AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167340 MtrunA17_Chr7g0265761 99.308 289 2 0 1 289 1 289 0.0 582
Msa1167340 MtrunA17_Chr2g0320884 41.905 315 137 8 1 289 35 329 7.61e-46 157
Msa1167340 MtrunA17_Chr4g0027181 39.841 251 130 7 1 247 5 238 2.80e-33 122
Msa1167340 MtrunA17_Chr4g0027191 52.632 95 43 1 2 94 6 100 2.17e-26 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167340 AT5G03740.1 39.667 300 161 8 1 288 1 292 5.12e-47 159
Msa1167340 AT3G44750.2 55.319 94 41 1 1 94 1 93 1.79e-27 107
Msa1167340 AT3G44750.1 55.319 94 41 1 1 94 1 93 1.91e-27 107
Msa1167340 AT5G22650.2 36.054 294 152 9 1 269 1 283 6.40e-25 101
Msa1167340 AT5G22650.1 36.120 299 146 11 1 269 1 284 1.65e-23 97.8
Msa1167340 AT2G27840.4 42.708 96 51 3 1 94 1 94 4.73e-17 77.0
Msa1167340 AT2G27840.3 42.708 96 51 3 1 94 1 94 6.92e-17 77.8
Msa1167340 AT2G27840.1 42.708 96 51 3 1 94 1 94 2.21e-16 74.7

Find 89 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTGCAGTCATGGAGTTT+TGG 0.186768 7_4:+59786584 Msa1167340:exon
ATCTTGATCTTCTTTGGATC+TGG 0.192571 7_4:+59790826 Msa1167340:three_prime_UTR
GAAAATACAGTTGTTGATTT+AGG 0.205019 7_4:+59790857 Msa1167340:three_prime_UTR
GTGAGCATCTTGATCTTCTT+TGG 0.206390 7_4:+59790820 Msa1167340:three_prime_UTR
CGCTCCCATATTTCCAGTTA+TGG 0.260338 7_4:-59788331 None:intergenic
CTATCCCATAACTGGAAATA+TGG 0.264248 7_4:+59788326 Msa1167340:CDS
GTTATATGGTCATGTGTTAC+TGG 0.280175 7_4:+59790956 Msa1167340:three_prime_UTR
CTTTATATGACAGGCATGTT+TGG 0.291541 7_4:+59788163 Msa1167340:intron
TTTGGAGTCTCCTGCTTCTC+TGG 0.303491 7_4:-59790582 None:intergenic
TTTATATGACAGGCATGTTT+GGG 0.313274 7_4:+59788164 Msa1167340:intron
TGCCTTAGGTTCTCATAATA+AGG 0.315168 7_4:+59790749 Msa1167340:CDS
GGCTTTGAGCATCCACATTT+GGG 0.317971 7_4:-59786432 None:intergenic
GAATCCTGACTTTGGTTATA+TGG 0.319518 7_4:+59790942 Msa1167340:three_prime_UTR
CAACTCCAATCACCTGTTAC+AGG 0.322194 7_4:-59790631 None:intergenic
GGGCTTTGAGCATCCACATT+TGG 0.323797 7_4:-59786433 None:intergenic
CAATATAAAATAGTATTAAA+AGG 0.325816 7_4:-59788404 None:intergenic
TGTTACTGGTGGTTTGGTTA+TGG 0.327232 7_4:+59790970 Msa1167340:three_prime_UTR
AGTTGTTGATTTAGGAAAAC+TGG 0.354420 7_4:+59790865 Msa1167340:three_prime_UTR
TCTTGATCTTCTTTGGATCT+GGG 0.356960 7_4:+59790827 Msa1167340:three_prime_UTR
GGGGAGGTCAGCAAGGATAA+AGG 0.362925 7_4:+59788185 Msa1167340:CDS
AATTTGAGCTATCCCATAAC+TGG 0.378730 7_4:+59788318 Msa1167340:CDS
GCAGATTTACCAGCCTGCTT+AGG 0.386812 7_4:-59790543 None:intergenic
GCTCCCATATTTCCAGTTAT+GGG 0.386902 7_4:-59788330 None:intergenic
TGATGCATTTACAACGGGTT+TGG 0.397107 7_4:-59788804 None:intergenic
CCTTCACTTGGCACTGTGCT+TGG 0.397753 7_4:-59790772 None:intergenic
GTCATGTGTTACTGGTGGTT+TGG 0.406898 7_4:+59790964 Msa1167340:three_prime_UTR
TAGTCTCCAGTTACCTTCTT+CGG 0.410069 7_4:-59789761 None:intergenic
TTATTCTTTAAACATTCATA+TGG 0.410391 7_4:-59791078 None:intergenic
AAAGGATATGAATCATGTTC+CGG 0.414891 7_4:-59788386 None:intergenic
TGGTTATGGTTAGGTGTTTG+AGG 0.419623 7_4:+59790984 Msa1167340:three_prime_UTR
CTGGTGGTTTGGTTATGGTT+AGG 0.420510 7_4:+59790975 Msa1167340:three_prime_UTR
TTTGCCTTCTTCACAGGTAC+AGG 0.429781 7_4:-59789883 None:intergenic
TTTAAGACTGAAGATGCCTT+AGG 0.434410 7_4:+59790735 Msa1167340:CDS
CAGATTTACCAGCCTGCTTA+GGG 0.438934 7_4:-59790542 None:intergenic
ACAGCTGCAAGCCCTGTAAC+AGG 0.439457 7_4:+59790619 Msa1167340:CDS
CACAGGTACAGGTGTTTCCT+TGG 0.451744 7_4:-59789872 None:intergenic
GTGTTTGAGGCATATTAGAA+TGG 0.453336 7_4:+59790997 Msa1167340:three_prime_UTR
ATTCCACTTAATGCTGCTAA+TGG 0.460106 7_4:+59788668 Msa1167340:CDS
GACCATCAAACTTCACATAC+AGG 0.460737 7_4:-59788223 None:intergenic
AACTTCACATACAGGGATAC+CGG 0.463337 7_4:-59788215 None:intergenic
CTTGATCTTCTTTGGATCTG+GGG 0.466662 7_4:+59790828 Msa1167340:three_prime_UTR
TAATAAGCAGCCAGAGAAGC+AGG 0.473969 7_4:+59790572 Msa1167340:CDS
TTACCATTAGCAGCATTAAG+TGG 0.478094 7_4:-59788671 None:intergenic
TTAAGATCGAATCCTGACTT+TGG 0.479498 7_4:+59790934 Msa1167340:three_prime_UTR
GGGAGGTCAGCAAGGATAAA+GGG 0.482905 7_4:+59788186 Msa1167340:CDS
ATTTAGAATCGAATGCGAAC+CGG 0.485135 7_4:+59788367 Msa1167340:CDS
TCCCTGTATGTGAAGTTTGA+TGG 0.494576 7_4:+59788221 Msa1167340:CDS
GCACTCTCTCTCTGCAGTCA+TGG 0.496600 7_4:+59786576 Msa1167340:exon
TATCCCATAACTGGAAATAT+GGG 0.497848 7_4:+59788327 Msa1167340:CDS
GTTTAGAGTATTATTCAACT+TGG 0.499516 7_4:+59790902 Msa1167340:three_prime_UTR
TTAGGTGTTGAGGTAAAACT+TGG 0.502777 7_4:+59788003 Msa1167340:intron
CTGTAATCTCCACTAGACTT+TGG 0.505848 7_4:-59790600 None:intergenic
TTACCAGCCTGCTTAGGGTA+AGG 0.510729 7_4:-59790537 None:intergenic
GATGGTCAGAAGCTTCAACT+TGG 0.513400 7_4:+59788239 Msa1167340:CDS
GGCCTTATTATGAGAACCTA+AGG 0.516695 7_4:-59790751 None:intergenic
AACACCTGTACCTGTGAAGA+AGG 0.532518 7_4:+59789879 Msa1167340:CDS
GCACCATTCACCTCCAACAC+AGG 0.534916 7_4:-59788782 None:intergenic
TTATTTGAACGAAATTCGAA+TGG 0.547131 7_4:-59786485 None:intergenic
TGATACTCCTTACCCTAAGC+AGG 0.550019 7_4:+59790530 Msa1167340:CDS
TTTGTCACTCCAGAGAAGAC+TGG 0.556582 7_4:+59789907 Msa1167340:CDS
ATGACCATATAACCAAAGTC+AGG 0.561551 7_4:-59790946 None:intergenic
CGAGCTTATCCACATTTCAT+CGG 0.569171 7_4:+59788056 Msa1167340:CDS
TTTAGATACTGATTCTGAAG+AGG 0.569513 7_4:+59788640 Msa1167340:intron
CAGTTCAGATTCATCTGATG+AGG 0.575058 7_4:+59788865 Msa1167340:CDS
TGTAGGGAAACCTGTGTTGG+AGG 0.575298 7_4:+59788772 Msa1167340:intron
ACTCCTTACCCTAAGCAGGC+TGG 0.582053 7_4:+59790534 Msa1167340:CDS
AAACCTGTGTTGGAGGTGAA+TGG 0.584764 7_4:+59788779 Msa1167340:CDS
GAGAGTTGCTGAATCTTCCA+AGG 0.586721 7_4:+59789855 Msa1167340:CDS
TTATGTAGGGAAACCTGTGT+TGG 0.588328 7_4:+59788769 Msa1167340:intron
GTCGTTTAGCTCATGGCGAA+TGG 0.589514 7_4:+59789683 Msa1167340:intron
ATATGGTCATGTGTTACTGG+TGG 0.595627 7_4:+59790959 Msa1167340:three_prime_UTR
AACTCCAATCACCTGTTACA+GGG 0.600270 7_4:-59790630 None:intergenic
CAGGAGACTCCAAAGTCTAG+TGG 0.603055 7_4:+59790591 Msa1167340:CDS
CCAAGCACAGTGCCAAGTGA+AGG 0.607793 7_4:+59790772 Msa1167340:CDS
TGAGGATTCTAGTGAAGATG+AGG 0.614205 7_4:+59788883 Msa1167340:CDS
GCATATTAGAATGGATGTGT+TGG 0.614978 7_4:+59791006 Msa1167340:three_prime_UTR
AAGCATATACCGATGAAATG+TGG 0.617686 7_4:-59788065 None:intergenic
AAAACTTGGTGAATCACTCA+AGG 0.619144 7_4:+59788017 Msa1167340:CDS
TGATGAGGAGACACCGAAGA+AGG 0.620434 7_4:+59789748 Msa1167340:CDS
ACTTCACATACAGGGATACC+GGG 0.620641 7_4:-59788214 None:intergenic
ACCATCAAACTTCACATACA+GGG 0.624265 7_4:-59788222 None:intergenic
AAGCGATGAAGATTCTGATG+AGG 0.625838 7_4:+59789733 Msa1167340:CDS
TATATGACAGGCATGTTTGG+GGG 0.631765 7_4:+59788166 Msa1167340:intron
AAAACAGAAAGAGAATCAGA+AGG 0.632429 7_4:+59788826 Msa1167340:CDS
TTATATGACAGGCATGTTTG+GGG 0.632570 7_4:+59788165 Msa1167340:intron
CAAGGATAAAGGGAGTGACC+CGG 0.634157 7_4:+59788196 Msa1167340:CDS
ACCAAATCAAAAGATGTCTG+AGG 0.650289 7_4:-59788284 None:intergenic
AAATGGTAAAGACCCAAATG+TGG 0.651966 7_4:+59786420 None:intergenic
TAGGGTAAGGAGTATCAACG+TGG 0.788217 7_4:-59790524 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTAAAATATTTAAT+TGG - chr7_4:59789518-59789537 None:intergenic 0.0%
!!! TATTTTGTTAAATAATAACA+TGG + chr7_4:59787848-59787867 Msa1167340:intron 10.0%
!! CAATATAAAATAGTATTAAA+AGG - chr7_4:59788407-59788426 None:intergenic 10.0%
!!! TGTTTTTGTTTTTTTCAAAA+AGG - chr7_4:59786694-59786713 None:intergenic 15.0%
!!! TTTCAATATATAATGGATAT+TGG + chr7_4:59788930-59788949 Msa1167340:intron 15.0%
!!! TGTTTTCTAAAGAAATTTTT+TGG - chr7_4:59789143-59789162 None:intergenic 15.0%
!! ATATTTGTACCAAAAATTAA+TGG + chr7_4:59789162-59789181 Msa1167340:intron 15.0%
!!! CATATATAACCATTAATTTT+TGG - chr7_4:59789174-59789193 None:intergenic 15.0%
!! TTAATTTAATGATTGAATCA+GGG + chr7_4:59789541-59789560 Msa1167340:intron 15.0%
!! TCAATAAAAAATTCAGTAAT+CGG - chr7_4:59789619-59789638 None:intergenic 15.0%
!!! ATTACTGAATTTTTTATTGA+AGG + chr7_4:59789619-59789638 Msa1167340:intron 15.0%
!!! ATTCATATTTTAGTTTGTTT+TGG + chr7_4:59789654-59789673 Msa1167340:intron 15.0%
!! CTCAAAATTAAATTCAAATT+CGG - chr7_4:59789807-59789826 None:intergenic 15.0%
!!! ATATCTTATTTTATCAATGT+TGG - chr7_4:59790059-59790078 None:intergenic 15.0%
!! TTATTCTTTAAACATTCATA+TGG - chr7_4:59791081-59791100 None:intergenic 15.0%
!! AAAAATGTAAAGTGATAGAA+AGG - chr7_4:59786629-59786648 None:intergenic 20.0%
!! TTTCATGTATAAATATCGTT+AGG + chr7_4:59786757-59786776 Msa1167340:intron 20.0%
!! ATACATGCTTAAACAAAATT+AGG - chr7_4:59786962-59786981 None:intergenic 20.0%
!! ATGAAAAACTGAATAACAAA+TGG - chr7_4:59787700-59787719 None:intergenic 20.0%
!!! TTGTTATTCAGTTTTTCATT+TGG + chr7_4:59787701-59787720 Msa1167340:intron 20.0%
!!! TAATAACATGGTTTTTAAGA+TGG + chr7_4:59787860-59787879 Msa1167340:intron 20.0%
!!! AATAACATGGTTTTTAAGAT+GGG + chr7_4:59787861-59787880 Msa1167340:intron 20.0%
!! AGATAAAAAAAATCCAAAGA+AGG - chr7_4:59787935-59787954 None:intergenic 20.0%
!! TCTTGTTGCTAAATTAATAT+TGG + chr7_4:59787952-59787971 Msa1167340:intron 20.0%
!!! CGTTAATGTTTTTGTATAAA+TGG + chr7_4:59788132-59788151 Msa1167340:intron 20.0%
!! AAGATAAAAGAATGTAGTTA+AGG - chr7_4:59788497-59788516 None:intergenic 20.0%
!!! ATTGTTCTAAACATTTATGT+AGG + chr7_4:59788755-59788774 Msa1167340:intron 20.0%
!!! TTGTTCTAAACATTTATGTA+GGG + chr7_4:59788756-59788775 Msa1167340:intron 20.0%
!!! AAGTGGATTTCAATATATAA+TGG + chr7_4:59788923-59788942 Msa1167340:intron 20.0%
!! TTGAATTAAATGAAATGCTA+CGG + chr7_4:59789042-59789061 Msa1167340:intron 20.0%
!! GTTAATTTAATGATTGAATC+AGG + chr7_4:59789540-59789559 Msa1167340:intron 20.0%
!! TAATTTAATGATTGAATCAG+GGG + chr7_4:59789542-59789561 Msa1167340:intron 20.0%
!!! TTTGTTTTCTAATTGTACTT+CGG - chr7_4:59790382-59790401 None:intergenic 20.0%
!!! GGCTTTTTTTATGATACAAT+GGG - chr7_4:59786456-59786475 None:intergenic 25.0%
!! AAATTCGAATGGATCTTTTT+GGG - chr7_4:59786477-59786496 None:intergenic 25.0%
! TTATTTGAACGAAATTCGAA+TGG - chr7_4:59786488-59786507 None:intergenic 25.0%
!!! TTGCAGTTTTTGGATAAAAA+TGG + chr7_4:59786782-59786801 Msa1167340:intron 25.0%
!!! TACACAACATTGATTTAAAC+AGG - chr7_4:59786994-59787013 None:intergenic 25.0%
! TACAGATTATTGTCAAATAG+CGG - chr7_4:59787076-59787095 None:intergenic 25.0%
!! TGTTTCTATTGGAAAAAATG+TGG + chr7_4:59787258-59787277 Msa1167340:intron 25.0%
! AATGTGGTAGATTATCTTAT+TGG + chr7_4:59787274-59787293 Msa1167340:intron 25.0%
!! ATCAACTATTCTCAGTTTTA+TGG - chr7_4:59787379-59787398 None:intergenic 25.0%
!!! TGAGAGTTTTATTACACTTT+CGG + chr7_4:59787458-59787477 Msa1167340:intron 25.0%
! AAACTGAATAACAAATGGTA+GGG - chr7_4:59787695-59787714 None:intergenic 25.0%
! AAAACTGAATAACAAATGGT+AGG - chr7_4:59787696-59787715 None:intergenic 25.0%
! CAATGTAATAGAAACTAAAG+AGG - chr7_4:59787791-59787810 None:intergenic 25.0%
! ATATAAAACTCCTTTCATGA+GGG - chr7_4:59787817-59787836 None:intergenic 25.0%
! GCAATATCAAATTATTTCAG+CGG + chr7_4:59787890-59787909 Msa1167340:intron 25.0%
! TAATATTGTGTTTCCTTCTT+TGG + chr7_4:59787919-59787938 Msa1167340:intron 25.0%
! CAAAAACATTAACGATTCAA+TGG - chr7_4:59788126-59788145 None:intergenic 25.0%
!!! ACATCTTTTGATTTGGTTTT+TGG + chr7_4:59788290-59788309 Msa1167340:CDS 25.0%
!!! CATCTTTTGATTTGGTTTTT+GGG + chr7_4:59788291-59788310 Msa1167340:CDS 25.0%
! GACAATAGAAATGCATAAAA+TGG - chr7_4:59788711-59788730 None:intergenic 25.0%
! AATCCACTTTCTAGATTATA+CGG - chr7_4:59788912-59788931 None:intergenic 25.0%
! TACGGAAAAATACAAATGTA+GGG + chr7_4:59789060-59789079 Msa1167340:intron 25.0%
! TAAAGGAAGTCAAAACAATT+TGG - chr7_4:59789352-59789371 None:intergenic 25.0%
! CTAAAAACTCATTCACATAA+AGG - chr7_4:59789369-59789388 None:intergenic 25.0%
! AATTTAATGATTGAATCAGG+GGG + chr7_4:59789543-59789562 Msa1167340:intron 25.0%
! TTTAATATACGATGTAGACT+TGG + chr7_4:59789588-59789607 Msa1167340:intron 25.0%
!! AAACTAACAAACAAAGTACT+GGG - chr7_4:59789944-59789963 None:intergenic 25.0%
! AAAACTAACAAACAAAGTAC+TGG - chr7_4:59789945-59789964 None:intergenic 25.0%
! TAATGTCATCTAGATGAATA+AGG + chr7_4:59790082-59790101 Msa1167340:intron 25.0%
!! TTAGTGACAATTTTGTCTTT+TGG + chr7_4:59790321-59790340 Msa1167340:intron 25.0%
! ATTAACAAAGTAGAACTGAA+AGG + chr7_4:59790458-59790477 Msa1167340:intron 25.0%
!! ACGAGAATTATGATATTTTC+AGG + chr7_4:59790486-59790505 Msa1167340:intron 25.0%
!!! AGAATTATGATATTTTCAGG+TGG + chr7_4:59790489-59790508 Msa1167340:intron 25.0%
!! AAATCAACAACTGTATTTTC+AGG - chr7_4:59790857-59790876 None:intergenic 25.0%
!!! GAAAATACAGTTGTTGATTT+AGG + chr7_4:59790857-59790876 Msa1167340:three_prime_UTR 25.0%
!! GTTTAGAGTATTATTCAACT+TGG + chr7_4:59790902-59790921 Msa1167340:three_prime_UTR 25.0%
!!! GGGCTTTTTTTATGATACAA+TGG - chr7_4:59786457-59786476 None:intergenic 30.0%
! GAAATTCGAATGGATCTTTT+TGG - chr7_4:59786478-59786497 None:intergenic 30.0%
AATGTAAAGTGATAGAAAGG+AGG - chr7_4:59786626-59786645 None:intergenic 30.0%
AGAATCGCATATAAAACGAT+AGG + chr7_4:59786730-59786749 Msa1167340:intron 30.0%
!! CAGTTTTTGGATAAAAATGG+TGG + chr7_4:59786785-59786804 Msa1167340:intron 30.0%
! TAAAAATGGTGGAAATGTGA+TGG + chr7_4:59786796-59786815 Msa1167340:intron 30.0%
TTGTTAAATAGCAACTACAG+CGG - chr7_4:59787157-59787176 None:intergenic 30.0%
AACAAAACAAAAAAACGTCG+AGG - chr7_4:59787216-59787235 None:intergenic 30.0%
! TTTTTCCAATAGAAACATCG+AGG - chr7_4:59787255-59787274 None:intergenic 30.0%
GTTCATTTCAGAGATTAGAT+TGG - chr7_4:59787324-59787343 None:intergenic 30.0%
!!! GAGAGTTTTATTACACTTTC+GGG + chr7_4:59787459-59787478 Msa1167340:intron 30.0%
!!! AGAGTTTTATTACACTTTCG+GGG + chr7_4:59787460-59787479 Msa1167340:intron 30.0%
AACTGAATAACAAATGGTAG+GGG - chr7_4:59787694-59787713 None:intergenic 30.0%
TATAAAACTCCTTTCATGAG+GGG - chr7_4:59787816-59787835 None:intergenic 30.0%
GATATAAAACTCCTTTCATG+AGG - chr7_4:59787818-59787837 None:intergenic 30.0%
!! TGAAAGGAGTTTTATATCAC+TGG + chr7_4:59787820-59787839 Msa1167340:intron 30.0%
!! GAAAGGAGTTTTATATCACT+GGG + chr7_4:59787821-59787840 Msa1167340:intron 30.0%
! TCACAAATCACTATCCTTTT+AGG + chr7_4:59787985-59788004 Msa1167340:intron 30.0%
GTCTCAAATCTTTATATGAC+AGG + chr7_4:59788154-59788173 Msa1167340:intron 30.0%
TTTATATGACAGGCATGTTT+GGG + chr7_4:59788164-59788183 Msa1167340:intron 30.0%
TATCCCATAACTGGAAATAT+GGG + chr7_4:59788327-59788346 Msa1167340:CDS 30.0%
AAAGGATATGAATCATGTTC+CGG - chr7_4:59788389-59788408 None:intergenic 30.0%
ATATTAGAACGCATTGTTGT+TGG - chr7_4:59788454-59788473 None:intergenic 30.0%
!! TTTAGATACTGATTCTGAAG+AGG + chr7_4:59788640-59788659 Msa1167340:intron 30.0%
! TGTTTAGAACAATATGACAC+AGG - chr7_4:59788748-59788767 None:intergenic 30.0%
!!! TGTTTTGATGCATTTACAAC+GGG - chr7_4:59788812-59788831 None:intergenic 30.0%
!!! CTGTTTTGATGCATTTACAA+CGG - chr7_4:59788813-59788832 None:intergenic 30.0%
AAAACAGAAAGAGAATCAGA+AGG + chr7_4:59788826-59788845 Msa1167340:CDS 30.0%
TAACCGTATAATCTAGAAAG+TGG + chr7_4:59788906-59788925 Msa1167340:intron 30.0%
TTTAATTCAATAACTGCAGC+TGG - chr7_4:59789032-59789051 None:intergenic 30.0%
CTACGGAAAAATACAAATGT+AGG + chr7_4:59789059-59789078 Msa1167340:intron 30.0%
AATACTAATTGGGTAGAAGA+AGG + chr7_4:59789090-59789109 Msa1167340:intron 30.0%
AAAACATTCCTGTGATGATT+CGG + chr7_4:59789210-59789229 Msa1167340:intron 30.0%
ACTTACAAAATAGATGAAGC+TGG + chr7_4:59789242-59789261 Msa1167340:intron 30.0%
ACATTCCTACTTAAAAGTGA+AGG + chr7_4:59789306-59789325 Msa1167340:intron 30.0%
!! AAACACCTTCACTTTTAAGT+AGG - chr7_4:59789314-59789333 None:intergenic 30.0%
GATAAGAGTTATCAACTATG+TGG + chr7_4:59789491-59789510 Msa1167340:intron 30.0%
!!! TGAGTTTTGTTTTAGACTGA+AGG + chr7_4:59789823-59789842 Msa1167340:intron 30.0%
!!! GAGTTTTGTTTTAGACTGAA+GGG + chr7_4:59789824-59789843 Msa1167340:intron 30.0%
!! AACTAACAAACAAAGTACTG+GGG - chr7_4:59789943-59789962 None:intergenic 30.0%
! TACAACATTAGTGTCGAATA+AGG - chr7_4:59790005-59790024 None:intergenic 30.0%
TTCGACACTAATGTTGTATA+CGG + chr7_4:59790007-59790026 Msa1167340:intron 30.0%
TTATGCAATAACAGTGCAAA+GGG - chr7_4:59790129-59790148 None:intergenic 30.0%
TTTATGCAATAACAGTGCAA+AGG - chr7_4:59790130-59790149 None:intergenic 30.0%
TGCATAAAATTGCATTGTTG+TGG + chr7_4:59790142-59790161 Msa1167340:intron 30.0%
GTCAGAAAATATTTAACACG+TGG - chr7_4:59790286-59790305 None:intergenic 30.0%
!!! CACAATTTTATTTTGACTGC+AGG + chr7_4:59790709-59790728 Msa1167340:intron 30.0%
AGCTAAAAAAAACCTTCACT+TGG - chr7_4:59790787-59790806 None:intergenic 30.0%
!! AGTTGTTGATTTAGGAAAAC+TGG + chr7_4:59790865-59790884 Msa1167340:three_prime_UTR 30.0%
TGATAGAAAGGAGGAAGAAA+CGG - chr7_4:59786617-59786636 None:intergenic 35.0%
! TCGTTAGGTTTTGCAGTTTT+TGG + chr7_4:59786772-59786791 Msa1167340:intron 35.0%
CGTGAGGATGATGATAATTA+GGG - chr7_4:59786855-59786874 None:intergenic 35.0%
TCGTGAGGATGATGATAATT+AGG - chr7_4:59786856-59786875 None:intergenic 35.0%
CTAAAGCACAAAAAGTTCTG+TGG - chr7_4:59786884-59786903 None:intergenic 35.0%
! CACAGAACTTTTTGTGCTTT+AGG + chr7_4:59786882-59786901 Msa1167340:intron 35.0%
TGTTGTGTAATTGCAGTTAG+TGG + chr7_4:59787005-59787024 Msa1167340:intron 35.0%
TGGATTGTTAAAATTCCGCT+AGG + chr7_4:59787025-59787044 Msa1167340:intron 35.0%
! AAAGACCTCGATGTTTCTAT+TGG + chr7_4:59787247-59787266 Msa1167340:intron 35.0%
AGTTCCTAGAATCATCTTGA+AGG + chr7_4:59787428-59787447 Msa1167340:intron 35.0%
GTTCCTAGAATCATCTTGAA+GGG + chr7_4:59787429-59787448 Msa1167340:intron 35.0%
!!! CGTTGTTTTGGACCTATAAA+AGG + chr7_4:59787485-59787504 Msa1167340:intron 35.0%
! GTTTTACCTCAACACCTAAA+AGG - chr7_4:59788002-59788021 None:intergenic 35.0%
!! TTAGGTGTTGAGGTAAAACT+TGG + chr7_4:59788003-59788022 Msa1167340:intron 35.0%
! AAAACTTGGTGAATCACTCA+AGG + chr7_4:59788017-59788036 Msa1167340:CDS 35.0%
AAGCATATACCGATGAAATG+TGG - chr7_4:59788068-59788087 None:intergenic 35.0%
CTTTATATGACAGGCATGTT+TGG + chr7_4:59788163-59788182 Msa1167340:intron 35.0%
TTATATGACAGGCATGTTTG+GGG + chr7_4:59788165-59788184 Msa1167340:intron 35.0%
ACCATCAAACTTCACATACA+GGG - chr7_4:59788225-59788244 None:intergenic 35.0%
!! TCCTCAGACATCTTTTGATT+TGG + chr7_4:59788283-59788302 Msa1167340:CDS 35.0%
ACCAAATCAAAAGATGTCTG+AGG - chr7_4:59788287-59788306 None:intergenic 35.0%
AATTTGAGCTATCCCATAAC+TGG + chr7_4:59788318-59788337 Msa1167340:CDS 35.0%
CTATCCCATAACTGGAAATA+TGG + chr7_4:59788326-59788345 Msa1167340:CDS 35.0%
! ATTTAGAATCGAATGCGAAC+CGG + chr7_4:59788367-59788386 Msa1167340:CDS 35.0%
ATTCCACTTAATGCTGCTAA+TGG + chr7_4:59788668-59788687 Msa1167340:CDS 35.0%
TTACCATTAGCAGCATTAAG+TGG - chr7_4:59788674-59788693 None:intergenic 35.0%
CATCGAACAACTTTGTGTAT+CGG - chr7_4:59788998-59789017 None:intergenic 35.0%
AAAATACAAATGTAGGGCAC+TGG + chr7_4:59789066-59789085 Msa1167340:intron 35.0%
TAGAAGAAGGTAGGAATACT+TGG + chr7_4:59789103-59789122 Msa1167340:intron 35.0%
AAACATTCCTGTGATGATTC+GGG + chr7_4:59789211-59789230 Msa1167340:intron 35.0%
ACAAAATAGATGAAGCTGGT+CGG + chr7_4:59789246-59789265 Msa1167340:intron 35.0%
ACAGGATTATGAGGACAATT+TGG - chr7_4:59789449-59789468 None:intergenic 35.0%
! TCCTCATAATCCTGTTTTCA+TGG + chr7_4:59789454-59789473 Msa1167340:intron 35.0%
ACCATGAAAACAGGATTATG+AGG - chr7_4:59789458-59789477 None:intergenic 35.0%
! CATAATCCTGTTTTCATGGT+CGG + chr7_4:59789458-59789477 Msa1167340:intron 35.0%
! ACAAATTTTGCCTTCTTCAC+AGG - chr7_4:59789892-59789911 None:intergenic 35.0%
AAAAACTAACCAGTCTTCTC+TGG - chr7_4:59789919-59789938 None:intergenic 35.0%
! TTAGTGTCGAATAAGGCTTA+GGG - chr7_4:59789998-59790017 None:intergenic 35.0%
! ATTAGTGTCGAATAAGGCTT+AGG - chr7_4:59789999-59790018 None:intergenic 35.0%
AGATGAATAAGGTTTGACAG+TGG + chr7_4:59790093-59790112 Msa1167340:intron 35.0%
AACTACTTTGTGACTTATGC+TGG + chr7_4:59790235-59790254 Msa1167340:intron 35.0%
!!! TTATGATATTTTCAGGTGGC+AGG + chr7_4:59790493-59790512 Msa1167340:intron 35.0%
TAAGTGTGTATAGAACGATG+AGG - chr7_4:59790681-59790700 None:intergenic 35.0%
! TTTAAGACTGAAGATGCCTT+AGG + chr7_4:59790735-59790754 Msa1167340:CDS 35.0%
TGCCTTAGGTTCTCATAATA+AGG + chr7_4:59790749-59790768 Msa1167340:CDS 35.0%
ATCTTGATCTTCTTTGGATC+TGG + chr7_4:59790826-59790845 Msa1167340:three_prime_UTR 35.0%
TCTTGATCTTCTTTGGATCT+GGG + chr7_4:59790827-59790846 Msa1167340:three_prime_UTR 35.0%
TTAAGATCGAATCCTGACTT+TGG + chr7_4:59790934-59790953 Msa1167340:three_prime_UTR 35.0%
GAATCCTGACTTTGGTTATA+TGG + chr7_4:59790942-59790961 Msa1167340:three_prime_UTR 35.0%
ATGACCATATAACCAAAGTC+AGG - chr7_4:59790949-59790968 None:intergenic 35.0%
GTTATATGGTCATGTGTTAC+TGG + chr7_4:59790956-59790975 Msa1167340:three_prime_UTR 35.0%
! GTGTTTGAGGCATATTAGAA+TGG + chr7_4:59790997-59791016 Msa1167340:three_prime_UTR 35.0%
GCATATTAGAATGGATGTGT+TGG + chr7_4:59791006-59791025 Msa1167340:three_prime_UTR 35.0%
ACCAGAAGCAAAAACTGAAT+AGG + chr7_4:59791051-59791070 Msa1167340:three_prime_UTR 35.0%
! TCCTATTCAGTTTTTGCTTC+TGG - chr7_4:59791055-59791074 None:intergenic 35.0%
!! CTTTTTGTGCTTTAGGTCAC+TGG + chr7_4:59786889-59786908 Msa1167340:intron 40.0%
TTGTCAAATAGCGGCTATAC+TGG - chr7_4:59787067-59787086 None:intergenic 40.0%
AGTGAATCGCAGAGTAATAG+TGG + chr7_4:59787105-59787124 Msa1167340:intron 40.0%
AGTCCAAATTCCGCTATGAT+AGG + chr7_4:59787130-59787149 Msa1167340:intron 40.0%
GTCCAAATTCCGCTATGATA+GGG + chr7_4:59787131-59787150 Msa1167340:intron 40.0%
AGTCCCTTCAAGATGATTCT+AGG - chr7_4:59787435-59787454 None:intergenic 40.0%
TTGGACCTATAAAAGGTCAC+TGG + chr7_4:59787492-59787511 Msa1167340:intron 40.0%
ACCTATAAAAGGTCACTGGT+TGG + chr7_4:59787496-59787515 Msa1167340:intron 40.0%
! TCCAACCAGTGACCTTTTAT+AGG - chr7_4:59787500-59787519 None:intergenic 40.0%
!! ATCGCAGAATTGGCTTGTAA+AGG + chr7_4:59787519-59787538 Msa1167340:intron 40.0%
GAGACATGAGGATCTAATAG+AGG - chr7_4:59787548-59787567 None:intergenic 40.0%
GTTACAAAGTCAGAGACATG+AGG - chr7_4:59787560-59787579 None:intergenic 40.0%
GAGGTTGAAAAAGACAGAAG+AGG - chr7_4:59787772-59787791 None:intergenic 40.0%
TACATTGTACCCCTCATGAA+AGG + chr7_4:59787804-59787823 Msa1167340:intron 40.0%
!! CACTATCCTTTTAGGTGTTG+AGG + chr7_4:59787993-59788012 Msa1167340:intron 40.0%
!! TGGATAAGCTCGCTATTTTC+TGG - chr7_4:59788048-59788067 None:intergenic 40.0%
CGAGCTTATCCACATTTCAT+CGG + chr7_4:59788056-59788075 Msa1167340:CDS 40.0%
TATATGACAGGCATGTTTGG+GGG + chr7_4:59788166-59788185 Msa1167340:intron 40.0%
AACTTCACATACAGGGATAC+CGG - chr7_4:59788218-59788237 None:intergenic 40.0%
TCCCTGTATGTGAAGTTTGA+TGG + chr7_4:59788221-59788240 Msa1167340:CDS 40.0%
GACCATCAAACTTCACATAC+AGG - chr7_4:59788226-59788245 None:intergenic 40.0%
GCTCCCATATTTCCAGTTAT+GGG - chr7_4:59788333-59788352 None:intergenic 40.0%
AGTGAAGATGAAGCTTCTGA+TGG + chr7_4:59788522-59788541 Msa1167340:intron 40.0%
TTATGTAGGGAAACCTGTGT+TGG + chr7_4:59788769-59788788 Msa1167340:intron 40.0%
! TGATGCATTTACAACGGGTT+TGG - chr7_4:59788807-59788826 None:intergenic 40.0%
CAGTTCAGATTCATCTGATG+AGG + chr7_4:59788865-59788884 Msa1167340:CDS 40.0%
TGAGGATTCTAGTGAAGATG+AGG + chr7_4:59788883-59788902 Msa1167340:CDS 40.0%
!! GTATCGGCACAACATCTTTT+TGG - chr7_4:59788982-59789001 None:intergenic 40.0%
CGATACACAAAGTTGTTCGA+TGG + chr7_4:59788996-59789015 Msa1167340:intron 40.0%
!! AGGGCACTGGTAATACTAAT+TGG + chr7_4:59789079-59789098 Msa1167340:intron 40.0%
!! GGGCACTGGTAATACTAATT+GGG + chr7_4:59789080-59789099 Msa1167340:intron 40.0%
CTAATTGGGTAGAAGAAGGT+AGG + chr7_4:59789094-59789113 Msa1167340:intron 40.0%
!! GTAATGTGTCGTTTAGCTCA+TGG + chr7_4:59789676-59789695 Msa1167340:intron 40.0%
AAGCGATGAAGATTCTGATG+AGG + chr7_4:59789733-59789752 Msa1167340:CDS 40.0%
TAGTCTCCAGTTACCTTCTT+CGG - chr7_4:59789764-59789783 None:intergenic 40.0%
! TAGTGTCGAATAAGGCTTAG+GGG - chr7_4:59789997-59790016 None:intergenic 40.0%
AAGTGGTGAGAGAACATTGT+GGG - chr7_4:59790180-59790199 None:intergenic 40.0%
AAAGTGGTGAGAGAACATTG+TGG - chr7_4:59790181-59790200 None:intergenic 40.0%
ATGGAGCAGCTATTGCTTTA+TGG + chr7_4:59790209-59790228 Msa1167340:intron 40.0%
GTCCAACGAGGTTAAACTAT+CGG - chr7_4:59790412-59790431 None:intergenic 40.0%
ACAAATTAACGAGTCCAACG+AGG - chr7_4:59790424-59790443 None:intergenic 40.0%
CTGTAATCTCCACTAGACTT+TGG - chr7_4:59790603-59790622 None:intergenic 40.0%
AACTCCAATCACCTGTTACA+GGG - chr7_4:59790633-59790652 None:intergenic 40.0%
!! GGCCTTATTATGAGAACCTA+AGG - chr7_4:59790754-59790773 None:intergenic 40.0%
GTGAGCATCTTGATCTTCTT+TGG + chr7_4:59790820-59790839 Msa1167340:three_prime_UTR 40.0%
CTTGATCTTCTTTGGATCTG+GGG + chr7_4:59790828-59790847 Msa1167340:three_prime_UTR 40.0%
! ATATGGTCATGTGTTACTGG+TGG + chr7_4:59790959-59790978 Msa1167340:three_prime_UTR 40.0%
!! TGTTACTGGTGGTTTGGTTA+TGG + chr7_4:59790970-59790989 Msa1167340:three_prime_UTR 40.0%
TGGTTATGGTTAGGTGTTTG+AGG + chr7_4:59790984-59791003 Msa1167340:three_prime_UTR 40.0%
! TCTCTGCAGTCATGGAGTTT+TGG + chr7_4:59786584-59786603 Msa1167340:exon 45.0%
! CTCTGCAGTCATGGAGTTTT+GGG + chr7_4:59786585-59786604 Msa1167340:exon 45.0%
! TCTGCAGTCATGGAGTTTTG+GGG + chr7_4:59786586-59786605 Msa1167340:exon 45.0%
! AGTTCTGTGGAGTTTTCGTG+AGG - chr7_4:59786871-59786890 None:intergenic 45.0%
TCTGTAACACTACAGCCTAG+CGG - chr7_4:59787043-59787062 None:intergenic 45.0%
! ACTTTCGGGGATCGTTGTTT+TGG + chr7_4:59787473-59787492 Msa1167340:intron 45.0%
ACTTCACATACAGGGATACC+GGG - chr7_4:59788217-59788236 None:intergenic 45.0%
GATGGTCAGAAGCTTCAACT+TGG + chr7_4:59788239-59788258 Msa1167340:CDS 45.0%
CGCTCCCATATTTCCAGTTA+TGG - chr7_4:59788334-59788353 None:intergenic 45.0%
!!! TATGGGAGCGTCTTCTTTTC+TGG + chr7_4:59788344-59788363 Msa1167340:CDS 45.0%
AAACCTGTGTTGGAGGTGAA+TGG + chr7_4:59788779-59788798 Msa1167340:CDS 45.0%
TCATGACCGACCATGAAAAC+AGG - chr7_4:59789467-59789486 None:intergenic 45.0%
GAGAGTTGCTGAATCTTCCA+AGG + chr7_4:59789855-59789874 Msa1167340:CDS 45.0%
AACACCTGTACCTGTGAAGA+AGG + chr7_4:59789879-59789898 Msa1167340:CDS 45.0%
TTTGCCTTCTTCACAGGTAC+AGG - chr7_4:59789886-59789905 None:intergenic 45.0%
TTTGTCACTCCAGAGAAGAC+TGG + chr7_4:59789907-59789926 Msa1167340:CDS 45.0%
GGTACTAATGCTGCTCATCT+TGG + chr7_4:59790028-59790047 Msa1167340:intron 45.0%
AGTGGTGAGAGAACATTGTG+GGG - chr7_4:59790179-59790198 None:intergenic 45.0%
CTCACCACTTTGCCTATTCA+TGG + chr7_4:59790190-59790209 Msa1167340:intron 45.0%
TGCTCCATGAATAGGCAAAG+TGG - chr7_4:59790197-59790216 None:intergenic 45.0%
GCAATAGCTGCTCCATGAAT+AGG - chr7_4:59790205-59790224 None:intergenic 45.0%
GACCGATAGTTTAACCTCGT+TGG + chr7_4:59790407-59790426 Msa1167340:intron 45.0%
!! TAGGGTAAGGAGTATCAACG+TGG - chr7_4:59790527-59790546 None:intergenic 45.0%
TGATACTCCTTACCCTAAGC+AGG + chr7_4:59790530-59790549 Msa1167340:CDS 45.0%
CAGATTTACCAGCCTGCTTA+GGG - chr7_4:59790545-59790564 None:intergenic 45.0%
TAATAAGCAGCCAGAGAAGC+AGG + chr7_4:59790572-59790591 Msa1167340:CDS 45.0%
CAACTCCAATCACCTGTTAC+AGG - chr7_4:59790634-59790653 None:intergenic 45.0%
TGTATAGAACGATGAGGAGG+AGG - chr7_4:59790675-59790694 None:intergenic 45.0%
GTGTGTATAGAACGATGAGG+AGG - chr7_4:59790678-59790697 None:intergenic 45.0%
! GTCATGTGTTACTGGTGGTT+TGG + chr7_4:59790964-59790983 Msa1167340:three_prime_UTR 45.0%
!! CTGGTGGTTTGGTTATGGTT+AGG + chr7_4:59790975-59790994 Msa1167340:three_prime_UTR 45.0%
! GGCCCTATCATAGCGGAATT+TGG - chr7_4:59787136-59787155 None:intergenic 50.0%
! CACTGGTTGGATCGCAGAAT+TGG + chr7_4:59787509-59787528 Msa1167340:intron 50.0%
GGGAGGTCAGCAAGGATAAA+GGG + chr7_4:59788186-59788205 Msa1167340:CDS 50.0%
CAAGGATAAAGGGAGTGACC+CGG + chr7_4:59788196-59788215 Msa1167340:CDS 50.0%
TGTAGGGAAACCTGTGTTGG+AGG + chr7_4:59788772-59788791 Msa1167340:intron 50.0%
! CATTCCTGTGATGATTCGGG+TGG + chr7_4:59789214-59789233 Msa1167340:intron 50.0%
ATTGCCACCCGAATCATCAC+AGG - chr7_4:59789221-59789240 None:intergenic 50.0%
AGGGGGCTATTGTGTCTTAG+TGG + chr7_4:59789560-59789579 Msa1167340:intron 50.0%
! GTCGTTTAGCTCATGGCGAA+TGG + chr7_4:59789683-59789702 Msa1167340:intron 50.0%
TGATGAGGAGACACCGAAGA+AGG + chr7_4:59789748-59789767 Msa1167340:CDS 50.0%
GAGACACCGAAGAAGGTAAC+TGG + chr7_4:59789755-59789774 Msa1167340:intron 50.0%
CACAGGTACAGGTGTTTCCT+TGG - chr7_4:59789875-59789894 None:intergenic 50.0%
TTACCAGCCTGCTTAGGGTA+AGG - chr7_4:59790540-59790559 None:intergenic 50.0%
GCAGATTTACCAGCCTGCTT+AGG - chr7_4:59790546-59790565 None:intergenic 50.0%
! TTTGGAGTCTCCTGCTTCTC+TGG - chr7_4:59790585-59790604 None:intergenic 50.0%
CAGGAGACTCCAAAGTCTAG+TGG + chr7_4:59790591-59790610 Msa1167340:CDS 50.0%
CAAGCCCTGTAACAGGTGAT+TGG + chr7_4:59790626-59790645 Msa1167340:intron 50.0%
GCACTCTCTCTCTGCAGTCA+TGG + chr7_4:59786576-59786595 Msa1167340:exon 55.0%
CTACAGCGGCCCTATCATAG+CGG - chr7_4:59787143-59787162 None:intergenic 55.0%
ATGACAGGCATGTTTGGGGG+AGG + chr7_4:59788169-59788188 Msa1167340:intron 55.0%
ATGTTTGGGGGAGGTCAGCA+AGG + chr7_4:59788178-59788197 Msa1167340:CDS 55.0%
GGGGAGGTCAGCAAGGATAA+AGG + chr7_4:59788185-59788204 Msa1167340:CDS 55.0%
GCACCATTCACCTCCAACAC+AGG - chr7_4:59788785-59788804 None:intergenic 55.0%
ACTCCTTACCCTAAGCAGGC+TGG + chr7_4:59790534-59790553 Msa1167340:CDS 55.0%
ACAGCTGCAAGCCCTGTAAC+AGG + chr7_4:59790619-59790638 Msa1167340:CDS 55.0%
CCTTCACTTGGCACTGTGCT+TGG - chr7_4:59790775-59790794 None:intergenic 55.0%
CCAAGCACAGTGCCAAGTGA+AGG + chr7_4:59790772-59790791 Msa1167340:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59786434 59791118 59786434 ID=Msa1167340;Name=Msa1167340
chr7_4 mRNA 59786434 59791118 59786434 ID=Msa1167340-mRNA-1;Parent=Msa1167340;Name=Msa1167340-mRNA-1;_AED=0.22;_eAED=0.22;_QI=161|0.87|0.88|1|1|1|9|327|289
chr7_4 exon 59786434 59786607 59786434 ID=Msa1167340-mRNA-1:exon:18583;Parent=Msa1167340-mRNA-1
chr7_4 exon 59788007 59788077 59788007 ID=Msa1167340-mRNA-1:exon:18584;Parent=Msa1167340-mRNA-1
chr7_4 exon 59788176 59788425 59788176 ID=Msa1167340-mRNA-1:exon:18585;Parent=Msa1167340-mRNA-1
chr7_4 exon 59788645 59788689 59788645 ID=Msa1167340-mRNA-1:exon:18586;Parent=Msa1167340-mRNA-1
chr7_4 exon 59788777 59788904 59788777 ID=Msa1167340-mRNA-1:exon:18587;Parent=Msa1167340-mRNA-1
chr7_4 exon 59789692 59789769 59789692 ID=Msa1167340-mRNA-1:exon:18588;Parent=Msa1167340-mRNA-1
chr7_4 exon 59789838 59789928 59789838 ID=Msa1167340-mRNA-1:exon:18589;Parent=Msa1167340-mRNA-1
chr7_4 exon 59790508 59790640 59790508 ID=Msa1167340-mRNA-1:exon:18590;Parent=Msa1167340-mRNA-1
chr7_4 exon 59790731 59791118 59790731 ID=Msa1167340-mRNA-1:exon:18591;Parent=Msa1167340-mRNA-1
chr7_4 five_prime_UTR 59786434 59786594 59786434 ID=Msa1167340-mRNA-1:five_prime_utr;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59786595 59786607 59786595 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59788007 59788077 59788007 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59788176 59788425 59788176 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59788645 59788689 59788645 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59788777 59788904 59788777 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59789692 59789769 59789692 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59789838 59789928 59789838 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59790508 59790640 59790508 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 CDS 59790731 59790791 59790731 ID=Msa1167340-mRNA-1:cds;Parent=Msa1167340-mRNA-1
chr7_4 three_prime_UTR 59790792 59791118 59790792 ID=Msa1167340-mRNA-1:three_prime_utr;Parent=Msa1167340-mRNA-1
Gene Sequence

>Msa1167340

ATGGAGTTTTGGGGTGTTGAGGTAAAACTTGGTGAATCACTCAAGGTTGTTCCAGAAAATAGCGAGCTTATCCACATTTCATCGGCATGTTTGGGGGAGGTCAGCAAGGATAAAGGGAGTGACCCGGTATCCCTGTATGTGAAGTTTGATGGTCAGAAGCTTCAACTTGGAACACTTTCTTCAGAAAAATTTCCTCAGACATCTTTTGATTTGGTTTTTGGGAAGAAATTTGAGCTATCCCATAACTGGAAATATGGGAGCGTCTTCTTTTCTGGATTTAGAATCGAATGCGAACCGGAACATGATTCATATCCTTTTAATACTATTTTATATTATACTGATTCTGAAGAGGAAGATATTCCACTTAATGCTGCTAATGGGAAACCTGTGTTGGAGGTGAATGGTGCCAAACCCGTTGTAAATGCATCAAAACAGAAAGAGAATCAGAAGGATGCTAGTACTGACGACAGTTCAGATTCATCTGATGAGGATTCTAGTGAAGATGAGCTCATGGCGAATGGTCAAATTAAAAGTAGTAGTGAAGATGAAAGCGATGAAGATTCTGATGAGGAGACACCGAAGAAGACTGAAGGGAGCAACAAGAGAGTTGCTGAATCTTCCAAGGAAACACCTGTACCTGTGAAGAAGGCAAAATTTGTCACTCCAGAGAAGACTGGTGGCAGGAGTAGTGTCCACGTTGATACTCCTTACCCTAAGCAGGCTGGTAAATCTGCTGCAAATAATAAGCAGCCAGAGAAGCAGGAGACTCCAAAGTCTAGTGGAGATTACAGCTGCAAGCCCTGTAACAGGTCTTTTAAGACTGAAGATGCCTTAGGTTCTCATAATAAGGCCAAGCACAGTGCCAAGTGA

Protein sequence

>Msa1167340

MEFWGVEVKLGESLKVVPENSELIHISSACLGEVSKDKGSDPVSLYVKFDGQKLQLGTLSSEKFPQTSFDLVFGKKFELSHNWKYGSVFFSGFRIECEPEHDSYPFNTILYYTDSEEEDIPLNAANGKPVLEVNGAKPVVNASKQKENQKDASTDDSSDSSDEDSSEDELMANGQIKSSSEDESDEDSDEETPKKTEGSNKRVAESSKETPVPVKKAKFVTPEKTGGRSSVHVDTPYPKQAGKSAANNKQPEKQETPKSSGDYSCKPCNRSFKTEDALGSHNKAKHSAK*