAATAATTGAGTTG+TGG - chr8_1:88906160-88906179 Msa1224150:intron 30.0%
TAAATACATATCAGAGCCAT+GGG + chr8_1:88906389-88906408 None:intergenic 30.0%
ATTAGTAATGCACCCATAAA+AGG + chr8_1:88906428-88906447 None:intergenic 30.0%
ATTAGGATTCTCATATGACT+GGG - chr8_1:88906468-88906487 Msa1224150:intron 30.0%
TGAGTCCATTTGTAATATTC+AGG + chr8_1:88906517-88906536 None:intergenic 30.0%
!! TTTCTACAGCTTTTAAAGAG+AGG - chr8_1:88906544-88906563 Msa1224150:intron 30.0%
CCATAAGAACATCAATACTT+AGG + chr8_1:88906631-88906650 None:intergenic 30.0%
!! CCTAAGTATTGATGTTCTTA+TGG - chr8_1:88906628-88906647 Msa1224150:intron 30.0%
! TGCATTTCTTTTACACTTTC+CGG + chr8_1:88906984-88907003 None:intergenic 30.0%
AAATGCAGAGAAATTGGATA+GGG - chr8_1:88906997-88907016 Msa1224150:intron 30.0%
! TTGGATTTTTGCATTCTTGA+TGG - chr8_1:88907038-88907057 Msa1224150:intron 30.0%
TCATCAATTTCCTATTTGCT+TGG - chr8_1:88907206-88907225 Msa1224150:intron 30.0%
CTGTTGCCTAATTTATTAGA+AGG - chr8_1:88907321-88907340 Msa1224150:intron 30.0%
!! TTCTTAGGGATTTTAATCTC+AGG - chr8_1:88907372-88907391 Msa1224150:CDS 30.0%
TATGCAAAAAATCCAGCAAA+CGG - chr8_1:88907484-88907503 Msa1224150:intron 30.0%
TTGCTAAATATTCCATGACA+TGG - chr8_1:88907593-88907612 Msa1224150:intron 30.0%
CAGTAACCACAATTATATTC+TGG + chr8_1:88907645-88907664 None:intergenic 30.0%
GAATATAATTGTGGTTACTG+TGG - chr8_1:88907645-88907664 Msa1224150:intron 30.0%
!! AGCTCTAAAAGTCATTGATT+GGG - chr8_1:88907884-88907903 Msa1224150:intron 30.0%
AAATACATTGTTCTTCCTTC+AGG - chr8_1:88908007-88908026 Msa1224150:CDS 30.0%
ATCCAATTCAGGTAGAATAA+GGG + chr8_1:88908150-88908169 None:intergenic 30.0%
GCAAAGTAACGATTTGTATT+TGG + chr8_1:88908238-88908257 None:intergenic 30.0%
! CATTGTTGAGATGAAGCATT+TGG + chr8_1:88904520-88904539 None:intergenic 35.0%
GAAGATGTTGTTCTTCTGAA+TGG + chr8_1:88904629-88904648 None:intergenic 35.0%
CAGTTGTAGAATCAGAAACT+CGG - chr8_1:88904679-88904698 Msa1224150:CDS 35.0%
AAAGGATAAGCTCTGTTAAC+AGG + chr8_1:88904746-88904765 None:intergenic 35.0%
! GATGTATCGATATCATCATC+TGG + chr8_1:88904827-88904846 None:intergenic 35.0%
CAATTGAAAACCTAGGGTAA+GGG + chr8_1:88904880-88904899 None:intergenic 35.0%
TCAATTGAAAACCTAGGGTA+AGG + chr8_1:88904881-88904900 None:intergenic 35.0%
TGAATAGCATATTGTTCTGC+AGG + chr8_1:88905104-88905123 None:intergenic 35.0%
TGCAGAACAATATGCTATTC+AGG - chr8_1:88905103-88905122 Msa1224150:CDS 35.0%
! TCAGGTAAACTGGTAATGAA+AGG - chr8_1:88905472-88905491 Msa1224150:intron 35.0%
! ACTAGCTTGAAAAAAGCCAA+GGG - chr8_1:88906069-88906088 Msa1224150:CDS 35.0%
! AAATAATTGAGTTGTGGCGT+TGG - chr8_1:88906166-88906185 Msa1224150:intron 35.0%
GTAAATACATATCAGAGCCA+TGG + chr8_1:88906390-88906409 None:intergenic 35.0%
CATTAGGATTCTCATATGAC+TGG - chr8_1:88906467-88906486 Msa1224150:intron 35.0%
!! ACAGCTTTTAAAGAGAGGAT+TGG - chr8_1:88906549-88906568 Msa1224150:intron 35.0%
CAGTATACCTTTCTTACTAC+AGG + chr8_1:88906774-88906793 None:intergenic 35.0%
! TTTGGGTGGTTTTTCTCTTA+TGG - chr8_1:88906827-88906846 Msa1224150:intron 35.0%
GAAATGCAGAGAAATTGGAT+AGG - chr8_1:88906996-88907015 Msa1224150:intron 35.0%
!!! TTTTGCATTCTTGATGGTGA+TGG - chr8_1:88907044-88907063 Msa1224150:intron 35.0%
AGATTACTGTGTATACTACC+AGG - chr8_1:88907084-88907103 Msa1224150:intron 35.0%
CTAACACAAACCAAGCAAAT+AGG + chr8_1:88907219-88907238 None:intergenic 35.0%
!! CTTGGTTTGTGTTAGTTACT+TGG - chr8_1:88907224-88907243 Msa1224150:intron 35.0%
TTGTGTTAGTTACTTGGTTG+TGG - chr8_1:88907230-88907249 Msa1224150:intron 35.0%
GGAAATCAATGATGAGATCA+AGG + chr8_1:88907268-88907287 None:intergenic 35.0%
!! AAGGATTTTAATCGGAGACA+AGG - chr8_1:88907340-88907359 Msa1224150:CDS 35.0%
ATGCAAAAAATCCAGCAAAC+GGG - chr8_1:88907485-88907504 Msa1224150:intron 35.0%
AATATGACATTCCTATTCGC+TGG - chr8_1:88907736-88907755 Msa1224150:intron 35.0%
ATATGACATTCCTATTCGCT+GGG - chr8_1:88907737-88907756 Msa1224150:intron 35.0%
TTAATGGGGCTTGACATTAA+TGG - chr8_1:88907843-88907862 Msa1224150:intron 35.0%
!! CAGCTCTAAAAGTCATTGAT+TGG - chr8_1:88907883-88907902 Msa1224150:intron 35.0%
ATTGATTGGGCAGAAAAAAG+TGG - chr8_1:88907897-88907916 Msa1224150:intron 35.0%
AAGTGGAAATGGAAAGAGAA+AGG - chr8_1:88907914-88907933 Msa1224150:intron 35.0%
!! TTAACTTGTAGTTCACCTGA+AGG + chr8_1:88908025-88908044 None:intergenic 35.0%
TTCAGGTGAACTACAAGTTA+AGG - chr8_1:88908024-88908043 Msa1224150:CDS 35.0%
TCAGGTGAACTACAAGTTAA+GGG - chr8_1:88908025-88908044 Msa1224150:CDS 35.0%
TCCAATTCAGGTAGAATAAG+GGG + chr8_1:88908149-88908168 None:intergenic 35.0%
CATCCAATTCAGGTAGAATA+AGG + chr8_1:88908151-88908170 None:intergenic 35.0%
GGAGAAAAATCATCCAATTC+AGG + chr8_1:88908161-88908180 None:intergenic 35.0%
ACGTCCTGAATGAATGAAGA+TGG + chr8_1:88904455-88904474 None:intergenic 40.0%
! AAGAGTGTGATGAGAGGAAT+TGG + chr8_1:88904544-88904563 None:intergenic 40.0%
GTTGTTCTTCTGAATGGTGT+GGG + chr8_1:88904623-88904642 None:intergenic 40.0%
TGTTGTTCTTCTGAATGGTG+TGG + chr8_1:88904624-88904643 None:intergenic 40.0%
TTGGGCTCAATTTCATGGAA+AGG + chr8_1:88904764-88904783 None:intergenic 40.0%
! ATTTTTGTTGCAGTGGAGCT+GGG - chr8_1:88904967-88904986 Msa1224150:CDS 40.0%
TTACATGTTGGACATCCACT+TGG - chr8_1:88904990-88905009 Msa1224150:CDS 40.0%
GCTAGGTTTAAACGAATGCA+AGG - chr8_1:88905035-88905054 Msa1224150:CDS 40.0%
CTACATAGCATGTCAGTGAT+AGG + chr8_1:88905146-88905165 None:intergenic 40.0%
ATTGAAGAAGACGTGTACAC+TGG - chr8_1:88905180-88905199 Msa1224150:intron 40.0%
GACACATGTCAGATAGTGTA+TGG - chr8_1:88905202-88905221 Msa1224150:intron 40.0%
!! TATTGGCTTTGTGTTCAGAC+AGG - chr8_1:88905401-88905420 Msa1224150:intron 40.0%
GCGATTAATATTGGTCACAG+TGG + chr8_1:88905444-88905463 None:intergenic 40.0%
GCTTTACTTCTCAGGTAAAC+TGG - chr8_1:88905462-88905481 Msa1224150:intron 40.0%
! ATTTGCTGCCTATATTGTGC+CGG - chr8_1:88905593-88905612 Msa1224150:intron 40.0%
GTTCATTACCGGCACAATAT+AGG + chr8_1:88905604-88905623 None:intergenic 40.0%
! GGTAGAAGAATATTGACTGC+AGG - chr8_1:88906028-88906047 Msa1224150:CDS 40.0%
!!! GGCTTTTTTCAAGCTAGTCA+AGG + chr8_1:88906067-88906086 None:intergenic 40.0%
!! GACTAGCTTGAAAAAAGCCA+AGG - chr8_1:88906068-88906087 Msa1224150:CDS 40.0%
TAAGTGAGATTTCTGTCCCT+TGG + chr8_1:88906088-88906107 None:intergenic 40.0%
! AAAGAGAGGATTGGCATATC+AGG - chr8_1:88906558-88906577 Msa1224150:intron 40.0%
AGGCTGAAGTTCCAGTTAAT+TGG - chr8_1:88906679-88906698 Msa1224150:intron 40.0%
ACCATCAATAACCTCCTCAT+TGG + chr8_1:88906730-88906749 None:intergenic 40.0%
TGGTCATCCTGTAGTAAGAA+AGG - chr8_1:88906764-88906783 Msa1224150:intron 40.0%
CATCTAAATCCTCCAGAAGA+CGG + chr8_1:88906950-88906969 None:intergenic 40.0%
!! CATTCTTGATGGTGATGGAA+AGG - chr8_1:88907049-88907068 Msa1224150:intron 40.0%
TTTAATCGGAGACAAGGAGA+TGG - chr8_1:88907346-88907365 Msa1224150:CDS 40.0%
ACAAGGAGATGGTGATTCTT+AGG - chr8_1:88907357-88907376 Msa1224150:CDS 40.0%
CAAGGAGATGGTGATTCTTA+GGG - chr8_1:88907358-88907377 Msa1224150:CDS 40.0%
!!! CTCAAGGTCACTCTTTTTTG+AGG + chr8_1:88907419-88907438 None:intergenic 40.0%
CAAAAAAGAGTGACCTTGAG+AGG - chr8_1:88907419-88907438 Msa1224150:intron 40.0%
GAAAAGACTGGAGTCTTTAC+TGG - chr8_1:88907457-88907476 Msa1224150:intron 40.0%
TGCAAAAAATCCAGCAAACG+GGG - chr8_1:88907486-88907505 Msa1224150:intron 40.0%
ACATAATCTGCCACCCATAT+CGG + chr8_1:88907520-88907539 None:intergenic 40.0%
! ATGGGTGGCAGATTATGTTT+TGG - chr8_1:88907522-88907541 Msa1224150:intron 40.0%
! TGGGTGGCAGATTATGTTTT+GGG - chr8_1:88907523-88907542 Msa1224150:intron 40.0%
ATTCCATGACATGGTCAATG+TGG - chr8_1:88907602-88907621 Msa1224150:intron 40.0%
TTATGGAACAGGAGCAATCA+TGG - chr8_1:88907671-88907690 Msa1224150:intron 40.0%
! TCAGCGATGCTTTTATCATC+TGG + chr8_1:88907771-88907790 None:intergenic 40.0%
TTTGCAATAATGCCTTCACC+TGG + chr8_1:88907810-88907829 None:intergenic 40.0%
TGGGCAGAAAAAAGTGGAAA+TGG - chr8_1:88907903-88907922 Msa1224150:intron 40.0%
TGAACTACAAGTTAAGGGAC+TGG - chr8_1:88908030-88908049 Msa1224150:CDS 40.0%
TGTCATCCAAGAAGATGACA+GGG + chr8_1:88908091-88908110 None:intergenic 40.0%
! TTGGATGATTTTTCTCCCAC+AGG - chr8_1:88908164-88908183 Msa1224150:CDS 40.0%
! ATTTTTCTCCCACAGGAACA+GGG - chr8_1:88908171-88908190 Msa1224150:CDS 40.0%
!! TGAATTTTGAGGAAGGGAGG+GGG + chr8_1:88904586-88904605 None:intergenic 45.0%
!! CTGAATTTTGAGGAAGGGAG+GGG + chr8_1:88904587-88904606 None:intergenic 45.0%
!! GCTGAATTTTGAGGAAGGGA+GGG + chr8_1:88904588-88904607 None:intergenic 45.0%
!! TGCTGAATTTTGAGGAAGGG+AGG + chr8_1:88904589-88904608 None:intergenic 45.0%
!! CGGTGCTGAATTTTGAGGAA+GGG + chr8_1:88904592-88904611 None:intergenic 45.0%
!! ACGGTGCTGAATTTTGAGGA+AGG + chr8_1:88904593-88904612 None:intergenic 45.0%
!! AGGAACGGTGCTGAATTTTG+AGG + chr8_1:88904597-88904616 None:intergenic 45.0%
GAATGGTGTGGGAAAAGGAA+CGG + chr8_1:88904612-88904631 None:intergenic 45.0%
CTTCTGAATGGTGTGGGAAA+AGG + chr8_1:88904617-88904636 None:intergenic 45.0%
TACAACTGTGACTGTGACTG+CGG + chr8_1:88904667-88904686 None:intergenic 45.0%
TCCATGAAATTGAGCCCAAG+TGG - chr8_1:88904765-88904784 Msa1224150:intron 45.0%
CAGCTCCACTGCAACAAAAA+TGG + chr8_1:88904968-88904987 None:intergenic 45.0%
! CATTTTTGTTGCAGTGGAGC+TGG - chr8_1:88904966-88904985 Msa1224150:CDS 45.0%
! CTGCGACTGATATTCTAGCT+AGG - chr8_1:88905018-88905037 Msa1224150:CDS 45.0%
ATGTGTTGCATCCAATGGGT+TGG - chr8_1:88905063-88905082 Msa1224150:CDS 45.0%
! TGTGTTGCATCCAATGGGTT+GGG - chr8_1:88905064-88905083 Msa1224150:CDS 45.0%
TGGGCGCATAAGTTCATTAC+CGG + chr8_1:88905615-88905634 None:intergenic 45.0%
AAATATACAGGGGTCTGCTC+TGG + chr8_1:88905981-88906000 None:intergenic 45.0%
ATTGACTGCAGGACCAAGTT+TGG - chr8_1:88906039-88906058 Msa1224150:CDS 45.0%
GCTAGTCAAGGAACCAAACT+TGG + chr8_1:88906055-88906074 None:intergenic 45.0%
!! GGCTACTTTGAAGCTTATCC+AGG + chr8_1:88906195-88906214 None:intergenic 45.0%
AGCATAGGCTTACAGCTTAC+TGG + chr8_1:88906216-88906235 None:intergenic 45.0%
ATGGGAAGCAAATCAAGTGG+AGG + chr8_1:88906371-88906390 None:intergenic 45.0%
!! TCCACTTGATTTGCTTCCCA+TGG - chr8_1:88906370-88906389 Msa1224150:intron 45.0%
GCCAATGAGGAGGTTATTGA+TGG - chr8_1:88906726-88906745 Msa1224150:intron 45.0%
!! ATTGATGGTGTGAGTGAACG+CGG - chr8_1:88906741-88906760 Msa1224150:intron 45.0%
TTGAGCATCCATTGCCTCAT+CGG + chr8_1:88906909-88906928 None:intergenic 45.0%
TCTGGAGGATTTAGATGACC+TGG - chr8_1:88906953-88906972 Msa1224150:intron 45.0%
AGGATTTAGATGACCTGGAC+TGG - chr8_1:88906958-88906977 Msa1224150:intron 45.0%
TGCAGAGAAATTGGATAGGG+AGG - chr8_1:88907000-88907019 Msa1224150:intron 45.0%
AATTGGATAGGGAGGTCAGA+AGG - chr8_1:88907008-88907027 Msa1224150:intron 45.0%
ATTGGATAGGGAGGTCAGAA+GGG - chr8_1:88907009-88907028 Msa1224150:intron 45.0%
GTTGCTCCAAAGATCGTATC+AGG + chr8_1:88907110-88907129 None:intergenic 45.0%
GATGAGATCAAGGAATGCTC+TGG + chr8_1:88907258-88907277 None:intergenic 45.0%
!!! GGTCACTCTTTTTTGAGGCA+AGG + chr8_1:88907414-88907433 None:intergenic 45.0%
AAAGAGTGACCTTGAGAGGA+CGG - chr8_1:88907423-88907442 Msa1224150:intron 45.0%
GAGCTTCAGAAGGAAAAGAC+TGG - chr8_1:88907445-88907464 Msa1224150:intron 45.0%
! GGGTGGCAGATTATGTTTTG+GGG - chr8_1:88907524-88907543 Msa1224150:intron 45.0%
!!! TGGCAGATTATGTTTTGGGG+AGG - chr8_1:88907527-88907546 Msa1224150:intron 45.0%
TCACCACATTGACCATGTCA+TGG + chr8_1:88907608-88907627 None:intergenic 45.0%
TGTGGTTACTGTGGCAGTTA+TGG - chr8_1:88907654-88907673 Msa1224150:intron 45.0%
TACTGTGGCAGTTATGGAAC+AGG - chr8_1:88907660-88907679 Msa1224150:intron 45.0%
TAATCGCGTGAATCATGTGC+CGG + chr8_1:88907702-88907721 None:intergenic 45.0%
!! GATAAAAGCATCGCTGAGTC+TGG - chr8_1:88907774-88907793 Msa1224150:CDS 45.0%
!!! TAAGGGACTGGCTTTTTGCT+CGG - chr8_1:88908042-88908061 Msa1224150:CDS 45.0%
ACCTATCCCTGTCATCTTCT+TGG - chr8_1:88908082-88908101 Msa1224150:CDS 45.0%
TCCAAGAAGATGACAGGGAT+AGG + chr8_1:88908086-88908105 None:intergenic 45.0%
CTGTCATCCAAGAAGATGAC+AGG + chr8_1:88908092-88908111 None:intergenic 45.0%
GTCATCTTCTTGGATGACAG+TGG - chr8_1:88908092-88908111 Msa1224150:CDS 45.0%
GCAATTCAGTCTCATCCAGA+GGG + chr8_1:88908127-88908146 None:intergenic 45.0%
GCCCCTTATTCTACCTGAAT+TGG - chr8_1:88908145-88908164 Msa1224150:CDS 45.0%
! GATTTTTCTCCCACAGGAAC+AGG - chr8_1:88908170-88908189 Msa1224150:CDS 45.0%
! TTTTTCTCCCACAGGAACAG+GGG - chr8_1:88908172-88908191 Msa1224150:CDS 45.0%
!! GGCATTGGCACAAATGTTGA+TGG - chr8_1:88908317-88908336 Msa1224150:five_prime_UTR 45.0%
! GAGGAGAAGAGTGTGATGAG+AGG + chr8_1:88904550-88904569 None:intergenic 50.0%
AGGGGGAATAATAGAGACGG+AGG + chr8_1:88904569-88904588 None:intergenic 50.0%
GGGAGGGGGAATAATAGAGA+CGG + chr8_1:88904572-88904591 None:intergenic 50.0%
GCCACTTGGGCTCAATTTCA+TGG + chr8_1:88904769-88904788 None:intergenic 50.0%
! TCCCAAAAACGCTGCCACTT+GGG + chr8_1:88904782-88904801 None:intergenic 50.0%
TCGACATGTTCCCTTACCCT+AGG - chr8_1:88904867-88904886 Msa1224150:intron 50.0%
AGTGGAGCTGGGTTACATGT+TGG - chr8_1:88904978-88904997 Msa1224150:CDS 50.0%
TCAGTCGCAGTGTATCCAAG+TGG + chr8_1:88905008-88905027 None:intergenic 50.0%
!! CCAAAAGCATCCCAACCCAT+TGG + chr8_1:88905077-88905096 None:intergenic 50.0%
!!! CCAATGGGTTGGGATGCTTT+TGG - chr8_1:88905074-88905093 Msa1224150:CDS 50.0%
TACCAGCATCCATGTGTCAG+TGG - chr8_1:88905290-88905309 Msa1224150:CDS 50.0%
TGGTCACAGTGGTGAGCTTT+GGG + chr8_1:88905433-88905452 None:intergenic 50.0%
TTGGTCACAGTGGTGAGCTT+TGG + chr8_1:88905434-88905453 None:intergenic 50.0%
GCCATGGGAAGCAAATCAAG+TGG + chr8_1:88906374-88906393 None:intergenic 50.0%
! AGTGCAGGGCACCAATTAAC+TGG + chr8_1:88906693-88906712 None:intergenic 50.0%
! GTTAATTGGTGCCCTGCACT+TGG - chr8_1:88906693-88906712 Msa1224150:intron 50.0%
TTATTGCCAAGCAGCCGATG+AGG - chr8_1:88906892-88906911 Msa1224150:intron 50.0%
TGCATATGCTGACCGTCTTC+TGG - chr8_1:88906935-88906954 Msa1224150:intron 50.0%
ATATGCTGACCGTCTTCTGG+AGG - chr8_1:88906938-88906957 Msa1224150:intron 50.0%
!! TTTAGATGACCTGGACTGGC+CGG - chr8_1:88906962-88906981 Msa1224150:intron 50.0%
TTGGATAGGGAGGTCAGAAG+GGG - chr8_1:88907010-88907029 Msa1224150:intron 50.0%
ACCAGGCCTGATACGATCTT+TGG - chr8_1:88907101-88907120 Msa1224150:intron 50.0%
TCCAAAGATCGTATCAGGCC+TGG + chr8_1:88907105-88907124 None:intergenic 50.0%
! TACATGCTTGCTCTGAGCAG+TGG + chr8_1:88907289-88907308 None:intergenic 50.0%
ATCTGCCACCCATATCGGAA+TGG + chr8_1:88907515-88907534 None:intergenic 50.0%
GGCATTACAACCCAGCGAAT+AGG + chr8_1:88907750-88907769 None:intergenic 50.0%
! AAGCATCGCTGAGTCTGGAA+AGG - chr8_1:88907779-88907798 Msa1224150:CDS 50.0%
! GAGTCTGGAAAGGCTTTTCC+AGG - chr8_1:88907789-88907808 Msa1224150:CDS 50.0%
! GGAAAGGCTTTTCCAGGTGA+AGG - chr8_1:88907795-88907814 Msa1224150:CDS 50.0%
! TTTTTGCTCGGCAGCGTTAC+TGG - chr8_1:88908054-88908073 Msa1224150:CDS 50.0%
! TTTTGCTCGGCAGCGTTACT+GGG - chr8_1:88908055-88908074 Msa1224150:CDS 50.0%
GGCAATTCAGTCTCATCCAG+AGG + chr8_1:88908128-88908147 None:intergenic 50.0%
TCTGGCTAAGGCAGTGTCTT+GGG - chr8_1:88908202-88908221 Msa1224150:CDS 50.0%
! AGCCCAAGTGGCAGCGTTTT+TGG - chr8_1:88904777-88904796 Msa1224150:intron 55.0%
! GCCCAAGTGGCAGCGTTTTT+GGG - chr8_1:88904778-88904797 Msa1224150:intron 55.0%
GTCCCAAAAACGCTGCCACT+TGG + chr8_1:88904783-88904802 None:intergenic 55.0%
AGCCACTGACACATGGATGC+TGG + chr8_1:88905295-88905314 None:intergenic 55.0%
TCCATGTGTCAGTGGCTGTC+AGG - chr8_1:88905298-88905317 Msa1224150:CDS 55.0%
ACCTGACAGCCACTGACACA+TGG + chr8_1:88905302-88905321 None:intergenic 55.0%
! ACAGGGGTCTGCTCTGGATT+TGG + chr8_1:88905975-88905994 None:intergenic 55.0%
!! GAGTTGTGGCGTTGGTTTCC+TGG - chr8_1:88906174-88906193 Msa1224150:intron 55.0%
TTACACTTTCCGGCCAGTCC+AGG + chr8_1:88906974-88906993 None:intergenic 55.0%
! TCTGAAGCTCCGTCCTCTCA+AGG + chr8_1:88907435-88907454 None:intergenic 55.0%
TGAGAGGACGGAGCTTCAGA+AGG - chr8_1:88907435-88907454 Msa1224150:intron 55.0%
ACGGGGAAGCCATTCCGATA+TGG - chr8_1:88907503-88907522 Msa1224150:intron 55.0%
CGGGGAAGCCATTCCGATAT+GGG - chr8_1:88907504-88907523 Msa1224150:intron 55.0%
GGAAGCCATTCCGATATGGG+TGG - chr8_1:88907507-88907526 Msa1224150:intron 55.0%
AGGAGCAATCATGGCTGTGC+CGG - chr8_1:88907680-88907699 Msa1224150:intron 55.0%
TTTGCTCGGCAGCGTTACTG+GGG - chr8_1:88908056-88908075 Msa1224150:CDS 55.0%
CAAGACACTGCCTTAGCCAG+AGG + chr8_1:88908203-88908222 None:intergenic 55.0%
CTCTGGCTAAGGCAGTGTCT+TGG - chr8_1:88908201-88908220 Msa1224150:CDS 55.0%
! TTGGTGCCCTGCACTTGGCA+CGG - chr8_1:88906698-88906717 Msa1224150:intron 60.0%
CCAACACCGTGCCAAGTGCA+GGG + chr8_1:88906707-88906726 None:intergenic 60.0%
!! TGGCACGGTGTTGGCCAATG+AGG - chr8_1:88906713-88906732 Msa1224150:intron 60.0%
!! CACGGTGTTGGCCAATGAGG+AGG - chr8_1:88906716-88906735 Msa1224150:intron 60.0%
GATGGTGTGAGTGAACGCGG+TGG - chr8_1:88906744-88906763 Msa1224150:intron 60.0%
! CCATTGCCTCATCGGCTGCT+TGG + chr8_1:88906901-88906920 None:intergenic 60.0%
CCAAGCAGCCGATGAGGCAA+TGG - chr8_1:88906898-88906917 Msa1224150:intron 60.0%
GAGGTCAGAAGGGGCTGAGT+TGG - chr8_1:88907019-88907038 Msa1224150:intron 60.0%
GGAATGGCTTCCCCGTTTGC+TGG + chr8_1:88907499-88907518 None:intergenic 60.0%
CAGTGGTGAGACTGTCCCTC+TGG - chr8_1:88908109-88908128 Msa1224150:CDS 60.0%
GACACTGCCTTAGCCAGAGG+AGG + chr8_1:88908200-88908219 None:intergenic 60.0%
CCCTGCACTTGGCACGGTGT+TGG - chr8_1:88906704-88906723 Msa1224150:intron 65.0%
GCCAACACCGTGCCAAGTGC+AGG + chr8_1:88906708-88906727 None:intergenic 65.0%
GGAGGCTCCCCTGTTCCTGT+GGG + chr8_1:88908182-88908201 None:intergenic 65.0%
AGGAGGCTCCCCTGTTCCTG+TGG + chr8_1:88908183-88908202 None:intergenic 65.0%
AGGAACAGGGGAGCCTCCTC+TGG - chr8_1:88908184-88908203 Msa1224150:CDS 65.0%
AGGGGAGCCTCCTCTGGCTA+AGG - chr8_1:88908190-88908209 Msa1224150:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 88904451 88908361 88904451 ID=Msa1224150;Name=Msa1224150
chr8_1 mRNA 88904451 88908361 88904451 ID=Msa1224150-mRNA-1;Parent=Msa1224150;Name=Msa1224150-mRNA-1;_AED=0.12;_eAED=0.12;_QI=70|0.88|0.8|1|1|1|10|0|592
chr8_1 exon 88904451 88904783 88904451 ID=Msa1224150-mRNA-1:exon:32348;Parent=Msa1224150-mRNA-1
chr8_1 exon 88904877 88905141 88904877 ID=Msa1224150-mRNA-1:exon:32347;Parent=Msa1224150-mRNA-1
chr8_1 exon 88905264 88905418 88905264 ID=Msa1224150-mRNA-1:exon:32346;Parent=Msa1224150-mRNA-1
chr8_1 exon 88905507 88905573 88905507 ID=Msa1224150-mRNA-1:exon:32345;Parent=Msa1224150-mRNA-1
chr8_1 exon 88905683 88905906 88905683 ID=Msa1224150-mRNA-1:exon:32344;Parent=Msa1224150-mRNA-1
chr8_1 exon 88906027 88906131 88906027 ID=Msa1224150-mRNA-1:exon:32343;Parent=Msa1224150-mRNA-1
chr8_1 exon 88906233 88906352 88906233 ID=Msa1224150-mRNA-1:exon:32342;Parent=Msa1224150-mRNA-1
chr8_1 exon 88907337 88907393 88907337 ID=Msa1224150-mRNA-1:exon:32341;Parent=Msa1224150-mRNA-1
chr8_1 exon 88907748 88907832 88907748 ID=Msa1224150-mRNA-1:exon:32340;Parent=Msa1224150-mRNA-1
chr8_1 exon 88907924 88908361 88907924 ID=Msa1224150-mRNA-1:exon:32339;Parent=Msa1224150-mRNA-1
chr8_1 five_prime_UTR 88908292 88908361 88908292 ID=Msa1224150-mRNA-1:five_prime_utr;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88907924 88908291 88907924 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88907748 88907832 88907748 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88907337 88907393 88907337 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88906233 88906352 88906233 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88906027 88906131 88906027 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88905683 88905906 88905683 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88905507 88905573 88905507 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88905264 88905418 88905264 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88904877 88905141 88904877 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
chr8_1 CDS 88904451 88904783 88904451 ID=Msa1224150-mRNA-1:cds;Parent=Msa1224150-mRNA-1
Gene Sequence

>Msa1224150

ATGCTTCATCTCAACAATGTCCAATTCCTCTCATCACACTCTTCTCCTCCGTCTCTATTATTCCCCCTCCCTTCCTCAAAATTCAGCACCGTTCCTTTTCCCACACCATTCAGAAGAACAACATCTTCTTCTACTCTCAGATTCCGCAGTCACAGTCACAGTTGTAGAATCAGAAACTCGGCAACAAATGATAAACTGAACGAAACGGAGCAGAAGAAGAAGCCTGTTAACAGAGCTTATCCTTTCCATGAAATTGAGCCCAAGTGGCAGCGTTTTTGGGACGAATTTCGCACTTTCAGAACTCCAGATGATGATATCGATACATCAAAACCTAAATATTATATTCTCGACATGTTCCCTTACCCTAGTGGAGCTGGGTTACATGTTGGACATCCACTTGGATACACTGCGACTGATATTCTAGCTAGGTTTAAACGAATGCAAGGATATAATACAGGAACTCACCCAAAGCTCACCACTGTGACCAATATTAATCGCTTTACTTCTCAGTTGAAATCATTAGGATTCTCATATGACTGGGATCGTGAAATATCAACCATAGAACCTGAATATTACAAATGGACTCAATGGATCTTTCTACAGCTTTTAAAGAGAGGATTGGCATATCAGGCTGAAGTTCCAGTTAATTGGTGCCCTGCACTTGGCACGGTGTTGGCCAATGAGGAGGTTATTGATGGTGTGAGTGAACGCGGTGGTCATCCTGTAGTAAGAAAGCCGATGAGGCAATGGATGCTCAAGATTACTGCATATGCTGACCGTCTTCTGGAGGATTTAGATGACCTGGACTGGCCGGAAAGTGTAAAAGAAATGCAGAGAAATTGGATAGGGAGGTCAGAAGGGGCTGAGTTGGATTTTTGCATTCTTGATGGTGATGGAAAGGAGAGAGACACGCAGATTACTGTGTATACTACCAGGCCTGATACGATCTTTGGAGCAACTTACTTGGTTGTGGCACCAGAGCATTCCTTGATCTCATCATTGATTTCCACTGCTCAGAGCAAGCATGTAGAAGATTATATTGACCTTGCCTCAAAAAAGAGTGACCTTGAGAGGACGGAGCTTCAGAAGGAAAAGACTGGAGTCTTTACTGGTTGTTATGCAAAAAATCCAGCAAACGGGGAAGCCATTCCGATATGGGTGGCAGATTATGTTTTGGGGAGTTATGGAACAGGAGCAATCATGGCTGTGCCGGCACATGATTCACGCGATTATGAGTTTGCTTTGAAATATGACATTCCTATTCGCTGGGTTGTAATGCCAGATGATAAAAGCATCGCTGAGTCTGGAAAGGCTTTTCCAGGTGAAGGCATTATTGCAAATTCATCAAATACGTTAATGGGGCTTGACATTAATGGCTTGCGTAGCAAAGAAGCAGCTCTAAAAGTCATTGATTGGGCAGAAAAAAGTGGAAATGGAAAGAGAAAGGTGAACTACAAGTTAAGGGACTGGCTTTTTGCTCGGCAGCGTTACTGGGGCGAACCTATCCCTGTCATCTTCTTGGATGACAGTGGTGAGACTGTCCCTCTGGATGAGACTGAATTGCCCCTTATTCTACCTGAATTGGATGATTTTTCTCCCACAGGAACAGGGGAGCCTCCTCTGGCTAAGGCAGTGTCTTGGGTAAGCTTATACCAAATACAAATCGTTACTTTGCTTCTGCATACTTTGTTATCAAGATATAATGGCAATTGGATGCCTTTTTATCATTTCTTTGGCATTGGCACAAATGTTGATGGTTTACCGAAATCTCACTATTAA

Protein sequence

>Msa1224150

MLHLNNVQFLSSHSSPPSLLFPLPSSKFSTVPFPTPFRRTTSSSTLRFRSHSHSCRIRNSATNDKLNETEQKKKPVNRAYPFHEIEPKWQRFWDEFRTFRTPDDDIDTSKPKYYILDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGYNTGTHPKLTTVTNINRFTSQLKSLGFSYDWDREISTIEPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDGVSERGGHPVVRKPMRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAELDFCILDGDGKERDTQITVYTTRPDTIFGATYLVVAPEHSLISSLISTAQSKHVEDYIDLASKKSDLERTELQKEKTGVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDIPIRWVVMPDDKSIAESGKAFPGEGIIANSSNTLMGLDINGLRSKEAALKVIDWAEKSGNGKRKVNYKLRDWLFARQRYWGEPIPVIFLDDSGETVPLDETELPLILPELDDFSPTGTGEPPLAKAVSWVSLYQIQIVTLLLHTLLSRYNGNWMPFYHFFGIGTNVDGLPKSHY*