AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0585770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0585770 MtrunA17_Chr4g0001421 96.939 294 8 1 1 294 1 293 0.0 575
Msa0585770 MtrunA17_Chr2g0333871 77.627 295 60 3 1 294 1 290 8.42e-158 441
Msa0585770 MtrunA17_Chr1g0210741 62.264 212 80 0 83 294 69 280 2.49e-96 285
Msa0585770 MtrunA17_Chr7g0224571 25.373 201 117 5 88 281 15 189 9.11e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0585770 AT1G16880.1 74.016 254 64 2 41 294 39 290 2.24e-133 380
Msa0585770 AT5G04740.1 62.673 217 81 0 78 294 85 301 3.27e-100 296
Msa0585770 AT1G16880.2 69.753 162 39 4 41 198 39 194 7.22e-71 218
Msa0585770 AT5G04740.2 59.664 119 48 0 176 294 82 200 1.00e-48 161
Msa0585770 AT3G01990.8 25.871 201 117 5 88 281 16 191 1.33e-11 64.3
Msa0585770 AT3G01990.3 25.871 201 117 5 88 281 30 205 1.35e-11 64.7
Msa0585770 AT3G01990.2 25.871 201 117 5 88 281 30 205 1.53e-11 64.7
Msa0585770 AT3G01990.9 25.871 201 117 5 88 281 16 191 1.53e-11 64.3
Msa0585770 AT3G01990.4 25.871 201 117 5 88 281 30 205 1.63e-11 64.3
Msa0585770 AT3G01990.10 25.871 201 117 5 88 281 16 191 1.91e-11 64.7
Msa0585770 AT3G01990.1 25.871 201 117 5 88 281 16 191 1.91e-11 64.7
Msa0585770 AT3G01990.11 25.871 201 117 5 88 281 16 191 1.96e-11 64.7
Msa0585770 AT3G01990.7 25.871 201 117 5 88 281 30 205 2.10e-11 64.3
Msa0585770 AT3G01990.5 25.871 201 117 5 88 281 30 205 2.10e-11 64.3
Msa0585770 AT3G01990.6 25.871 201 117 5 88 281 30 205 2.20e-11 64.3

Find 80 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATAAAATACTGTATTTA+TGG 0.151469 4_2:+6828549 Msa0585770:three_prime_UTR
TTTGTCAGGTTGTTGTCTTC+TGG 0.190236 4_2:+6825044 Msa0585770:intron
CTTTAAATGCTGCTGATATT+TGG 0.198365 4_2:+6828473 Msa0585770:three_prime_UTR
TGATAATAGTTTGAGAGTTT+TGG 0.215649 4_2:+6823982 Msa0585770:CDS
AGATTCATCACCTGCTCTTT+TGG 0.222017 4_2:-6826555 None:intergenic
TCTTGGTCAATTATGACTAT+TGG 0.255614 4_2:-6825291 None:intergenic
ATGTCAAATTTGTAAGAATT+AGG 0.273115 4_2:-6823828 None:intergenic
AATCATAAAACTGAATTAAC+AGG 0.273586 4_2:+6828396 Msa0585770:three_prime_UTR
TTAGCAATGGGAGCAGCTTT+TGG 0.275092 4_2:+6826522 Msa0585770:CDS
CTTGGTCAATTATGACTATT+GGG 0.278108 4_2:-6825290 None:intergenic
ATTGACATTGCTGTTGAATC+TGG 0.326851 4_2:+6827183 Msa0585770:CDS
GTTTGCATTCATTGTTTCAT+TGG 0.328185 4_2:+6828340 Msa0585770:three_prime_UTR
GAGGAGAAATGAAGAATAAC+TGG 0.343325 4_2:+6828363 Msa0585770:three_prime_UTR
TTTGCATTCATTGTTTCATT+GGG 0.396621 4_2:+6828341 Msa0585770:three_prime_UTR
TGTTTGAACCTAGGGGCTCT+TGG 0.406397 4_2:+6827687 Msa0585770:intron
ATCTCCACCACAGTTGCATC+TGG 0.413372 4_2:-6825321 None:intergenic
CTTAGGCCTCAATGTTGTTA+AGG 0.415434 4_2:+6825482 Msa0585770:CDS
GTTACTTTCTTCACAAAAGA+AGG 0.417045 4_2:+6824071 Msa0585770:CDS
GCTATGAGTGCTTTGAGACT+TGG 0.418351 4_2:+6823938 Msa0585770:CDS
AGTACCTGCACATCAGTAAC+AGG 0.440436 4_2:-6825095 None:intergenic
GAGGGCATGAATGAAAGTTT+TGG 0.442821 4_2:+6828573 Msa0585770:three_prime_UTR
AAACTGGATTCCTCAGTTGC+CGG 0.443051 4_2:-6828233 None:intergenic
GGAAGATCCAGAGTTGTTAG+AGG 0.470609 4_2:+6826327 Msa0585770:CDS
AGATTAAAGTTACCTGCTGC+AGG 0.475170 4_2:-6827759 None:intergenic
TGGAGATAACTTTCGGTGAT+CGG 0.475265 4_2:+6825337 Msa0585770:CDS
CGAATTGCCTCTAACAACTC+TGG 0.479030 4_2:-6826334 None:intergenic
GCTTCATTAACTCTAGGACT+TGG 0.480271 4_2:-6828622 None:intergenic
CGAATGCATTACCTTCGATC+TGG 0.482009 4_2:-6826943 None:intergenic
AATCAGCAAGCCCCTGCAGC+AGG 0.483771 4_2:+6827747 Msa0585770:CDS
CTCTCTGCTTCATTAACTCT+AGG 0.486414 4_2:-6828628 None:intergenic
GTGGAGACAGCTGATCGGCC+TGG 0.489025 4_2:+6827126 Msa0585770:CDS
AATAAAGTAAAATAAGAGAC+AGG 0.493335 4_2:-6823709 None:intergenic
TTCATATGAATGAAACAAAA+CGG 0.504007 4_2:-6823793 None:intergenic
ATAACTTTCGGTGATCGGCT+TGG 0.510246 4_2:+6825342 Msa0585770:CDS
TCAAGTTCTCAGTTAGCAAT+GGG 0.515912 4_2:+6826510 Msa0585770:CDS
CAGTGATACTGGCCGAAAAG+TGG 0.519005 4_2:+6826306 Msa0585770:intron
GGATATCAGGGTGGAAATCA+AGG 0.522473 4_2:+6825246 Msa0585770:intron
GAGATATTTCTTGAGGCGTC+CGG 0.523812 4_2:+6828214 Msa0585770:CDS
AAGTTTCATGTTAGCTACAA+AGG 0.527152 4_2:+6827718 Msa0585770:CDS
CACATAAACATATCCGATGA+TGG 0.529758 4_2:+6826919 Msa0585770:CDS
GCATTCATTGTTTCATTGGG+AGG 0.530901 4_2:+6828344 Msa0585770:three_prime_UTR
AGCACCTGTTACTGATGTGC+AGG 0.531571 4_2:+6825091 Msa0585770:CDS
AATCTCCAGTTATTGAAAAG+TGG 0.534195 4_2:-6828599 None:intergenic
TTGCATCTGGATCCAAGTCT+TGG 0.535486 4_2:-6825308 None:intergenic
AAAATACTGTATTTATGGTG+AGG 0.545823 4_2:+6828554 Msa0585770:three_prime_UTR
CCTTCGATCTGGACCATCAT+CGG 0.546047 4_2:-6826932 None:intergenic
ATCAAGTTCTCAGTTAGCAA+TGG 0.546569 4_2:+6826509 Msa0585770:CDS
AAATACTGTATTTATGGTGA+GGG 0.549877 4_2:+6828555 Msa0585770:three_prime_UTR
TTGTTTCATTCATATGAATG+TGG 0.556654 4_2:+6823798 Msa0585770:five_prime_UTR
ATTAAAGTTACCTGCTGCAG+GGG 0.562709 4_2:-6827757 None:intergenic
ACAAGATCGACAAGTAATCC+AGG 0.566828 4_2:-6827144 None:intergenic
CATTTGCCTTAACAACATTG+AGG 0.567718 4_2:-6825488 None:intergenic
AGTCATAATTGACCAAGACT+TGG 0.567923 4_2:+6825296 Msa0585770:CDS
GTAACAGGTGCTGCCGCTCG+AGG 0.568447 4_2:-6825080 None:intergenic
CAAGAAATATCTCAAGCTGT+TGG 0.569442 4_2:-6828204 None:intergenic
AGTATAACACCACCATGGAT+TGG 0.571048 4_2:+6828312 Msa0585770:three_prime_UTR
CTTGAGGCGTCCGGCAACTG+AGG 0.581879 4_2:+6828223 Msa0585770:CDS
TAACAGGTGCTGCCGCTCGA+GGG 0.586405 4_2:-6825079 None:intergenic
AATTGTCATTCAGGTTGATG+TGG 0.589579 4_2:+6826885 Msa0585770:intron
GATTAAAGTTACCTGCTGCA+GGG 0.589784 4_2:-6827758 None:intergenic
ACTTCTACCTCCAAAAGAGC+AGG 0.595122 4_2:+6826545 Msa0585770:CDS
CCGATGATGGTCCAGATCGA+AGG 0.598336 4_2:+6826932 Msa0585770:CDS
TGCAAACATTCACCAATCCA+TGG 0.598744 4_2:-6828324 None:intergenic
AGTAAAATAAGAGACAGGAA+TGG 0.599760 4_2:-6823704 None:intergenic
ACAGCTTGAGATATTTCTTG+AGG 0.602665 4_2:+6828207 Msa0585770:CDS
TCAATTATGACTATTGGGGT+CGG 0.614778 4_2:-6825285 None:intergenic
TATGACTATTGGGGTCGGAA+CGG 0.615998 4_2:-6825280 None:intergenic
CTCCAGTTATTGAAAAGTGG+TGG 0.630012 4_2:-6828596 None:intergenic
ACTGTGGTGGAGATAACTTT+CGG 0.631847 4_2:+6825330 Msa0585770:CDS
TCTATGTGGAGACAGCTGAT+CGG 0.632715 4_2:+6827121 Msa0585770:CDS
ATCATAAAACTGAATTAACA+GGG 0.638526 4_2:+6828397 Msa0585770:three_prime_UTR
TTGGTCAATTATGACTATTG+GGG 0.653500 4_2:-6825289 None:intergenic
TTTGGAGTATAACACCACCA+TGG 0.661005 4_2:+6828307 Msa0585770:three_prime_UTR
CTTGGATCCAGATGCAACTG+TGG 0.661276 4_2:+6825314 Msa0585770:CDS
AACTACTATTATCCCTCGAG+CGG 0.661528 4_2:+6825067 Msa0585770:CDS
ATGAGTGCATTAAAAGACTT+AGG 0.662772 4_2:+6825465 Msa0585770:CDS
TAATCTGATTCAGTATCACC+CGG 0.667172 4_2:+6826372 Msa0585770:CDS
GGATCCAGATGCAACTGTGG+TGG 0.679796 4_2:+6825317 Msa0585770:CDS
ATCTGGAGAATTTGACACTG+AGG 0.685475 4_2:+6827200 Msa0585770:CDS
AAACATTCACCAATCCATGG+TGG 0.770447 4_2:-6828321 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATATATTCAAAAGT+GGG - chr4_2:6824691-6824710 None:intergenic 10.0%
!! AAAAAATATATATTCAAAAG+TGG - chr4_2:6824692-6824711 None:intergenic 10.0%
!! AAAATAAAATACTGTATTTA+TGG + chr4_2:6828549-6828568 Msa0585770:three_prime_UTR 10.0%
!!! ATCATTTTGAACTAAAAAAA+TGG + chr4_2:6823910-6823929 Msa0585770:exon 15.0%
!!! TTAAATCTTGAATTATTTTG+AGG - chr4_2:6824506-6824525 None:intergenic 15.0%
!!! ATTTTTTTACAAAATTGTAG+TGG + chr4_2:6824705-6824724 Msa0585770:intron 15.0%
!! ATTAATTAAGTTAGTAGATT+AGG + chr4_2:6824872-6824891 Msa0585770:intron 15.0%
!!! TTATTTTTGTTTCTTTTATG+TGG + chr4_2:6825225-6825244 Msa0585770:intron 15.0%
!!! TAAGCTATTTCTATAATAAA+AGG + chr4_2:6825885-6825904 Msa0585770:intron 15.0%
!!! AAACAATTTGACTTTTTTTT+TGG - chr4_2:6825934-6825953 None:intergenic 15.0%
!!! TTCTGTAATGTATATTTTAT+TGG - chr4_2:6826703-6826722 None:intergenic 15.0%
!!! ATCTTGATTTTTTATCATTT+AGG - chr4_2:6828048-6828067 None:intergenic 15.0%
!! AATAAAGTAAAATAAGAGAC+AGG - chr4_2:6823712-6823731 None:intergenic 20.0%
!! TTCATATGAATGAAACAAAA+CGG - chr4_2:6823796-6823815 None:intergenic 20.0%
!! ATGTCAAATTTGTAAGAATT+AGG - chr4_2:6823831-6823850 None:intergenic 20.0%
!! ATAAGATGATTTGATTATGT+TGG + chr4_2:6824125-6824144 Msa0585770:intron 20.0%
!! TCATAAATCATATCTATGAA+TGG - chr4_2:6824284-6824303 None:intergenic 20.0%
!! TGTATTGCTTATGTTAATTA+TGG + chr4_2:6824763-6824782 Msa0585770:intron 20.0%
!! TTGAATTTCTAATACTGTTT+AGG - chr4_2:6826162-6826181 None:intergenic 20.0%
!! TTCTGTAAATTGAAAAGATA+AGG + chr4_2:6826640-6826659 Msa0585770:intron 20.0%
!! TCTGTAAATTGAAAAGATAA+GGG + chr4_2:6826641-6826660 Msa0585770:intron 20.0%
!! TGTTAAAGTCATGATATATA+AGG + chr4_2:6827018-6827037 Msa0585770:intron 20.0%
!! ATATGTTTGGTAAATTGTAA+TGG - chr4_2:6828025-6828044 None:intergenic 20.0%
!!! TTTATCATTTAGGATATGTT+TGG - chr4_2:6828038-6828057 None:intergenic 20.0%
!!! CATGACATTATATTTTCTTT+TGG + chr4_2:6828289-6828308 Msa0585770:three_prime_UTR 20.0%
!! AATCATAAAACTGAATTAAC+AGG + chr4_2:6828396-6828415 Msa0585770:three_prime_UTR 20.0%
!! ATCATAAAACTGAATTAACA+GGG + chr4_2:6828397-6828416 Msa0585770:three_prime_UTR 20.0%
! TTGTTTCATTCATATGAATG+TGG + chr4_2:6823798-6823817 Msa0585770:five_prime_UTR 25.0%
!!! AAGTTAGGATTTTGAGAAAT+GGG - chr4_2:6823867-6823886 None:intergenic 25.0%
!!! AAAGTTAGGATTTTGAGAAA+TGG - chr4_2:6823868-6823887 None:intergenic 25.0%
! CAAAGAAAAGAGAAAAAGTT+AGG - chr4_2:6823882-6823901 None:intergenic 25.0%
! TTGAACTAAAAAAATGGCTA+TGG + chr4_2:6823916-6823935 Msa0585770:exon 25.0%
!! TGATAATAGTTTGAGAGTTT+TGG + chr4_2:6823982-6824001 Msa0585770:CDS 25.0%
!!! AACAAGAAGCATTCAAAAAA+GGG - chr4_2:6824027-6824046 None:intergenic 25.0%
!! TTAGAATTTGAGCTTTTAGT+TGG + chr4_2:6824181-6824200 Msa0585770:intron 25.0%
! AAAATAGTTCTTCTGATTCA+CGG - chr4_2:6824361-6824380 None:intergenic 25.0%
! TATTCAAAAGTGGGTATAAT+TGG - chr4_2:6824682-6824701 None:intergenic 25.0%
! GGAACTCATTTACTTATATT+TGG + chr4_2:6824726-6824745 Msa0585770:intron 25.0%
! TTCTTCATGAAAATATGACA+AGG - chr4_2:6824826-6824845 None:intergenic 25.0%
! ATTAAGTTAGTAGATTAGGT+TGG + chr4_2:6824876-6824895 Msa0585770:intron 25.0%
!! AATAGTAAACGTTTGAAACT+TGG + chr4_2:6824942-6824961 Msa0585770:intron 25.0%
!! ATAGTAAACGTTTGAAACTT+GGG + chr4_2:6824943-6824962 Msa0585770:intron 25.0%
! ATACAATTAACACACAGAAA+TGG - chr4_2:6825010-6825029 None:intergenic 25.0%
!! TTTCTTTTATGTGGATATCA+GGG + chr4_2:6825234-6825253 Msa0585770:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr4_2:6825835-6825854 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr4_2:6825836-6825855 None:intergenic 25.0%
!! ATATCATAAGTTGTTTCCAT+TGG + chr4_2:6825998-6826017 Msa0585770:intron 25.0%
! TCAAATAAGTCAATCCAAAT+AGG + chr4_2:6826063-6826082 Msa0585770:intron 25.0%
! ATTTCTAATACTGTTTAGGT+AGG - chr4_2:6826158-6826177 None:intergenic 25.0%
!! CAAGATATTTGTTGCTTAAA+AGG - chr4_2:6826228-6826247 None:intergenic 25.0%
!! CTTTTAAGCAACAAATATCT+TGG + chr4_2:6826226-6826245 Msa0585770:intron 25.0%
!! AATTTTCAAATCGATGATTC+AGG + chr4_2:6826485-6826504 Msa0585770:intron 25.0%
! TTATTGGTGAAAAATGAAAC+AGG - chr4_2:6826687-6826706 None:intergenic 25.0%
! ATACATTACAGAAGACATTA+TGG + chr4_2:6826710-6826729 Msa0585770:intron 25.0%
! TTCTTTCTATTTGTGATAGA+GGG - chr4_2:6826853-6826872 None:intergenic 25.0%
! TTTCTTTCTATTTGTGATAG+AGG - chr4_2:6826854-6826873 None:intergenic 25.0%
! ATACTCATGCTTTCTAATTT+CGG + chr4_2:6827051-6827070 Msa0585770:intron 25.0%
!!! ATTTTGTAGTTTGTTCTATG+TGG + chr4_2:6827107-6827126 Msa0585770:intron 25.0%
!!! GATACATTCATTTTGAGTAA+TGG - chr4_2:6827292-6827311 None:intergenic 25.0%
! TCCTACTATTCAATGAATTA+GGG - chr4_2:6827541-6827560 None:intergenic 25.0%
! TTCCTACTATTCAATGAATT+AGG - chr4_2:6827542-6827561 None:intergenic 25.0%
! GATTGTTAGAATAGAAAATC+TGG - chr4_2:6827603-6827622 None:intergenic 25.0%
! TGAGCTTCAAAAAAAAAAGA+AGG + chr4_2:6827634-6827653 Msa0585770:intron 25.0%
! GAGCTTCAAAAAAAAAAGAA+GGG + chr4_2:6827635-6827654 Msa0585770:intron 25.0%
! AGCTTCAAAAAAAAAAGAAG+GGG + chr4_2:6827636-6827655 Msa0585770:intron 25.0%
! ATGATTAAAGTAGATTTGTC+TGG + chr4_2:6827886-6827905 Msa0585770:intron 25.0%
! CTATAAACTATACGCTATAA+GGG - chr4_2:6827979-6827998 None:intergenic 25.0%
! TTTGCATTCATTGTTTCATT+GGG + chr4_2:6828341-6828360 Msa0585770:three_prime_UTR 25.0%
! AAAATACTGTATTTATGGTG+AGG + chr4_2:6828554-6828573 Msa0585770:three_prime_UTR 25.0%
! AAATACTGTATTTATGGTGA+GGG + chr4_2:6828555-6828574 Msa0585770:three_prime_UTR 25.0%
AGTAAAATAAGAGACAGGAA+TGG - chr4_2:6823707-6823726 None:intergenic 30.0%
!!! AAACGGTTGTTTCTGTTTTT+TGG - chr4_2:6823779-6823798 None:intergenic 30.0%
AAAAAAGGGACACAGAAAAT+GGG - chr4_2:6824013-6824032 None:intergenic 30.0%
!! GAACAAGAAGCATTCAAAAA+AGG - chr4_2:6824028-6824047 None:intergenic 30.0%
! TTTTTGAATGCTTCTTGTTC+TGG + chr4_2:6824028-6824047 Msa0585770:CDS 30.0%
! TTTTGAATGCTTCTTGTTCT+GGG + chr4_2:6824029-6824048 Msa0585770:CDS 30.0%
! CTTTTGTGAAGAAAGTAACA+TGG - chr4_2:6824070-6824089 None:intergenic 30.0%
! GTTACTTTCTTCACAAAAGA+AGG + chr4_2:6824071-6824090 Msa0585770:CDS 30.0%
!! GGTAAATTAGCTTTGATCAT+TGG + chr4_2:6824092-6824111 Msa0585770:intron 30.0%
!! CTTTGATCATTGGTTGATTT+TGG + chr4_2:6824102-6824121 Msa0585770:intron 30.0%
ACAACGTCATAATACATACT+CGG - chr4_2:6824307-6824326 None:intergenic 30.0%
! GAGGTGTATTTTCGAAATAT+CGG - chr4_2:6824487-6824506 None:intergenic 30.0%
GAAAAGATTCATGTGCAAAA+TGG + chr4_2:6824542-6824561 Msa0585770:intron 30.0%
AACATAAGCAATACAAGCAA+AGG - chr4_2:6824758-6824777 None:intergenic 30.0%
CAGAAATGGACATATTACTT+AGG - chr4_2:6824996-6825015 None:intergenic 30.0%
GCATTATAGAGATGAACTAT+GGG - chr4_2:6825173-6825192 None:intergenic 30.0%
AGCATTATAGAGATGAACTA+TGG - chr4_2:6825174-6825193 None:intergenic 30.0%
! TTTTTACCGATCAACAAACA+CGG - chr4_2:6825203-6825222 None:intergenic 30.0%
! GTTTCTTTTATGTGGATATC+AGG + chr4_2:6825233-6825252 Msa0585770:intron 30.0%
TTGGTCAATTATGACTATTG+GGG - chr4_2:6825292-6825311 None:intergenic 30.0%
CTTGGTCAATTATGACTATT+GGG - chr4_2:6825293-6825312 None:intergenic 30.0%
TCTTGGTCAATTATGACTAT+TGG - chr4_2:6825294-6825313 None:intergenic 30.0%
!!! TATCTGTTGCTTTTTCTTAG+AGG + chr4_2:6825420-6825439 Msa0585770:intron 30.0%
!!! ATCTGTTGCTTTTTCTTAGA+GGG + chr4_2:6825421-6825440 Msa0585770:intron 30.0%
ATGAGTGCATTAAAAGACTT+AGG + chr4_2:6825465-6825484 Msa0585770:CDS 30.0%
! TGTTAAGGCAAATGTTTTTC+TGG + chr4_2:6825497-6825516 Msa0585770:CDS 30.0%
! AATGTTTTTCTGGATTCTTC+TGG + chr4_2:6825507-6825526 Msa0585770:CDS 30.0%
AATATCTGAGAGTTTCAGTT+GGG - chr4_2:6825729-6825748 None:intergenic 30.0%
!! TATTTTATTTACTCCACCAC+TGG + chr4_2:6825752-6825771 Msa0585770:intron 30.0%
TGATGAATCTCTTTACTTCT+CGG + chr4_2:6826568-6826587 Msa0585770:intron 30.0%
! TGTGAATTTTTCATTCTCTC+TGG + chr4_2:6826605-6826624 Msa0585770:intron 30.0%
TTCATTACCAATTGTCATTC+AGG + chr4_2:6826876-6826895 Msa0585770:intron 30.0%
GAATGTATCAATGTTGAGTA+TGG + chr4_2:6827303-6827322 Msa0585770:intron 30.0%
ACCCTAATTCATTGAATAGT+AGG + chr4_2:6827537-6827556 Msa0585770:intron 30.0%
!!! ACAAAGCTTTTTCATCAGAT+TGG - chr4_2:6827670-6827689 None:intergenic 30.0%
!! AAAAAGCTTTGTTTGAACCT+AGG + chr4_2:6827678-6827697 Msa0585770:intron 30.0%
!! AAAAGCTTTGTTTGAACCTA+GGG + chr4_2:6827679-6827698 Msa0585770:intron 30.0%
AAGTTTCATGTTAGCTACAA+AGG + chr4_2:6827718-6827737 Msa0585770:CDS 30.0%
TTTAATCGTCAAGTACTCTT+TGG + chr4_2:6827812-6827831 Msa0585770:intron 30.0%
TGTTATTCGTTGTAAGCTAA+TGG - chr4_2:6827848-6827867 None:intergenic 30.0%
AAGTAGATTTGTCTGGTAAA+CGG + chr4_2:6827893-6827912 Msa0585770:intron 30.0%
GCTATAAACTATACGCTATA+AGG - chr4_2:6827980-6827999 None:intergenic 30.0%
AACTCATAGTACATTGAAGT+AGG + chr4_2:6828076-6828095 Msa0585770:intron 30.0%
GTTTGCATTCATTGTTTCAT+TGG + chr4_2:6828340-6828359 Msa0585770:three_prime_UTR 30.0%
CTTTAAATGCTGCTGATATT+TGG + chr4_2:6828473-6828492 Msa0585770:three_prime_UTR 30.0%
AATCTCCAGTTATTGAAAAG+TGG - chr4_2:6828602-6828621 None:intergenic 30.0%
CAAAAAAGGGACACAGAAAA+TGG - chr4_2:6824014-6824033 None:intergenic 35.0%
AATGGATACGCACTATCAAT+TGG + chr4_2:6824560-6824579 Msa0585770:intron 35.0%
AGCACGATTACCAATATCTT+CGG - chr4_2:6824601-6824620 None:intergenic 35.0%
CAAACAAGTCATATACCACT+GGG - chr4_2:6824646-6824665 None:intergenic 35.0%
ACAAACAAGTCATATACCAC+TGG - chr4_2:6824647-6824666 None:intergenic 35.0%
TAAGCAATACAAGCAAAGGA+AGG - chr4_2:6824754-6824773 None:intergenic 35.0%
TTACTGCTCTTTCTTTCGTT+TGG + chr4_2:6824916-6824935 Msa0585770:intron 35.0%
AAGACAACAACCTGACAAAA+GGG - chr4_2:6825043-6825062 None:intergenic 35.0%
GCAAATAACGACAATCACAT+AGG - chr4_2:6825133-6825152 None:intergenic 35.0%
TCAATTATGACTATTGGGGT+CGG - chr4_2:6825288-6825307 None:intergenic 35.0%
AGTCATAATTGACCAAGACT+TGG + chr4_2:6825296-6825315 Msa0585770:CDS 35.0%
CATTTGCCTTAACAACATTG+AGG - chr4_2:6825491-6825510 None:intergenic 35.0%
! TAACACTTACGCTTTTGTGA+TGG - chr4_2:6825550-6825569 None:intergenic 35.0%
GAATATCTGAGAGTTTCAGT+TGG - chr4_2:6825730-6825749 None:intergenic 35.0%
TTAGAGTAGATGGTGCAATT+AGG - chr4_2:6825808-6825827 None:intergenic 35.0%
TATCTATAAGTTCTCCACGA+TGG - chr4_2:6825979-6825998 None:intergenic 35.0%
! TGTTTAGCTCGCATAAAGAA+AGG - chr4_2:6826089-6826108 None:intergenic 35.0%
AGCAACAAATATCTTGGATG+AGG + chr4_2:6826232-6826251 Msa0585770:intron 35.0%
TCGCTTCTTTAGTAATTCCT+TGG + chr4_2:6826262-6826281 Msa0585770:intron 35.0%
CGCTTCTTTAGTAATTCCTT+GGG + chr4_2:6826263-6826282 Msa0585770:intron 35.0%
TAATCTGATTCAGTATCACC+CGG + chr4_2:6826372-6826391 Msa0585770:CDS 35.0%
TGGTTGTAATATATGCCAAC+AGG + chr4_2:6826437-6826456 Msa0585770:intron 35.0%
ATCAAGTTCTCAGTTAGCAA+TGG + chr4_2:6826509-6826528 Msa0585770:CDS 35.0%
TCAAGTTCTCAGTTAGCAAT+GGG + chr4_2:6826510-6826529 Msa0585770:CDS 35.0%
TTTCTATTTGTGATAGAGGG+AGG - chr4_2:6826850-6826869 None:intergenic 35.0%
ACATCAACCTGAATGACAAT+TGG - chr4_2:6826886-6826905 None:intergenic 35.0%
!! AATTGTCATTCAGGTTGATG+TGG + chr4_2:6826885-6826904 Msa0585770:intron 35.0%
CACATAAACATATCCGATGA+TGG + chr4_2:6826919-6826938 Msa0585770:CDS 35.0%
! ATTGACATTGCTGTTGAATC+TGG + chr4_2:6827183-6827202 Msa0585770:CDS 35.0%
TTTGTTGGGTTACAACTATG+AGG + chr4_2:6827411-6827430 Msa0585770:intron 35.0%
TTGTTGGGTTACAACTATGA+GGG + chr4_2:6827412-6827431 Msa0585770:intron 35.0%
!! AAAGCTTTGTTTGAACCTAG+GGG + chr4_2:6827680-6827699 Msa0585770:intron 35.0%
ATTTGTCTGGTAAACGGTAA+TGG + chr4_2:6827899-6827918 Msa0585770:intron 35.0%
CTTCATATTTACCATGTTGC+AGG + chr4_2:6828175-6828194 Msa0585770:intron 35.0%
CAAGAAATATCTCAAGCTGT+TGG - chr4_2:6828207-6828226 None:intergenic 35.0%
ACAGCTTGAGATATTTCTTG+AGG + chr4_2:6828207-6828226 Msa0585770:CDS 35.0%
! TGAGGAATCCAGTTTTTGAA+GGG + chr4_2:6828241-6828260 Msa0585770:exon 35.0%
GAGGAGAAATGAAGAATAAC+TGG + chr4_2:6828363-6828382 Msa0585770:three_prime_UTR 35.0%
CTCGTATGTACCGAAGATAT+TGG + chr4_2:6824588-6824607 Msa0585770:intron 40.0%
! GTACTATGTACCCTTTTGTC+AGG + chr4_2:6825030-6825049 Msa0585770:intron 40.0%
GAAGACAACAACCTGACAAA+AGG - chr4_2:6825044-6825063 None:intergenic 40.0%
! TTTGTCAGGTTGTTGTCTTC+TGG + chr4_2:6825044-6825063 Msa0585770:intron 40.0%
AACTACTATTATCCCTCGAG+CGG + chr4_2:6825067-6825086 Msa0585770:CDS 40.0%
TAGAGATGAACTATGGGTCT+TGG - chr4_2:6825167-6825186 None:intergenic 40.0%
! CTTTTATGTGGATATCAGGG+TGG + chr4_2:6825237-6825256 Msa0585770:intron 40.0%
! ACTGTGGTGGAGATAACTTT+CGG + chr4_2:6825330-6825349 Msa0585770:CDS 40.0%
TGGAGATAACTTTCGGTGAT+CGG + chr4_2:6825337-6825356 Msa0585770:CDS 40.0%
CTTAGGCCTCAATGTTGTTA+AGG + chr4_2:6825482-6825501 Msa0585770:CDS 40.0%
ACCGAGTATCTCTTCAGTTT+AGG + chr4_2:6825691-6825710 Msa0585770:intron 40.0%
GCCTAAACTGAAGAGATACT+CGG - chr4_2:6825695-6825714 None:intergenic 40.0%
!!! ACAGGGCTTTTTAGAGTAGA+TGG - chr4_2:6825818-6825837 None:intergenic 40.0%
! CTACTCTAAAAAGCCCTGTT+TGG + chr4_2:6825819-6825838 Msa0585770:intron 40.0%
CGCATAAAGAAAGGCCTATT+TGG - chr4_2:6826080-6826099 None:intergenic 40.0%
!! TGAAACTTGTTGCGCAACTT+AGG + chr4_2:6826192-6826211 Msa0585770:intron 40.0%
TAGTAATTCCTTGGGTATGC+TGG + chr4_2:6826271-6826290 Msa0585770:intron 40.0%
!! ACTCTGGATCTTCCACTTTT+CGG - chr4_2:6826321-6826340 None:intergenic 40.0%
!! GATAGTTGGTAAAGCATACC+GGG - chr4_2:6826393-6826412 None:intergenic 40.0%
!! GGATAGTTGGTAAAGCATAC+CGG - chr4_2:6826394-6826413 None:intergenic 40.0%
CAATGAGAAAGGAGGATAGT+TGG - chr4_2:6826407-6826426 None:intergenic 40.0%
CAACTATCCTCCTTTCTCAT+TGG + chr4_2:6826405-6826424 Msa0585770:intron 40.0%
TATCCTCCTTTCTCATTGGA+GGG + chr4_2:6826409-6826428 Msa0585770:intron 40.0%
AAATCACCCTCCAATGAGAA+AGG - chr4_2:6826418-6826437 None:intergenic 40.0%
TTTCTCATTGGAGGGTGATT+TGG + chr4_2:6826417-6826436 Msa0585770:intron 40.0%
! AGATTCATCACCTGCTCTTT+TGG - chr4_2:6826558-6826577 None:intergenic 40.0%
ACAAGATCGACAAGTAATCC+AGG - chr4_2:6827147-6827166 None:intergenic 40.0%
ATCTGGAGAATTTGACACTG+AGG + chr4_2:6827200-6827219 Msa0585770:CDS 40.0%
! AAACCTTCTAAGTTCTGACG+TGG + chr4_2:6827266-6827285 Msa0585770:intron 40.0%
GCTCATAATCGCTGATAAGA+GGG + chr4_2:6827325-6827344 Msa0585770:intron 40.0%
GCGTGGCTTATTCATTTGTT+GGG + chr4_2:6827397-6827416 Msa0585770:intron 40.0%
TTACGGATAAGCTTGTGAAC+TGG + chr4_2:6827472-6827491 Msa0585770:intron 40.0%
ATTAAAGTTACCTGCTGCAG+GGG - chr4_2:6827760-6827779 None:intergenic 40.0%
GATTAAAGTTACCTGCTGCA+GGG - chr4_2:6827761-6827780 None:intergenic 40.0%
AGATTAAAGTTACCTGCTGC+AGG - chr4_2:6827762-6827781 None:intergenic 40.0%
GTACATTGAAGTAGGCAAGT+AGG + chr4_2:6828084-6828103 Msa0585770:intron 40.0%
! CTGAGGAATCCAGTTTTTGA+AGG + chr4_2:6828240-6828259 Msa0585770:CDS 40.0%
AAGAGATGCCCTTCAAAAAC+TGG - chr4_2:6828252-6828271 None:intergenic 40.0%
! TTTGGAGTATAACACCACCA+TGG + chr4_2:6828307-6828326 Msa0585770:three_prime_UTR 40.0%
AGTATAACACCACCATGGAT+TGG + chr4_2:6828312-6828331 Msa0585770:three_prime_UTR 40.0%
AAACATTCACCAATCCATGG+TGG - chr4_2:6828324-6828343 None:intergenic 40.0%
TGCAAACATTCACCAATCCA+TGG - chr4_2:6828327-6828346 None:intergenic 40.0%
GCATTCATTGTTTCATTGGG+AGG + chr4_2:6828344-6828363 Msa0585770:three_prime_UTR 40.0%
!! GAGGGCATGAATGAAAGTTT+TGG + chr4_2:6828573-6828592 Msa0585770:three_prime_UTR 40.0%
CTCCAGTTATTGAAAAGTGG+TGG - chr4_2:6828599-6828618 None:intergenic 40.0%
!! GCTTCATTAACTCTAGGACT+TGG - chr4_2:6828625-6828644 None:intergenic 40.0%
!! GCTATGAGTGCTTTGAGACT+TGG + chr4_2:6823938-6823957 Msa0585770:CDS 45.0%
AAGTCATATACCACTGGGTG+GGG - chr4_2:6824641-6824660 None:intergenic 45.0%
CAAGTCATATACCACTGGGT+GGG - chr4_2:6824642-6824661 None:intergenic 45.0%
ACAAGTCATATACCACTGGG+TGG - chr4_2:6824643-6824662 None:intergenic 45.0%
! TTTTCATGAAGAACGCCTGC+AGG + chr4_2:6824833-6824852 Msa0585770:intron 45.0%
AGTACCTGCACATCAGTAAC+AGG - chr4_2:6825098-6825117 None:intergenic 45.0%
GTTACTGATGTGCAGGTACT+CGG + chr4_2:6825098-6825117 Msa0585770:intron 45.0%
! TGTCGACCGTGTTTGTTGAT+CGG + chr4_2:6825194-6825213 Msa0585770:intron 45.0%
GGATATCAGGGTGGAAATCA+AGG + chr4_2:6825246-6825265 Msa0585770:intron 45.0%
TATGACTATTGGGGTCGGAA+CGG - chr4_2:6825283-6825302 None:intergenic 45.0%
TTGCATCTGGATCCAAGTCT+TGG - chr4_2:6825311-6825330 None:intergenic 45.0%
ATAACTTTCGGTGATCGGCT+TGG + chr4_2:6825342-6825361 Msa0585770:CDS 45.0%
TCTTCAGTTTAGGCCAGCAT+TGG + chr4_2:6825701-6825720 Msa0585770:intron 45.0%
TTTCAGTTGGGTTCCAATGC+TGG - chr4_2:6825717-6825736 None:intergenic 45.0%
AGCACAAGGAATGACTAGTG+CGG - chr4_2:6825779-6825798 None:intergenic 45.0%
! CAATTAGGAGCAAGAGCACA+AGG - chr4_2:6825793-6825812 None:intergenic 45.0%
!! GCTATTTTCATGAGCCATCG+TGG + chr4_2:6825962-6825981 Msa0585770:intron 45.0%
AGTCTGTTTCAGAGAGCCAA+TGG - chr4_2:6826017-6826036 None:intergenic 45.0%
TAATTCCTTGGGTATGCTGG+TGG + chr4_2:6826274-6826293 Msa0585770:intron 45.0%
! GGAGCTTTTTGCAGTGATAC+TGG + chr4_2:6826295-6826314 Msa0585770:intron 45.0%
GGAAGATCCAGAGTTGTTAG+AGG + chr4_2:6826327-6826346 Msa0585770:CDS 45.0%
CGAATTGCCTCTAACAACTC+TGG - chr4_2:6826337-6826356 None:intergenic 45.0%
CTATCCTCCTTTCTCATTGG+AGG + chr4_2:6826408-6826427 Msa0585770:intron 45.0%
GAGAAGTGAGAATTGCCTGT+TGG - chr4_2:6826455-6826474 None:intergenic 45.0%
! TTAGCAATGGGAGCAGCTTT+TGG + chr4_2:6826522-6826541 Msa0585770:CDS 45.0%
ACTTCTACCTCCAAAAGAGC+AGG + chr4_2:6826545-6826564 Msa0585770:CDS 45.0%
! TTCATCACCTGCTCTTTTGG+AGG - chr4_2:6826555-6826574 None:intergenic 45.0%
CGAATGCATTACCTTCGATC+TGG - chr4_2:6826946-6826965 None:intergenic 45.0%
TCTATGTGGAGACAGCTGAT+CGG + chr4_2:6827121-6827140 Msa0585770:CDS 45.0%
GGCTCATAATCGCTGATAAG+AGG + chr4_2:6827324-6827343 Msa0585770:intron 45.0%
!! TAATGAAAGCGCCTTCCGTT+TGG + chr4_2:6827374-6827393 Msa0585770:intron 45.0%
!! AATGAAAGCGCCTTCCGTTT+GGG + chr4_2:6827375-6827394 Msa0585770:intron 45.0%
ATGAATAAGCCACGCCCAAA+CGG - chr4_2:6827392-6827411 None:intergenic 45.0%
GGCGTGGCTTATTCATTTGT+TGG + chr4_2:6827396-6827415 Msa0585770:intron 45.0%
GGTTACAACTATGAGGGCTA+GGG + chr4_2:6827418-6827437 Msa0585770:intron 45.0%
GTTACAACTATGAGGGCTAG+GGG + chr4_2:6827419-6827438 Msa0585770:intron 45.0%
TTATCCGTAAACCGTAACGC+AGG - chr4_2:6827462-6827481 None:intergenic 45.0%
CACTAGATGCTTGCGCAATA+AGG - chr4_2:6828111-6828130 None:intergenic 45.0%
CTTATTGCGCAAGCATCTAG+TGG + chr4_2:6828109-6828128 Msa0585770:intron 45.0%
! GAGATATTTCTTGAGGCGTC+CGG + chr4_2:6828214-6828233 Msa0585770:CDS 45.0%
AAACTGGATTCCTCAGTTGC+CGG - chr4_2:6828236-6828255 None:intergenic 45.0%
!! GGCCACCACTTTTCAATAAC+TGG + chr4_2:6828594-6828613 Msa0585770:three_prime_UTR 45.0%
AGCACCTGTTACTGATGTGC+AGG + chr4_2:6825091-6825110 Msa0585770:CDS 50.0%
CTTGGATCCAGATGCAACTG+TGG + chr4_2:6825314-6825333 Msa0585770:CDS 50.0%
ATCTCCACCACAGTTGCATC+TGG - chr4_2:6825324-6825343 None:intergenic 50.0%
GCACAAGGAATGACTAGTGC+GGG - chr4_2:6825778-6825797 None:intergenic 50.0%
CAGTGATACTGGCCGAAAAG+TGG + chr4_2:6826306-6826325 Msa0585770:intron 50.0%
TCACCCTCCAATGAGAAAGG+AGG - chr4_2:6826415-6826434 None:intergenic 50.0%
CCTTCGATCTGGACCATCAT+CGG - chr4_2:6826935-6826954 None:intergenic 50.0%
TGGCCACGTCAGAACTTAGA+AGG - chr4_2:6827272-6827291 None:intergenic 50.0%
GGGTTACAACTATGAGGGCT+AGG + chr4_2:6827417-6827436 Msa0585770:intron 50.0%
TGTTTGAACCTAGGGGCTCT+TGG + chr4_2:6827687-6827706 Msa0585770:intron 50.0%
GTTGGCAAGAACCTGCAACA+TGG - chr4_2:6828189-6828208 None:intergenic 50.0%
CATATACCACTGGGTGGGGT+TGG - chr4_2:6824637-6824656 None:intergenic 55.0%
TGAAGAACGCCTGCAGGACA+CGG + chr4_2:6824839-6824858 Msa0585770:intron 55.0%
ACACCAAATCCGTGTCCTGC+AGG - chr4_2:6824851-6824870 None:intergenic 55.0%
GGATCCAGATGCAACTGTGG+TGG + chr4_2:6825317-6825336 Msa0585770:CDS 55.0%
AAGCTCCACCAGCATACCCA+AGG - chr4_2:6826282-6826301 None:intergenic 55.0%
! CCGATGATGGTCCAGATCGA+AGG + chr4_2:6826932-6826951 Msa0585770:CDS 55.0%
ATAAGCCACGCCCAAACGGA+AGG - chr4_2:6827388-6827407 None:intergenic 55.0%
AACTATGAGGGCTAGGGGTG+AGG + chr4_2:6827424-6827443 Msa0585770:intron 55.0%
ACTATGAGGGCTAGGGGTGA+GGG + chr4_2:6827425-6827444 Msa0585770:intron 55.0%
GCCACCTGCGTTACGGTTTA+CGG + chr4_2:6827455-6827474 Msa0585770:intron 55.0%
TCCGTAAACCGTAACGCAGG+TGG - chr4_2:6827459-6827478 None:intergenic 55.0%
TGCTTTAGCCAAGAGCCCCT+AGG - chr4_2:6827698-6827717 None:intergenic 55.0%
!! ACTGGGTGGGGTTGGCTACA+TGG - chr4_2:6824629-6824648 None:intergenic 60.0%
ATGTAGCCAACCCCACCCAG+TGG + chr4_2:6824628-6824647 Msa0585770:intron 60.0%
ACGCCTGCAGGACACGGATT+TGG + chr4_2:6824845-6824864 Msa0585770:intron 60.0%
! TAACAGGTGCTGCCGCTCGA+GGG - chr4_2:6825082-6825101 None:intergenic 60.0%
GAATGACTAGTGCGGGCCAG+TGG - chr4_2:6825771-6825790 None:intergenic 60.0%
CTATGAGGGCTAGGGGTGAG+GGG + chr4_2:6827426-6827445 Msa0585770:intron 60.0%
TATGAGGGCTAGGGGTGAGG+GGG + chr4_2:6827427-6827446 Msa0585770:intron 60.0%
AATCAGCAAGCCCCTGCAGC+AGG + chr4_2:6827747-6827766 Msa0585770:CDS 60.0%
! GTAACAGGTGCTGCCGCTCG+AGG - chr4_2:6825083-6825102 None:intergenic 65.0%
TGACTAGTGCGGGCCAGTGG+TGG - chr4_2:6825768-6825787 None:intergenic 65.0%
GTGGAGACAGCTGATCGGCC+TGG + chr4_2:6827126-6827145 Msa0585770:CDS 65.0%
AAGCGCCTTCCGTTTGGGCG+TGG + chr4_2:6827380-6827399 Msa0585770:intron 65.0%
ATGAGGGCTAGGGGTGAGGG+GGG + chr4_2:6827428-6827447 Msa0585770:intron 65.0%
GGGCTTCGCCACCTGCGTTA+CGG + chr4_2:6827448-6827467 Msa0585770:intron 65.0%
! CTTGAGGCGTCCGGCAACTG+AGG + chr4_2:6828223-6828242 Msa0585770:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 6823677 6828646 6823677 ID=Msa0585770;Name=Msa0585770
chr4_2 mRNA 6823677 6828646 6823677 ID=Msa0585770-mRNA-1;Parent=Msa0585770;Name=Msa0585770-mRNA-1;_AED=0.05;_eAED=0.05;_QI=252|1|1|1|1|1|10|387|294
chr4_2 exon 6823677 6824092 6823677 ID=Msa0585770-mRNA-1:exon:1667;Parent=Msa0585770-mRNA-1
chr4_2 exon 6825052 6825112 6825052 ID=Msa0585770-mRNA-1:exon:1668;Parent=Msa0585770-mRNA-1
chr4_2 exon 6825255 6825380 6825255 ID=Msa0585770-mRNA-1:exon:1669;Parent=Msa0585770-mRNA-1
chr4_2 exon 6825465 6825559 6825465 ID=Msa0585770-mRNA-1:exon:1670;Parent=Msa0585770-mRNA-1
chr4_2 exon 6826309 6826393 6826309 ID=Msa0585770-mRNA-1:exon:1671;Parent=Msa0585770-mRNA-1
chr4_2 exon 6826507 6826566 6826507 ID=Msa0585770-mRNA-1:exon:1672;Parent=Msa0585770-mRNA-1
chr4_2 exon 6826898 6826953 6826898 ID=Msa0585770-mRNA-1:exon:1673;Parent=Msa0585770-mRNA-1
chr4_2 exon 6827116 6827221 6827116 ID=Msa0585770-mRNA-1:exon:1674;Parent=Msa0585770-mRNA-1
chr4_2 exon 6827700 6827768 6827700 ID=Msa0585770-mRNA-1:exon:1675;Parent=Msa0585770-mRNA-1
chr4_2 exon 6828197 6828646 6828197 ID=Msa0585770-mRNA-1:exon:1676;Parent=Msa0585770-mRNA-1
chr4_2 five_prime_UTR 6823677 6823928 6823677 ID=Msa0585770-mRNA-1:five_prime_utr;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6823929 6824092 6823929 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6825052 6825112 6825052 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6825255 6825380 6825255 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6825465 6825559 6825465 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6826309 6826393 6826309 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6826507 6826566 6826507 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6826898 6826953 6826898 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6827116 6827221 6827116 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6827700 6827768 6827700 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 CDS 6828197 6828259 6828197 ID=Msa0585770-mRNA-1:cds;Parent=Msa0585770-mRNA-1
chr4_2 three_prime_UTR 6828260 6828646 6828260 ID=Msa0585770-mRNA-1:three_prime_utr;Parent=Msa0585770-mRNA-1
Gene Sequence

>Msa0585770

ATGGCTATGGCTATGAGTGCTTTGAGACTTGGATTTCACTTCAGTGCTGCTACTGATAATAGTTTGAGAGTTTTGGAAAAACCCATTTTCTGTGTCCCTTTTTTGAATGCTTCTTGTTCTGGGTTTGTTTCTACTAAGCCATGTTACTTTCTTCACAAAAGAAGGTTGTTGTCTTCTGGAACTACTATTATCCCTCGAGCGGCAGCACCTGTTACTGATGTGCAGGGTGGAAATCAAGGTGAGACTGATACCGTTCCGACCCCAATAGTCATAATTGACCAAGACTTGGATCCAGATGCAACTGTGGTGGAGATAACTTTCGGTGATCGGCTTGGAGCTCTTCTTGACACAATGAGTGCATTAAAAGACTTAGGCCTCAATGTTGTTAAGGCAAATGTTTTTCTGGATTCTTCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCCGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTGATTCAGTATCACCCGGAATCAAGTTCTCAGTTAGCAATGGGAGCAGCTTTTGGACTTCTACCTCCAAAAGAGCAGGTTGATGTGGACATTGCAACTCACATAAACATATCCGATGATGGTCCAGATCGAAGTTTGTTCTATGTGGAGACAGCTGATCGGCCTGGATTACTTGTCGATCTTGTAAAAAGTATTACTGACATTGACATTGCTGTTGAATCTGGAGAATTTGACACTGAGGGGCTCTTGGCTAAAGCAAAGTTTCATGTTAGCTACAAAGGCAAAGCAATCAGCAAGCCCCTGCAGCAGGTTCTTGCCAACAGCTTGAGATATTTCTTGAGGCGTCCGGCAACTGAGGAATCCAGTTTTTGA

Protein sequence

>Msa0585770

MAMAMSALRLGFHFSAATDNSLRVLEKPIFCVPFLNASCSGFVSTKPCYFLHKRRLLSSGTTIIPRAAAPVTDVQGGNQGETDTVPTPIVIIDQDLDPDATVVEITFGDRLGALLDTMSALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQVDVDIATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAISKPLQQVLANSLRYFLRRPATEESSF*