AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0168690


Find 356 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr1_4 gene 51539680 51546665 51539680 ID=Msa0168690;Name=Msa0168690
chr1_4 mRNA 51539680 51546665 51539680 ID=Msa0168690-mRNA-1;Parent=Msa0168690;Name=Msa0168690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0.4|0.8|1|1|5|268|1846
chr1_4 exon 51539680 51541018 51539680 ID=Msa0168690-mRNA-1:exon:15181;Parent=Msa0168690-mRNA-1
chr1_4 exon 51541201 51545411 51541201 ID=Msa0168690-mRNA-1:exon:15180;Parent=Msa0168690-mRNA-1
chr1_4 exon 51546145 51546334 51546145 ID=Msa0168690-mRNA-1:exon:15179;Parent=Msa0168690-mRNA-1
chr1_4 exon 51546502 51546566 51546502 ID=Msa0168690-mRNA-1:exon:15178;Parent=Msa0168690-mRNA-1
chr1_4 exon 51546662 51546665 51546662 ID=Msa0168690-mRNA-1:exon:15177;Parent=Msa0168690-mRNA-1
chr1_4 CDS 51546662 51546665 51546662 ID=Msa0168690-mRNA-1:cds;Parent=Msa0168690-mRNA-1
chr1_4 CDS 51546502 51546566 51546502 ID=Msa0168690-mRNA-1:cds;Parent=Msa0168690-mRNA-1
chr1_4 CDS 51546145 51546334 51546145 ID=Msa0168690-mRNA-1:cds;Parent=Msa0168690-mRNA-1
chr1_4 CDS 51541201 51545411 51541201 ID=Msa0168690-mRNA-1:cds;Parent=Msa0168690-mRNA-1
chr1_4 CDS 51539948 51541018 51539948 ID=Msa0168690-mRNA-1:cds;Parent=Msa0168690-mRNA-1
chr1_4 three_prime_UTR 51539680 51539947 51539680 ID=Msa0168690-mRNA-1:three_prime_utr;Parent=Msa0168690-mRNA-1
Gene Sequence

>Msa0168690

ATGGCATATCAGAATTTTGTTCATTCAGTTTTGGAATTTGAGAAAGAAAATCCAAGTTCAACCAATCAGTCAGAAGCATATGAAGGTTTTGCCTCTTCATGTCTTTCAAGGATTAATAAAGTACTTACAACAATAGAACAGAAAGCGGTGATGGCGGCGGCGACTCGGTCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCTAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGATATGGATGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCGGAAATGTACTATAAAAAGCGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGCGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCTCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCTGTTATGATCACAGACGATTTACCAATGGTTACTTCCATGGAGACTGAGCCACGTACTCCAGAAACACGCCATCCTTCACGTACATTTCTGGACTCAGATGAATCAGAAAAAGATGCTCATTTTATCAAAAGAAATGGAGCAGATAGTGAAGAACCTAATTCTGCTTTGAACAAGACAGGTTTAAGACAGCTCAATGATCTCCTCATCCCTCGAGAACATCCAAAGTTTGAAGGGCATGCTCGAAGGGGGCTCAATTTTTTAGAGACGCAGGAGGACAGTAGTGAGCTAAACAATGGAGGCCGTGGCACTAAGGCTCGTGTCTTGTCTGAGTCTGAATGCGTGACAAAAGCGGAGGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTGGAAGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTCTCAAAGAGTCGATGAACGAGCAAGCAAAGCAGAAGCTGAAGTTCGAGACTTGAAGGAAGCGGTAGTCAAATTACAGGCTGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACCAATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAGTTTAACGAGCGTGCTACTAGAGCTGAAACTGAAGTTGAGTCCTTGAAGCAGGACCTTGTTCGAGTAGAAGCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAGTGCTCGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAATGTTAGAAGGATCAATGAGCAAGCTAATTTAGCTGAAAATGAAATTGAAGCTTTGAAGTTGGAAGTTACTGAACTTAATGAAGAGAAGGAAGATGCTGCTCTCCGATATCAGCAATGCTTGGAGATAATTTCCAGTCTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGACGATGAGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTCTTCTTTTGGAAACATCGAATCATGCTCTACAGTCTGAATTACAGTCTTTGGCACACAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGAAAGAACTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGAACTTAGAGCTCTTGCTGCTGACTTTCACAGTAAAGTGGAAATACTAGGGAATGTTGAATCACGTAAACAGTCTCTAGAGGATGAAGTGCACAGATTCAATGAGGAAAACAAAATTCTAAATGAGCTCAAGATTTCTTCATCTTTGTCTATACAAACTTTGCAGGATGAGATATTGAATTTGAAAGAGAAAATAGAGAAACTTGAACAGGAGGTTGAACTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATATGAATAAAAAACATGAAGCTATGATTGACGAGGTCAGGTCAGCTGATTTAGATCCACAATGCTTTGGCTCATCGGTGAAACAATTGCAAGACGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGAAAAAGATGAGAAACTGGCTCTTATGGTAAAATTGGAAACCATGGAGAAGCTTTTGGAGAAAAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAAGTAAATGTGTTGGAAGGAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAATTACAAGCCACAACTGAAAAGCTCGAGAAGTTCTCGGAAAATAACAACCTTTTGGAAAATTCACTATTTGATGTCAGTACCGAACTTGATGTACTAAGAGGGAAGTCAAAGATCTTAGAAGACGCGTGCCAGTTACTTGACCATGAGAAGTCCAGCATCTTTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACCCAGAAAATTCTGAAAGATCTTGAAAAACAACACAGTGAATTGGAACTAATGCATTTGGAACTAAAAGGAGAAAGGGAGTCGTCACTTAAAAAGGTAGAAGAGCTACTGGTTTCTCTATATTCCCAAAGGGAAGAGCATTGCAGAGTTTTGAAGTTGAATGAAGATGAAGTGGCCAACAAGGAATTACAAATTGATATTCTGAAAGAAGATGCAAAGTGCCGGAAACAAGAATATGAGGAGGAACTGGATAGATCACTAAACGCTCAGATTGAAATTTTCATCTTGCAGAAGTGTATCCAAGATTTGGAGAAAAGGAACTTTTCCCTTCTAGTTGAGTGCCAGAGACTTTTGGAGGCGTCCAAAATGTCTGACAAAATCATTTCTAAATTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTCTGTCTGAGAAAATTAAAATACTAAGGGTTGGGCTGCATCAGGTGTTGAAGACTCTTGACATTAACGGCGAGAATTTCTTTCAAGACATGCTTGACGAAGACCGAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAGAAGTCTTTTGACACGATTTTCAAGGAAAGCCACCACTTGGCCGTTGAGAATTCAGTTCTGATTACATTTCTTGAGCAGTTGAGACTGACTGTAGAAAATCTTGTGATAGAAAAAGGAGCACTTGATGAGGAGTCCAGGTTACAGTCTAAGCAGTTCATGGCATTGCAAATTGAATTCCAAAAGGCATTGGAAAAGAATCAGGAGTTGAAGTTGGCCATAAGCAAAGGAGAAGAGAGAATGGAAGGTATGACAACTGAGATAGTTAATCTACACGAAGAGCTATCAAACTTTGAAAAGATCCACAGCAACTTACAGGAAAAAAGTTGCACGATACTTGAAGAGAAAAAATCCTTGATGGGAAGATTTAAAGATCTGAGTGAGGAGAAGAGTAACTTGGAAGAAGAAATTTGTCTCCTGTCCCACGAGACATTCGTTCAATCTAATATTTCTGCGGTTTACCAGAATATTATCTCTGAAAAACTCCTGGAACTTAAACAGCTTGGTCAAGAACTTCATAAGCTCGGTTCAGAAAATAATAACCTTGAGGAGAGATTGAAGATAATGGCACACAAATTAGAAAATGCAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTAAAGTCAAATGTTGAATTGAATTTAGTTGAATCTGTCAATGATCAATTGACTTGTCAGATTAGGAATGAAAGGGAAATGTTGAGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACAGAGAAAACAGAATTGGAAAGAACGGTGGAAGATCTGAAGATTCGATATGATGATACCAAGGGGAAACTTGAAGAGCAAGCTAATCAAATTTCCCACTTGTCCTCAGACAAGGACCGTCAGAATGAAGAGCTTGGATGCCTTAGTGAAGTGAACCAGAAATTGGAGTCTGAAACGAAGTGCCTACACCAAGAACTTGAAGAAACTAAGCTGAGGGAAAAGAAGCTAAGTTATGAAGTACATGAAGGAATAAATGAGATTGAACAATGGGAAACTCAGGCTGCAGCACTATATGCTGAGCTGCAGGTTTCTGCTGTCAATGAAACACTATTTGAAGGGAAGGCCTGTGAGCTAGCTGGTACATGCCAGGATCTTGAGAACATAAACTGCTCGAAAGACATGGAAAGTGAACAGCTGAAAGAATTAGTTGGCAAGTTGGAAGGTGAAAATGGGAGACTGTGTGAGCAATTAGCTGCTTATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTAACATCTCTGGAGGTGCAGACTCTTGGGCATCCAAAACATCATGACTATGAAAAACCTGAGGTTAAAAATTTGGTGAATCACCAATACATTGAAAATGGTCAACAAATAGATGAAGATCAATCTGTTACGGCACCAGATCCTCTCCTCGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAATTTTAACGCAAGTTCCAAAGCCAATGTTGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAAATGGGGAGTTTAAGGCCAGATAATCCTGTAACTGAGATTGAAGTACTTCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATATGGAGTAAGCAGGGGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACATCTGATAAGACACAGAAGATGGCGGCAGAACCGGCAGAAGATCATCATCAAAGAAGAGCATCCAAGGAAACATACAACAAACATCCTTCAGGAGATTCCTTGGTGGAAAAGGAGTTGGGGGTGGACAAGTTAGAAATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGGCAACAAGAGTAGGGTTTTGGAAAGACTTGATTCTGATTCACAGAAGTTAACGAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTATTGAGAAGAGTACAAAGGGAAAAAGTGCCGAGTATGATACCGTTAAAGAGCAGCTTGAAGCGTCTCAGGAGACTGTAATGAAGTTGTTCGATGCTAACCGCAAGCTGGTGAAGAATGTAGAAGAAGGTGCACTATCTTCAGCTGAGAGAGCTTCATCAGAATCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCGGAACAAGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAGGTTCAAAGACTTCAGTTTCTTCTTTTGAAACTCAATGATGCAAAAGAAAGCAAAGAGAAAACCAAAATGGCCGATCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGCGACAAAAACCAACAACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGGCCACCCACTAAGGGTGATTGA

Protein sequence

>Msa0168690

MAYQNFVHSVLEFEKENPSSTNQSEAYEGFASSCLSRINKVLTTIEQKAVMAAATRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPVMITDDLPMVTSMETEPRTPETRHPSRTFLDSDESEKDAHFIKRNGADSEEPNSALNKTGLRQLNDLLIPREHPKFEGHARRGLNFLETQEDSSELNNGGRGTKARVLSESECVTKAEAEISALKKALAKLEDEKEAGLLQYQQSLEKLSNLELEVSSAQENSQRVDERASKAEAEVRDLKEAVVKLQAEREATLLQYQECLEKITNLEKNISFAQKDAGEFNERATRAETEVESLKQDLVRVEAEKEAALVQYKQCSETLSKLEERLKESEENVRRINEQANLAENEIEALKLEVTELNEEKEDAALRYQQCLEIISSLEHKLSCAEEEVRRLNSKIDDEVEKLHSSEQKCLLLETSNHALQSELQSLAHKMGSQSEELNEKQKELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEELRALAADFHSKVEILGNVESRKQSLEDEVHRFNEENKILNELKISSSLSIQTLQDEILNLKEKIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHEAMIDEVRSADLDPQCFGSSVKQLQDENSKLKETCEAEKDEKLALMVKLETMEKLLEKNSVLENSISDLNAELDSVRGKVNVLEGTCQSLLVEKSTLAAEKATLFSQLQATTEKLEKFSENNNLLENSLFDVSTELDVLRGKSKILEDACQLLDHEKSSIFSEKEALVSELNTTQKILKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVLKLNEDEVANKELQIDILKEDAKCRKQEYEEELDRSLNAQIEIFILQKCIQDLEKRNFSLLVECQRLLEASKMSDKIISKLETENIQKQDDVDSLSEKIKILRVGLHQVLKTLDINGENFFQDMLDEDRTLLNHIHGKLKERKKSFDTIFKESHHLAVENSVLITFLEQLRLTVENLVIEKGALDEESRLQSKQFMALQIEFQKALEKNQELKLAISKGEERMEGMTTEIVNLHEELSNFEKIHSNLQEKSCTILEEKKSLMGRFKDLSEEKSNLEEEICLLSHETFVQSNISAVYQNIISEKLLELKQLGQELHKLGSENNNLEERLKIMAHKLENAEMENSHLKELFVKSNVELNLVESVNDQLTCQIRNEREMLSQKEKVLSEAAKTFHALHTEKTELERTVEDLKIRYDDTKGKLEEQANQISHLSSDKDRQNEELGCLSEVNQKLESETKCLHQELEETKLREKKLSYEVHEGINEIEQWETQAAALYAELQVSAVNETLFEGKACELAGTCQDLENINCSKDMESEQLKELVGKLEGENGRLCEQLAAYVPAISALNDCVTSLEVQTLGHPKHHDYEKPEVKNLVNHQYIENGQQIDEDQSVTAPDPLLDFQDLQRRINEISMAVKNFNASSKANVEMREIQEAKEIEQKMGSLRPDNPVTEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKMAAEPAEDHHQRRASKETYNKHPSGDSLVEKELGVDKLEISRRMSRPREEGNKSRVLERLDSDSQKLTNLQITIQDLMKKVETIEKSTKGKSAEYDTVKEQLEASQETVMKLFDANRKLVKNVEEGALSSAERASSESDEIGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDAKESKEKTKMADQSRRVRLRDYLYGATKTNNQKKKKTPFCACVRPPTKGD*