Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026740 | XP_013470072.1 | 93.173 | 249 | 17 | 0 | 6 | 254 | 2 | 250 | 1.46e-172 | 485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026740 | sp|Q8L9J9|CAES_ARATH | 61.660 | 253 | 91 | 3 | 4 | 253 | 10 | 259 | 1.21e-106 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026740 | A0A072W1E8 | 93.173 | 249 | 17 | 0 | 6 | 254 | 2 | 250 | 6.95e-173 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1026740 | 0.819619 | 1.055974e-52 | -8.615850e-47 |
| Msa0020930 | Msa1026740 | 0.824709 | 6.970234e-54 | -8.615850e-47 |
| Msa0031340 | Msa1026740 | 0.812022 | 5.225014e-51 | -8.615850e-47 |
| Msa0032090 | Msa1026740 | 0.806069 | 9.838367e-50 | -8.615850e-47 |
| Msa0032430 | Msa1026740 | 0.807358 | 5.255231e-50 | -8.615850e-47 |
| Msa0037570 | Msa1026740 | -0.806412 | 8.328682e-50 | -8.615850e-47 |
| Msa0045790 | Msa1026740 | 0.815789 | 7.721360e-52 | -8.615850e-47 |
| Msa0046160 | Msa1026740 | 0.817516 | 3.167171e-52 | -8.615850e-47 |
| Msa0068680 | Msa1026740 | 0.811357 | 7.290109e-51 | -8.615850e-47 |
| Msa0079380 | Msa1026740 | 0.821960 | 3.058122e-53 | -8.615850e-47 |
| Msa0080090 | Msa1026740 | 0.814399 | 1.571808e-51 | -8.615850e-47 |
| Msa0083280 | Msa1026740 | 0.816775 | 4.646860e-52 | -8.615850e-47 |
| Msa0084380 | Msa1026740 | 0.850713 | 1.421106e-60 | -8.615850e-47 |
| Msa0090360 | Msa1026740 | 0.829369 | 5.351427e-55 | -8.615850e-47 |
| Msa0091460 | Msa1026740 | 0.800483 | 1.411183e-48 | -8.615850e-47 |
| Msa0095560 | Msa1026740 | 0.807035 | 6.153984e-50 | -8.615850e-47 |
| Msa0114060 | Msa1026740 | 0.825367 | 4.871754e-54 | -8.615850e-47 |
| Msa0607050 | Msa1026740 | 0.821625 | 3.654791e-53 | -8.615850e-47 |
| Msa0615710 | Msa1026740 | 0.828342 | 9.482078e-55 | -8.615850e-47 |
| Msa0616160 | Msa1026740 | 0.814795 | 1.284053e-51 | -8.615850e-47 |
| Msa0617640 | Msa1026740 | 0.801714 | 7.904401e-49 | -8.615850e-47 |
| Msa0625720 | Msa1026740 | 0.826574 | 2.517882e-54 | -8.615850e-47 |
| Msa0649490 | Msa1026740 | 0.826080 | 3.300473e-54 | -8.615850e-47 |
| Msa0662340 | Msa1026740 | 0.818154 | 2.272800e-52 | -8.615850e-47 |
| Msa0663390 | Msa1026740 | 0.848857 | 4.689909e-60 | -8.615850e-47 |
| Msa0663810 | Msa1026740 | 0.800655 | 1.301361e-48 | -8.615850e-47 |
| Msa0667050 | Msa1026740 | 0.813235 | 2.836510e-51 | -8.615850e-47 |
| Msa0682330 | Msa1026740 | 0.801654 | 8.130913e-49 | -8.615850e-47 |
| Msa0693010 | Msa1026740 | -0.807347 | 5.284451e-50 | -8.615850e-47 |
| Msa0697030 | Msa1026740 | 0.801782 | 7.653595e-49 | -8.615850e-47 |
| Msa0701830 | Msa1026740 | 0.805314 | 1.417179e-49 | -8.615850e-47 |
| Msa0707250 | Msa1026740 | 0.811759 | 5.961513e-51 | -8.615850e-47 |
| Msa0709400 | Msa1026740 | 0.849972 | 2.293765e-60 | -8.615850e-47 |
| Msa0711780 | Msa1026740 | 0.807800 | 4.233997e-50 | -8.615850e-47 |
| Msa0717890 | Msa1026740 | 0.811125 | 8.184769e-51 | -8.615850e-47 |
| Msa0722720 | Msa1026740 | 0.801289 | 9.660781e-49 | -8.615850e-47 |
| Msa0740510 | Msa1026740 | 0.818539 | 1.859937e-52 | -8.615850e-47 |
| Msa0740520 | Msa1026740 | 0.812292 | 4.561387e-51 | -8.615850e-47 |
| Msa0741840 | Msa1026740 | 0.826257 | 2.995359e-54 | -8.615850e-47 |
| Msa0742380 | Msa1026740 | 0.800432 | 1.444931e-48 | -8.615850e-47 |
| Msa0744040 | Msa1026740 | 0.809963 | 1.459404e-50 | -8.615850e-47 |
| Msa0765910 | Msa1026740 | 0.838393 | 2.952756e-57 | -8.615850e-47 |
| Msa0767300 | Msa1026740 | 0.808254 | 3.390352e-50 | -8.615850e-47 |
| Msa0770720 | Msa1026740 | 0.813914 | 2.010820e-51 | -8.615850e-47 |
| Msa0794670 | Msa1026740 | 0.809463 | 1.868865e-50 | -8.615850e-47 |
| Msa0806790 | Msa1026740 | 0.800548 | 1.368472e-48 | -8.615850e-47 |
| Msa0818060 | Msa1026740 | 0.801260 | 9.793579e-49 | -8.615850e-47 |
| Msa0820770 | Msa1026740 | 0.824575 | 7.493395e-54 | -8.615850e-47 |
| Msa0824960 | Msa1026740 | 0.817672 | 2.920553e-52 | -8.615850e-47 |
| Msa0831110 | Msa1026740 | 0.839359 | 1.661588e-57 | -8.615850e-47 |
| Msa0835800 | Msa1026740 | 0.815499 | 8.958237e-52 | -8.615850e-47 |
| Msa0124060 | Msa1026740 | 0.820519 | 6.573033e-53 | -8.615850e-47 |
| Msa0127650 | Msa1026740 | 0.802187 | 6.319277e-49 | -8.615850e-47 |
| Msa0137840 | Msa1026740 | 0.810765 | 9.795116e-51 | -8.615850e-47 |
| Msa0150300 | Msa1026740 | 0.804493 | 2.103885e-49 | -8.615850e-47 |
| Msa0159930 | Msa1026740 | 0.826471 | 2.664378e-54 | -8.615850e-47 |
| Msa0168500 | Msa1026740 | 0.821961 | 3.056689e-53 | -8.615850e-47 |
| Msa0172070 | Msa1026740 | 0.804817 | 1.800790e-49 | -8.615850e-47 |
| Msa0184040 | Msa1026740 | 0.823458 | 1.370324e-53 | -8.615850e-47 |
| Msa0189320 | Msa1026740 | 0.811627 | 6.370559e-51 | -8.615850e-47 |
| Msa0211150 | Msa1026740 | 0.861860 | 7.620957e-64 | -8.615850e-47 |
| Msa0221470 | Msa1026740 | 0.803749 | 3.005300e-49 | -8.615850e-47 |
| Msa0367870 | Msa1026740 | 0.809664 | 1.692159e-50 | -8.615850e-47 |
| Msa0376350 | Msa1026740 | 0.806016 | 1.009549e-49 | -8.615850e-47 |
| Msa0376630 | Msa1026740 | 0.824094 | 9.725489e-54 | -8.615850e-47 |
| Msa0393080 | Msa1026740 | 0.821620 | 3.664165e-53 | -8.615850e-47 |
| Msa0403950 | Msa1026740 | 0.810436 | 1.153877e-50 | -8.615850e-47 |
| Msa0403970 | Msa1026740 | 0.801640 | 8.183629e-49 | -8.615850e-47 |
| Msa0410650 | Msa1026740 | 0.805428 | 1.341656e-49 | -8.615850e-47 |
| Msa0424790 | Msa1026740 | 0.806332 | 8.660987e-50 | -8.615850e-47 |
| Msa0428080 | Msa1026740 | 0.808551 | 2.929814e-50 | -8.615850e-47 |
| Msa0440750 | Msa1026740 | 0.845758 | 3.325329e-59 | -8.615850e-47 |
| Msa0452710 | Msa1026740 | 0.826756 | 2.277485e-54 | -8.615850e-47 |
| Msa0464380 | Msa1026740 | 0.803342 | 3.649607e-49 | -8.615850e-47 |
| Msa0467490 | Msa1026740 | 0.843662 | 1.220924e-58 | -8.615850e-47 |
| Msa0471670 | Msa1026740 | 0.827022 | 1.967594e-54 | -8.615850e-47 |
| Msa0479170 | Msa1026740 | 0.839932 | 1.178891e-57 | -8.615850e-47 |
| Msa0479970 | Msa1026740 | 0.805129 | 1.549395e-49 | -8.615850e-47 |
| Msa0481530 | Msa1026740 | 0.842600 | 2.341551e-58 | -8.615850e-47 |
| Msa0980880 | Msa1026740 | 0.801957 | 7.045373e-49 | -8.615850e-47 |
| Msa0997370 | Msa1026740 | 0.822187 | 2.709098e-53 | -8.615850e-47 |
| Msa0999870 | Msa1026740 | 0.803158 | 3.983977e-49 | -8.615850e-47 |
| Msa1018980 | Msa1026740 | 0.809762 | 1.611699e-50 | -8.615850e-47 |
| Msa1019000 | Msa1026740 | 0.808761 | 2.641837e-50 | -8.615850e-47 |
| Msa1026740 | Msa1029310 | 0.819909 | 9.066494e-53 | -8.615850e-47 |
| Msa1026740 | Msa1035480 | 0.817137 | 3.854711e-52 | -8.615850e-47 |
| Msa1026740 | Msa1035960 | 0.826929 | 2.070957e-54 | -8.615850e-47 |
| Msa1026740 | Msa1043370 | 0.802514 | 5.412454e-49 | -8.615850e-47 |
| Msa1026740 | Msa1045200 | 0.813579 | 2.383483e-51 | -8.615850e-47 |
| Msa1026740 | Msa1075650 | 0.803332 | 3.667186e-49 | -8.615850e-47 |
| Msa1026740 | Msa1078170 | 0.823304 | 1.488384e-53 | -8.615850e-47 |
| Msa1026740 | Msa1081980 | 0.820930 | 5.286494e-53 | -8.615850e-47 |
| Msa1026740 | Msa1082500 | 0.804621 | 1.978835e-49 | -8.615850e-47 |
| Msa1026740 | Msa1085200 | 0.815217 | 1.035044e-51 | -8.615850e-47 |
| Msa1026740 | Msa1101090 | 0.823596 | 1.271794e-53 | -8.615850e-47 |
| Msa1026740 | Msa1104560 | 0.816640 | 4.981668e-52 | -8.615850e-47 |
| Msa1026740 | Msa1117780 | 0.804098 | 2.542138e-49 | -8.615850e-47 |
| Msa1026740 | Msa1123380 | 0.832621 | 8.514201e-56 | -8.615850e-47 |
| Msa1026740 | Msa1124020 | 0.801975 | 6.986733e-49 | -8.615850e-47 |
| Msa1026740 | Msa1124960 | 0.848430 | 6.158612e-60 | -8.615850e-47 |
| Msa1026740 | Msa1131220 | 0.802804 | 4.716014e-49 | -8.615850e-47 |
| Msa1026740 | Msa1142020 | 0.811657 | 6.275690e-51 | -8.615850e-47 |
| Msa1026740 | Msa1165920 | 0.830085 | 3.581277e-55 | -8.615850e-47 |
| Msa1026740 | Msa1167340 | 0.818882 | 1.554055e-52 | -8.615850e-47 |
| Msa1026740 | Msa1189070 | 0.807267 | 5.494097e-50 | -8.615850e-47 |
| Msa1026740 | Msa1204530 | 0.833537 | 5.037075e-56 | -8.615850e-47 |
| Msa1026740 | Msa1204630 | 0.825361 | 4.888500e-54 | -8.615850e-47 |
| Msa1026740 | Msa1228590 | 0.807089 | 5.992251e-50 | -8.615850e-47 |
| Msa1026740 | Msa1229500 | 0.800268 | 1.560490e-48 | -8.615850e-47 |
| Msa1026740 | Msa1233910 | 0.808081 | 3.689783e-50 | -8.615850e-47 |
| Msa1026740 | Msa1244600 | 0.802238 | 6.169363e-49 | -8.615850e-47 |
| Msa1026740 | Msa1279400 | 0.810139 | 1.337101e-50 | -8.615850e-47 |
| Msa1026740 | Msa1284550 | 0.812616 | 3.876637e-51 | -8.615850e-47 |
| Msa1026740 | Msa1287460 | 0.809161 | 2.169049e-50 | -8.615850e-47 |
| Msa1026740 | Msa1296760 | 0.857159 | 1.974089e-62 | -8.615850e-47 |
| Msa1026740 | Msa1297230 | 0.803571 | 3.270993e-49 | -8.615850e-47 |
| Msa1026740 | Msa1306840 | 0.813938 | 1.986959e-51 | -8.615850e-47 |
| Msa1026740 | Msa1308870 | 0.822867 | 1.882246e-53 | -8.615850e-47 |
| Msa1026740 | Msa1314650 | 0.817102 | 3.924217e-52 | -8.615850e-47 |
| Msa1026740 | Msa1320410 | 0.815102 | 1.097949e-51 | -8.615850e-47 |
| Msa1026740 | Msa1324080 | 0.802944 | 4.411694e-49 | -8.615850e-47 |
| Msa1026740 | Msa1328710 | 0.805643 | 1.209104e-49 | -8.615850e-47 |
| Msa1026740 | Msa1331000 | 0.838010 | 3.707356e-57 | -8.615850e-47 |
| Msa1026740 | Msa1333480 | 0.801125 | 1.043730e-48 | -8.615850e-47 |
| Msa1026740 | Msa1335540 | 0.817968 | 2.504095e-52 | -8.615850e-47 |
| Msa1026740 | Msa1353980 | 0.867261 | 1.559498e-65 | -8.615850e-47 |
| Msa1026740 | Msa1360440 | 0.822644 | 2.120975e-53 | -8.615850e-47 |
| Msa1026740 | Msa1368430 | 0.809969 | 1.454527e-50 | -8.615850e-47 |
| Msa1026740 | Msa1373030 | 0.811469 | 6.894849e-51 | -8.615850e-47 |
| Msa1026740 | Msa1393570 | 0.825803 | 3.840706e-54 | -8.615850e-47 |
| Msa1026740 | Msa1394380 | 0.808951 | 2.406724e-50 | -8.615850e-47 |
| Msa1026740 | Msa1398340 | 0.806459 | 8.142347e-50 | -8.615850e-47 |
| Msa1026740 | Msa1400870 | -0.812759 | 3.607050e-51 | -8.615850e-47 |
| Msa1026740 | Msa1404300 | 0.807746 | 4.347709e-50 | -8.615850e-47 |
| Msa1026740 | Msa1409700 | 0.811975 | 5.348628e-51 | -8.615850e-47 |
| Msa1026740 | Msa1411020 | 0.804645 | 1.955387e-49 | -8.615850e-47 |
| Msa1026740 | Msa1412640 | 0.834497 | 2.896833e-56 | -8.615850e-47 |
| Msa1026740 | Msa1424290 | 0.801951 | 7.064706e-49 | -8.615850e-47 |
| Msa1026740 | Msa1424450 | 0.807307 | 5.389552e-50 | -8.615850e-47 |
| Msa1026740 | Msa1424750 | 0.817098 | 3.932006e-52 | -8.615850e-47 |
| Msa1026740 | Msa1425880 | 0.813566 | 2.398789e-51 | -8.615850e-47 |
| Msa1026740 | Msa1432420 | 0.810272 | 1.251979e-50 | -8.615850e-47 |
| Msa1026740 | Msa1433390 | 0.827702 | 1.351831e-54 | -8.615850e-47 |
| Msa1026740 | Msa1434350 | 0.805645 | 1.207633e-49 | -8.615850e-47 |
| Msa1026740 | Msa1436480 | 0.810450 | 1.145664e-50 | -8.615850e-47 |
| Msa1026740 | Msa1437180 | 0.804183 | 2.441579e-49 | -8.615850e-47 |
| Msa1026740 | Msa1439320 | 0.809357 | 1.969405e-50 | -8.615850e-47 |
| Msa1026740 | Msa1451160 | 0.825925 | 3.592022e-54 | -8.615850e-47 |
| Msa1026740 | Msa1460020 | 0.821523 | 3.858321e-53 | -8.615850e-47 |
| Msa1026740 | Msa1464810 | 0.823632 | 1.247852e-53 | -8.615850e-47 |
| Msa1026740 | Msa1466540 | 0.825718 | 4.024005e-54 | -8.615850e-47 |
| Msa0243100 | Msa1026740 | 0.801208 | 1.003667e-48 | -8.615850e-47 |
| Msa0254790 | Msa1026740 | 0.803794 | 2.940862e-49 | -8.615850e-47 |
| Msa0259500 | Msa1026740 | 0.803688 | 3.093232e-49 | -8.615850e-47 |
| Msa0260680 | Msa1026740 | 0.816579 | 5.142567e-52 | -8.615850e-47 |
| Msa0267920 | Msa1026740 | 0.821724 | 3.467621e-53 | -8.615850e-47 |
| Msa0271510 | Msa1026740 | 0.807696 | 4.456194e-50 | -8.615850e-47 |
| Msa0280090 | Msa1026740 | 0.819262 | 1.274034e-52 | -8.615850e-47 |
| Msa0287410 | Msa1026740 | 0.802190 | 6.309103e-49 | -8.615850e-47 |
| Msa0287650 | Msa1026740 | 0.822497 | 2.294871e-53 | -8.615850e-47 |
| Msa0309770 | Msa1026740 | 0.823884 | 1.089321e-53 | -8.615850e-47 |
| Msa0317730 | Msa1026740 | 0.802414 | 5.675338e-49 | -8.615850e-47 |
| Msa0326940 | Msa1026740 | 0.800077 | 1.706699e-48 | -8.615850e-47 |
| Msa0340470 | Msa1026740 | 0.813292 | 2.755422e-51 | -8.615850e-47 |
| Msa0342310 | Msa1026740 | 0.809960 | 1.461073e-50 | -8.615850e-47 |
| Msa0345970 | Msa1026740 | 0.838463 | 2.833125e-57 | -8.615850e-47 |
| Msa0363790 | Msa1026740 | 0.804358 | 2.244449e-49 | -8.615850e-47 |
| Msa0488560 | Msa1026740 | 0.806126 | 9.570491e-50 | -8.615850e-47 |
| Msa0501460 | Msa1026740 | 0.814494 | 1.497033e-51 | -8.615850e-47 |
| Msa0507680 | Msa1026740 | 0.818064 | 2.382411e-52 | -8.615850e-47 |
| Msa0516170 | Msa1026740 | 0.805367 | 1.381377e-49 | -8.615850e-47 |
| Msa0529890 | Msa1026740 | 0.826860 | 2.151731e-54 | -8.615850e-47 |
| Msa0545210 | Msa1026740 | 0.817385 | 3.389795e-52 | -8.615850e-47 |
| Msa0546680 | Msa1026740 | 0.809629 | 1.721984e-50 | -8.615850e-47 |
| Msa0547170 | Msa1026740 | 0.814132 | 1.799751e-51 | -8.615850e-47 |
| Msa0548240 | Msa1026740 | 0.804662 | 1.940063e-49 | -8.615850e-47 |
| Msa0563840 | Msa1026740 | 0.804879 | 1.747525e-49 | -8.615850e-47 |
| Msa0569200 | Msa1026740 | 0.808848 | 2.531153e-50 | -8.615850e-47 |
| Msa0577500 | Msa1026740 | 0.813291 | 2.756570e-51 | -8.615850e-47 |
| Msa0585560 | Msa1026740 | 0.836877 | 7.230509e-57 | -8.615850e-47 |
| Msa0602390 | Msa1026740 | 0.829814 | 4.169113e-55 | -8.615850e-47 |
| Msa0602460 | Msa1026740 | 0.807573 | 4.731370e-50 | -8.615850e-47 |
| Msa0842790 | Msa1026740 | 0.817120 | 3.888750e-52 | -8.615850e-47 |
| Msa0861090 | Msa1026740 | 0.821472 | 3.965597e-53 | -8.615850e-47 |
| Msa0862320 | Msa1026740 | 0.800699 | 1.275317e-48 | -8.615850e-47 |
| Msa0871270 | Msa1026740 | 0.812934 | 3.302669e-51 | -8.615850e-47 |
| Msa0876190 | Msa1026740 | 0.805678 | 1.188545e-49 | -8.615850e-47 |
| Msa0880020 | Msa1026740 | 0.844097 | 9.336894e-59 | -8.615850e-47 |
| Msa0880950 | Msa1026740 | 0.813350 | 2.676788e-51 | -8.615850e-47 |
| Msa0895120 | Msa1026740 | 0.802782 | 4.764869e-49 | -8.615850e-47 |
| Msa0898750 | Msa1026740 | 0.822555 | 2.225156e-53 | -8.615850e-47 |
| Msa0899980 | Msa1026740 | 0.809146 | 2.186118e-50 | -8.615850e-47 |
| Msa0909740 | Msa1026740 | 0.807140 | 5.844698e-50 | -8.615850e-47 |
| Msa0920610 | Msa1026740 | 0.813204 | 2.881308e-51 | -8.615850e-47 |
| Msa0926890 | Msa1026740 | 0.804850 | 1.771884e-49 | -8.615850e-47 |
| Msa0928130 | Msa1026740 | 0.828454 | 8.909686e-55 | -8.615850e-47 |
| Msa0935670 | Msa1026740 | 0.804025 | 2.632715e-49 | -8.615850e-47 |
| Msa0938220 | Msa1026740 | 0.826640 | 2.427539e-54 | -8.615850e-47 |
| Msa0945970 | Msa1026740 | 0.808926 | 2.436313e-50 | -8.615850e-47 |
| Msa0947660 | Msa1026740 | 0.811439 | 6.998593e-51 | -8.615850e-47 |
| Msa0964310 | Msa1026740 | 0.842808 | 2.062277e-58 | -8.615850e-47 |
| Msa0966400 | Msa1026740 | 0.803862 | 2.847248e-49 | -8.615850e-47 |
| Msa0974070 | Msa1026740 | 0.806969 | 6.352514e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026740 | MtrunA17_Chr1g0208131 | 93.173 | 249 | 17 | 0 | 6 | 254 | 2 | 250 | 1.34e-176 | 485 |
| Msa1026740 | MtrunA17_Chr1g0152921 | 59.917 | 242 | 86 | 4 | 13 | 251 | 23 | 256 | 1.47e-96 | 283 |
| Msa1026740 | MtrunA17_Chr3g0134281 | 53.942 | 241 | 105 | 4 | 13 | 250 | 20 | 257 | 8.62e-85 | 255 |
| Msa1026740 | MtrunA17_Chr4g0013791 | 52.198 | 182 | 83 | 4 | 13 | 192 | 20 | 199 | 1.02e-60 | 190 |
| Msa1026740 | MtrunA17_Chr0c04g0492041 | 55.405 | 148 | 61 | 3 | 13 | 158 | 20 | 164 | 7.59e-52 | 167 |
| Msa1026740 | MtrunA17_Chr4g0013781 | 56.667 | 60 | 25 | 1 | 192 | 250 | 2 | 61 | 1.99e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026740 | AT4G34215.2 | 61.660 | 253 | 91 | 3 | 4 | 253 | 10 | 259 | 1.23e-107 | 311 |
| Msa1026740 | AT4G34215.1 | 61.660 | 253 | 91 | 3 | 4 | 253 | 10 | 259 | 1.23e-107 | 311 |
| Msa1026740 | AT3G53010.1 | 52.340 | 235 | 107 | 4 | 18 | 250 | 31 | 262 | 2.49e-83 | 251 |
Find 90 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGAATCTCAGGTTAAAT+TGG | 0.142562 | 7_1:-58906368 | Msa1026740:CDS |
| TATTTACTCACGAGTATATA+TGG | 0.250065 | 7_1:-58906214 | Msa1026740:three_prime_UTR |
| ACGAAAGAAACCTGGATTAT+TGG | 0.250652 | 7_1:+58906676 | None:intergenic |
| GCGGCACGTGGCCGGACAAT+TGG | 0.311674 | 7_1:-58906944 | Msa1026740:CDS |
| CTTGAATTTGATGAATAGAT+TGG | 0.320069 | 7_1:-58906110 | Msa1026740:three_prime_UTR |
| GAGGATGAAGATGTGTCTTT+TGG | 0.323170 | 7_1:+58907197 | None:intergenic |
| TCTCAAAACGTTTACATTAG+TGG | 0.354106 | 7_1:+58906086 | None:intergenic |
| ACCTATGCCGCAGACTTTCT+TGG | 0.357757 | 7_1:+58906996 | None:intergenic |
| ACGCCGTTCCAACGCTTGTT+TGG | 0.365887 | 7_1:+58907117 | None:intergenic |
| CGTTGGTGGCACTGCAATAA+AGG | 0.368691 | 7_1:-58906905 | Msa1026740:CDS |
| CAGAGATCAAAGCGTTGCTT+TGG | 0.390709 | 7_1:-58906807 | Msa1026740:CDS |
| TATTAGGTAGCGCTAGCATC+AGG | 0.399863 | 7_1:-58906502 | Msa1026740:intron |
| GCTTCAGCGCCAACCTCAAA+TGG | 0.402431 | 7_1:-58907056 | Msa1026740:CDS |
| GGAAGAACTGTACGAAAATA+TGG | 0.406934 | 7_1:-58906869 | Msa1026740:CDS |
| AAAGCGTTGCTTTGGTTTCA+AGG | 0.409406 | 7_1:-58906799 | Msa1026740:CDS |
| TTGAATTTGATGAATAGATT+GGG | 0.424188 | 7_1:-58906109 | Msa1026740:three_prime_UTR |
| GACTTTCTTGGCGTCGATGT+CGG | 0.432754 | 7_1:+58907008 | None:intergenic |
| AGAACGAAAGAAAGCGTAAA+GGG | 0.436358 | 7_1:-58906841 | Msa1026740:CDS |
| CGGCACGTGGCCGGACAATT+GGG | 0.448793 | 7_1:-58906943 | Msa1026740:CDS |
| TATAAAGAGTAATGCACATC+CGG | 0.453695 | 7_1:+58906004 | None:intergenic |
| GCATCAATGCAAATCACATT+CGG | 0.459298 | 7_1:+58906430 | None:intergenic |
| ACCTTCTCTTCCAATAATCC+AGG | 0.468979 | 7_1:-58906686 | Msa1026740:intron |
| GGTTAAATTGGGTCACATGC+TGG | 0.473381 | 7_1:-58906356 | Msa1026740:CDS |
| AGGTGAAGAAGCCATGGAAA+TGG | 0.475719 | 7_1:-58907250 | Msa1026740:exon |
| GCTGACAAACTTGCAAGAGC+TGG | 0.476074 | 7_1:-58907274 | Msa1026740:five_prime_UTR |
| TCACTTGAACACAGAATCTC+AGG | 0.480989 | 7_1:-58906377 | Msa1026740:CDS |
| AGACACATCTTCATCCTCTC+TGG | 0.481977 | 7_1:-58907192 | Msa1026740:CDS |
| ACAGAATCTCAGGTTAAATT+GGG | 0.482638 | 7_1:-58906367 | Msa1026740:CDS |
| CACATCCGGGGTTCAAACCC+CGG | 0.489976 | 7_1:+58906018 | None:intergenic |
| AAGTGAGAGAAGCGCAGAAA+GGG | 0.490078 | 7_1:-58906462 | Msa1026740:CDS |
| CGTGTGTTGGTTCCCATTTG+AGG | 0.497168 | 7_1:+58907043 | None:intergenic |
| ACCTGGATTATTGGAAGAGA+AGG | 0.498005 | 7_1:+58906685 | None:intergenic |
| CAAAGTGAGTGGAAAATACA+AGG | 0.498879 | 7_1:+58905976 | None:intergenic |
| TGCCAACATAAATTGATGTC+CGG | 0.499286 | 7_1:+58907324 | None:intergenic |
| TTGGAACGGCGTCGTTCCGC+CGG | 0.504624 | 7_1:-58907106 | Msa1026740:CDS |
| TGTCATTCGCTAATATAGTA+AGG | 0.506493 | 7_1:-58906966 | Msa1026740:CDS |
| TCTGGTCAAAGCAACATGTC+AGG | 0.508876 | 7_1:-58907174 | Msa1026740:CDS |
| GCGTGGAGAGGTTCGTGTGT+TGG | 0.516076 | 7_1:+58907030 | None:intergenic |
| AAAGTCTGCGGCATAGGTCC+TGG | 0.516246 | 7_1:-58906991 | Msa1026740:CDS |
| AGTGGCCGGGGTTTGAACCC+CGG | 0.517319 | 7_1:-58906023 | Msa1026740:three_prime_UTR |
| TGGGACTAGTCCCAATTGTC+CGG | 0.517619 | 7_1:+58906933 | None:intergenic |
| CTAGTCCCATGTGCCGTTGG+TGG | 0.522143 | 7_1:-58906919 | Msa1026740:CDS |
| GCCAAGAAAGTCTGCGGCAT+AGG | 0.523458 | 7_1:-58906997 | Msa1026740:CDS |
| CTTCAGCGCCAACCTCAAAT+GGG | 0.527712 | 7_1:-58907055 | Msa1026740:CDS |
| GCAATAAAGGAGTGGGCGCG+TGG | 0.530729 | 7_1:-58906892 | Msa1026740:CDS |
| TGTTGGTTCCCATTTGAGGT+TGG | 0.532979 | 7_1:+58907047 | None:intergenic |
| ATCCGGACATCAATTTATGT+TGG | 0.541386 | 7_1:-58907326 | Msa1026740:five_prime_UTR |
| AAGCGTAAGATGGAAGGATC+GGG | 0.547805 | 7_1:+58907075 | None:intergenic |
| GAAGGATCGGGACTGCACTC+CGG | 0.548904 | 7_1:+58907087 | None:intergenic |
| GTGATTTGCATTGATGCAAA+GGG | 0.550182 | 7_1:-58906424 | Msa1026740:CDS |
| GAGAACGAAAGAAAGCGTAA+AGG | 0.551514 | 7_1:-58906842 | Msa1026740:CDS |
| ATAGTAAGGCGGCACGTGGC+CGG | 0.552862 | 7_1:-58906952 | Msa1026740:CDS |
| GCGTCGATGTCGGCGTGGAG+AGG | 0.554701 | 7_1:+58907018 | None:intergenic |
| TGACAGAGGCACACTGACAC+AGG | 0.555084 | 7_1:+58906162 | None:intergenic |
| GTTGGCGCTGAAGCGTAAGA+TGG | 0.559331 | 7_1:+58907065 | None:intergenic |
| CAATAAAGGAGTGGGCGCGT+GGG | 0.560785 | 7_1:-58906891 | Msa1026740:CDS |
| ATTGGGTCACATGCTGGCTG+AGG | 0.563153 | 7_1:-58906350 | Msa1026740:CDS |
| GAAGCGTAAGATGGAAGGAT+CGG | 0.570705 | 7_1:+58907074 | None:intergenic |
| CAAAGCAACATGTCAGGTCG+TGG | 0.573742 | 7_1:-58907168 | Msa1026740:CDS |
| ATCACACTCCAAACAAGCGT+TGG | 0.574138 | 7_1:-58907125 | Msa1026740:CDS |
| ATAAAGAGTAATGCACATCC+GGG | 0.574689 | 7_1:+58906005 | None:intergenic |
| GCAGTGCCACCAACGGCACA+TGG | 0.576417 | 7_1:+58906913 | None:intergenic |
| GGACTAGTCCCATGTGCCGT+TGG | 0.578781 | 7_1:-58906922 | Msa1026740:CDS |
| GCGCTGAAGCGTAAGATGGA+AGG | 0.593787 | 7_1:+58907069 | None:intergenic |
| ACTCCAAACAAGCGTTGGAA+CGG | 0.595459 | 7_1:-58907120 | Msa1026740:CDS |
| TGTGATTTGCATTGATGCAA+AGG | 0.595582 | 7_1:-58906425 | Msa1026740:CDS |
| CTTTATTGCAGTGCCACCAA+CGG | 0.596666 | 7_1:+58906906 | None:intergenic |
| GCTGGAAGGTGAAGAAGCCA+TGG | 0.597692 | 7_1:-58907256 | Msa1026740:exon |
| AAAGTGAGAGAAGCGCAGAA+AGG | 0.599004 | 7_1:-58906463 | Msa1026740:CDS |
| CGCTTGTTTGGAGTGTGATG+AGG | 0.600754 | 7_1:+58907129 | None:intergenic |
| TGGCACTGCAATAAAGGAGT+GGG | 0.603954 | 7_1:-58906899 | Msa1026740:CDS |
| AATAAAGGAGTGGGCGCGTG+GGG | 0.607199 | 7_1:-58906890 | Msa1026740:CDS |
| ACAAACTTGCAAGAGCTGGA+AGG | 0.625609 | 7_1:-58907270 | Msa1026740:five_prime_UTR |
| GGATCGGGACTGCACTCCGG+CGG | 0.626973 | 7_1:+58907090 | None:intergenic |
| ATTAGGTAGCGCTAGCATCA+GGG | 0.627037 | 7_1:-58906501 | Msa1026740:intron |
| GACAGAGGCACACTGACACA+GGG | 0.632765 | 7_1:+58906163 | None:intergenic |
| GTGGCACTGCAATAAAGGAG+TGG | 0.636367 | 7_1:-58906900 | Msa1026740:CDS |
| AAATGATGTTACAGTGACAG+AGG | 0.657757 | 7_1:+58906148 | None:intergenic |
| CAGTGCCACCAACGGCACAT+GGG | 0.663086 | 7_1:+58906914 | None:intergenic |
| AGCAACATGTCAGGTCGTGG+CGG | 0.663192 | 7_1:-58907165 | Msa1026740:CDS |
| TAATATAGTAAGGCGGCACG+TGG | 0.666177 | 7_1:-58906956 | Msa1026740:CDS |
| AAAGTGAGTGGAAAATACAA+GGG | 0.678558 | 7_1:+58905977 | None:intergenic |
| ATATTAGCGAATGACATACC+AGG | 0.681514 | 7_1:+58906973 | None:intergenic |
| ATCGACGCCAAGAAAGTCTG+CGG | 0.687867 | 7_1:-58907003 | Msa1026740:CDS |
| TCTTGGCGTCGATGTCGGCG+TGG | 0.693622 | 7_1:+58907013 | None:intergenic |
| GTCGAGTGAACATGACGCAG+AGG | 0.698743 | 7_1:-58906764 | Msa1026740:CDS |
| TAAAGAGTAATGCACATCCG+GGG | 0.707669 | 7_1:+58906006 | None:intergenic |
| CATTCGCTAATATAGTAAGG+CGG | 0.726741 | 7_1:-58906963 | Msa1026740:CDS |
| ACATGTTGCTTTGACCAGAG+AGG | 0.734078 | 7_1:+58907178 | None:intergenic |
| AGAGGTTTACAAAGTCAACA+TGG | 0.736409 | 7_1:-58906746 | Msa1026740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTCTTATTTATTTGTTT+TGG | - | chr7_1:58906716-58906735 | Msa1026740:CDS | 15.0% |
| !!! | TAAATGATAATGTTGTTATT+AGG | - | chr7_1:58906791-58906810 | Msa1026740:CDS | 15.0% |
| !! | TTCTATTACCAAAAATAATA+TGG | - | chr7_1:58907005-58907024 | Msa1026740:CDS | 15.0% |
| !!! | GAATTAAACCATATTATTTT+TGG | + | chr7_1:58907016-58907035 | None:intergenic | 15.0% |
| !!! | AGTTTCTTATTTATTTGTTT+TGG | - | chr7_1:58906716-58906735 | Msa1026740:CDS | 15.0% |
| !!! | TAAATGATAATGTTGTTATT+AGG | - | chr7_1:58906791-58906810 | Msa1026740:CDS | 15.0% |
| !! | TTCTATTACCAAAAATAATA+TGG | - | chr7_1:58907005-58907024 | Msa1026740:CDS | 15.0% |
| !!! | GAATTAAACCATATTATTTT+TGG | + | chr7_1:58907016-58907035 | None:intergenic | 15.0% |
| !! | TTGAATTTGATGAATAGATT+GGG | - | chr7_1:58907200-58907219 | Msa1026740:CDS | 20.0% |
| !! | TTGAATTTGATGAATAGATT+GGG | - | chr7_1:58907200-58907219 | Msa1026740:CDS | 20.0% |
| !!! | ACGAACATTTTAGTACTAAT+AGG | + | chr7_1:58906684-58906703 | None:intergenic | 25.0% |
| ! | TGACGAAATTAGTAATTGAA+TGG | - | chr7_1:58906761-58906780 | Msa1026740:CDS | 25.0% |
| ! | TATTTACTCACGAGTATATA+TGG | - | chr7_1:58907095-58907114 | Msa1026740:CDS | 25.0% |
| ! | CTTGAATTTGATGAATAGAT+TGG | - | chr7_1:58907199-58907218 | Msa1026740:CDS | 25.0% |
| !!! | ACGAACATTTTAGTACTAAT+AGG | + | chr7_1:58906684-58906703 | None:intergenic | 25.0% |
| ! | TGACGAAATTAGTAATTGAA+TGG | - | chr7_1:58906761-58906780 | Msa1026740:CDS | 25.0% |
| ! | TATTTACTCACGAGTATATA+TGG | - | chr7_1:58907095-58907114 | Msa1026740:CDS | 25.0% |
| ! | CTTGAATTTGATGAATAGAT+TGG | - | chr7_1:58907199-58907218 | Msa1026740:CDS | 25.0% |
| !!! | AAGATGTGTCTTTTGGTTTT+GGG | + | chr7_1:58906108-58906127 | None:intergenic | 30.0% |
| TGTCATTCGCTAATATAGTA+AGG | - | chr7_1:58906343-58906362 | Msa1026740:CDS | 30.0% | |
| AGTAATTTACGAAAGAAACC+TGG | + | chr7_1:58906644-58906663 | None:intergenic | 30.0% | |
| ACAGAATCTCAGGTTAAATT+GGG | - | chr7_1:58906942-58906961 | Msa1026740:CDS | 30.0% | |
| !!! | GTCACTGTAACATCATTTTT+TGG | - | chr7_1:58907166-58907185 | Msa1026740:CDS | 30.0% |
| TCTCAAAACGTTTACATTAG+TGG | + | chr7_1:58907226-58907245 | None:intergenic | 30.0% | |
| TATAAAGAGTAATGCACATC+CGG | + | chr7_1:58907308-58907327 | None:intergenic | 30.0% | |
| !!! | AAGATGTGTCTTTTGGTTTT+GGG | + | chr7_1:58906108-58906127 | None:intergenic | 30.0% |
| TGTCATTCGCTAATATAGTA+AGG | - | chr7_1:58906343-58906362 | Msa1026740:CDS | 30.0% | |
| AGTAATTTACGAAAGAAACC+TGG | + | chr7_1:58906644-58906663 | None:intergenic | 30.0% | |
| ACAGAATCTCAGGTTAAATT+GGG | - | chr7_1:58906942-58906961 | Msa1026740:CDS | 30.0% | |
| !!! | GTCACTGTAACATCATTTTT+TGG | - | chr7_1:58907166-58907185 | Msa1026740:CDS | 30.0% |
| TCTCAAAACGTTTACATTAG+TGG | + | chr7_1:58907226-58907245 | None:intergenic | 30.0% | |
| TATAAAGAGTAATGCACATC+CGG | + | chr7_1:58907308-58907327 | None:intergenic | 30.0% | |
| ! | TGGATCTTTTTCCATTTCCA+TGG | + | chr7_1:58906073-58906092 | None:intergenic | 35.0% |
| !!! | GAAGATGTGTCTTTTGGTTT+TGG | + | chr7_1:58906109-58906128 | None:intergenic | 35.0% |
| ATATTAGCGAATGACATACC+AGG | + | chr7_1:58906339-58906358 | None:intergenic | 35.0% | |
| CATTCGCTAATATAGTAAGG+CGG | - | chr7_1:58906346-58906365 | Msa1026740:CDS | 35.0% | |
| GGAAGAACTGTACGAAAATA+TGG | - | chr7_1:58906440-58906459 | Msa1026740:CDS | 35.0% | |
| ! | AGAACGAAAGAAAGCGTAAA+GGG | - | chr7_1:58906468-58906487 | Msa1026740:CDS | 35.0% |
| AGAGGTTTACAAAGTCAACA+TGG | - | chr7_1:58906563-58906582 | Msa1026740:intron | 35.0% | |
| ACGAAAGAAACCTGGATTAT+TGG | + | chr7_1:58906636-58906655 | None:intergenic | 35.0% | |
| GCATCAATGCAAATCACATT+CGG | + | chr7_1:58906882-58906901 | None:intergenic | 35.0% | |
| ! | TGTGATTTGCATTGATGCAA+AGG | - | chr7_1:58906884-58906903 | Msa1026740:CDS | 35.0% |
| ! | GTGATTTGCATTGATGCAAA+GGG | - | chr7_1:58906885-58906904 | Msa1026740:CDS | 35.0% |
| CACAGAATCTCAGGTTAAAT+TGG | - | chr7_1:58906941-58906960 | Msa1026740:CDS | 35.0% | |
| AAATGATGTTACAGTGACAG+AGG | + | chr7_1:58907164-58907183 | None:intergenic | 35.0% | |
| ATAAAGAGTAATGCACATCC+GGG | + | chr7_1:58907307-58907326 | None:intergenic | 35.0% | |
| ! | TATCAACCCTTGTATTTTCC+CGG | - | chr7_1:58907326-58907345 | Msa1026740:five_prime_UTR | 35.0% |
| TGCCAACATAAATTGATGTC+CGG | + | chr7_1:58905988-58906007 | None:intergenic | 35.0% | |
| ! | TGGATCTTTTTCCATTTCCA+TGG | + | chr7_1:58906073-58906092 | None:intergenic | 35.0% |
| !!! | GAAGATGTGTCTTTTGGTTT+TGG | + | chr7_1:58906109-58906128 | None:intergenic | 35.0% |
| ATATTAGCGAATGACATACC+AGG | + | chr7_1:58906339-58906358 | None:intergenic | 35.0% | |
| CATTCGCTAATATAGTAAGG+CGG | - | chr7_1:58906346-58906365 | Msa1026740:CDS | 35.0% | |
| GGAAGAACTGTACGAAAATA+TGG | - | chr7_1:58906440-58906459 | Msa1026740:CDS | 35.0% | |
| ! | AGAACGAAAGAAAGCGTAAA+GGG | - | chr7_1:58906468-58906487 | Msa1026740:CDS | 35.0% |
| AGAGGTTTACAAAGTCAACA+TGG | - | chr7_1:58906563-58906582 | Msa1026740:intron | 35.0% | |
| ACGAAAGAAACCTGGATTAT+TGG | + | chr7_1:58906636-58906655 | None:intergenic | 35.0% | |
| GCATCAATGCAAATCACATT+CGG | + | chr7_1:58906882-58906901 | None:intergenic | 35.0% | |
| ! | TGTGATTTGCATTGATGCAA+AGG | - | chr7_1:58906884-58906903 | Msa1026740:CDS | 35.0% |
| ! | GTGATTTGCATTGATGCAAA+GGG | - | chr7_1:58906885-58906904 | Msa1026740:CDS | 35.0% |
| CACAGAATCTCAGGTTAAAT+TGG | - | chr7_1:58906941-58906960 | Msa1026740:CDS | 35.0% | |
| AAATGATGTTACAGTGACAG+AGG | + | chr7_1:58907164-58907183 | None:intergenic | 35.0% | |
| ATAAAGAGTAATGCACATCC+GGG | + | chr7_1:58907307-58907326 | None:intergenic | 35.0% | |
| !!! | CAGCTTTAAAACCCGCTTTT+TGG | + | chr7_1:58906019-58906038 | None:intergenic | 40.0% |
| !!! | ATGTGTCTTTTGGTTTTGGG+TGG | + | chr7_1:58906105-58906124 | None:intergenic | 40.0% |
| ! | GAGGATGAAGATGTGTCTTT+TGG | + | chr7_1:58906115-58906134 | None:intergenic | 40.0% |
| ! | GAGAACGAAAGAAAGCGTAA+AGG | - | chr7_1:58906467-58906486 | Msa1026740:CDS | 40.0% |
| !! | AAAGCGTTGCTTTGGTTTCA+AGG | - | chr7_1:58906510-58906529 | Msa1026740:intron | 40.0% |
| ACCTTCTCTTCCAATAATCC+AGG | - | chr7_1:58906623-58906642 | Msa1026740:intron | 40.0% | |
| ACCTGGATTATTGGAAGAGA+AGG | + | chr7_1:58906627-58906646 | None:intergenic | 40.0% | |
| TCACTTGAACACAGAATCTC+AGG | - | chr7_1:58906932-58906951 | Msa1026740:CDS | 40.0% | |
| !!! | TGTGTGCTGTCACTCTTTTT+TGG | - | chr7_1:58907262-58907281 | Msa1026740:five_prime_UTR | 40.0% |
| !!! | CTGTCACTCTTTTTTGGTAG+TGG | - | chr7_1:58907268-58907287 | Msa1026740:five_prime_UTR | 40.0% |
| TAAAGAGTAATGCACATCCG+GGG | + | chr7_1:58907306-58907325 | None:intergenic | 40.0% | |
| GCCAACATAAATTGATGTCC+GGG | + | chr7_1:58905987-58906006 | None:intergenic | 40.0% | |
| !!! | CAGCTTTAAAACCCGCTTTT+TGG | + | chr7_1:58906019-58906038 | None:intergenic | 40.0% |
| !!! | ATGTGTCTTTTGGTTTTGGG+TGG | + | chr7_1:58906105-58906124 | None:intergenic | 40.0% |
| ! | GAGGATGAAGATGTGTCTTT+TGG | + | chr7_1:58906115-58906134 | None:intergenic | 40.0% |
| ! | GAGAACGAAAGAAAGCGTAA+AGG | - | chr7_1:58906467-58906486 | Msa1026740:CDS | 40.0% |
| !! | AAAGCGTTGCTTTGGTTTCA+AGG | - | chr7_1:58906510-58906529 | Msa1026740:intron | 40.0% |
| ACCTTCTCTTCCAATAATCC+AGG | - | chr7_1:58906623-58906642 | Msa1026740:intron | 40.0% | |
| ACCTGGATTATTGGAAGAGA+AGG | + | chr7_1:58906627-58906646 | None:intergenic | 40.0% | |
| TCACTTGAACACAGAATCTC+AGG | - | chr7_1:58906932-58906951 | Msa1026740:CDS | 40.0% | |
| !!! | TGTGTGCTGTCACTCTTTTT+TGG | - | chr7_1:58907262-58907281 | Msa1026740:five_prime_UTR | 40.0% |
| !!! | CTGTCACTCTTTTTTGGTAG+TGG | - | chr7_1:58907268-58907287 | Msa1026740:five_prime_UTR | 40.0% |
| TAAAGAGTAATGCACATCCG+GGG | + | chr7_1:58907306-58907325 | None:intergenic | 40.0% | |
| ACAAACTTGCAAGAGCTGGA+AGG | - | chr7_1:58906039-58906058 | Msa1026740:three_prime_UTR | 45.0% | |
| AGGTGAAGAAGCCATGGAAA+TGG | - | chr7_1:58906059-58906078 | Msa1026740:three_prime_UTR | 45.0% | |
| !! | GTTTTGGGTGGATTCTCGTT+TGG | + | chr7_1:58906093-58906112 | None:intergenic | 45.0% |
| AGACACATCTTCATCCTCTC+TGG | - | chr7_1:58906117-58906136 | Msa1026740:three_prime_UTR | 45.0% | |
| !! | ACATGTTGCTTTGACCAGAG+AGG | + | chr7_1:58906134-58906153 | None:intergenic | 45.0% |
| TCTGGTCAAAGCAACATGTC+AGG | - | chr7_1:58906135-58906154 | Msa1026740:three_prime_UTR | 45.0% | |
| ATCACACTCCAAACAAGCGT+TGG | - | chr7_1:58906184-58906203 | Msa1026740:three_prime_UTR | 45.0% | |
| !! | ACTCCAAACAAGCGTTGGAA+CGG | - | chr7_1:58906189-58906208 | Msa1026740:three_prime_UTR | 45.0% |
| AAGCGTAAGATGGAAGGATC+GGG | + | chr7_1:58906237-58906256 | None:intergenic | 45.0% | |
| GAAGCGTAAGATGGAAGGAT+CGG | + | chr7_1:58906238-58906257 | None:intergenic | 45.0% | |
| !! | TGTTGGTTCCCATTTGAGGT+TGG | + | chr7_1:58906265-58906284 | None:intergenic | 45.0% |
| TAATATAGTAAGGCGGCACG+TGG | - | chr7_1:58906353-58906372 | Msa1026740:CDS | 45.0% | |
| CTTTATTGCAGTGCCACCAA+CGG | + | chr7_1:58906406-58906425 | None:intergenic | 45.0% | |
| TGGCACTGCAATAAAGGAGT+GGG | - | chr7_1:58906410-58906429 | Msa1026740:CDS | 45.0% | |
| !! | CAGAGATCAAAGCGTTGCTT+TGG | - | chr7_1:58906502-58906521 | Msa1026740:intron | 45.0% |
| TATTAGGTAGCGCTAGCATC+AGG | - | chr7_1:58906807-58906826 | Msa1026740:CDS | 45.0% | |
| ATTAGGTAGCGCTAGCATCA+GGG | - | chr7_1:58906808-58906827 | Msa1026740:CDS | 45.0% | |
| ! | AAAGTGAGAGAAGCGCAGAA+AGG | - | chr7_1:58906846-58906865 | Msa1026740:CDS | 45.0% |
| ! | AAGTGAGAGAAGCGCAGAAA+GGG | - | chr7_1:58906847-58906866 | Msa1026740:CDS | 45.0% |
| GGTTAAATTGGGTCACATGC+TGG | - | chr7_1:58906953-58906972 | Msa1026740:CDS | 45.0% | |
| !!! | CACTCTTTTTTGGTAGTGGC+CGG | - | chr7_1:58907272-58907291 | Msa1026740:five_prime_UTR | 45.0% |
| !!! | ACTCTTTTTTGGTAGTGGCC+GGG | - | chr7_1:58907273-58907292 | Msa1026740:five_prime_UTR | 45.0% |
| ACAAACTTGCAAGAGCTGGA+AGG | - | chr7_1:58906039-58906058 | Msa1026740:three_prime_UTR | 45.0% | |
| AGGTGAAGAAGCCATGGAAA+TGG | - | chr7_1:58906059-58906078 | Msa1026740:three_prime_UTR | 45.0% | |
| !! | GTTTTGGGTGGATTCTCGTT+TGG | + | chr7_1:58906093-58906112 | None:intergenic | 45.0% |
| AGACACATCTTCATCCTCTC+TGG | - | chr7_1:58906117-58906136 | Msa1026740:three_prime_UTR | 45.0% | |
| !! | ACATGTTGCTTTGACCAGAG+AGG | + | chr7_1:58906134-58906153 | None:intergenic | 45.0% |
| TCTGGTCAAAGCAACATGTC+AGG | - | chr7_1:58906135-58906154 | Msa1026740:three_prime_UTR | 45.0% | |
| ATCACACTCCAAACAAGCGT+TGG | - | chr7_1:58906184-58906203 | Msa1026740:three_prime_UTR | 45.0% | |
| !! | ACTCCAAACAAGCGTTGGAA+CGG | - | chr7_1:58906189-58906208 | Msa1026740:three_prime_UTR | 45.0% |
| AAGCGTAAGATGGAAGGATC+GGG | + | chr7_1:58906237-58906256 | None:intergenic | 45.0% | |
| GAAGCGTAAGATGGAAGGAT+CGG | + | chr7_1:58906238-58906257 | None:intergenic | 45.0% | |
| !! | TGTTGGTTCCCATTTGAGGT+TGG | + | chr7_1:58906265-58906284 | None:intergenic | 45.0% |
| TAATATAGTAAGGCGGCACG+TGG | - | chr7_1:58906353-58906372 | Msa1026740:CDS | 45.0% | |
| CTTTATTGCAGTGCCACCAA+CGG | + | chr7_1:58906406-58906425 | None:intergenic | 45.0% | |
| TGGCACTGCAATAAAGGAGT+GGG | - | chr7_1:58906410-58906429 | Msa1026740:CDS | 45.0% | |
| !! | CAGAGATCAAAGCGTTGCTT+TGG | - | chr7_1:58906502-58906521 | Msa1026740:intron | 45.0% |
| TATTAGGTAGCGCTAGCATC+AGG | - | chr7_1:58906807-58906826 | Msa1026740:CDS | 45.0% | |
| ATTAGGTAGCGCTAGCATCA+GGG | - | chr7_1:58906808-58906827 | Msa1026740:CDS | 45.0% | |
| ! | AAAGTGAGAGAAGCGCAGAA+AGG | - | chr7_1:58906846-58906865 | Msa1026740:CDS | 45.0% |
| ! | AAGTGAGAGAAGCGCAGAAA+GGG | - | chr7_1:58906847-58906866 | Msa1026740:CDS | 45.0% |
| GGTTAAATTGGGTCACATGC+TGG | - | chr7_1:58906953-58906972 | Msa1026740:CDS | 45.0% | |
| !!! | CACTCTTTTTTGGTAGTGGC+CGG | - | chr7_1:58907272-58907291 | Msa1026740:five_prime_UTR | 45.0% |
| !!! | ACTCTTTTTTGGTAGTGGCC+GGG | - | chr7_1:58907273-58907292 | Msa1026740:five_prime_UTR | 45.0% |
| GGCAGTTGCGTACCAAAAAG+CGG | - | chr7_1:58906004-58906023 | Msa1026740:three_prime_UTR | 50.0% | |
| GCAGTTGCGTACCAAAAAGC+GGG | - | chr7_1:58906005-58906024 | Msa1026740:three_prime_UTR | 50.0% | |
| GCTGACAAACTTGCAAGAGC+TGG | - | chr7_1:58906035-58906054 | Msa1026740:three_prime_UTR | 50.0% | |
| CAAAGCAACATGTCAGGTCG+TGG | - | chr7_1:58906141-58906160 | Msa1026740:three_prime_UTR | 50.0% | |
| ! | CGCTTGTTTGGAGTGTGATG+AGG | + | chr7_1:58906183-58906202 | None:intergenic | 50.0% |
| CTTCAGCGCCAACCTCAAAT+GGG | - | chr7_1:58906254-58906273 | Msa1026740:three_prime_UTR | 50.0% | |
| !! | CGTGTGTTGGTTCCCATTTG+AGG | + | chr7_1:58906269-58906288 | None:intergenic | 50.0% |
| !! | GACTTTCTTGGCGTCGATGT+CGG | + | chr7_1:58906304-58906323 | None:intergenic | 50.0% |
| ATCGACGCCAAGAAAGTCTG+CGG | - | chr7_1:58906306-58906325 | Msa1026740:three_prime_UTR | 50.0% | |
| ACCTATGCCGCAGACTTTCT+TGG | + | chr7_1:58906316-58906335 | None:intergenic | 50.0% | |
| !! | TGGGACTAGTCCCAATTGTC+CGG | + | chr7_1:58906379-58906398 | None:intergenic | 50.0% |
| !! | CGTTGGTGGCACTGCAATAA+AGG | - | chr7_1:58906404-58906423 | Msa1026740:CDS | 50.0% |
| GTGGCACTGCAATAAAGGAG+TGG | - | chr7_1:58906409-58906428 | Msa1026740:CDS | 50.0% | |
| !!! | CTCTTTTTTGGTAGTGGCCG+GGG | - | chr7_1:58907274-58907293 | Msa1026740:five_prime_UTR | 50.0% |
| GGCAGTTGCGTACCAAAAAG+CGG | - | chr7_1:58906004-58906023 | Msa1026740:three_prime_UTR | 50.0% | |
| GCAGTTGCGTACCAAAAAGC+GGG | - | chr7_1:58906005-58906024 | Msa1026740:three_prime_UTR | 50.0% | |
| GCTGACAAACTTGCAAGAGC+TGG | - | chr7_1:58906035-58906054 | Msa1026740:three_prime_UTR | 50.0% | |
| CAAAGCAACATGTCAGGTCG+TGG | - | chr7_1:58906141-58906160 | Msa1026740:three_prime_UTR | 50.0% | |
| ! | CGCTTGTTTGGAGTGTGATG+AGG | + | chr7_1:58906183-58906202 | None:intergenic | 50.0% |
| CTTCAGCGCCAACCTCAAAT+GGG | - | chr7_1:58906254-58906273 | Msa1026740:three_prime_UTR | 50.0% | |
| !! | CGTGTGTTGGTTCCCATTTG+AGG | + | chr7_1:58906269-58906288 | None:intergenic | 50.0% |
| !! | GACTTTCTTGGCGTCGATGT+CGG | + | chr7_1:58906304-58906323 | None:intergenic | 50.0% |
| ATCGACGCCAAGAAAGTCTG+CGG | - | chr7_1:58906306-58906325 | Msa1026740:three_prime_UTR | 50.0% | |
| ACCTATGCCGCAGACTTTCT+TGG | + | chr7_1:58906316-58906335 | None:intergenic | 50.0% | |
| !! | TGGGACTAGTCCCAATTGTC+CGG | + | chr7_1:58906379-58906398 | None:intergenic | 50.0% |
| !! | CGTTGGTGGCACTGCAATAA+AGG | - | chr7_1:58906404-58906423 | Msa1026740:CDS | 50.0% |
| GTGGCACTGCAATAAAGGAG+TGG | - | chr7_1:58906409-58906428 | Msa1026740:CDS | 50.0% | |
| !!! | CTCTTTTTTGGTAGTGGCCG+GGG | - | chr7_1:58907274-58907293 | Msa1026740:five_prime_UTR | 50.0% |
| GCTGGAAGGTGAAGAAGCCA+TGG | - | chr7_1:58906053-58906072 | Msa1026740:three_prime_UTR | 55.0% | |
| AGCAACATGTCAGGTCGTGG+CGG | - | chr7_1:58906144-58906163 | Msa1026740:three_prime_UTR | 55.0% | |
| ACGCCGTTCCAACGCTTGTT+TGG | + | chr7_1:58906195-58906214 | None:intergenic | 55.0% | |
| GCGCTGAAGCGTAAGATGGA+AGG | + | chr7_1:58906243-58906262 | None:intergenic | 55.0% | |
| ! | GTTGGCGCTGAAGCGTAAGA+TGG | + | chr7_1:58906247-58906266 | None:intergenic | 55.0% |
| GCTTCAGCGCCAACCTCAAA+TGG | - | chr7_1:58906253-58906272 | Msa1026740:three_prime_UTR | 55.0% | |
| GCCAAGAAAGTCTGCGGCAT+AGG | - | chr7_1:58906312-58906331 | Msa1026740:exon | 55.0% | |
| AAAGTCTGCGGCATAGGTCC+TGG | - | chr7_1:58906318-58906337 | Msa1026740:exon | 55.0% | |
| CAATAAAGGAGTGGGCGCGT+GGG | - | chr7_1:58906418-58906437 | Msa1026740:CDS | 55.0% | |
| AATAAAGGAGTGGGCGCGTG+GGG | - | chr7_1:58906419-58906438 | Msa1026740:CDS | 55.0% | |
| GTCGAGTGAACATGACGCAG+AGG | - | chr7_1:58906545-58906564 | Msa1026740:intron | 55.0% | |
| ! | ATTGGGTCACATGCTGGCTG+AGG | - | chr7_1:58906959-58906978 | Msa1026740:CDS | 55.0% |
| ! | GACAGAGGCACACTGACACA+GGG | + | chr7_1:58907149-58907168 | None:intergenic | 55.0% |
| ! | TGACAGAGGCACACTGACAC+AGG | + | chr7_1:58907150-58907169 | None:intergenic | 55.0% |
| GCTGGAAGGTGAAGAAGCCA+TGG | - | chr7_1:58906053-58906072 | Msa1026740:three_prime_UTR | 55.0% | |
| AGCAACATGTCAGGTCGTGG+CGG | - | chr7_1:58906144-58906163 | Msa1026740:three_prime_UTR | 55.0% | |
| ACGCCGTTCCAACGCTTGTT+TGG | + | chr7_1:58906195-58906214 | None:intergenic | 55.0% | |
| GCGCTGAAGCGTAAGATGGA+AGG | + | chr7_1:58906243-58906262 | None:intergenic | 55.0% | |
| ! | GTTGGCGCTGAAGCGTAAGA+TGG | + | chr7_1:58906247-58906266 | None:intergenic | 55.0% |
| GCTTCAGCGCCAACCTCAAA+TGG | - | chr7_1:58906253-58906272 | Msa1026740:three_prime_UTR | 55.0% | |
| GCCAAGAAAGTCTGCGGCAT+AGG | - | chr7_1:58906312-58906331 | Msa1026740:exon | 55.0% | |
| AAAGTCTGCGGCATAGGTCC+TGG | - | chr7_1:58906318-58906337 | Msa1026740:exon | 55.0% | |
| CAATAAAGGAGTGGGCGCGT+GGG | - | chr7_1:58906418-58906437 | Msa1026740:CDS | 55.0% | |
| AATAAAGGAGTGGGCGCGTG+GGG | - | chr7_1:58906419-58906438 | Msa1026740:CDS | 55.0% | |
| GTCGAGTGAACATGACGCAG+AGG | - | chr7_1:58906545-58906564 | Msa1026740:intron | 55.0% | |
| ! | ATTGGGTCACATGCTGGCTG+AGG | - | chr7_1:58906959-58906978 | Msa1026740:CDS | 55.0% |
| ! | GACAGAGGCACACTGACACA+GGG | + | chr7_1:58907149-58907168 | None:intergenic | 55.0% |
| ! | TGACAGAGGCACACTGACAC+AGG | + | chr7_1:58907150-58907169 | None:intergenic | 55.0% |
| GAAGGATCGGGACTGCACTC+CGG | + | chr7_1:58906225-58906244 | None:intergenic | 60.0% | |
| GCGTGGAGAGGTTCGTGTGT+TGG | + | chr7_1:58906282-58906301 | None:intergenic | 60.0% | |
| ATAGTAAGGCGGCACGTGGC+CGG | - | chr7_1:58906357-58906376 | Msa1026740:CDS | 60.0% | |
| !! | GGACTAGTCCCATGTGCCGT+TGG | - | chr7_1:58906387-58906406 | Msa1026740:CDS | 60.0% |
| ! | CTAGTCCCATGTGCCGTTGG+TGG | - | chr7_1:58906390-58906409 | Msa1026740:CDS | 60.0% |
| CAGTGCCACCAACGGCACAT+GGG | + | chr7_1:58906398-58906417 | None:intergenic | 60.0% | |
| GCAATAAAGGAGTGGGCGCG+TGG | - | chr7_1:58906417-58906436 | Msa1026740:CDS | 60.0% | |
| CACATCCGGGGTTCAAACCC+CGG | + | chr7_1:58907294-58907313 | None:intergenic | 60.0% | |
| GAAGGATCGGGACTGCACTC+CGG | + | chr7_1:58906225-58906244 | None:intergenic | 60.0% | |
| GCGTGGAGAGGTTCGTGTGT+TGG | + | chr7_1:58906282-58906301 | None:intergenic | 60.0% | |
| ATAGTAAGGCGGCACGTGGC+CGG | - | chr7_1:58906357-58906376 | Msa1026740:CDS | 60.0% | |
| !! | GGACTAGTCCCATGTGCCGT+TGG | - | chr7_1:58906387-58906406 | Msa1026740:CDS | 60.0% |
| ! | CTAGTCCCATGTGCCGTTGG+TGG | - | chr7_1:58906390-58906409 | Msa1026740:CDS | 60.0% |
| CAGTGCCACCAACGGCACAT+GGG | + | chr7_1:58906398-58906417 | None:intergenic | 60.0% | |
| GCAATAAAGGAGTGGGCGCG+TGG | - | chr7_1:58906417-58906436 | Msa1026740:CDS | 60.0% | |
| CACATCCGGGGTTCAAACCC+CGG | + | chr7_1:58907294-58907313 | None:intergenic | 60.0% | |
| TTGGAACGGCGTCGTTCCGC+CGG | - | chr7_1:58906203-58906222 | Msa1026740:three_prime_UTR | 65.0% | |
| !! | TCTTGGCGTCGATGTCGGCG+TGG | + | chr7_1:58906299-58906318 | None:intergenic | 65.0% |
| CGGCACGTGGCCGGACAATT+GGG | - | chr7_1:58906366-58906385 | Msa1026740:CDS | 65.0% | |
| GCAGTGCCACCAACGGCACA+TGG | + | chr7_1:58906399-58906418 | None:intergenic | 65.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr7_1:58907286-58907305 | Msa1026740:five_prime_UTR | 65.0% | |
| TTGGAACGGCGTCGTTCCGC+CGG | - | chr7_1:58906203-58906222 | Msa1026740:three_prime_UTR | 65.0% | |
| !! | TCTTGGCGTCGATGTCGGCG+TGG | + | chr7_1:58906299-58906318 | None:intergenic | 65.0% |
| CGGCACGTGGCCGGACAATT+GGG | - | chr7_1:58906366-58906385 | Msa1026740:CDS | 65.0% | |
| GCAGTGCCACCAACGGCACA+TGG | + | chr7_1:58906399-58906418 | None:intergenic | 65.0% | |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr7_1:58907286-58907305 | Msa1026740:five_prime_UTR | 65.0% | |
| GGATCGGGACTGCACTCCGG+CGG | + | chr7_1:58906222-58906241 | None:intergenic | 70.0% | |
| ! | GCGTCGATGTCGGCGTGGAG+AGG | + | chr7_1:58906294-58906313 | None:intergenic | 70.0% |
| GCGGCACGTGGCCGGACAAT+TGG | - | chr7_1:58906365-58906384 | Msa1026740:CDS | 70.0% | |
| GGATCGGGACTGCACTCCGG+CGG | + | chr7_1:58906222-58906241 | None:intergenic | 70.0% | |
| ! | GCGTCGATGTCGGCGTGGAG+AGG | + | chr7_1:58906294-58906313 | None:intergenic | 70.0% |
| GCGGCACGTGGCCGGACAAT+TGG | - | chr7_1:58906365-58906384 | Msa1026740:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 58905986 | 58907345 | 58905986 | ID=Msa1026740;Name=Msa1026740 |
| chr7_1 | mRNA | 58905986 | 58907345 | 58905986 | ID=Msa1026740-mRNA-1;Parent=Msa1026740;Name=Msa1026740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=86|1|1|1|1|1|2|341|254 |
| chr7_1 | exon | 58905986 | 58906518 | 58905986 | ID=Msa1026740-mRNA-1:exon:11833;Parent=Msa1026740-mRNA-1 |
| chr7_1 | exon | 58906687 | 58907345 | 58906687 | ID=Msa1026740-mRNA-1:exon:11832;Parent=Msa1026740-mRNA-1 |
| chr7_1 | five_prime_UTR | 58907260 | 58907345 | 58907260 | ID=Msa1026740-mRNA-1:five_prime_utr;Parent=Msa1026740-mRNA-1 |
| chr7_1 | CDS | 58906687 | 58907259 | 58906687 | ID=Msa1026740-mRNA-1:cds;Parent=Msa1026740-mRNA-1 |
| chr7_1 | CDS | 58906327 | 58906518 | 58906327 | ID=Msa1026740-mRNA-1:cds;Parent=Msa1026740-mRNA-1 |
| chr7_1 | three_prime_UTR | 58905986 | 58906326 | 58905986 | ID=Msa1026740-mRNA-1:three_prime_utr;Parent=Msa1026740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
