AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0538100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0538100 MtrunA17_Chr4g0001421 96.939 294 8 1 1 294 1 293 0.0 575
Msa0538100 MtrunA17_Chr2g0333871 77.627 295 60 3 1 294 1 290 8.42e-158 441
Msa0538100 MtrunA17_Chr1g0210741 62.264 212 80 0 83 294 69 280 2.49e-96 285
Msa0538100 MtrunA17_Chr7g0224571 25.373 201 117 5 88 281 15 189 9.11e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0538100 AT1G16880.1 74.016 254 64 2 41 294 39 290 2.24e-133 380
Msa0538100 AT5G04740.1 62.673 217 81 0 78 294 85 301 3.27e-100 296
Msa0538100 AT1G16880.2 69.753 162 39 4 41 198 39 194 7.22e-71 218
Msa0538100 AT5G04740.2 59.664 119 48 0 176 294 82 200 1.00e-48 161
Msa0538100 AT3G01990.8 25.871 201 117 5 88 281 16 191 1.33e-11 64.3
Msa0538100 AT3G01990.3 25.871 201 117 5 88 281 30 205 1.35e-11 64.7
Msa0538100 AT3G01990.2 25.871 201 117 5 88 281 30 205 1.53e-11 64.7
Msa0538100 AT3G01990.9 25.871 201 117 5 88 281 16 191 1.53e-11 64.3
Msa0538100 AT3G01990.4 25.871 201 117 5 88 281 30 205 1.63e-11 64.3
Msa0538100 AT3G01990.10 25.871 201 117 5 88 281 16 191 1.91e-11 64.7
Msa0538100 AT3G01990.1 25.871 201 117 5 88 281 16 191 1.91e-11 64.7
Msa0538100 AT3G01990.11 25.871 201 117 5 88 281 16 191 1.96e-11 64.7
Msa0538100 AT3G01990.7 25.871 201 117 5 88 281 30 205 2.10e-11 64.3
Msa0538100 AT3G01990.5 25.871 201 117 5 88 281 30 205 2.10e-11 64.3
Msa0538100 AT3G01990.6 25.871 201 117 5 88 281 30 205 2.20e-11 64.3

Find 80 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATAAAATACTGTATTTA+TGG 0.151469 4_1:+17181376 Msa0538100:three_prime_UTR
TTTGTCAGGTTGTTGTCTTC+TGG 0.190236 4_1:+17177871 Msa0538100:intron
CTTTAAATGCTGCTGATATT+TGG 0.198365 4_1:+17181300 Msa0538100:three_prime_UTR
TGATAATAGTTTGAGAGTTT+TGG 0.215649 4_1:+17176809 Msa0538100:CDS
AGATTCATCACCTGCTCTTT+TGG 0.222017 4_1:-17179382 None:intergenic
TCTTGGTCAATTATGACTAT+TGG 0.255614 4_1:-17178118 None:intergenic
ATGTCAAATTTGTAAGAATT+AGG 0.273115 4_1:-17176655 None:intergenic
AATCATAAAACTGAATTAAC+AGG 0.273586 4_1:+17181223 Msa0538100:three_prime_UTR
TTAGCAATGGGAGCAGCTTT+TGG 0.275092 4_1:+17179349 Msa0538100:CDS
CTTGGTCAATTATGACTATT+GGG 0.278108 4_1:-17178117 None:intergenic
ATTGACATTGCTGTTGAATC+TGG 0.326851 4_1:+17180010 Msa0538100:CDS
GTTTGCATTCATTGTTTCAT+TGG 0.328185 4_1:+17181167 Msa0538100:three_prime_UTR
GAGGAGAAATGAAGAATAAC+TGG 0.343325 4_1:+17181190 Msa0538100:three_prime_UTR
TTTGCATTCATTGTTTCATT+GGG 0.396621 4_1:+17181168 Msa0538100:three_prime_UTR
TGTTTGAACCTAGGGGCTCT+TGG 0.406397 4_1:+17180514 Msa0538100:intron
ATCTCCACCACAGTTGCATC+TGG 0.413372 4_1:-17178148 None:intergenic
CTTAGGCCTCAATGTTGTTA+AGG 0.415434 4_1:+17178309 Msa0538100:CDS
GTTACTTTCTTCACAAAAGA+AGG 0.417045 4_1:+17176898 Msa0538100:CDS
GCTATGAGTGCTTTGAGACT+TGG 0.418351 4_1:+17176765 Msa0538100:CDS
AGTACCTGCACATCAGTAAC+AGG 0.440436 4_1:-17177922 None:intergenic
GAGGGCATGAATGAAAGTTT+TGG 0.442821 4_1:+17181400 Msa0538100:three_prime_UTR
AAACTGGATTCCTCAGTTGC+CGG 0.443051 4_1:-17181060 None:intergenic
GGAAGATCCAGAGTTGTTAG+AGG 0.470609 4_1:+17179154 Msa0538100:CDS
AGATTAAAGTTACCTGCTGC+AGG 0.475170 4_1:-17180586 None:intergenic
TGGAGATAACTTTCGGTGAT+CGG 0.475265 4_1:+17178164 Msa0538100:CDS
CGAATTGCCTCTAACAACTC+TGG 0.479030 4_1:-17179161 None:intergenic
GCTTCATTAACTCTAGGACT+TGG 0.480271 4_1:-17181449 None:intergenic
CGAATGCATTACCTTCGATC+TGG 0.482009 4_1:-17179770 None:intergenic
AATCAGCAAGCCCCTGCAGC+AGG 0.483771 4_1:+17180574 Msa0538100:CDS
CTCTCTGCTTCATTAACTCT+AGG 0.486414 4_1:-17181455 None:intergenic
GTGGAGACAGCTGATCGGCC+TGG 0.489025 4_1:+17179953 Msa0538100:CDS
AATAAAGTAAAATAAGAGAC+AGG 0.493335 4_1:-17176536 None:intergenic
TTCATATGAATGAAACAAAA+CGG 0.504007 4_1:-17176620 None:intergenic
ATAACTTTCGGTGATCGGCT+TGG 0.510246 4_1:+17178169 Msa0538100:CDS
TCAAGTTCTCAGTTAGCAAT+GGG 0.515912 4_1:+17179337 Msa0538100:CDS
CAGTGATACTGGCCGAAAAG+TGG 0.519005 4_1:+17179133 Msa0538100:intron
GGATATCAGGGTGGAAATCA+AGG 0.522473 4_1:+17178073 Msa0538100:intron
GAGATATTTCTTGAGGCGTC+CGG 0.523812 4_1:+17181041 Msa0538100:CDS
AAGTTTCATGTTAGCTACAA+AGG 0.527152 4_1:+17180545 Msa0538100:CDS
CACATAAACATATCCGATGA+TGG 0.529758 4_1:+17179746 Msa0538100:CDS
GCATTCATTGTTTCATTGGG+AGG 0.530901 4_1:+17181171 Msa0538100:three_prime_UTR
AGCACCTGTTACTGATGTGC+AGG 0.531571 4_1:+17177918 Msa0538100:CDS
AATCTCCAGTTATTGAAAAG+TGG 0.534195 4_1:-17181426 None:intergenic
TTGCATCTGGATCCAAGTCT+TGG 0.535486 4_1:-17178135 None:intergenic
AAAATACTGTATTTATGGTG+AGG 0.545823 4_1:+17181381 Msa0538100:three_prime_UTR
CCTTCGATCTGGACCATCAT+CGG 0.546047 4_1:-17179759 None:intergenic
ATCAAGTTCTCAGTTAGCAA+TGG 0.546569 4_1:+17179336 Msa0538100:CDS
AAATACTGTATTTATGGTGA+GGG 0.549877 4_1:+17181382 Msa0538100:three_prime_UTR
TTGTTTCATTCATATGAATG+TGG 0.556654 4_1:+17176625 Msa0538100:five_prime_UTR
ATTAAAGTTACCTGCTGCAG+GGG 0.562709 4_1:-17180584 None:intergenic
ACAAGATCGACAAGTAATCC+AGG 0.566828 4_1:-17179971 None:intergenic
CATTTGCCTTAACAACATTG+AGG 0.567718 4_1:-17178315 None:intergenic
AGTCATAATTGACCAAGACT+TGG 0.567923 4_1:+17178123 Msa0538100:CDS
GTAACAGGTGCTGCCGCTCG+AGG 0.568447 4_1:-17177907 None:intergenic
CAAGAAATATCTCAAGCTGT+TGG 0.569442 4_1:-17181031 None:intergenic
AGTATAACACCACCATGGAT+TGG 0.571048 4_1:+17181139 Msa0538100:three_prime_UTR
CTTGAGGCGTCCGGCAACTG+AGG 0.581879 4_1:+17181050 Msa0538100:CDS
TAACAGGTGCTGCCGCTCGA+GGG 0.586405 4_1:-17177906 None:intergenic
AATTGTCATTCAGGTTGATG+TGG 0.589579 4_1:+17179712 Msa0538100:intron
GATTAAAGTTACCTGCTGCA+GGG 0.589784 4_1:-17180585 None:intergenic
ACTTCTACCTCCAAAAGAGC+AGG 0.595122 4_1:+17179372 Msa0538100:CDS
CCGATGATGGTCCAGATCGA+AGG 0.598336 4_1:+17179759 Msa0538100:CDS
TGCAAACATTCACCAATCCA+TGG 0.598744 4_1:-17181151 None:intergenic
AGTAAAATAAGAGACAGGAA+TGG 0.599760 4_1:-17176531 None:intergenic
ACAGCTTGAGATATTTCTTG+AGG 0.602665 4_1:+17181034 Msa0538100:CDS
TCAATTATGACTATTGGGGT+CGG 0.614778 4_1:-17178112 None:intergenic
TATGACTATTGGGGTCGGAA+CGG 0.615998 4_1:-17178107 None:intergenic
CTCCAGTTATTGAAAAGTGG+TGG 0.630012 4_1:-17181423 None:intergenic
ACTGTGGTGGAGATAACTTT+CGG 0.631847 4_1:+17178157 Msa0538100:CDS
TCTATGTGGAGACAGCTGAT+CGG 0.632715 4_1:+17179948 Msa0538100:CDS
ATCATAAAACTGAATTAACA+GGG 0.638526 4_1:+17181224 Msa0538100:three_prime_UTR
TTGGTCAATTATGACTATTG+GGG 0.653500 4_1:-17178116 None:intergenic
TTTGGAGTATAACACCACCA+TGG 0.661005 4_1:+17181134 Msa0538100:three_prime_UTR
CTTGGATCCAGATGCAACTG+TGG 0.661276 4_1:+17178141 Msa0538100:CDS
AACTACTATTATCCCTCGAG+CGG 0.661528 4_1:+17177894 Msa0538100:CDS
ATGAGTGCATTAAAAGACTT+AGG 0.662772 4_1:+17178292 Msa0538100:CDS
TAATCTGATTCAGTATCACC+CGG 0.667172 4_1:+17179199 Msa0538100:CDS
GGATCCAGATGCAACTGTGG+TGG 0.679796 4_1:+17178144 Msa0538100:CDS
ATCTGGAGAATTTGACACTG+AGG 0.685475 4_1:+17180027 Msa0538100:CDS
AAACATTCACCAATCCATGG+TGG 0.770447 4_1:-17181148 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATATATTCAAAAGT+GGG - chr4_1:17177518-17177537 None:intergenic 10.0%
!! AAAAAATATATATTCAAAAG+TGG - chr4_1:17177519-17177538 None:intergenic 10.0%
!! AAAATAAAATACTGTATTTA+TGG + chr4_1:17181376-17181395 Msa0538100:three_prime_UTR 10.0%
!!! ATCATTTTGAACTAAAAAAA+TGG + chr4_1:17176737-17176756 Msa0538100:exon 15.0%
!!! TTAAATCTTGAATTATTTTG+AGG - chr4_1:17177333-17177352 None:intergenic 15.0%
!!! ATTTTTTTACAAAATTGTAG+TGG + chr4_1:17177532-17177551 Msa0538100:intron 15.0%
!! ATTAATTAAGTTAGTAGATT+AGG + chr4_1:17177699-17177718 Msa0538100:intron 15.0%
!!! TTATTTTTGTTTCTTTTATG+TGG + chr4_1:17178052-17178071 Msa0538100:intron 15.0%
!!! TAAGCTATTTCTATAATAAA+AGG + chr4_1:17178712-17178731 Msa0538100:intron 15.0%
!!! AAACAATTTGACTTTTTTTT+TGG - chr4_1:17178761-17178780 None:intergenic 15.0%
!!! TTCTGTAATGTATATTTTAT+TGG - chr4_1:17179530-17179549 None:intergenic 15.0%
!!! ATCTTGATTTTTTATCATTT+AGG - chr4_1:17180875-17180894 None:intergenic 15.0%
!! AATAAAGTAAAATAAGAGAC+AGG - chr4_1:17176539-17176558 None:intergenic 20.0%
!! TTCATATGAATGAAACAAAA+CGG - chr4_1:17176623-17176642 None:intergenic 20.0%
!! ATGTCAAATTTGTAAGAATT+AGG - chr4_1:17176658-17176677 None:intergenic 20.0%
!! ATAAGATGATTTGATTATGT+TGG + chr4_1:17176952-17176971 Msa0538100:intron 20.0%
!! TCATAAATCATATCTATGAA+TGG - chr4_1:17177111-17177130 None:intergenic 20.0%
!! TGTATTGCTTATGTTAATTA+TGG + chr4_1:17177590-17177609 Msa0538100:intron 20.0%
!! TTGAATTTCTAATACTGTTT+AGG - chr4_1:17178989-17179008 None:intergenic 20.0%
!! TTCTGTAAATTGAAAAGATA+AGG + chr4_1:17179467-17179486 Msa0538100:intron 20.0%
!! TCTGTAAATTGAAAAGATAA+GGG + chr4_1:17179468-17179487 Msa0538100:intron 20.0%
!! TGTTAAAGTCATGATATATA+AGG + chr4_1:17179845-17179864 Msa0538100:intron 20.0%
!! ATATGTTTGGTAAATTGTAA+TGG - chr4_1:17180852-17180871 None:intergenic 20.0%
!!! TTTATCATTTAGGATATGTT+TGG - chr4_1:17180865-17180884 None:intergenic 20.0%
!!! CATGACATTATATTTTCTTT+TGG + chr4_1:17181116-17181135 Msa0538100:three_prime_UTR 20.0%
!! AATCATAAAACTGAATTAAC+AGG + chr4_1:17181223-17181242 Msa0538100:three_prime_UTR 20.0%
!! ATCATAAAACTGAATTAACA+GGG + chr4_1:17181224-17181243 Msa0538100:three_prime_UTR 20.0%
! TTGTTTCATTCATATGAATG+TGG + chr4_1:17176625-17176644 Msa0538100:five_prime_UTR 25.0%
!!! AAGTTAGGATTTTGAGAAAT+GGG - chr4_1:17176694-17176713 None:intergenic 25.0%
!!! AAAGTTAGGATTTTGAGAAA+TGG - chr4_1:17176695-17176714 None:intergenic 25.0%
! CAAAGAAAAGAGAAAAAGTT+AGG - chr4_1:17176709-17176728 None:intergenic 25.0%
! TTGAACTAAAAAAATGGCTA+TGG + chr4_1:17176743-17176762 Msa0538100:exon 25.0%
!! TGATAATAGTTTGAGAGTTT+TGG + chr4_1:17176809-17176828 Msa0538100:CDS 25.0%
!!! AACAAGAAGCATTCAAAAAA+GGG - chr4_1:17176854-17176873 None:intergenic 25.0%
!! TTAGAATTTGAGCTTTTAGT+TGG + chr4_1:17177008-17177027 Msa0538100:intron 25.0%
! AAAATAGTTCTTCTGATTCA+CGG - chr4_1:17177188-17177207 None:intergenic 25.0%
! TATTCAAAAGTGGGTATAAT+TGG - chr4_1:17177509-17177528 None:intergenic 25.0%
! GGAACTCATTTACTTATATT+TGG + chr4_1:17177553-17177572 Msa0538100:intron 25.0%
! TTCTTCATGAAAATATGACA+AGG - chr4_1:17177653-17177672 None:intergenic 25.0%
! ATTAAGTTAGTAGATTAGGT+TGG + chr4_1:17177703-17177722 Msa0538100:intron 25.0%
!! AATAGTAAACGTTTGAAACT+TGG + chr4_1:17177769-17177788 Msa0538100:intron 25.0%
!! ATAGTAAACGTTTGAAACTT+GGG + chr4_1:17177770-17177789 Msa0538100:intron 25.0%
! ATACAATTAACACACAGAAA+TGG - chr4_1:17177837-17177856 None:intergenic 25.0%
!! TTTCTTTTATGTGGATATCA+GGG + chr4_1:17178061-17178080 Msa0538100:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr4_1:17178662-17178681 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr4_1:17178663-17178682 None:intergenic 25.0%
!! ATATCATAAGTTGTTTCCAT+TGG + chr4_1:17178825-17178844 Msa0538100:intron 25.0%
! TCAAATAAGTCAATCCAAAT+AGG + chr4_1:17178890-17178909 Msa0538100:intron 25.0%
! ATTTCTAATACTGTTTAGGT+AGG - chr4_1:17178985-17179004 None:intergenic 25.0%
!! CAAGATATTTGTTGCTTAAA+AGG - chr4_1:17179055-17179074 None:intergenic 25.0%
!! CTTTTAAGCAACAAATATCT+TGG + chr4_1:17179053-17179072 Msa0538100:intron 25.0%
!! AATTTTCAAATCGATGATTC+AGG + chr4_1:17179312-17179331 Msa0538100:intron 25.0%
! TTATTGGTGAAAAATGAAAC+AGG - chr4_1:17179514-17179533 None:intergenic 25.0%
! ATACATTACAGAAGACATTA+TGG + chr4_1:17179537-17179556 Msa0538100:intron 25.0%
! TTCTTTCTATTTGTGATAGA+GGG - chr4_1:17179680-17179699 None:intergenic 25.0%
! TTTCTTTCTATTTGTGATAG+AGG - chr4_1:17179681-17179700 None:intergenic 25.0%
! ATACTCATGCTTTCTAATTT+CGG + chr4_1:17179878-17179897 Msa0538100:intron 25.0%
!!! ATTTTGTAGTTTGTTCTATG+TGG + chr4_1:17179934-17179953 Msa0538100:intron 25.0%
!!! GATACATTCATTTTGAGTAA+TGG - chr4_1:17180119-17180138 None:intergenic 25.0%
! TCCTACTATTCAATGAATTA+GGG - chr4_1:17180368-17180387 None:intergenic 25.0%
! TTCCTACTATTCAATGAATT+AGG - chr4_1:17180369-17180388 None:intergenic 25.0%
! GATTGTTAGAATAGAAAATC+TGG - chr4_1:17180430-17180449 None:intergenic 25.0%
! TGAGCTTCAAAAAAAAAAGA+AGG + chr4_1:17180461-17180480 Msa0538100:intron 25.0%
! GAGCTTCAAAAAAAAAAGAA+GGG + chr4_1:17180462-17180481 Msa0538100:intron 25.0%
! AGCTTCAAAAAAAAAAGAAG+GGG + chr4_1:17180463-17180482 Msa0538100:intron 25.0%
! ATGATTAAAGTAGATTTGTC+TGG + chr4_1:17180713-17180732 Msa0538100:intron 25.0%
! CTATAAACTATACGCTATAA+GGG - chr4_1:17180806-17180825 None:intergenic 25.0%
! TTTGCATTCATTGTTTCATT+GGG + chr4_1:17181168-17181187 Msa0538100:three_prime_UTR 25.0%
! AAAATACTGTATTTATGGTG+AGG + chr4_1:17181381-17181400 Msa0538100:three_prime_UTR 25.0%
! AAATACTGTATTTATGGTGA+GGG + chr4_1:17181382-17181401 Msa0538100:three_prime_UTR 25.0%
AGTAAAATAAGAGACAGGAA+TGG - chr4_1:17176534-17176553 None:intergenic 30.0%
!!! AAACGGTTGTTTCTGTTTTT+TGG - chr4_1:17176606-17176625 None:intergenic 30.0%
AAAAAAGGGACACAGAAAAT+GGG - chr4_1:17176840-17176859 None:intergenic 30.0%
!! GAACAAGAAGCATTCAAAAA+AGG - chr4_1:17176855-17176874 None:intergenic 30.0%
! TTTTTGAATGCTTCTTGTTC+TGG + chr4_1:17176855-17176874 Msa0538100:CDS 30.0%
! TTTTGAATGCTTCTTGTTCT+GGG + chr4_1:17176856-17176875 Msa0538100:CDS 30.0%
! CTTTTGTGAAGAAAGTAACA+TGG - chr4_1:17176897-17176916 None:intergenic 30.0%
! GTTACTTTCTTCACAAAAGA+AGG + chr4_1:17176898-17176917 Msa0538100:CDS 30.0%
!! GGTAAATTAGCTTTGATCAT+TGG + chr4_1:17176919-17176938 Msa0538100:intron 30.0%
!! CTTTGATCATTGGTTGATTT+TGG + chr4_1:17176929-17176948 Msa0538100:intron 30.0%
ACAACGTCATAATACATACT+CGG - chr4_1:17177134-17177153 None:intergenic 30.0%
! GAGGTGTATTTTCGAAATAT+CGG - chr4_1:17177314-17177333 None:intergenic 30.0%
GAAAAGATTCATGTGCAAAA+TGG + chr4_1:17177369-17177388 Msa0538100:intron 30.0%
AACATAAGCAATACAAGCAA+AGG - chr4_1:17177585-17177604 None:intergenic 30.0%
CAGAAATGGACATATTACTT+AGG - chr4_1:17177823-17177842 None:intergenic 30.0%
GCATTATAGAGATGAACTAT+GGG - chr4_1:17178000-17178019 None:intergenic 30.0%
AGCATTATAGAGATGAACTA+TGG - chr4_1:17178001-17178020 None:intergenic 30.0%
! TTTTTACCGATCAACAAACA+CGG - chr4_1:17178030-17178049 None:intergenic 30.0%
! GTTTCTTTTATGTGGATATC+AGG + chr4_1:17178060-17178079 Msa0538100:intron 30.0%
TTGGTCAATTATGACTATTG+GGG - chr4_1:17178119-17178138 None:intergenic 30.0%
CTTGGTCAATTATGACTATT+GGG - chr4_1:17178120-17178139 None:intergenic 30.0%
TCTTGGTCAATTATGACTAT+TGG - chr4_1:17178121-17178140 None:intergenic 30.0%
!!! TATCTGTTGCTTTTTCTTAG+AGG + chr4_1:17178247-17178266 Msa0538100:intron 30.0%
!!! ATCTGTTGCTTTTTCTTAGA+GGG + chr4_1:17178248-17178267 Msa0538100:intron 30.0%
ATGAGTGCATTAAAAGACTT+AGG + chr4_1:17178292-17178311 Msa0538100:CDS 30.0%
! TGTTAAGGCAAATGTTTTTC+TGG + chr4_1:17178324-17178343 Msa0538100:CDS 30.0%
! AATGTTTTTCTGGATTCTTC+TGG + chr4_1:17178334-17178353 Msa0538100:CDS 30.0%
AATATCTGAGAGTTTCAGTT+GGG - chr4_1:17178556-17178575 None:intergenic 30.0%
!! TATTTTATTTACTCCACCAC+TGG + chr4_1:17178579-17178598 Msa0538100:intron 30.0%
TGATGAATCTCTTTACTTCT+CGG + chr4_1:17179395-17179414 Msa0538100:intron 30.0%
! TGTGAATTTTTCATTCTCTC+TGG + chr4_1:17179432-17179451 Msa0538100:intron 30.0%
TTCATTACCAATTGTCATTC+AGG + chr4_1:17179703-17179722 Msa0538100:intron 30.0%
GAATGTATCAATGTTGAGTA+TGG + chr4_1:17180130-17180149 Msa0538100:intron 30.0%
ACCCTAATTCATTGAATAGT+AGG + chr4_1:17180364-17180383 Msa0538100:intron 30.0%
!!! ACAAAGCTTTTTCATCAGAT+TGG - chr4_1:17180497-17180516 None:intergenic 30.0%
!! AAAAAGCTTTGTTTGAACCT+AGG + chr4_1:17180505-17180524 Msa0538100:intron 30.0%
!! AAAAGCTTTGTTTGAACCTA+GGG + chr4_1:17180506-17180525 Msa0538100:intron 30.0%
AAGTTTCATGTTAGCTACAA+AGG + chr4_1:17180545-17180564 Msa0538100:CDS 30.0%
TTTAATCGTCAAGTACTCTT+TGG + chr4_1:17180639-17180658 Msa0538100:intron 30.0%
TGTTATTCGTTGTAAGCTAA+TGG - chr4_1:17180675-17180694 None:intergenic 30.0%
AAGTAGATTTGTCTGGTAAA+CGG + chr4_1:17180720-17180739 Msa0538100:intron 30.0%
GCTATAAACTATACGCTATA+AGG - chr4_1:17180807-17180826 None:intergenic 30.0%
AACTCATAGTACATTGAAGT+AGG + chr4_1:17180903-17180922 Msa0538100:intron 30.0%
GTTTGCATTCATTGTTTCAT+TGG + chr4_1:17181167-17181186 Msa0538100:three_prime_UTR 30.0%
CTTTAAATGCTGCTGATATT+TGG + chr4_1:17181300-17181319 Msa0538100:three_prime_UTR 30.0%
AATCTCCAGTTATTGAAAAG+TGG - chr4_1:17181429-17181448 None:intergenic 30.0%
CAAAAAAGGGACACAGAAAA+TGG - chr4_1:17176841-17176860 None:intergenic 35.0%
AATGGATACGCACTATCAAT+TGG + chr4_1:17177387-17177406 Msa0538100:intron 35.0%
AGCACGATTACCAATATCTT+CGG - chr4_1:17177428-17177447 None:intergenic 35.0%
CAAACAAGTCATATACCACT+GGG - chr4_1:17177473-17177492 None:intergenic 35.0%
ACAAACAAGTCATATACCAC+TGG - chr4_1:17177474-17177493 None:intergenic 35.0%
TAAGCAATACAAGCAAAGGA+AGG - chr4_1:17177581-17177600 None:intergenic 35.0%
TTACTGCTCTTTCTTTCGTT+TGG + chr4_1:17177743-17177762 Msa0538100:intron 35.0%
AAGACAACAACCTGACAAAA+GGG - chr4_1:17177870-17177889 None:intergenic 35.0%
GCAAATAACGACAATCACAT+AGG - chr4_1:17177960-17177979 None:intergenic 35.0%
TCAATTATGACTATTGGGGT+CGG - chr4_1:17178115-17178134 None:intergenic 35.0%
AGTCATAATTGACCAAGACT+TGG + chr4_1:17178123-17178142 Msa0538100:CDS 35.0%
CATTTGCCTTAACAACATTG+AGG - chr4_1:17178318-17178337 None:intergenic 35.0%
! TAACACTTACGCTTTTGTGA+TGG - chr4_1:17178377-17178396 None:intergenic 35.0%
GAATATCTGAGAGTTTCAGT+TGG - chr4_1:17178557-17178576 None:intergenic 35.0%
TTAGAGTAGATGGTGCAATT+AGG - chr4_1:17178635-17178654 None:intergenic 35.0%
TATCTATAAGTTCTCCACGA+TGG - chr4_1:17178806-17178825 None:intergenic 35.0%
! TGTTTAGCTCGCATAAAGAA+AGG - chr4_1:17178916-17178935 None:intergenic 35.0%
AGCAACAAATATCTTGGATG+AGG + chr4_1:17179059-17179078 Msa0538100:intron 35.0%
TCGCTTCTTTAGTAATTCCT+TGG + chr4_1:17179089-17179108 Msa0538100:intron 35.0%
CGCTTCTTTAGTAATTCCTT+GGG + chr4_1:17179090-17179109 Msa0538100:intron 35.0%
TAATCTGATTCAGTATCACC+CGG + chr4_1:17179199-17179218 Msa0538100:CDS 35.0%
TGGTTGTAATATATGCCAAC+AGG + chr4_1:17179264-17179283 Msa0538100:intron 35.0%
ATCAAGTTCTCAGTTAGCAA+TGG + chr4_1:17179336-17179355 Msa0538100:CDS 35.0%
TCAAGTTCTCAGTTAGCAAT+GGG + chr4_1:17179337-17179356 Msa0538100:CDS 35.0%
TTTCTATTTGTGATAGAGGG+AGG - chr4_1:17179677-17179696 None:intergenic 35.0%
ACATCAACCTGAATGACAAT+TGG - chr4_1:17179713-17179732 None:intergenic 35.0%
!! AATTGTCATTCAGGTTGATG+TGG + chr4_1:17179712-17179731 Msa0538100:intron 35.0%
CACATAAACATATCCGATGA+TGG + chr4_1:17179746-17179765 Msa0538100:CDS 35.0%
! ATTGACATTGCTGTTGAATC+TGG + chr4_1:17180010-17180029 Msa0538100:CDS 35.0%
TTTGTTGGGTTACAACTATG+AGG + chr4_1:17180238-17180257 Msa0538100:intron 35.0%
TTGTTGGGTTACAACTATGA+GGG + chr4_1:17180239-17180258 Msa0538100:intron 35.0%
!! AAAGCTTTGTTTGAACCTAG+GGG + chr4_1:17180507-17180526 Msa0538100:intron 35.0%
ATTTGTCTGGTAAACGGTAA+TGG + chr4_1:17180726-17180745 Msa0538100:intron 35.0%
CTTCATATTTACCATGTTGC+AGG + chr4_1:17181002-17181021 Msa0538100:intron 35.0%
CAAGAAATATCTCAAGCTGT+TGG - chr4_1:17181034-17181053 None:intergenic 35.0%
ACAGCTTGAGATATTTCTTG+AGG + chr4_1:17181034-17181053 Msa0538100:CDS 35.0%
! TGAGGAATCCAGTTTTTGAA+GGG + chr4_1:17181068-17181087 Msa0538100:exon 35.0%
GAGGAGAAATGAAGAATAAC+TGG + chr4_1:17181190-17181209 Msa0538100:three_prime_UTR 35.0%
CTCGTATGTACCGAAGATAT+TGG + chr4_1:17177415-17177434 Msa0538100:intron 40.0%
! GTACTATGTACCCTTTTGTC+AGG + chr4_1:17177857-17177876 Msa0538100:intron 40.0%
GAAGACAACAACCTGACAAA+AGG - chr4_1:17177871-17177890 None:intergenic 40.0%
! TTTGTCAGGTTGTTGTCTTC+TGG + chr4_1:17177871-17177890 Msa0538100:intron 40.0%
AACTACTATTATCCCTCGAG+CGG + chr4_1:17177894-17177913 Msa0538100:CDS 40.0%
TAGAGATGAACTATGGGTCT+TGG - chr4_1:17177994-17178013 None:intergenic 40.0%
! CTTTTATGTGGATATCAGGG+TGG + chr4_1:17178064-17178083 Msa0538100:intron 40.0%
! ACTGTGGTGGAGATAACTTT+CGG + chr4_1:17178157-17178176 Msa0538100:CDS 40.0%
TGGAGATAACTTTCGGTGAT+CGG + chr4_1:17178164-17178183 Msa0538100:CDS 40.0%
CTTAGGCCTCAATGTTGTTA+AGG + chr4_1:17178309-17178328 Msa0538100:CDS 40.0%
ACCGAGTATCTCTTCAGTTT+AGG + chr4_1:17178518-17178537 Msa0538100:intron 40.0%
GCCTAAACTGAAGAGATACT+CGG - chr4_1:17178522-17178541 None:intergenic 40.0%
!!! ACAGGGCTTTTTAGAGTAGA+TGG - chr4_1:17178645-17178664 None:intergenic 40.0%
! CTACTCTAAAAAGCCCTGTT+TGG + chr4_1:17178646-17178665 Msa0538100:intron 40.0%
CGCATAAAGAAAGGCCTATT+TGG - chr4_1:17178907-17178926 None:intergenic 40.0%
!! TGAAACTTGTTGCGCAACTT+AGG + chr4_1:17179019-17179038 Msa0538100:intron 40.0%
TAGTAATTCCTTGGGTATGC+TGG + chr4_1:17179098-17179117 Msa0538100:intron 40.0%
!! ACTCTGGATCTTCCACTTTT+CGG - chr4_1:17179148-17179167 None:intergenic 40.0%
!! GATAGTTGGTAAAGCATACC+GGG - chr4_1:17179220-17179239 None:intergenic 40.0%
!! GGATAGTTGGTAAAGCATAC+CGG - chr4_1:17179221-17179240 None:intergenic 40.0%
CAATGAGAAAGGAGGATAGT+TGG - chr4_1:17179234-17179253 None:intergenic 40.0%
CAACTATCCTCCTTTCTCAT+TGG + chr4_1:17179232-17179251 Msa0538100:intron 40.0%
TATCCTCCTTTCTCATTGGA+GGG + chr4_1:17179236-17179255 Msa0538100:intron 40.0%
AAATCACCCTCCAATGAGAA+AGG - chr4_1:17179245-17179264 None:intergenic 40.0%
TTTCTCATTGGAGGGTGATT+TGG + chr4_1:17179244-17179263 Msa0538100:intron 40.0%
! AGATTCATCACCTGCTCTTT+TGG - chr4_1:17179385-17179404 None:intergenic 40.0%
ACAAGATCGACAAGTAATCC+AGG - chr4_1:17179974-17179993 None:intergenic 40.0%
ATCTGGAGAATTTGACACTG+AGG + chr4_1:17180027-17180046 Msa0538100:CDS 40.0%
! AAACCTTCTAAGTTCTGACG+TGG + chr4_1:17180093-17180112 Msa0538100:intron 40.0%
GCTCATAATCGCTGATAAGA+GGG + chr4_1:17180152-17180171 Msa0538100:intron 40.0%
GCGTGGCTTATTCATTTGTT+GGG + chr4_1:17180224-17180243 Msa0538100:intron 40.0%
TTACGGATAAGCTTGTGAAC+TGG + chr4_1:17180299-17180318 Msa0538100:intron 40.0%
ATTAAAGTTACCTGCTGCAG+GGG - chr4_1:17180587-17180606 None:intergenic 40.0%
GATTAAAGTTACCTGCTGCA+GGG - chr4_1:17180588-17180607 None:intergenic 40.0%
AGATTAAAGTTACCTGCTGC+AGG - chr4_1:17180589-17180608 None:intergenic 40.0%
GTACATTGAAGTAGGCAAGT+AGG + chr4_1:17180911-17180930 Msa0538100:intron 40.0%
! CTGAGGAATCCAGTTTTTGA+AGG + chr4_1:17181067-17181086 Msa0538100:CDS 40.0%
AAGAGATGCCCTTCAAAAAC+TGG - chr4_1:17181079-17181098 None:intergenic 40.0%
! TTTGGAGTATAACACCACCA+TGG + chr4_1:17181134-17181153 Msa0538100:three_prime_UTR 40.0%
AGTATAACACCACCATGGAT+TGG + chr4_1:17181139-17181158 Msa0538100:three_prime_UTR 40.0%
AAACATTCACCAATCCATGG+TGG - chr4_1:17181151-17181170 None:intergenic 40.0%
TGCAAACATTCACCAATCCA+TGG - chr4_1:17181154-17181173 None:intergenic 40.0%
GCATTCATTGTTTCATTGGG+AGG + chr4_1:17181171-17181190 Msa0538100:three_prime_UTR 40.0%
!! GAGGGCATGAATGAAAGTTT+TGG + chr4_1:17181400-17181419 Msa0538100:three_prime_UTR 40.0%
CTCCAGTTATTGAAAAGTGG+TGG - chr4_1:17181426-17181445 None:intergenic 40.0%
!! GCTTCATTAACTCTAGGACT+TGG - chr4_1:17181452-17181471 None:intergenic 40.0%
!! GCTATGAGTGCTTTGAGACT+TGG + chr4_1:17176765-17176784 Msa0538100:CDS 45.0%
AAGTCATATACCACTGGGTG+GGG - chr4_1:17177468-17177487 None:intergenic 45.0%
CAAGTCATATACCACTGGGT+GGG - chr4_1:17177469-17177488 None:intergenic 45.0%
ACAAGTCATATACCACTGGG+TGG - chr4_1:17177470-17177489 None:intergenic 45.0%
! TTTTCATGAAGAACGCCTGC+AGG + chr4_1:17177660-17177679 Msa0538100:intron 45.0%
AGTACCTGCACATCAGTAAC+AGG - chr4_1:17177925-17177944 None:intergenic 45.0%
GTTACTGATGTGCAGGTACT+CGG + chr4_1:17177925-17177944 Msa0538100:intron 45.0%
! TGTCGACCGTGTTTGTTGAT+CGG + chr4_1:17178021-17178040 Msa0538100:intron 45.0%
GGATATCAGGGTGGAAATCA+AGG + chr4_1:17178073-17178092 Msa0538100:intron 45.0%
TATGACTATTGGGGTCGGAA+CGG - chr4_1:17178110-17178129 None:intergenic 45.0%
TTGCATCTGGATCCAAGTCT+TGG - chr4_1:17178138-17178157 None:intergenic 45.0%
ATAACTTTCGGTGATCGGCT+TGG + chr4_1:17178169-17178188 Msa0538100:CDS 45.0%
TCTTCAGTTTAGGCCAGCAT+TGG + chr4_1:17178528-17178547 Msa0538100:intron 45.0%
TTTCAGTTGGGTTCCAATGC+TGG - chr4_1:17178544-17178563 None:intergenic 45.0%
AGCACAAGGAATGACTAGTG+CGG - chr4_1:17178606-17178625 None:intergenic 45.0%
! CAATTAGGAGCAAGAGCACA+AGG - chr4_1:17178620-17178639 None:intergenic 45.0%
!! GCTATTTTCATGAGCCATCG+TGG + chr4_1:17178789-17178808 Msa0538100:intron 45.0%
AGTCTGTTTCAGAGAGCCAA+TGG - chr4_1:17178844-17178863 None:intergenic 45.0%
TAATTCCTTGGGTATGCTGG+TGG + chr4_1:17179101-17179120 Msa0538100:intron 45.0%
! GGAGCTTTTTGCAGTGATAC+TGG + chr4_1:17179122-17179141 Msa0538100:intron 45.0%
GGAAGATCCAGAGTTGTTAG+AGG + chr4_1:17179154-17179173 Msa0538100:CDS 45.0%
CGAATTGCCTCTAACAACTC+TGG - chr4_1:17179164-17179183 None:intergenic 45.0%
CTATCCTCCTTTCTCATTGG+AGG + chr4_1:17179235-17179254 Msa0538100:intron 45.0%
GAGAAGTGAGAATTGCCTGT+TGG - chr4_1:17179282-17179301 None:intergenic 45.0%
! TTAGCAATGGGAGCAGCTTT+TGG + chr4_1:17179349-17179368 Msa0538100:CDS 45.0%
ACTTCTACCTCCAAAAGAGC+AGG + chr4_1:17179372-17179391 Msa0538100:CDS 45.0%
! TTCATCACCTGCTCTTTTGG+AGG - chr4_1:17179382-17179401 None:intergenic 45.0%
CGAATGCATTACCTTCGATC+TGG - chr4_1:17179773-17179792 None:intergenic 45.0%
TCTATGTGGAGACAGCTGAT+CGG + chr4_1:17179948-17179967 Msa0538100:CDS 45.0%
GGCTCATAATCGCTGATAAG+AGG + chr4_1:17180151-17180170 Msa0538100:intron 45.0%
!! TAATGAAAGCGCCTTCCGTT+TGG + chr4_1:17180201-17180220 Msa0538100:intron 45.0%
!! AATGAAAGCGCCTTCCGTTT+GGG + chr4_1:17180202-17180221 Msa0538100:intron 45.0%
ATGAATAAGCCACGCCCAAA+CGG - chr4_1:17180219-17180238 None:intergenic 45.0%
GGCGTGGCTTATTCATTTGT+TGG + chr4_1:17180223-17180242 Msa0538100:intron 45.0%
GGTTACAACTATGAGGGCTA+GGG + chr4_1:17180245-17180264 Msa0538100:intron 45.0%
GTTACAACTATGAGGGCTAG+GGG + chr4_1:17180246-17180265 Msa0538100:intron 45.0%
TTATCCGTAAACCGTAACGC+AGG - chr4_1:17180289-17180308 None:intergenic 45.0%
CACTAGATGCTTGCGCAATA+AGG - chr4_1:17180938-17180957 None:intergenic 45.0%
CTTATTGCGCAAGCATCTAG+TGG + chr4_1:17180936-17180955 Msa0538100:intron 45.0%
! GAGATATTTCTTGAGGCGTC+CGG + chr4_1:17181041-17181060 Msa0538100:CDS 45.0%
AAACTGGATTCCTCAGTTGC+CGG - chr4_1:17181063-17181082 None:intergenic 45.0%
!! GGCCACCACTTTTCAATAAC+TGG + chr4_1:17181421-17181440 Msa0538100:three_prime_UTR 45.0%
AGCACCTGTTACTGATGTGC+AGG + chr4_1:17177918-17177937 Msa0538100:CDS 50.0%
CTTGGATCCAGATGCAACTG+TGG + chr4_1:17178141-17178160 Msa0538100:CDS 50.0%
ATCTCCACCACAGTTGCATC+TGG - chr4_1:17178151-17178170 None:intergenic 50.0%
GCACAAGGAATGACTAGTGC+GGG - chr4_1:17178605-17178624 None:intergenic 50.0%
CAGTGATACTGGCCGAAAAG+TGG + chr4_1:17179133-17179152 Msa0538100:intron 50.0%
TCACCCTCCAATGAGAAAGG+AGG - chr4_1:17179242-17179261 None:intergenic 50.0%
CCTTCGATCTGGACCATCAT+CGG - chr4_1:17179762-17179781 None:intergenic 50.0%
TGGCCACGTCAGAACTTAGA+AGG - chr4_1:17180099-17180118 None:intergenic 50.0%
GGGTTACAACTATGAGGGCT+AGG + chr4_1:17180244-17180263 Msa0538100:intron 50.0%
TGTTTGAACCTAGGGGCTCT+TGG + chr4_1:17180514-17180533 Msa0538100:intron 50.0%
GTTGGCAAGAACCTGCAACA+TGG - chr4_1:17181016-17181035 None:intergenic 50.0%
CATATACCACTGGGTGGGGT+TGG - chr4_1:17177464-17177483 None:intergenic 55.0%
TGAAGAACGCCTGCAGGACA+CGG + chr4_1:17177666-17177685 Msa0538100:intron 55.0%
ACACCAAATCCGTGTCCTGC+AGG - chr4_1:17177678-17177697 None:intergenic 55.0%
GGATCCAGATGCAACTGTGG+TGG + chr4_1:17178144-17178163 Msa0538100:CDS 55.0%
AAGCTCCACCAGCATACCCA+AGG - chr4_1:17179109-17179128 None:intergenic 55.0%
! CCGATGATGGTCCAGATCGA+AGG + chr4_1:17179759-17179778 Msa0538100:CDS 55.0%
ATAAGCCACGCCCAAACGGA+AGG - chr4_1:17180215-17180234 None:intergenic 55.0%
AACTATGAGGGCTAGGGGTG+AGG + chr4_1:17180251-17180270 Msa0538100:intron 55.0%
ACTATGAGGGCTAGGGGTGA+GGG + chr4_1:17180252-17180271 Msa0538100:intron 55.0%
GCCACCTGCGTTACGGTTTA+CGG + chr4_1:17180282-17180301 Msa0538100:intron 55.0%
TCCGTAAACCGTAACGCAGG+TGG - chr4_1:17180286-17180305 None:intergenic 55.0%
TGCTTTAGCCAAGAGCCCCT+AGG - chr4_1:17180525-17180544 None:intergenic 55.0%
!! ACTGGGTGGGGTTGGCTACA+TGG - chr4_1:17177456-17177475 None:intergenic 60.0%
ATGTAGCCAACCCCACCCAG+TGG + chr4_1:17177455-17177474 Msa0538100:intron 60.0%
ACGCCTGCAGGACACGGATT+TGG + chr4_1:17177672-17177691 Msa0538100:intron 60.0%
! TAACAGGTGCTGCCGCTCGA+GGG - chr4_1:17177909-17177928 None:intergenic 60.0%
GAATGACTAGTGCGGGCCAG+TGG - chr4_1:17178598-17178617 None:intergenic 60.0%
CTATGAGGGCTAGGGGTGAG+GGG + chr4_1:17180253-17180272 Msa0538100:intron 60.0%
TATGAGGGCTAGGGGTGAGG+GGG + chr4_1:17180254-17180273 Msa0538100:intron 60.0%
AATCAGCAAGCCCCTGCAGC+AGG + chr4_1:17180574-17180593 Msa0538100:CDS 60.0%
! GTAACAGGTGCTGCCGCTCG+AGG - chr4_1:17177910-17177929 None:intergenic 65.0%
TGACTAGTGCGGGCCAGTGG+TGG - chr4_1:17178595-17178614 None:intergenic 65.0%
GTGGAGACAGCTGATCGGCC+TGG + chr4_1:17179953-17179972 Msa0538100:CDS 65.0%
AAGCGCCTTCCGTTTGGGCG+TGG + chr4_1:17180207-17180226 Msa0538100:intron 65.0%
ATGAGGGCTAGGGGTGAGGG+GGG + chr4_1:17180255-17180274 Msa0538100:intron 65.0%
GGGCTTCGCCACCTGCGTTA+CGG + chr4_1:17180275-17180294 Msa0538100:intron 65.0%
! CTTGAGGCGTCCGGCAACTG+AGG + chr4_1:17181050-17181069 Msa0538100:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 17176504 17181473 17176504 ID=Msa0538100;Name=Msa0538100
chr4_1 mRNA 17176504 17181473 17176504 ID=Msa0538100-mRNA-1;Parent=Msa0538100;Name=Msa0538100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=252|1|1|1|1|1|10|387|294
chr4_1 exon 17176504 17176919 17176504 ID=Msa0538100-mRNA-1:exon:5057;Parent=Msa0538100-mRNA-1
chr4_1 exon 17177879 17177939 17177879 ID=Msa0538100-mRNA-1:exon:5058;Parent=Msa0538100-mRNA-1
chr4_1 exon 17178082 17178207 17178082 ID=Msa0538100-mRNA-1:exon:5059;Parent=Msa0538100-mRNA-1
chr4_1 exon 17178292 17178386 17178292 ID=Msa0538100-mRNA-1:exon:5060;Parent=Msa0538100-mRNA-1
chr4_1 exon 17179136 17179220 17179136 ID=Msa0538100-mRNA-1:exon:5061;Parent=Msa0538100-mRNA-1
chr4_1 exon 17179334 17179393 17179334 ID=Msa0538100-mRNA-1:exon:5062;Parent=Msa0538100-mRNA-1
chr4_1 exon 17179725 17179780 17179725 ID=Msa0538100-mRNA-1:exon:5063;Parent=Msa0538100-mRNA-1
chr4_1 exon 17179943 17180048 17179943 ID=Msa0538100-mRNA-1:exon:5064;Parent=Msa0538100-mRNA-1
chr4_1 exon 17180527 17180595 17180527 ID=Msa0538100-mRNA-1:exon:5065;Parent=Msa0538100-mRNA-1
chr4_1 exon 17181024 17181473 17181024 ID=Msa0538100-mRNA-1:exon:5066;Parent=Msa0538100-mRNA-1
chr4_1 five_prime_UTR 17176504 17176755 17176504 ID=Msa0538100-mRNA-1:five_prime_utr;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17176756 17176919 17176756 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17177879 17177939 17177879 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17178082 17178207 17178082 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17178292 17178386 17178292 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17179136 17179220 17179136 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17179334 17179393 17179334 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17179725 17179780 17179725 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17179943 17180048 17179943 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17180527 17180595 17180527 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 CDS 17181024 17181086 17181024 ID=Msa0538100-mRNA-1:cds;Parent=Msa0538100-mRNA-1
chr4_1 three_prime_UTR 17181087 17181473 17181087 ID=Msa0538100-mRNA-1:three_prime_utr;Parent=Msa0538100-mRNA-1
Gene Sequence

>Msa0538100

ATGGCTATGGCTATGAGTGCTTTGAGACTTGGATTTCACTTCAGTGCTGCTACTGATAATAGTTTGAGAGTTTTGGAAAAACCCATTTTCTGTGTCCCTTTTTTGAATGCTTCTTGTTCTGGGTTTGTTTCTACTAAGCCATGTTACTTTCTTCACAAAAGAAGGTTGTTGTCTTCTGGAACTACTATTATCCCTCGAGCGGCAGCACCTGTTACTGATGTGCAGGGTGGAAATCAAGGTGAGACTGATACCGTTCCGACCCCAATAGTCATAATTGACCAAGACTTGGATCCAGATGCAACTGTGGTGGAGATAACTTTCGGTGATCGGCTTGGAGCTCTTCTTGACACAATGAGTGCATTAAAAGACTTAGGCCTCAATGTTGTTAAGGCAAATGTTTTTCTGGATTCTTCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCCGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTGATTCAGTATCACCCGGAATCAAGTTCTCAGTTAGCAATGGGAGCAGCTTTTGGACTTCTACCTCCAAAAGAGCAGGTTGATGTGGACATTGCAACTCACATAAACATATCCGATGATGGTCCAGATCGAAGTTTGTTCTATGTGGAGACAGCTGATCGGCCTGGATTACTTGTCGATCTTGTAAAAAGTATTACTGACATTGACATTGCTGTTGAATCTGGAGAATTTGACACTGAGGGGCTCTTGGCTAAAGCAAAGTTTCATGTTAGCTACAAAGGCAAAGCAATCAGCAAGCCCCTGCAGCAGGTTCTTGCCAACAGCTTGAGATATTTCTTGAGGCGTCCGGCAACTGAGGAATCCAGTTTTTGA

Protein sequence

>Msa0538100

MAMAMSALRLGFHFSAATDNSLRVLEKPIFCVPFLNASCSGFVSTKPCYFLHKRRLLSSGTTIIPRAAAPVTDVQGGNQGETDTVPTPIVIIDQDLDPDATVVEITFGDRLGALLDTMSALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQVDVDIATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAISKPLQQVLANSLRYFLRRPATEESSF*