AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0060720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060720 MtrunA17_Chr1g0160461 99.839 621 1 0 1 621 1 621 0.0 1275
Msa0060720 MtrunA17_Chr4g0044181 77.877 669 90 15 1 621 1 659 0.0 975
Msa0060720 MtrunA17_Chr6g0478431 63.281 640 180 13 1 621 1 604 0.0 759
Msa0060720 MtrunA17_Chr7g0255941 63.323 638 170 14 1 621 1 591 0.0 736
Msa0060720 MtrunA17_Chr4g0071571 58.779 655 206 12 1 621 1 625 0.0 713
Msa0060720 MtrunA17_Chr8g0393111 57.235 622 130 15 1 591 1 517 0.0 628
Msa0060720 MtrunA17_Chr1g0159341 47.943 632 213 19 1 621 1 527 2.13e-166 485
Msa0060720 MtrunA17_Chr4g0071551 74.178 213 54 1 1 212 1 213 7.42e-114 339
Msa0060720 MtrunA17_Chr2g0298971 49.402 251 102 5 1 248 1 229 4.77e-74 246
Msa0060720 MtrunA17_Chr2g0298971 39.271 247 101 5 401 600 273 517 3.57e-45 168
Msa0060720 MtrunA17_Chr4g0071561 72.727 154 42 0 444 597 163 316 2.95e-73 238
Msa0060720 MtrunA17_Chr7g0216571 67.089 158 52 0 464 621 210 367 2.32e-65 219
Msa0060720 MtrunA17_Chr7g0216571 55.696 158 70 0 1 158 12 169 2.10e-52 184
Msa0060720 MtrunA17_Chr6g0452821 63.190 163 58 1 461 621 198 360 7.52e-63 212
Msa0060720 MtrunA17_Chr6g0452821 56.329 158 68 1 1 157 1 158 6.40e-51 180
Msa0060720 MtrunA17_Chr7g0249141 53.289 152 71 0 468 619 208 359 1.09e-51 182
Msa0060720 MtrunA17_Chr7g0249141 51.613 155 75 0 1 155 1 155 3.29e-47 170
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0060720 AT1G70940.1 74.923 646 131 13 1 621 1 640 0.0 908
Msa0060720 AT2G01420.1 74.725 637 120 14 1 621 1 612 0.0 900
Msa0060720 AT2G01420.2 74.411 637 126 13 1 621 1 616 0.0 892
Msa0060720 AT1G23080.1 73.585 636 136 12 1 621 1 619 0.0 891
Msa0060720 AT1G23080.3 72.956 636 136 11 1 621 1 615 0.0 884
Msa0060720 AT1G23080.4 72.956 636 136 11 1 621 1 615 0.0 884
Msa0060720 AT1G23080.2 70.391 537 123 11 1 522 1 516 0.0 722
Msa0060720 AT5G57090.1 58.471 667 211 11 1 621 1 647 0.0 720
Msa0060720 AT2G01420.3 72.305 538 112 13 1 522 1 517 0.0 719
Msa0060720 AT1G73590.1 59.538 650 206 12 1 621 1 622 0.0 706
Msa0060720 AT5G57090.2 55.556 567 186 11 101 621 1 547 0.0 555
Msa0060720 AT1G77110.1 48.413 630 256 15 1 621 1 570 2.99e-180 523
Msa0060720 AT1G77110.2 47.697 608 249 15 1 599 1 548 1.06e-167 489
Msa0060720 AT5G15100.1 62.805 164 61 0 458 621 204 367 8.27e-61 207
Msa0060720 AT5G15100.1 49.153 177 80 2 1 172 1 172 1.05e-44 163
Msa0060720 AT5G16530.1 54.000 150 69 0 467 616 195 344 7.25e-51 179
Msa0060720 AT5G16530.1 52.229 157 75 0 1 157 1 157 1.06e-49 176
Msa0060720 AT5G16530.2 52.229 157 75 0 1 157 1 157 3.20e-50 177
Msa0060720 AT5G16530.2 51.825 137 66 0 464 600 192 328 3.17e-43 158

Find 224 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCAAGACATTCCAATTT+TGG 0.071341 1_2:-18536682 Msa0060720:CDS
GGCTTCCATTGTTTCCTTTA+AGG 0.137518 1_2:-18536938 Msa0060720:CDS
ATCTTTAAGTGTTATCATTT+TGG 0.154954 1_2:+18537449 None:intergenic
ACAATGGAAGCCGCGGTTTC+TGG 0.173798 1_2:+18536949 None:intergenic
TAATTGAAAATGAAGGAAAA+TGG 0.174220 1_2:+18537545 None:intergenic
ACTCATTCTGTGCAAAATTT+TGG 0.176459 1_2:+18537624 None:intergenic
TTGAATTGCAGGGTTATATT+TGG 0.190580 1_2:-18533325 Msa0060720:intron
ATTATATTTAGGTCTGTTTA+TGG 0.191838 1_2:-18534282 Msa0060720:intron
CAAGTCTCATTGGTCTTATT+TGG 0.200411 1_2:-18535596 Msa0060720:CDS
ATTGCCTATACCTTTGTTAT+TGG 0.219936 1_2:+18536264 None:intergenic
CCGCGACTCCGGTGGCTTTA+GGG 0.226606 1_2:+18535718 None:intergenic
TCCGCGACTCCGGTGGCTTT+AGG 0.232306 1_2:+18535717 None:intergenic
CTTCGGATTGTTCCGAATTT+CGG 0.239748 1_2:+18536344 None:intergenic
AATCTGAAGTTCATTTGATA+TGG 0.240310 1_2:+18537255 None:intergenic
CATGATAATAATAGGTAAAA+AGG 0.253119 1_2:+18532795 None:intergenic
TGCTAGTAGCACTTTCATTA+TGG 0.257436 1_2:-18537200 Msa0060720:CDS
TCATCTTGGAATTTCTAATA+TGG 0.257757 1_2:+18533021 None:intergenic
CTCAAGTGCTTCACCGGTTT+CGG 0.261627 1_2:-18536389 Msa0060720:CDS
CAAATCATTAGCCCCAAAAT+TGG 0.264008 1_2:+18536669 None:intergenic
CCTTCAAATTTCGAAGAAAA+TGG 0.266779 1_2:-18536607 Msa0060720:CDS
CTTCCTAACACTTTGGTTAT+GGG 0.267472 1_2:-18537117 Msa0060720:CDS
ACTTCCTAACACTTTGGTTA+TGG 0.272014 1_2:-18537118 Msa0060720:CDS
AACATCCGAATCGACCTTAA+AGG 0.272674 1_2:+18536924 None:intergenic
ATGTAGTAGAGTAGAGTAAT+TGG 0.282953 1_2:+18533286 None:intergenic
GACACGTCTCATACTCATTA+TGG 0.285664 1_2:-18535655 Msa0060720:CDS
ACAATAATCATGATAATAAT+AGG 0.297965 1_2:+18532787 None:intergenic
ATATGGAGACATTAGCATTA+TGG 0.309373 1_2:+18533038 None:intergenic
TTAGTAGTAGAGGAGAATTC+CGG 0.312645 1_2:+18536514 None:intergenic
TGATTATTCAGGTAGCTTAA+TGG 0.316996 1_2:-18537067 Msa0060720:CDS
TTTGGTCCCTTGTTGCCTTT+AGG 0.319465 1_2:-18535578 Msa0060720:intron
GCTATGTATGGTGATTATTC+AGG 0.323216 1_2:-18537078 Msa0060720:CDS
CCTTACTGGTCCAGCAGTTA+TGG 0.341147 1_2:-18534195 Msa0060720:CDS
GAATTCGAGCCCAACTTGTT+AGG 0.341677 1_2:+18535756 None:intergenic
TTGAATAGGTGTTTGGATTA+CGG 0.349635 1_2:+18535616 None:intergenic
TTCTCACCGGATCAATGTTC+CGG 0.355844 1_2:-18537345 Msa0060720:CDS
TCGGATGTTATGTCGTTAGA+TGG 0.360086 1_2:-18536910 Msa0060720:CDS
AAGATCATAGCAACATATAA+TGG 0.361273 1_2:+18537399 None:intergenic
TATGGAGACATTAGCATTAT+GGG 0.368773 1_2:+18533039 None:intergenic
TTATGTAGAGGAAAAGAAAT+TGG 0.368887 1_2:-18532832 Msa0060720:three_prime_UTR
ATTCCCACATGCAATGATCT+TGG 0.369808 1_2:+18534250 None:intergenic
ATGAGACTTGAATAGGTGTT+TGG 0.370771 1_2:+18535609 None:intergenic
AGAGAGCATGTAACATTGTA+AGG 0.373238 1_2:-18532976 Msa0060720:three_prime_UTR
CCTCAATGTCTTCCGAAATT+CGG 0.379629 1_2:-18536356 Msa0060720:CDS
GGAAGTTACATGTTACTGTT+AGG 0.381177 1_2:-18536846 Msa0060720:CDS
AGTTAGTTAACTAGGAGTAT+AGG 0.384939 1_2:+18537586 None:intergenic
TTTGGCACCGGATACGAATT+AGG 0.387532 1_2:+18536538 None:intergenic
TATACAAATGGTTGATAGAA+AGG 0.388340 1_2:+18532885 None:intergenic
GGTGGTCAAGAAAAGGAAAT+TGG 0.389811 1_2:-18535843 Msa0060720:CDS
GCTGATGAACATAATCAAAA+TGG 0.390186 1_2:-18536292 Msa0060720:CDS
CTATCTTCCAAAGTATGAAT+AGG 0.391219 1_2:+18533242 None:intergenic
TTCATATAAAATTATACAAA+TGG 0.391462 1_2:+18532873 None:intergenic
CCTTGAAAATTACATCATCT+TGG 0.393042 1_2:+18533007 None:intergenic
ATACTGTCTGATGCTGGTCT+TGG 0.394410 1_2:-18535326 Msa0060720:CDS
AATTGAAAATGAAGGAAAAT+GGG 0.395968 1_2:+18537546 None:intergenic
GCCCAACTTGTTAGGTCCAT+TGG 0.399378 1_2:+18535764 None:intergenic
GGTGCAAGTTCTCCTAGATT+CGG 0.403944 1_2:-18536586 Msa0060720:CDS
CCTACATGTAGCTATTGTTC+AGG 0.405283 1_2:-18534135 Msa0060720:intron
GTCTCATACTCATTATGGTT+TGG 0.406117 1_2:-18535650 Msa0060720:CDS
ATTCCCATAACCAAAGTGTT+AGG 0.414160 1_2:+18537114 None:intergenic
TGGTTCTTCAGTGTATCATT+TGG 0.415072 1_2:-18537035 Msa0060720:CDS
AAGACCAGCATCAGACAGTA+TGG 0.415534 1_2:+18535328 None:intergenic
ATGGCTATAAGATTCCTTAC+TGG 0.418097 1_2:-18534209 Msa0060720:CDS
CTACTCTACTACATTCTCCT+TGG 0.419596 1_2:-18533277 Msa0060720:CDS
GTAGAGGAGAATTCCGGGTT+TGG 0.423859 1_2:+18536520 None:intergenic
AGGCCAGCACTTTCCGAAAC+CGG 0.423867 1_2:+18536376 None:intergenic
TGTTTCCTTTAAGGTCGATT+CGG 0.427917 1_2:-18536929 Msa0060720:CDS
GGTTGAAATTAGACCCTCTT+GGG 0.428239 1_2:+18536734 None:intergenic
GCCGGATAAAACCCGAATCT+AGG 0.429616 1_2:+18536574 None:intergenic
TAGTAGTAGAGGAGAATTCC+GGG 0.437495 1_2:+18536515 None:intergenic
GTGCAAGTTCTCCTAGATTC+GGG 0.439036 1_2:-18536585 Msa0060720:CDS
TTCTGTTGCTTCATTTGCCA+TGG 0.440626 1_2:-18534228 Msa0060720:CDS
GCCCCAAAATTGGAATGTCT+TGG 0.443621 1_2:+18536679 None:intergenic
TTCCCACATGCAATGATCTT+GGG 0.445777 1_2:+18534251 None:intergenic
ATTGCAGACAAAAGGTTCTC+AGG 0.450066 1_2:-18536440 Msa0060720:CDS
AGTCAAATTATATCTAGAAA+TGG 0.450786 1_2:-18532911 Msa0060720:three_prime_UTR
TTAGGCACAGTTTGCGCTGC+CGG 0.451420 1_2:+18536556 None:intergenic
TCTTCGAAATTTGAAGGTCT+AGG 0.454518 1_2:+18536613 None:intergenic
AAGGAAAATGGGAAAGAAAA+CGG 0.454640 1_2:+18537557 None:intergenic
CCTTTGTTAATTGCTATGTA+TGG 0.454996 1_2:-18537090 Msa0060720:CDS
AAGACCAATGAGACTTGAAT+AGG 0.456356 1_2:+18535602 None:intergenic
AACACCTATTCAAGTCTCAT+TGG 0.456598 1_2:-18535606 Msa0060720:CDS
AGGGTCTAATTTCAACCATC+AGG 0.456670 1_2:-18536728 Msa0060720:CDS
AAGGTGTGTCAGAGAAAGTA+GGG 0.458240 1_2:+18537721 None:intergenic
CCCAACTTGTTAGGTCCATT+GGG 0.459861 1_2:+18535765 None:intergenic
AAATTTATAATTGAAAATGA+AGG 0.461152 1_2:+18537538 None:intergenic
CAGGTTCAATTGCAGACAAA+AGG 0.466019 1_2:-18536448 Msa0060720:CDS
GAAGGTGTGTCAGAGAAAGT+AGG 0.466090 1_2:+18537720 None:intergenic
AAGAGGACTTCAAGTTCAAT+GGG 0.468366 1_2:-18535815 Msa0060720:CDS
TCACCGGTTTCGGAAAGTGC+TGG 0.470039 1_2:-18536379 Msa0060720:CDS
CCTACGGTTCGGTCCGTTGG+TGG 0.474399 1_2:-18537374 Msa0060720:CDS
ATCAACACTTCCTAACACTT+TGG 0.475928 1_2:-18537124 Msa0060720:CDS
TGCTTACGCTGTACTAAGAA+TGG 0.477801 1_2:+18533446 None:intergenic
CTTCACAGGTTTAGTAGTAG+AGG 0.477907 1_2:+18536504 None:intergenic
GGAATGGCTATGTTTAGCTT+AGG 0.479154 1_2:-18535305 Msa0060720:intron
TTCGTATCCGGTGCCAAACC+CGG 0.479487 1_2:-18536533 Msa0060720:CDS
TAGCCTACGGTTCGGTCCGT+TGG 0.480227 1_2:-18537377 Msa0060720:CDS
GATCTCCTTAGCACCCTCTT+CGG 0.482409 1_2:+18536327 None:intergenic
TAGCTTAATGGTTCAAGTTG+TGG 0.483646 1_2:-18537055 Msa0060720:CDS
AAAGGAAATTGGTGGGGAAG+AGG 0.484370 1_2:-18535832 Msa0060720:CDS
GTTCATTTGATATGGATTGT+TGG 0.488470 1_2:+18537263 None:intergenic
AACTGTGCCTAATTCGTATC+CGG 0.489229 1_2:-18536545 Msa0060720:CDS
CCGAATTTCGGAAGACATTG+AGG 0.489492 1_2:+18536356 None:intergenic
GGTTGGTTAGTTAGTTAACT+AGG 0.491382 1_2:+18537578 None:intergenic
AATTGAAGGTGGTCAAGAAA+AGG 0.491402 1_2:-18535850 Msa0060720:intron
CCCAATGGACCTAACAAGTT+GGG 0.493053 1_2:-18535765 Msa0060720:CDS
AAGAGGGTGCTAAGGAGATC+AGG 0.493248 1_2:-18536324 Msa0060720:CDS
GTGGAGCTCAAGTGCTTCAC+CGG 0.493646 1_2:-18536395 Msa0060720:CDS
GAAGAGGACTTCAAGTTCAA+TGG 0.495292 1_2:-18535816 Msa0060720:CDS
GATGCATCAGTTGGTGATGA+TGG 0.503763 1_2:-18536868 Msa0060720:CDS
GTTGAATGGCATGTGAAGAA+AGG 0.505360 1_2:+18537503 None:intergenic
AGGAGTACTTGTAATAGTAC+TGG 0.508743 1_2:+18537659 None:intergenic
CTTGAAACTGATGCATCAGT+TGG 0.511837 1_2:-18536877 Msa0060720:CDS
TCAGCTCCAGTCAAATTTGA+CGG 0.512431 1_2:+18536778 None:intergenic
AAATTTGAAGGTCTAGGAGT+TGG 0.515304 1_2:+18536619 None:intergenic
TACGCTGTACTAAGAATGGC+TGG 0.515311 1_2:+18533450 None:intergenic
ATACAAATGGTTGATAGAAA+GGG 0.515594 1_2:+18532886 None:intergenic
GAAGCTGCTGCCATAACTGC+TGG 0.516874 1_2:+18534185 None:intergenic
CGCGACGAAGCGGTTTATAC+CGG 0.520411 1_2:+18537326 None:intergenic
TCATACTCATTATGGTTTGG+AGG 0.520930 1_2:-18535647 Msa0060720:CDS
GAGAATTCCGGGTTTGGCAC+CGG 0.521354 1_2:+18536526 None:intergenic
CTTGGAATGACAATTTCTGT+TGG 0.522627 1_2:+18533117 None:intergenic
TGGTTGAAATTAGACCCTCT+TGG 0.523061 1_2:+18536733 None:intergenic
CCCTAAAGCCACCGGAGTCG+CGG 0.523391 1_2:-18535718 Msa0060720:CDS
CCGCGACCGTCAAATTTGAC+TGG 0.525623 1_2:-18536784 Msa0060720:CDS
TCTGTCCAGTCTTCTTCTAG+AGG 0.530364 1_2:-18536643 Msa0060720:CDS
TCTATCGCCGTTGGCCTCCG+TGG 0.532052 1_2:-18534164 Msa0060720:CDS
GTCTGATGCTGGTCTTGGAA+TGG 0.532632 1_2:-18535321 Msa0060720:CDS
TTGGTCCTCTAGAAGAAGAC+TGG 0.534857 1_2:+18536638 None:intergenic
ATTTGTAATTGTAGAGTACA+AGG 0.536418 1_2:+18537773 None:intergenic
AGTAGAGTAGAGTAATTGGA+AGG 0.536719 1_2:+18533290 None:intergenic
ATTTCCATACTGTCTGATGC+TGG 0.538744 1_2:-18535332 Msa0060720:CDS
CTATCGCCGTTGGCCTCCGT+GGG 0.540857 1_2:-18534163 Msa0060720:CDS
ACCCAATGGACCTAACAAGT+TGG 0.543856 1_2:-18535766 Msa0060720:CDS
CCATAACTGCTGGACCAGTA+AGG 0.545402 1_2:+18534195 None:intergenic
GACACTTGAATCCGCGACTC+CGG 0.551443 1_2:+18535707 None:intergenic
TCTTGGTTGATAACCCATCA+TGG 0.553358 1_2:+18536696 None:intergenic
ATGTTACATGCTCTCTCTTG+AGG 0.554694 1_2:+18532983 None:intergenic
GTGGCTTTAGGGTGGAGCTC+CGG 0.554827 1_2:+18535729 None:intergenic
GCAGCAGCTTCTATCGCCGT+TGG 0.558133 1_2:-18534173 Msa0060720:CDS
TTTGATGCCGCAACAACCGC+AGG 0.558725 1_2:-18536467 Msa0060720:CDS
TTTATACCGGAACATTGATC+CGG 0.563596 1_2:+18537339 None:intergenic
GATTGTTGGTTGAGATGAAG+TGG 0.564135 1_2:+18537277 None:intergenic
TATGATCTTAGCCTACGGTT+CGG 0.565033 1_2:-18537385 Msa0060720:CDS
TGTCGGAAAACTCATGCCTC+CGG 0.565467 1_2:-18535688 Msa0060720:CDS
CCAGTCAAATTTGACGGTCG+CGG 0.567450 1_2:+18536784 None:intergenic
GTCAAGAAAAGGAAATTGGT+GGG 0.568661 1_2:-18535839 Msa0060720:CDS
AAAATGGGAAAGAAAACGGT+TGG 0.570567 1_2:+18537561 None:intergenic
CTTCAAGTTCAATGGGGTGA+AGG 0.574592 1_2:-18535808 Msa0060720:CDS
GAGGGTCCCACGGAGGCCAA+CGG 0.576668 1_2:+18534157 None:intergenic
AATTCGGAACAATCCGAAGA+GGG 0.578362 1_2:-18536340 Msa0060720:CDS
GAGCTCCACCCTAAAGCCAC+CGG 0.581241 1_2:-18535726 Msa0060720:CDS
GAGAGCATGTAACATTGTAA+GGG 0.581953 1_2:-18532975 Msa0060720:three_prime_UTR
GAAATTAGACCCTCTTGGGG+TGG 0.582116 1_2:+18536738 None:intergenic
CAATAGGCTGCACTTCCACA+AGG 0.583775 1_2:-18533513 Msa0060720:intron
GAACAATAGCTACATGTAGG+AGG 0.585385 1_2:+18534138 None:intergenic
ACTTGAATCCGCGACTCCGG+TGG 0.585921 1_2:+18535710 None:intergenic
AGTTAACTAGGAGTATAGGA+AGG 0.586720 1_2:+18537590 None:intergenic
GTGGAATGAAAGGAGAGGTA+CGG 0.587057 1_2:+18537296 None:intergenic
AAGTTCAATGGGGTGAAGGT+AGG 0.588094 1_2:-18535804 Msa0060720:CDS
GAACAAGGAGAAGGACCCAA+TGG 0.588943 1_2:-18535780 Msa0060720:CDS
CTGTACTAAGAATGGCTGGA+TGG 0.589732 1_2:+18533454 None:intergenic
AGTAAGGAATCTTATAGCCA+TGG 0.592444 1_2:+18534211 None:intergenic
GGGGTGAAGGTAGGAGAACA+AGG 0.592671 1_2:-18535795 Msa0060720:CDS
ATCGACCTTAAAGGAAACAA+TGG 0.593244 1_2:+18536933 None:intergenic
ACAATCCGAAGAGGGTGCTA+AGG 0.593701 1_2:-18536332 Msa0060720:CDS
GTAGAGTAGAGTAATTGGAA+GGG 0.595548 1_2:+18533291 None:intergenic
TTACACTGTCTTAACAGCAG+TGG 0.596282 1_2:-18537424 Msa0060720:CDS
TTGAGATGAAGTGGAATGAA+AGG 0.597744 1_2:+18537286 None:intergenic
ATGCATCAGTTGGTGATGAT+GGG 0.598176 1_2:-18536867 Msa0060720:CDS
TCATGGAGTAAAACTCCTGA+TGG 0.598436 1_2:+18536713 None:intergenic
GTTGCTATGATCTTAGCCTA+CGG 0.598914 1_2:-18537390 Msa0060720:CDS
AATTGAACCTGCGGTTGTTG+CGG 0.599082 1_2:+18536460 None:intergenic
AGACGTGTCATGACGCTCGC+CGG 0.600055 1_2:+18535669 None:intergenic
AGACATAAAAGAGGAAAACA+TGG 0.600168 1_2:-18532952 Msa0060720:three_prime_UTR
CAACCCAAGATCATTGCATG+TGG 0.601268 1_2:-18534254 Msa0060720:CDS
TTGAGGAAGTAATTATGTAG+AGG 0.602465 1_2:-18532844 Msa0060720:three_prime_UTR
CCTGAACAATAGCTACATGT+AGG 0.602969 1_2:+18534135 None:intergenic
CGACTCCGGTGGCTTTAGGG+TGG 0.603330 1_2:+18535721 None:intergenic
GTATAGAAACTAGAAAGAGA+AGG 0.606056 1_2:+18537702 None:intergenic
AAGGTAGGAGAACAAGGAGA+AGG 0.608019 1_2:-18535789 Msa0060720:CDS
GGTCAAGAAAAGGAAATTGG+TGG 0.613131 1_2:-18535840 Msa0060720:CDS
ATACCTACCTAAAGGCAACA+AGG 0.617062 1_2:+18535571 None:intergenic
AACAATAGCTACATGTAGGA+GGG 0.617085 1_2:+18534139 None:intergenic
GGAGTCGCGGATTCAAGTGT+CGG 0.620160 1_2:-18535705 Msa0060720:CDS
TACCTACCTAAAGGCAACAA+GGG 0.621757 1_2:+18535572 None:intergenic
CGGTATAAACCGCTTCGTCG+CGG 0.622533 1_2:-18537325 Msa0060720:CDS
TGGAAGATAGTAAACATGCA+TGG 0.626487 1_2:-18533229 Msa0060720:three_prime_UTR
CCACCAACGGACCGAACCGT+AGG 0.627762 1_2:+18537374 None:intergenic
AATGGTGAAACCAATAACAA+AGG 0.629421 1_2:-18536274 Msa0060720:intron
AAAGGAAACAATGGAAGCCG+CGG 0.630714 1_2:+18536942 None:intergenic
GAAGTATTCTATTCTTCACA+AGG 0.632098 1_2:-18533195 Msa0060720:three_prime_UTR
ATGAAGTGGAATGAAAGGAG+AGG 0.632775 1_2:+18537291 None:intergenic
TTTGTCTGCAATTGAACCTG+CGG 0.633224 1_2:+18536451 None:intergenic
AAGAGTTGCATATGTTTGTG+TGG 0.633927 1_2:-18536414 Msa0060720:CDS
CGGCGAAAACCGCGACGAAG+CGG 0.635295 1_2:+18537316 None:intergenic
GGTTTGTGAGACTAAGATGA+GGG 0.635837 1_2:+18537680 None:intergenic
GTCTCAGCTCCACCCCAAGA+GGG 0.636397 1_2:-18536747 Msa0060720:CDS
TGCTAAGGAGATCAGGATGG+TGG 0.637132 1_2:-18536317 Msa0060720:CDS
CGTGTCATGACGCTCGCCGG+AGG 0.639607 1_2:+18535672 None:intergenic
TTGTAAGGGAGACATAAAAG+AGG 0.640038 1_2:-18532961 Msa0060720:three_prime_UTR
TAAGGAGATCAGGATGGTGG+TGG 0.640923 1_2:-18536314 Msa0060720:CDS
GTGAGAAAATCTTCCACCAA+CGG 0.645716 1_2:+18537361 None:intergenic
AAAAGAGGAAAACATGGGAA+CGG 0.649795 1_2:-18532946 Msa0060720:three_prime_UTR
GACATAAAAGAGGAAAACAT+GGG 0.651787 1_2:-18532951 Msa0060720:three_prime_UTR
GTTGAAATTAGACCCTCTTG+GGG 0.655412 1_2:+18536735 None:intergenic
AACCCAAGATCATTGCATGT+GGG 0.657323 1_2:-18534253 Msa0060720:CDS
TCAAGAAAAGGAAATTGGTG+GGG 0.659437 1_2:-18535838 Msa0060720:CDS
AGTCTCAGCTCCACCCCAAG+AGG 0.662338 1_2:-18536748 Msa0060720:CDS
TTAGGAAGTCTAACGCGTCG+CGG 0.669107 1_2:-18536828 Msa0060720:CDS
TGGTTTGTGAGACTAAGATG+AGG 0.671362 1_2:+18537679 None:intergenic
GGGTGCTAAGGAGATCAGGA+TGG 0.673250 1_2:-18536320 Msa0060720:CDS
AAATTCGGAACAATCCGAAG+AGG 0.673663 1_2:-18536341 Msa0060720:CDS
CTACATGTAGGAGGGTCCCA+CGG 0.676202 1_2:+18534147 None:intergenic
ACAAATGGAACAATCCCTTG+TGG 0.676637 1_2:+18533498 None:intergenic
GGAGCAGTTTCCAGAAACCG+CGG 0.676934 1_2:-18536959 Msa0060720:CDS
TGATTAAAAGCTTAGCACCA+CGG 0.678635 1_2:+18536983 None:intergenic
CCATACATAGCAATTAACAA+AGG 0.679313 1_2:+18537090 None:intergenic
AGGTGTGTCAGAGAAAGTAG+GGG 0.684117 1_2:+18537722 None:intergenic
GGAAGTCTAACGCGTCGCGG+AGG 0.686204 1_2:-18536825 Msa0060720:CDS
GGTGTGTCAGAGAAAGTAGG+GGG 0.690706 1_2:+18537723 None:intergenic
AATAGGCTGCACTTCCACAA+GGG 0.700469 1_2:-18533512 Msa0060720:intron
GTTGGGCTCGAATTCAACGC+CGG 0.711535 1_2:-18535748 Msa0060720:CDS
CATGTAGGAGGGTCCCACGG+AGG 0.715446 1_2:+18534150 None:intergenic
AGAGGACTTCAAGTTCAATG+GGG 0.771569 1_2:-18535814 Msa0060720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATAATTGAAAATGA+AGG + chr1_2:18532975-18532994 None:intergenic 10.0%
!! TAATTTAATTCTAATATAGT+TGG - chr1_2:18534426-18534445 Msa0060720:intron 10.0%
!! ATAAAAAATTAAAAGAAGTT+TGG - chr1_2:18535008-18535027 Msa0060720:intron 10.0%
!!! ATGTTGATAATTATAAAAAA+AGG - chr1_2:18535335-18535354 Msa0060720:CDS 10.0%
!! ATAAAAGAAAATTAGTATAT+AGG + chr1_2:18535682-18535701 None:intergenic 10.0%
!! CATATTTGTTTATTATATTT+AGG - chr1_2:18536217-18536236 Msa0060720:intron 10.0%
!!! TTTATTTTTTTTATTTGAGA+AGG - chr1_2:18537347-18537366 Msa0060720:CDS 10.0%
!! TTCATATAAAATTATACAAA+TGG + chr1_2:18537640-18537659 None:intergenic 10.0%
!!! GTATAATTTTATATGAAAAT+CGG - chr1_2:18537643-18537662 Msa0060720:five_prime_UTR 10.0%
!! TTGTTAGATTAATTTAACAA+CGG + chr1_2:18534376-18534395 None:intergenic 15.0%
!! TTGTTAAATTAATCTAACAA+CGG - chr1_2:18534376-18534395 Msa0060720:intron 15.0%
!!! ATTGATTTCTCTATTATTTT+AGG + chr1_2:18535160-18535179 None:intergenic 15.0%
!!! TTGATAATTATAAAAAAAGG+TGG - chr1_2:18535338-18535357 Msa0060720:CDS 15.0%
!! AAAATCTTTGTTAATTAAAG+TGG - chr1_2:18535832-18535851 Msa0060720:CDS 15.0%
!! TTAGAAATATATCAACAAAA+GGG + chr1_2:18536076-18536095 None:intergenic 15.0%
!! TTTAGAAATATATCAACAAA+AGG + chr1_2:18536077-18536096 None:intergenic 15.0%
!! ATTCATTTGTCTTAAATTAT+TGG + chr1_2:18536104-18536123 None:intergenic 15.0%
!! ATGTGATTGAAAAATAAATA+AGG + chr1_2:18537099-18537118 None:intergenic 15.0%
!!! TTTTTTATAAATTGAATTGC+AGG - chr1_2:18537174-18537193 Msa0060720:CDS 15.0%
!!! TTTTTATAAATTGAATTGCA+GGG - chr1_2:18537175-18537194 Msa0060720:CDS 15.0%
!! ACAATAATCATGATAATAAT+AGG + chr1_2:18537726-18537745 None:intergenic 15.0%
!! AATTGAAAATGAAGGAAAAT+GGG + chr1_2:18532967-18532986 None:intergenic 20.0%
!! TAATTGAAAATGAAGGAAAA+TGG + chr1_2:18532968-18532987 None:intergenic 20.0%
!!! ATCATTTTGGATTTTTTTGT+TGG + chr1_2:18533051-18533070 None:intergenic 20.0%
!!! ATCTTTAAGTGTTATCATTT+TGG + chr1_2:18533064-18533083 None:intergenic 20.0%
!! GTAATGATAAGTTTCTAATT+TGG - chr1_2:18534634-18534653 Msa0060720:intron 20.0%
!! TTCTAATTTGGTTAAATTGA+AGG - chr1_2:18534646-18534665 Msa0060720:intron 20.0%
!! AGTTATGTAACTATTATTGT+TGG - chr1_2:18535103-18535122 Msa0060720:intron 20.0%
!!! TTTTTTAAATATCGGAAAAG+TGG - chr1_2:18535808-18535827 Msa0060720:CDS 20.0%
!! TTGTTAATTAAAGTGGTTAA+TGG - chr1_2:18535839-18535858 Msa0060720:CDS 20.0%
!!! AATAAGTTTTATAACACTTG+AGG + chr1_2:18535946-18535965 None:intergenic 20.0%
!! AAAGAAGAATAAACAAAATG+AGG + chr1_2:18536167-18536186 None:intergenic 20.0%
!!! TGTTTATTCTTCTTTTTCTA+AGG - chr1_2:18536172-18536191 Msa0060720:intron 20.0%
!! ATTATATTTAGGTCTGTTTA+TGG - chr1_2:18536228-18536247 Msa0060720:intron 20.0%
!! TGAATCCTAAGTAAATTTAA+TGG - chr1_2:18536763-18536782 Msa0060720:CDS 20.0%
!! GTATTCCATTAAATTTACTT+AGG + chr1_2:18536771-18536790 None:intergenic 20.0%
!!! ATATTATCATGTTTTGTGAT+AGG + chr1_2:18536926-18536945 None:intergenic 20.0%
!! ACAAAACATGATAATATTGA+AGG - chr1_2:18536929-18536948 Msa0060720:CDS 20.0%
!! ATTATGAGATTGTTAACTTA+TGG - chr1_2:18536955-18536974 Msa0060720:CDS 20.0%
!! AGTCAAATTATATCTAGAAA+TGG - chr1_2:18537599-18537618 Msa0060720:five_prime_UTR 20.0%
!! CATGATAATAATAGGTAAAA+AGG + chr1_2:18537718-18537737 None:intergenic 20.0%
! ATTTGTAATTGTAGAGTACA+AGG + chr1_2:18532740-18532759 None:intergenic 25.0%
!!! TTTTAGTGAAGTTTGTTGAA+TGG + chr1_2:18533024-18533043 None:intergenic 25.0%
! AAGATCATAGCAACATATAA+TGG + chr1_2:18533114-18533133 None:intergenic 25.0%
!! AATCTGAAGTTCATTTGATA+TGG + chr1_2:18533258-18533277 None:intergenic 25.0%
! CTAAAAATGGCAATTTAGAA+TGG - chr1_2:18533343-18533362 Msa0060720:intron 25.0%
!! TTTTAAATTGCACCTACAAT+CGG - chr1_2:18534302-18534321 Msa0060720:intron 25.0%
! CGGGTTAATTATAGTTATAA+CGG - chr1_2:18534322-18534341 Msa0060720:intron 25.0%
! AATCAATGACTAATCATTGT+TGG + chr1_2:18534526-18534545 None:intergenic 25.0%
! TAATTTGGTTAAATTGAAGG+TGG - chr1_2:18534649-18534668 Msa0060720:intron 25.0%
! ACTTTATAATACCTACCTAA+AGG + chr1_2:18534950-18534969 None:intergenic 25.0%
! AAGAATTATTGAGGAGAAAT+TGG + chr1_2:18535255-18535274 None:intergenic 25.0%
! ATGTGATAGAAGAATTATTG+AGG + chr1_2:18535264-18535283 None:intergenic 25.0%
! TGGTAGTAAAGTAAAATGAA+TGG - chr1_2:18535358-18535377 Msa0060720:CDS 25.0%
!! ATGATTGAATTTGAGAGTAT+GGG - chr1_2:18535392-18535411 Msa0060720:intron 25.0%
! GTATGAATATGAGAAAAGTA+TGG - chr1_2:18535418-18535437 Msa0060720:intron 25.0%
!! ATATGAGAAAAGTATGGATT+TGG - chr1_2:18535424-18535443 Msa0060720:intron 25.0%
!! TATGAGAAAAGTATGGATTT+GGG - chr1_2:18535425-18535444 Msa0060720:intron 25.0%
! AACAAACATCACCAATATAA+TGG + chr1_2:18535480-18535499 None:intergenic 25.0%
!! AGGTAACGTAGTTTAAAATT+GGG + chr1_2:18535576-18535595 None:intergenic 25.0%
!! AAGGTAACGTAGTTTAAAAT+TGG + chr1_2:18535577-18535596 None:intergenic 25.0%
! GTTTAAATTTGCAACTAAGA+CGG + chr1_2:18535876-18535895 None:intergenic 25.0%
! AAAAATGCGACACTTATTAT+GGG + chr1_2:18536003-18536022 None:intergenic 25.0%
! TAAAAATGCGACACTTATTA+TGG + chr1_2:18536004-18536023 None:intergenic 25.0%
! TTCTTTATTCAGTGTCTATT+GGG + chr1_2:18536541-18536560 None:intergenic 25.0%
! TGTAGCTCATATAGTTAAAA+AGG + chr1_2:18536685-18536704 None:intergenic 25.0%
! TGTCAATAAGCATTTCTATT+TGG - chr1_2:18536823-18536842 Msa0060720:CDS 25.0%
! AAAAACACCTATTCATACTT+TGG - chr1_2:18537261-18537280 Msa0060720:CDS 25.0%
!! ATTTTTCTTTGTTGGAAACT+TGG + chr1_2:18537414-18537433 None:intergenic 25.0%
! AAGTTTCCAACAAAGAAAAA+TGG - chr1_2:18537413-18537432 Msa0060720:CDS 25.0%
! AGTTTCCAACAAAGAAAAAT+GGG - chr1_2:18537414-18537433 Msa0060720:CDS 25.0%
!!! AAATTCCCATTTTTCTTTGT+TGG + chr1_2:18537422-18537441 None:intergenic 25.0%
!! GAATTTGAGAAAAAGTTGAT+AGG - chr1_2:18537436-18537455 Msa0060720:CDS 25.0%
! TCATCTTGGAATTTCTAATA+TGG + chr1_2:18537492-18537511 None:intergenic 25.0%
!!! ATACAAATGGTTGATAGAAA+GGG + chr1_2:18537627-18537646 None:intergenic 25.0%
!!! TATACAAATGGTTGATAGAA+AGG + chr1_2:18537628-18537647 None:intergenic 25.0%
!! TTTTATATGAAAATCGGTTG+AGG - chr1_2:18537649-18537668 Msa0060720:five_prime_UTR 25.0%
! TTATGTAGAGGAAAAGAAAT+TGG - chr1_2:18537678-18537697 Msa0060720:five_prime_UTR 25.0%
GTATAGAAACTAGAAAGAGA+AGG + chr1_2:18532811-18532830 None:intergenic 30.0%
! ACTCATTCTGTGCAAAATTT+TGG + chr1_2:18532889-18532908 None:intergenic 30.0%
! AGTTAGTTAACTAGGAGTAT+AGG + chr1_2:18532927-18532946 None:intergenic 30.0%
AAGGAAAATGGGAAAGAAAA+CGG + chr1_2:18532956-18532975 None:intergenic 30.0%
! GTTCATTTGATATGGATTGT+TGG + chr1_2:18533250-18533269 None:intergenic 30.0%
TGGACATTGTTCACTAAAAA+TGG - chr1_2:18533330-18533349 Msa0060720:intron 30.0%
CCATACATAGCAATTAACAA+AGG + chr1_2:18533423-18533442 None:intergenic 30.0%
CCTTTGTTAATTGCTATGTA+TGG - chr1_2:18533420-18533439 Msa0060720:intron 30.0%
TGATTATTCAGGTAGCTTAA+TGG - chr1_2:18533443-18533462 Msa0060720:intron 30.0%
! AACCAAGACATTCCAATTTT+GGG - chr1_2:18533829-18533848 Msa0060720:intron 30.0%
! CCATTTTCTTCGAAATTTGA+AGG + chr1_2:18533906-18533925 None:intergenic 30.0%
CCTTCAAATTTCGAAGAAAA+TGG - chr1_2:18533903-18533922 Msa0060720:intron 30.0%
!! TTTTGATTCTGATTCTTCAC+AGG + chr1_2:18534023-18534042 None:intergenic 30.0%
GCTGATGAACATAATCAAAA+TGG - chr1_2:18534218-18534237 Msa0060720:CDS 30.0%
AATGGTGAAACCAATAACAA+AGG - chr1_2:18534236-18534255 Msa0060720:CDS 30.0%
! GAAACCAATAACAAAGGTAT+AGG - chr1_2:18534242-18534261 Msa0060720:CDS 30.0%
! ATTGCCTATACCTTTGTTAT+TGG + chr1_2:18534249-18534268 None:intergenic 30.0%
! TAACAAAGGTATAGGCAATT+AGG - chr1_2:18534250-18534269 Msa0060720:CDS 30.0%
TTTAAATTGCACCTACAATC+GGG - chr1_2:18534303-18534322 Msa0060720:intron 30.0%
ACTATAATTAACCCGATTGT+AGG + chr1_2:18534317-18534336 None:intergenic 30.0%
AGGTTTAATCTTAGAACCAA+TGG + chr1_2:18534479-18534498 None:intergenic 30.0%
TTAAACCTAGTATATTCCGA+AGG - chr1_2:18534491-18534510 Msa0060720:intron 30.0%
TTGAATAGGTGTTTGGATTA+CGG + chr1_2:18534897-18534916 None:intergenic 30.0%
TTGAGGAGAAATTGGATAAA+TGG + chr1_2:18535247-18535266 None:intergenic 30.0%
ACTCTCAAATTCAATCATGT+TGG + chr1_2:18535390-18535409 None:intergenic 30.0%
CATGATTGAATTTGAGAGTA+TGG - chr1_2:18535391-18535410 Msa0060720:intron 30.0%
! ATGAGAAAAGTATGGATTTG+GGG - chr1_2:18535426-18535445 Msa0060720:intron 30.0%
! AACATCACCAATATAATGGA+TGG + chr1_2:18535476-18535495 None:intergenic 30.0%
TCAACCACTATGGTTAATTA+GGG + chr1_2:18535640-18535659 None:intergenic 30.0%
TTCAACCACTATGGTTAATT+AGG + chr1_2:18535641-18535660 None:intergenic 30.0%
AACCATAGTGGTTGAAATAA+TGG - chr1_2:18535645-18535664 Msa0060720:CDS 30.0%
TTCCATTATTTCAACCACTA+TGG + chr1_2:18535650-18535669 None:intergenic 30.0%
ATATCAACAAAAGGGTAAAG+TGG + chr1_2:18536068-18536087 None:intergenic 30.0%
!!! TAAGGTTTAGTTTTACAGCT+TGG - chr1_2:18536190-18536209 Msa0060720:intron 30.0%
TCTTTATTCAGTGTCTATTG+GGG + chr1_2:18536540-18536559 None:intergenic 30.0%
CTTCTTTATTCAGTGTCTAT+TGG + chr1_2:18536542-18536561 None:intergenic 30.0%
!! GAGAATGGATTAGCATATAT+TGG + chr1_2:18536849-18536868 None:intergenic 30.0%
! ACTTATGGTAATGAATGTTG+TGG - chr1_2:18536970-18536989 Msa0060720:CDS 30.0%
! TACTCTTTTGCAAACACAAA+TGG + chr1_2:18537030-18537049 None:intergenic 30.0%
TTGAATTGCAGGGTTATATT+TGG - chr1_2:18537185-18537204 Msa0060720:CDS 30.0%
!! ATAGGTGTTTTTACAAACCA+AGG + chr1_2:18537253-18537272 None:intergenic 30.0%
CTATCTTCCAAAGTATGAAT+AGG + chr1_2:18537271-18537290 None:intergenic 30.0%
! GAAGTATTCTATTCTTCACA+AGG - chr1_2:18537315-18537334 Msa0060720:CDS 30.0%
TATGGAGACATTAGCATTAT+GGG + chr1_2:18537474-18537493 None:intergenic 30.0%
ATATGGAGACATTAGCATTA+TGG + chr1_2:18537475-18537494 None:intergenic 30.0%
CCTTGAAAATTACATCATCT+TGG + chr1_2:18537506-18537525 None:intergenic 30.0%
! CCAAGATGATGTAATTTTCA+AGG - chr1_2:18537503-18537522 Msa0060720:five_prime_UTR 30.0%
AGACATAAAAGAGGAAAACA+TGG - chr1_2:18537558-18537577 Msa0060720:five_prime_UTR 30.0%
GACATAAAAGAGGAAAACAT+GGG - chr1_2:18537559-18537578 Msa0060720:five_prime_UTR 30.0%
TTGAGGAAGTAATTATGTAG+AGG - chr1_2:18537666-18537685 Msa0060720:five_prime_UTR 30.0%
!! AGGAGTACTTGTAATAGTAC+TGG + chr1_2:18532854-18532873 None:intergenic 35.0%
!! AATTTTGGTGACTACTCTGT+AGG + chr1_2:18532874-18532893 None:intergenic 35.0%
! AGTTAACTAGGAGTATAGGA+AGG + chr1_2:18532923-18532942 None:intergenic 35.0%
! GGTTGGTTAGTTAGTTAACT+AGG + chr1_2:18532935-18532954 None:intergenic 35.0%
AAAATGGGAAAGAAAACGGT+TGG + chr1_2:18532952-18532971 None:intergenic 35.0%
TTTATACCGGAACATTGATC+CGG + chr1_2:18533174-18533193 None:intergenic 35.0%
TTGAGATGAAGTGGAATGAA+AGG + chr1_2:18533227-18533246 None:intergenic 35.0%
TGCTAGTAGCACTTTCATTA+TGG - chr1_2:18533310-18533329 Msa0060720:CDS 35.0%
ATCAACACTTCCTAACACTT+TGG - chr1_2:18533386-18533405 Msa0060720:intron 35.0%
ACTTCCTAACACTTTGGTTA+TGG - chr1_2:18533392-18533411 Msa0060720:intron 35.0%
CTTCCTAACACTTTGGTTAT+GGG - chr1_2:18533393-18533412 Msa0060720:intron 35.0%
! ATTCCCATAACCAAAGTGTT+AGG + chr1_2:18533399-18533418 None:intergenic 35.0%
GCTATGTATGGTGATTATTC+AGG - chr1_2:18533432-18533451 Msa0060720:intron 35.0%
!! TAGCTTAATGGTTCAAGTTG+TGG - chr1_2:18533455-18533474 Msa0060720:CDS 35.0%
TGGTTCTTCAGTGTATCATT+TGG - chr1_2:18533475-18533494 Msa0060720:CDS 35.0%
!!! CTTTTTCTTTTTGAGTACCG+TGG - chr1_2:18533510-18533529 Msa0060720:CDS 35.0%
TGATTAAAAGCTTAGCACCA+CGG + chr1_2:18533530-18533549 None:intergenic 35.0%
!! TGGTGCTAAGCTTTTAATCA+TGG - chr1_2:18533530-18533549 Msa0060720:intron 35.0%
ATCGACCTTAAAGGAAACAA+TGG + chr1_2:18533580-18533599 None:intergenic 35.0%
!! TGTTTCCTTTAAGGTCGATT+CGG - chr1_2:18533581-18533600 Msa0060720:intron 35.0%
GGAAGTTACATGTTACTGTT+AGG - chr1_2:18533664-18533683 Msa0060720:intron 35.0%
! CAACCAAGACATTCCAATTT+TGG - chr1_2:18533828-18533847 Msa0060720:intron 35.0%
! ACCAAGACATTCCAATTTTG+GGG - chr1_2:18533830-18533849 Msa0060720:intron 35.0%
CAAATCATTAGCCCCAAAAT+TGG + chr1_2:18533844-18533863 None:intergenic 35.0%
AAATTTGAAGGTCTAGGAGT+TGG + chr1_2:18533894-18533913 None:intergenic 35.0%
TCTTCGAAATTTGAAGGTCT+AGG + chr1_2:18533900-18533919 None:intergenic 35.0%
TTAGTAGTAGAGGAGAATTC+CGG + chr1_2:18533999-18534018 None:intergenic 35.0%
AAGAGTTGCATATGTTTGTG+TGG - chr1_2:18534096-18534115 Msa0060720:intron 35.0%
AATTGAAGGTGGTCAAGAAA+AGG - chr1_2:18534660-18534679 Msa0060720:intron 35.0%
GTCAAGAAAAGGAAATTGGT+GGG - chr1_2:18534671-18534690 Msa0060720:intron 35.0%
TCAAGAAAAGGAAATTGGTG+GGG - chr1_2:18534672-18534691 Msa0060720:intron 35.0%
! AAGAGGACTTCAAGTTCAAT+GGG - chr1_2:18534695-18534714 Msa0060720:intron 35.0%
GTCTCATACTCATTATGGTT+TGG - chr1_2:18534860-18534879 Msa0060720:intron 35.0%
! TCATACTCATTATGGTTTGG+AGG - chr1_2:18534863-18534882 Msa0060720:intron 35.0%
ATGAGACTTGAATAGGTGTT+TGG + chr1_2:18534904-18534923 None:intergenic 35.0%
AACACCTATTCAAGTCTCAT+TGG - chr1_2:18534904-18534923 Msa0060720:intron 35.0%
AAGACCAATGAGACTTGAAT+AGG + chr1_2:18534911-18534930 None:intergenic 35.0%
!! CAAGTCTCATTGGTCTTATT+TGG - chr1_2:18534914-18534933 Msa0060720:intron 35.0%
!!! TTGTTGGTTTTCTTACATGC+AGG - chr1_2:18535119-18535138 Msa0060720:intron 35.0%
! CTATGTTTAGCTTAGGTAAG+TGG - chr1_2:18535212-18535231 Msa0060720:intron 35.0%
! TTGAATTTGAGAGTATGGGT+AGG - chr1_2:18535396-18535415 Msa0060720:intron 35.0%
! TGAGAAAAGTATGGATTTGG+GGG - chr1_2:18535427-18535446 Msa0060720:intron 35.0%
CTCATAGCCATCCATTATAT+TGG - chr1_2:18535466-18535485 Msa0060720:intron 35.0%
TAAAATTGGGTCCCATATGT+CGG + chr1_2:18535563-18535582 None:intergenic 35.0%
AGTAAGGAATCTTATAGCCA+TGG + chr1_2:18536302-18536321 None:intergenic 35.0%
ATGGCTATAAGATTCCTTAC+TGG - chr1_2:18536301-18536320 Msa0060720:CDS 35.0%
AACAATAGCTACATGTAGGA+GGG + chr1_2:18536374-18536393 None:intergenic 35.0%
AGACACTGAATAAAGAAGAG+TGG - chr1_2:18536544-18536563 Msa0060720:CDS 35.0%
CACATCAAGTACGAAAAAAG+AGG - chr1_2:18536612-18536631 Msa0060720:CDS 35.0%
TGAATGTTGTGGTTGACAAT+AGG - chr1_2:18536981-18537000 Msa0060720:CDS 35.0%
TGGAAGATAGTAAACATGCA+TGG - chr1_2:18537281-18537300 Msa0060720:CDS 35.0%
CTTGGAATGACAATTTCTGT+TGG + chr1_2:18537396-18537415 None:intergenic 35.0%
! AGAGAGCATGTAACATTGTA+AGG - chr1_2:18537534-18537553 Msa0060720:five_prime_UTR 35.0%
! GAGAGCATGTAACATTGTAA+GGG - chr1_2:18537535-18537554 Msa0060720:five_prime_UTR 35.0%
TTGTAAGGGAGACATAAAAG+AGG - chr1_2:18537549-18537568 Msa0060720:five_prime_UTR 35.0%
AAAAGAGGAAAACATGGGAA+CGG - chr1_2:18537564-18537583 Msa0060720:five_prime_UTR 35.0%
AAGGTGTGTCAGAGAAAGTA+GGG + chr1_2:18532792-18532811 None:intergenic 40.0%
GGTTTGTGAGACTAAGATGA+GGG + chr1_2:18532833-18532852 None:intergenic 40.0%
! TGGTTTGTGAGACTAAGATG+AGG + chr1_2:18532834-18532853 None:intergenic 40.0%
GTTGAATGGCATGTGAAGAA+AGG + chr1_2:18533010-18533029 None:intergenic 40.0%
TTACACTGTCTTAACAGCAG+TGG - chr1_2:18533086-18533105 Msa0060720:three_prime_UTR 40.0%
GTTGCTATGATCTTAGCCTA+CGG - chr1_2:18533120-18533139 Msa0060720:three_prime_UTR 40.0%
TATGATCTTAGCCTACGGTT+CGG - chr1_2:18533125-18533144 Msa0060720:three_prime_UTR 40.0%
GTGAGAAAATCTTCCACCAA+CGG + chr1_2:18533152-18533171 None:intergenic 40.0%
! TTGGTGGAAGATTTTCTCAC+CGG - chr1_2:18533152-18533171 Msa0060720:three_prime_UTR 40.0%
ATGAAGTGGAATGAAAGGAG+AGG + chr1_2:18533222-18533241 None:intergenic 40.0%
! GATTGTTGGTTGAGATGAAG+TGG + chr1_2:18533236-18533255 None:intergenic 40.0%
GGCTTCCATTGTTTCCTTTA+AGG - chr1_2:18533572-18533591 Msa0060720:intron 40.0%
AACATCCGAATCGACCTTAA+AGG + chr1_2:18533589-18533608 None:intergenic 40.0%
TCGGATGTTATGTCGTTAGA+TGG - chr1_2:18533600-18533619 Msa0060720:intron 40.0%
CTTGAAACTGATGCATCAGT+TGG - chr1_2:18533633-18533652 Msa0060720:intron 40.0%
!! ATGCATCAGTTGGTGATGAT+GGG - chr1_2:18533643-18533662 Msa0060720:intron 40.0%
TCAGCTCCAGTCAAATTTGA+CGG + chr1_2:18533735-18533754 None:intergenic 40.0%
GTTGAAATTAGACCCTCTTG+GGG + chr1_2:18533778-18533797 None:intergenic 40.0%
GGTTGAAATTAGACCCTCTT+GGG + chr1_2:18533779-18533798 None:intergenic 40.0%
TGGTTGAAATTAGACCCTCT+TGG + chr1_2:18533780-18533799 None:intergenic 40.0%
AGGGTCTAATTTCAACCATC+AGG - chr1_2:18533782-18533801 Msa0060720:intron 40.0%
TCATGGAGTAAAACTCCTGA+TGG + chr1_2:18533800-18533819 None:intergenic 40.0%
! TCAGGAGTTTTACTCCATGA+TGG - chr1_2:18533800-18533819 Msa0060720:intron 40.0%
! CAGGAGTTTTACTCCATGAT+GGG - chr1_2:18533801-18533820 Msa0060720:intron 40.0%
!! TCTTGGTTGATAACCCATCA+TGG + chr1_2:18533817-18533836 None:intergenic 40.0%
!! TCCTAGATTCGGGTTTTATC+CGG - chr1_2:18533935-18533954 Msa0060720:intron 40.0%
AACTGTGCCTAATTCGTATC+CGG - chr1_2:18533965-18533984 Msa0060720:intron 40.0%
TAGTAGTAGAGGAGAATTCC+GGG + chr1_2:18533998-18534017 None:intergenic 40.0%
CTTCACAGGTTTAGTAGTAG+AGG + chr1_2:18534009-18534028 None:intergenic 40.0%
TTTGTCTGCAATTGAACCTG+CGG + chr1_2:18534062-18534081 None:intergenic 40.0%
CAGGTTCAATTGCAGACAAA+AGG - chr1_2:18534062-18534081 Msa0060720:intron 40.0%
ATTGCAGACAAAAGGTTCTC+AGG - chr1_2:18534070-18534089 Msa0060720:intron 40.0%
CCTCAATGTCTTCCGAAATT+CGG - chr1_2:18534154-18534173 Msa0060720:CDS 40.0%
CTTCGGATTGTTCCGAATTT+CGG + chr1_2:18534169-18534188 None:intergenic 40.0%
AAATTCGGAACAATCCGAAG+AGG - chr1_2:18534169-18534188 Msa0060720:CDS 40.0%
AATTCGGAACAATCCGAAGA+GGG - chr1_2:18534170-18534189 Msa0060720:CDS 40.0%
CAACGGAGATGTAGTTAAAG+AGG + chr1_2:18534359-18534378 None:intergenic 40.0%
CGGAGAGATATAGTACTCTT+AGG - chr1_2:18534396-18534415 Msa0060720:intron 40.0%
ATTCAAGCCTCTTGATCCAT+TGG - chr1_2:18534460-18534479 Msa0060720:intron 40.0%
CTTAGAACCAATGGATCAAG+AGG + chr1_2:18534470-18534489 None:intergenic 40.0%
CATGTCCTTCGGAATATACT+AGG + chr1_2:18534499-18534518 None:intergenic 40.0%
TTGTTGGAGTTCATGTCCTT+CGG + chr1_2:18534510-18534529 None:intergenic 40.0%
GGTGGTCAAGAAAAGGAAAT+TGG - chr1_2:18534667-18534686 Msa0060720:intron 40.0%
GGTCAAGAAAAGGAAATTGG+TGG - chr1_2:18534670-18534689 Msa0060720:intron 40.0%
! GAAGAGGACTTCAAGTTCAA+TGG - chr1_2:18534694-18534713 Msa0060720:intron 40.0%
! AGAGGACTTCAAGTTCAATG+GGG - chr1_2:18534696-18534715 Msa0060720:intron 40.0%
GACACGTCTCATACTCATTA+TGG - chr1_2:18534855-18534874 Msa0060720:intron 40.0%
TACCTACCTAAAGGCAACAA+GGG + chr1_2:18534941-18534960 None:intergenic 40.0%
ATACCTACCTAAAGGCAACA+AGG + chr1_2:18534942-18534961 None:intergenic 40.0%
!! TTGGTTTTCTTACATGCAGG+TGG - chr1_2:18535122-18535141 Msa0060720:intron 40.0%
! TGGTTTTCTTACATGCAGGT+GGG - chr1_2:18535123-18535142 Msa0060720:intron 40.0%
ATTTCCATACTGTCTGATGC+TGG - chr1_2:18535178-18535197 Msa0060720:intron 40.0%
! GGAATGGCTATGTTTAGCTT+AGG - chr1_2:18535205-18535224 Msa0060720:intron 40.0%
AAAATTGGGTCCCATATGTC+GGG + chr1_2:18535562-18535581 None:intergenic 40.0%
ACCTTCTTCTTCAGACACAA+TGG - chr1_2:18535592-18535611 Msa0060720:CDS 40.0%
TCCATTGTGTCTGAAGAAGA+AGG + chr1_2:18535596-18535615 None:intergenic 40.0%
TTCTTCAGACACAATGGACA+AGG - chr1_2:18535598-18535617 Msa0060720:CDS 40.0%
TCTTCAGACACAATGGACAA+GGG - chr1_2:18535599-18535618 Msa0060720:CDS 40.0%
GCTACCCTAATTAACCATAG+TGG - chr1_2:18535633-18535652 Msa0060720:CDS 40.0%
AAGACACACATAGTGAGACA+GGG + chr1_2:18535744-18535763 None:intergenic 40.0%
AAAGACACACATAGTGAGAC+AGG + chr1_2:18535745-18535764 None:intergenic 40.0%
AACCCAAGATCATTGCATGT+GGG - chr1_2:18536257-18536276 Msa0060720:intron 40.0%
TTCCCACATGCAATGATCTT+GGG + chr1_2:18536262-18536281 None:intergenic 40.0%
ATTCCCACATGCAATGATCT+TGG + chr1_2:18536263-18536282 None:intergenic 40.0%
! TTCTGTTGCTTCATTTGCCA+TGG - chr1_2:18536282-18536301 Msa0060720:CDS 40.0%
GAACAATAGCTACATGTAGG+AGG + chr1_2:18536375-18536394 None:intergenic 40.0%
CCTGAACAATAGCTACATGT+AGG + chr1_2:18536378-18536397 None:intergenic 40.0%
CCTACATGTAGCTATTGTTC+AGG - chr1_2:18536375-18536394 Msa0060720:CDS 40.0%
!! GTACGAAAAAAGAGGTACTG+CGG - chr1_2:18536620-18536639 Msa0060720:CDS 40.0%
ACAAATGGAACAATCCCTTG+TGG + chr1_2:18537015-18537034 None:intergenic 40.0%
TGCTTACGCTGTACTAAGAA+TGG + chr1_2:18537067-18537086 None:intergenic 40.0%
CTACTCTACTACATTCTCCT+TGG - chr1_2:18537233-18537252 Msa0060720:CDS 40.0%
ATGTTACATGCTCTCTCTTG+AGG + chr1_2:18537530-18537549 None:intergenic 40.0%
AGGTGTGTCAGAGAAAGTAG+GGG + chr1_2:18532791-18532810 None:intergenic 45.0%
! GAAGGTGTGTCAGAGAAAGT+AGG + chr1_2:18532793-18532812 None:intergenic 45.0%
TTCTCACCGGATCAATGTTC+CGG - chr1_2:18533165-18533184 Msa0060720:three_prime_UTR 45.0%
GTGGAATGAAAGGAGAGGTA+CGG + chr1_2:18533217-18533236 None:intergenic 45.0%
AAAGGAAACAATGGAAGCCG+CGG + chr1_2:18533571-18533590 None:intergenic 45.0%
!! GATGCATCAGTTGGTGATGA+TGG - chr1_2:18533642-18533661 Msa0060720:intron 45.0%
GCCCCAAAATTGGAATGTCT+TGG + chr1_2:18533834-18533853 None:intergenic 45.0%
TCTGTCCAGTCTTCTTCTAG+AGG - chr1_2:18533867-18533886 Msa0060720:intron 45.0%
! TTGGTCCTCTAGAAGAAGAC+TGG + chr1_2:18533875-18533894 None:intergenic 45.0%
GGTGCAAGTTCTCCTAGATT+CGG - chr1_2:18533924-18533943 Msa0060720:intron 45.0%
GTGCAAGTTCTCCTAGATTC+GGG - chr1_2:18533925-18533944 Msa0060720:intron 45.0%
! TTTGGCACCGGATACGAATT+AGG + chr1_2:18533975-18533994 None:intergenic 45.0%
AATTGAACCTGCGGTTGTTG+CGG + chr1_2:18534053-18534072 None:intergenic 45.0%
CCGAATTTCGGAAGACATTG+AGG + chr1_2:18534157-18534176 None:intergenic 45.0%
AAAGGAAATTGGTGGGGAAG+AGG - chr1_2:18534678-18534697 Msa0060720:intron 45.0%
! CTTCAAGTTCAATGGGGTGA+AGG - chr1_2:18534702-18534721 Msa0060720:intron 45.0%
AAGTTCAATGGGGTGAAGGT+AGG - chr1_2:18534706-18534725 Msa0060720:intron 45.0%
AAGGTAGGAGAACAAGGAGA+AGG - chr1_2:18534721-18534740 Msa0060720:intron 45.0%
ACCCAATGGACCTAACAAGT+TGG - chr1_2:18534744-18534763 Msa0060720:intron 45.0%
!! CCCAACTTGTTAGGTCCATT+GGG + chr1_2:18534748-18534767 None:intergenic 45.0%
CCCAATGGACCTAACAAGTT+GGG - chr1_2:18534745-18534764 Msa0060720:intron 45.0%
! GAATTCGAGCCCAACTTGTT+AGG + chr1_2:18534757-18534776 None:intergenic 45.0%
TTTGGTCCCTTGTTGCCTTT+AGG - chr1_2:18534932-18534951 Msa0060720:intron 45.0%
AAGACCAGCATCAGACAGTA+TGG + chr1_2:18535185-18535204 None:intergenic 45.0%
! ATACTGTCTGATGCTGGTCT+TGG - chr1_2:18535184-18535203 Msa0060720:intron 45.0%
AGCATAATGTCCCCGACATA+TGG - chr1_2:18535548-18535567 Msa0060720:intron 45.0%
GCATAATGTCCCCGACATAT+GGG - chr1_2:18535549-18535568 Msa0060720:intron 45.0%
AAATTGGGTCCCATATGTCG+GGG + chr1_2:18535561-18535580 None:intergenic 45.0%
CAACCCAAGATCATTGCATG+TGG - chr1_2:18536256-18536275 Msa0060720:intron 45.0%
TCCATTCTCTCTCGCTTCTT+TGG - chr1_2:18536860-18536879 Msa0060720:CDS 45.0%
TCCAAAGAAGCGAGAGAGAA+TGG + chr1_2:18536864-18536883 None:intergenic 45.0%
AATAGGCTGCACTTCCACAA+GGG - chr1_2:18536998-18537017 Msa0060720:CDS 45.0%
CTGTACTAAGAATGGCTGGA+TGG + chr1_2:18537059-18537078 None:intergenic 45.0%
TACGCTGTACTAAGAATGGC+TGG + chr1_2:18537063-18537082 None:intergenic 45.0%
!! ATATTAATAATGATTATTTA+AGG - chr1_2:18534582-18534601 Msa0060720:intron 5.0%
!!! TTATGTTTTTTTTTAAATAT+CGG - chr1_2:18535800-18535819 Msa0060720:CDS 5.0%
!!! TTATTTATATTGATTTAAAT+AGG - chr1_2:18535961-18535980 Msa0060720:intron 5.0%
GGTGTGTCAGAGAAAGTAGG+GGG + chr1_2:18532790-18532809 None:intergenic 50.0%
TTAGGAAGTCTAACGCGTCG+CGG - chr1_2:18533682-18533701 Msa0060720:intron 50.0%
CCAGTCAAATTTGACGGTCG+CGG + chr1_2:18533729-18533748 None:intergenic 50.0%
GAAATTAGACCCTCTTGGGG+TGG + chr1_2:18533775-18533794 None:intergenic 50.0%
GCCGGATAAAACCCGAATCT+AGG + chr1_2:18533939-18533958 None:intergenic 50.0%
GTAGAGGAGAATTCCGGGTT+TGG + chr1_2:18533993-18534012 None:intergenic 50.0%
!! CTCAAGTGCTTCACCGGTTT+CGG - chr1_2:18534121-18534140 Msa0060720:intron 50.0%
!! ACAATCCGAAGAGGGTGCTA+AGG - chr1_2:18534178-18534197 Msa0060720:CDS 50.0%
GATCTCCTTAGCACCCTCTT+CGG + chr1_2:18534186-18534205 None:intergenic 50.0%
!! AAGAGGGTGCTAAGGAGATC+AGG - chr1_2:18534186-18534205 Msa0060720:CDS 50.0%
TGCTAAGGAGATCAGGATGG+TGG - chr1_2:18534193-18534212 Msa0060720:CDS 50.0%
! TAAGGAGATCAGGATGGTGG+TGG - chr1_2:18534196-18534215 Msa0060720:CDS 50.0%
GAACAAGGAGAAGGACCCAA+TGG - chr1_2:18534730-18534749 Msa0060720:intron 50.0%
!! GCCCAACTTGTTAGGTCCAT+TGG + chr1_2:18534749-18534768 None:intergenic 50.0%
TGTCGGAAAACTCATGCCTC+CGG - chr1_2:18534822-18534841 Msa0060720:intron 50.0%
GTCCCTTGTTGCCTTTAGGT+AGG - chr1_2:18534936-18534955 Msa0060720:intron 50.0%
!! GTCTGATGCTGGTCTTGGAA+TGG - chr1_2:18535189-18535208 Msa0060720:intron 50.0%
TCAGACACAATGGACAAGGG+TGG - chr1_2:18535602-18535621 Msa0060720:CDS 50.0%
CCATAACTGCTGGACCAGTA+AGG + chr1_2:18536318-18536337 None:intergenic 50.0%
CCTTACTGGTCCAGCAGTTA+TGG - chr1_2:18536315-18536334 Msa0060720:CDS 50.0%
CAATAGGCTGCACTTCCACA+AGG - chr1_2:18536997-18537016 Msa0060720:CDS 50.0%
CGCGACGAAGCGGTTTATAC+CGG + chr1_2:18533187-18533206 None:intergenic 55.0%
CGGTATAAACCGCTTCGTCG+CGG - chr1_2:18533185-18533204 Msa0060720:three_prime_UTR 55.0%
GGAGCAGTTTCCAGAAACCG+CGG - chr1_2:18533551-18533570 Msa0060720:intron 55.0%
ACAATGGAAGCCGCGGTTTC+TGG + chr1_2:18533564-18533583 None:intergenic 55.0%
CCGCGACCGTCAAATTTGAC+TGG - chr1_2:18533726-18533745 Msa0060720:intron 55.0%
TTAGGCACAGTTTGCGCTGC+CGG + chr1_2:18533957-18533976 None:intergenic 55.0%
! TTCGTATCCGGTGCCAAACC+CGG - chr1_2:18533977-18533996 Msa0060720:intron 55.0%
GAGAATTCCGGGTTTGGCAC+CGG + chr1_2:18533987-18534006 None:intergenic 55.0%
TTTGATGCCGCAACAACCGC+AGG - chr1_2:18534043-18534062 Msa0060720:intron 55.0%
GTGGAGCTCAAGTGCTTCAC+CGG - chr1_2:18534115-18534134 Msa0060720:intron 55.0%
!! TCACCGGTTTCGGAAAGTGC+TGG - chr1_2:18534131-18534150 Msa0060720:intron 55.0%
AGGCCAGCACTTTCCGAAAC+CGG + chr1_2:18534137-18534156 None:intergenic 55.0%
GGGTGCTAAGGAGATCAGGA+TGG - chr1_2:18534190-18534209 Msa0060720:CDS 55.0%
GGGGTGAAGGTAGGAGAACA+AGG - chr1_2:18534715-18534734 Msa0060720:intron 55.0%
GTTGGGCTCGAATTCAACGC+CGG - chr1_2:18534762-18534781 Msa0060720:intron 55.0%
GACACTTGAATCCGCGACTC+CGG + chr1_2:18534806-18534825 None:intergenic 55.0%
GGAGTCGCGGATTCAAGTGT+CGG - chr1_2:18534805-18534824 Msa0060720:intron 55.0%
GACACAATGGACAAGGGTGG+TGG - chr1_2:18535605-18535624 Msa0060720:CDS 55.0%
GAAGCTGCTGCCATAACTGC+TGG + chr1_2:18536328-18536347 None:intergenic 55.0%
CTACATGTAGGAGGGTCCCA+CGG + chr1_2:18536366-18536385 None:intergenic 55.0%
!! TAGCCTACGGTTCGGTCCGT+TGG - chr1_2:18533133-18533152 Msa0060720:three_prime_UTR 60.0%
AGTCTCAGCTCCACCCCAAG+AGG - chr1_2:18533762-18533781 Msa0060720:intron 60.0%
GTCTCAGCTCCACCCCAAGA+GGG - chr1_2:18533763-18533782 Msa0060720:intron 60.0%
!! GTGGCTTTAGGGTGGAGCTC+CGG + chr1_2:18534784-18534803 None:intergenic 60.0%
GAGCTCCACCCTAAAGCCAC+CGG - chr1_2:18534784-18534803 Msa0060720:intron 60.0%
ACTTGAATCCGCGACTCCGG+TGG + chr1_2:18534803-18534822 None:intergenic 60.0%
AGACGTGTCATGACGCTCGC+CGG + chr1_2:18534844-18534863 None:intergenic 60.0%
GCAGCAGCTTCTATCGCCGT+TGG - chr1_2:18536337-18536356 Msa0060720:CDS 60.0%
CCACCAACGGACCGAACCGT+AGG + chr1_2:18533139-18533158 None:intergenic 65.0%
!! CCTACGGTTCGGTCCGTTGG+TGG - chr1_2:18533136-18533155 Msa0060720:three_prime_UTR 65.0%
CGGCGAAAACCGCGACGAAG+CGG + chr1_2:18533197-18533216 None:intergenic 65.0%
GGAAGTCTAACGCGTCGCGG+AGG - chr1_2:18533685-18533704 Msa0060720:intron 65.0%
!! CGACTCCGGTGGCTTTAGGG+TGG + chr1_2:18534792-18534811 None:intergenic 65.0%
! CCGCGACTCCGGTGGCTTTA+GGG + chr1_2:18534795-18534814 None:intergenic 65.0%
CCCTAAAGCCACCGGAGTCG+CGG - chr1_2:18534792-18534811 Msa0060720:intron 65.0%
TCCGCGACTCCGGTGGCTTT+AGG + chr1_2:18534796-18534815 None:intergenic 65.0%
! TCTATCGCCGTTGGCCTCCG+TGG - chr1_2:18536346-18536365 Msa0060720:CDS 65.0%
! CTATCGCCGTTGGCCTCCGT+GGG - chr1_2:18536347-18536366 Msa0060720:CDS 65.0%
CATGTAGGAGGGTCCCACGG+AGG + chr1_2:18536363-18536382 None:intergenic 65.0%
CGTGTCATGACGCTCGCCGG+AGG + chr1_2:18534841-18534860 None:intergenic 70.0%
GAGGGTCCCACGGAGGCCAA+CGG + chr1_2:18536356-18536375 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 18532731 18537801 18532731 ID=Msa0060720;Name=Msa0060720
chr1_2 mRNA 18532731 18537801 18532731 ID=Msa0060720-mRNA-1;Parent=Msa0060720;Name=Msa0060720-mRNA-1;_AED=0.02;_eAED=0.02;_QI=335|1|1|1|1|1|6|539|621
chr1_2 exon 18532731 18533336 18532731 ID=Msa0060720-mRNA-1:exon:7205;Parent=Msa0060720-mRNA-1
chr1_2 exon 18533453 18533529 18533453 ID=Msa0060720-mRNA-1:exon:7204;Parent=Msa0060720-mRNA-1
chr1_2 exon 18534136 18534293 18534136 ID=Msa0060720-mRNA-1:exon:7203;Parent=Msa0060720-mRNA-1
chr1_2 exon 18535306 18535391 18535306 ID=Msa0060720-mRNA-1:exon:7202;Parent=Msa0060720-mRNA-1
chr1_2 exon 18535579 18535864 18535579 ID=Msa0060720-mRNA-1:exon:7201;Parent=Msa0060720-mRNA-1
chr1_2 exon 18536275 18537801 18536275 ID=Msa0060720-mRNA-1:exon:7200;Parent=Msa0060720-mRNA-1
chr1_2 five_prime_UTR 18537467 18537801 18537467 ID=Msa0060720-mRNA-1:five_prime_utr;Parent=Msa0060720-mRNA-1
chr1_2 CDS 18536275 18537466 18536275 ID=Msa0060720-mRNA-1:cds;Parent=Msa0060720-mRNA-1
chr1_2 CDS 18535579 18535864 18535579 ID=Msa0060720-mRNA-1:cds;Parent=Msa0060720-mRNA-1
chr1_2 CDS 18535306 18535391 18535306 ID=Msa0060720-mRNA-1:cds;Parent=Msa0060720-mRNA-1
chr1_2 CDS 18534136 18534293 18534136 ID=Msa0060720-mRNA-1:cds;Parent=Msa0060720-mRNA-1
chr1_2 CDS 18533453 18533529 18533453 ID=Msa0060720-mRNA-1:cds;Parent=Msa0060720-mRNA-1
chr1_2 CDS 18533270 18533336 18533270 ID=Msa0060720-mRNA-1:cds;Parent=Msa0060720-mRNA-1
chr1_2 three_prime_UTR 18532731 18533269 18532731 ID=Msa0060720-mRNA-1:three_prime_utr;Parent=Msa0060720-mRNA-1
Gene Sequence

>Msa0060720

ATGATAACACTTAAAGATCTTTACACTGTCTTAACAGCAGTGGTTCCATTATATGTTGCTATGATCTTAGCCTACGGTTCGGTCCGTTGGTGGAAGATTTTCTCACCGGATCAATGTTCCGGTATAAACCGCTTCGTCGCGGTTTTCGCCGTACCTCTCCTTTCATTCCACTTCATCTCAACCAACAATCCATATCAAATGAACTTCAGATTCATAGCTGCAGACACACTTCAAAAAATCATCATGCTAGTAGCACTTTCATTATGGACATTGTTCACTAAAAATGGCAATTTAGAATGGATGATAACAATCTTTTCATTATCAACACTTCCTAACACTTTGGTTATGGGAATTCCTTTGTTAATTGCTATGTATGGTGATTATTCAGGTAGCTTAATGGTTCAAGTTGTGGTTCTTCAGTGTATCATTTGGTACACTCTTTTGCTTTTTCTTTTTGAGTACCGTGGTGCTAAGCTTTTAATCATGGAGCAGTTTCCAGAAACCGCGGCTTCCATTGTTTCCTTTAAGGTCGATTCGGATGTTATGTCGTTAGATGGAAGAGATTTTCTTGAAACTGATGCATCAGTTGGTGATGATGGGAAGTTACATGTTACTGTTAGGAAGTCTAACGCGTCGCGGAGGTCATTTATGATGAATACTCCGCGACCGTCAAATTTGACTGGAGCTGAGATTTATAGTCTCAGCTCCACCCCAAGAGGGTCTAATTTCAACCATCAGGAGTTTTACTCCATGATGGGTTATCAACCAAGACATTCCAATTTTGGGGCTAATGATTTGTATTCTGTCCAGTCTTCTTCTAGAGGACCAACTCCTAGACCTTCAAATTTCGAAGAAAATGGTGCAAGTTCTCCTAGATTCGGGTTTTATCCGGCAGCGCAAACTGTGCCTAATTCGTATCCGGTGCCAAACCCGGAATTCTCCTCTACTACTAAACCTGTGAAGAATCAGAATCAAAATTTGATGCCGCAACAACCGCAGGTTCAATTGCAGACAAAAGGTTCTCAGGATAAAGAGTTGCATATGTTTGTGTGGAGCTCAAGTGCTTCACCGGTTTCGGAAAGTGCTGGCCTCAATGTCTTCCGAAATTCGGAACAATCCGAAGAGGGTGCTAAGGAGATCAGGATGGTGGTGGCTGATGAACATAATCAAAATGGTGAAACCAATAACAAAGGTGGTCAAGAAAAGGAAATTGGTGGGGAAGAGGACTTCAAGTTCAATGGGGTGAAGGTAGGAGAACAAGGAGAAGGACCCAATGGACCTAACAAGTTGGGCTCGAATTCAACGCCGGAGCTCCACCCTAAAGCCACCGGAGTCGCGGATTCAAGTGTCGGAAAACTCATGCCTCCGGCGAGCGTCATGACACGTCTCATACTCATTATGGTTTGGAGGAAACTTATCCGTAATCCAAACACCTATTCAAGTCTCATTGGTCTTATTTGGTCCCTTGTTGCCTTTAGGTGGGATGTTCATATGCCTAAAATAATAGAGAAATCAATTTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTTAGCTTAGGTCTGTTTATGGCTCTTCAACCCAAGATCATTGCATGTGGGAATTCTGTTGCTTCATTTGCCATGGCTATAAGATTCCTTACTGGTCCAGCAGTTATGGCAGCAGCTTCTATCGCCGTTGGCCTCCGTGGGACCCTCCTACATGTAGCTATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCAAAAGAGTACAATGTCCATCCAGCCATTCTTAGTACAGCGGTTATATTTGGTATGTTAATAGCCCTTCCAATTACTCTACTCTACTACATTCTCCTTGGTTTGTAA
Protein sequence

>Msa0060720

MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLVALSLWTLFTKNGNLEWMITIFSLSTLPNTLVMGIPLLIAMYGDYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVMSLDGRDFLETDASVGDDGKLHVTVRKSNASRRSFMMNTPRPSNLTGAEIYSLSSTPRGSNFNHQEFYSMMGYQPRHSNFGANDLYSVQSSSRGPTPRPSNFEENGASSPRFGFYPAAQTVPNSYPVPNPEFSSTTKPVKNQNQNLMPQQPQVQLQTKGSQDKELHMFVWSSSASPVSESAGLNVFRNSEQSEEGAKEIRMVVADEHNQNGETNNKGGQEKEIGGEEDFKFNGVKVGEQGEGPNGPNKLGSNSTPELHPKATGVADSSVGKLMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVAFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL*