Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237080 | XP_003593967.2 | 91.546 | 485 | 8 | 3 | 1 | 465 | 228 | 699 | 0.0 | 892 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237080 | sp|Q75LJ4|ACBP6_ORYSJ | 36.181 | 199 | 122 | 3 | 1 | 198 | 324 | 518 | 2.14e-30 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237080 | G7IQ00 | 91.546 | 485 | 8 | 3 | 1 | 465 | 228 | 699 | 0.0 | 892 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0195010 | Msa0237080 | 0.817315 | 3.513845e-52 | -8.615850e-47 |
| Msa0225460 | Msa0237080 | 0.829714 | 4.411386e-55 | -8.615850e-47 |
| Msa0225680 | Msa0237080 | 0.827135 | 1.849410e-54 | -8.615850e-47 |
| Msa0237080 | Msa0267110 | 0.803263 | 3.788889e-49 | -8.615850e-47 |
| Msa0237080 | Msa0274680 | 0.851673 | 7.612905e-61 | -8.615850e-47 |
| Msa0237080 | Msa0277180 | 0.804294 | 2.314805e-49 | -8.615850e-47 |
| Msa0237080 | Msa0298500 | 0.806584 | 7.663606e-50 | -8.615850e-47 |
| Msa0237080 | Msa0336410 | 0.835182 | 1.947579e-56 | -8.615850e-47 |
| Msa0237080 | Msa0410500 | 0.805963 | 1.035858e-49 | -8.615850e-47 |
| Msa0237080 | Msa0417880 | 0.801952 | 7.062432e-49 | -8.615850e-47 |
| Msa0237080 | Msa0527860 | 0.810015 | 1.422339e-50 | -8.615850e-47 |
| Msa0237080 | Msa0569200 | 0.800181 | 1.625847e-48 | -8.615850e-47 |
| Msa0237080 | Msa0574890 | 0.818293 | 2.114396e-52 | -8.615850e-47 |
| Msa0237080 | Msa0582450 | 0.815353 | 9.657328e-52 | -8.615850e-47 |
| Msa0237080 | Msa0586190 | 0.817499 | 3.194608e-52 | -8.615850e-47 |
| Msa0237080 | Msa0664060 | 0.808104 | 3.647862e-50 | -8.615850e-47 |
| Msa0237080 | Msa0754520 | 0.801815 | 7.536452e-49 | -8.615850e-47 |
| Msa0237080 | Msa0801210 | 0.829731 | 4.368003e-55 | -8.615850e-47 |
| Msa0237080 | Msa0833220 | 0.807177 | 5.740257e-50 | -8.615850e-47 |
| Msa0237080 | Msa0839560 | 0.801506 | 8.721423e-49 | -8.615850e-47 |
| Msa0237080 | Msa0930780 | 0.820263 | 7.522640e-53 | -8.615850e-47 |
| Msa0237080 | Msa0968670 | 0.848804 | 4.853409e-60 | -8.615850e-47 |
| Msa0237080 | Msa1029250 | 0.802359 | 5.825038e-49 | -8.615850e-47 |
| Msa0237080 | Msa1113340 | 0.825785 | 3.878635e-54 | -8.615850e-47 |
| Msa0237080 | Msa1122030 | 0.803974 | 2.698137e-49 | -8.615850e-47 |
| Msa0237080 | Msa1157870 | 0.816474 | 5.427027e-52 | -8.615850e-47 |
| Msa0237080 | Msa1232710 | 0.817990 | 2.475265e-52 | -8.615850e-47 |
| Msa0237080 | Msa1269480 | 0.816335 | 5.831039e-52 | -8.615850e-47 |
| Msa0237080 | Msa1274060 | 0.816729 | 4.758239e-52 | -8.615850e-47 |
| Msa0237080 | Msa1274280 | 0.813095 | 3.044466e-51 | -8.615850e-47 |
| Msa0237080 | Msa1307570 | 0.806255 | 8.988009e-50 | -8.615850e-47 |
| Msa0237080 | Msa1313300 | 0.816544 | 5.236318e-52 | -8.615850e-47 |
| Msa0237080 | Msa1422420 | 0.814180 | 1.756733e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237080 | MtrunA17_Chr2g0286241 | 91.546 | 485 | 8 | 3 | 1 | 465 | 228 | 699 | 0.0 | 892 |
| Msa0237080 | MtrunA17_Chr4g0066851 | 69.184 | 490 | 120 | 8 | 1 | 465 | 236 | 719 | 0.0 | 657 |
| Msa0237080 | MtrunA17_Chr7g0272641 | 37.342 | 158 | 99 | 0 | 1 | 158 | 323 | 480 | 3.62e-30 | 124 |
| Msa0237080 | MtrunA17_Chr1g0197401 | 36.709 | 158 | 100 | 0 | 1 | 158 | 170 | 327 | 9.10e-27 | 112 |
| Msa0237080 | MtrunA17_Chr1g0192821 | 37.719 | 114 | 68 | 2 | 1 | 111 | 107 | 220 | 4.26e-16 | 80.9 |
| Msa0237080 | MtrunA17_Chr1g0192821 | 32.692 | 156 | 94 | 4 | 5 | 157 | 11 | 158 | 2.73e-14 | 75.1 |
| Msa0237080 | MtrunA17_Chr1g0192821 | 35.714 | 112 | 70 | 2 | 1 | 111 | 160 | 270 | 6.24e-13 | 70.9 |
| Msa0237080 | MtrunA17_Chr4g0061581 | 33.071 | 127 | 76 | 3 | 1 | 119 | 57 | 182 | 2.82e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237080 | AT5G18590.2 | 55.070 | 503 | 175 | 10 | 1 | 464 | 218 | 708 | 3.40e-168 | 491 |
| Msa0237080 | AT5G18590.1 | 55.070 | 503 | 175 | 10 | 1 | 464 | 218 | 708 | 3.40e-168 | 491 |
| Msa0237080 | AT3G05420.2 | 36.076 | 158 | 101 | 0 | 1 | 158 | 326 | 483 | 5.58e-30 | 124 |
| Msa0237080 | AT5G27630.3 | 36.709 | 158 | 100 | 0 | 1 | 158 | 326 | 483 | 5.99e-30 | 123 |
| Msa0237080 | AT3G05420.1 | 36.076 | 158 | 101 | 0 | 1 | 158 | 325 | 482 | 6.10e-30 | 123 |
| Msa0237080 | AT5G27630.4 | 36.709 | 158 | 100 | 0 | 1 | 158 | 326 | 483 | 7.30e-30 | 123 |
| Msa0237080 | AT5G27630.1 | 36.709 | 158 | 100 | 0 | 1 | 158 | 326 | 483 | 7.42e-30 | 123 |
| Msa0237080 | AT5G27630.2 | 32.979 | 188 | 126 | 0 | 1 | 188 | 326 | 513 | 9.75e-30 | 122 |
| Msa0237080 | AT5G04420.2 | 32.955 | 176 | 115 | 1 | 1 | 176 | 183 | 355 | 7.91e-24 | 104 |
| Msa0237080 | AT5G04420.1 | 32.955 | 176 | 115 | 1 | 1 | 176 | 183 | 355 | 7.91e-24 | 104 |
| Msa0237080 | AT5G04420.3 | 32.955 | 176 | 115 | 1 | 1 | 176 | 183 | 355 | 7.91e-24 | 104 |
Find 96 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTCCTCCATATTGATTT+TGG | 0.161780 | 2_2:+10154490 | None:intergenic |
| TCCTCCCTGATAACAAAATT+TGG | 0.178023 | 2_2:-10154317 | Msa0237080:CDS |
| AGGAATTTCTTGTTGCATTT+GGG | 0.232869 | 2_2:-10155991 | Msa0237080:CDS |
| TATTACTATTAGGACATATA+TGG | 0.234014 | 2_2:-10153223 | Msa0237080:three_prime_UTR |
| CATTAACACTGCATCTTTAG+AGG | 0.255692 | 2_2:+10153162 | None:intergenic |
| GATAACAAAATTTGGCATTC+TGG | 0.261465 | 2_2:-10154309 | Msa0237080:CDS |
| AAGGAATTTCTTGTTGCATT+TGG | 0.266568 | 2_2:-10155992 | Msa0237080:CDS |
| CAATATGGAGGAACAGGTTT+TGG | 0.276025 | 2_2:-10154483 | Msa0237080:CDS |
| GGTACTAGTCGGTTGTCTTC+TGG | 0.281071 | 2_2:+10155816 | None:intergenic |
| TCTCTGTTCGTACAAGATTC+TGG | 0.339134 | 2_2:-10155649 | Msa0237080:CDS |
| ACAAAGCTCATATTACTATT+AGG | 0.343163 | 2_2:-10153233 | Msa0237080:three_prime_UTR |
| ATGCAGTGTTAATGCATTAC+TGG | 0.349305 | 2_2:-10153153 | Msa0237080:three_prime_UTR |
| TGATAGGATTGACAGGCATT+TGG | 0.374528 | 2_2:-10155563 | Msa0237080:CDS |
| AAATAAAATGTTCACCTTGT+TGG | 0.379564 | 2_2:+10156412 | None:intergenic |
| TCTAAAATCTCATTTCTGTA+TGG | 0.380222 | 2_2:+10153091 | None:intergenic |
| TGCACATGAAAAGGTTTCCT+TGG | 0.387981 | 2_2:+10153315 | None:intergenic |
| CATGATCAAATTGACTGTTA+TGG | 0.389822 | 2_2:+10155605 | None:intergenic |
| CTCGTGTGCATCTGATATCC+AGG | 0.391162 | 2_2:+10154518 | None:intergenic |
| GGCACTAAGTGGTATATTAC+AGG | 0.393302 | 2_2:-10156808 | Msa0237080:CDS |
| CAAAATCAATATGGAGGAAC+AGG | 0.395128 | 2_2:-10154489 | Msa0237080:CDS |
| CGGAGTGGACAATGTTAGAT+AGG | 0.395718 | 2_2:+10154114 | None:intergenic |
| AAGTATAGATCCTGGACCTT+TGG | 0.407645 | 2_2:+10155795 | None:intergenic |
| TGGCATTCTGGAAGCACAAT+TGG | 0.415991 | 2_2:-10154297 | Msa0237080:CDS |
| AAGAATTCAATGTAGATGAT+AGG | 0.423853 | 2_2:-10155579 | Msa0237080:CDS |
| ATGTTCAAGCCTTACATTGT+CGG | 0.432027 | 2_2:+10154094 | None:intergenic |
| ACACCTCATTGCACATGAAA+AGG | 0.437302 | 2_2:+10153306 | None:intergenic |
| GATGCCACGTGGTTGAATCT+TGG | 0.440918 | 2_2:+10157076 | None:intergenic |
| GAGAGGAGCCAAAATCAATA+TGG | 0.441578 | 2_2:-10154498 | Msa0237080:CDS |
| CCTTGTGCTGCACAAGGACC+AGG | 0.446536 | 2_2:+10156017 | None:intergenic |
| GATGGCATGGTCAAGAATAA+AGG | 0.449810 | 2_2:-10156881 | Msa0237080:CDS |
| CCTGAAAACATAAATTCATC+AGG | 0.456851 | 2_2:-10154389 | Msa0237080:CDS |
| CAAACAGAGACTGCAATCAA+TGG | 0.463940 | 2_2:-10153355 | Msa0237080:CDS |
| TTGTCCACTCCGACAATGTA+AGG | 0.465835 | 2_2:-10154103 | Msa0237080:CDS |
| TTCTGAAAGGAAATCTTTGT+CGG | 0.471559 | 2_2:-10155674 | Msa0237080:CDS |
| ATATTACAGGCGGTGGAAGC+AGG | 0.479398 | 2_2:-10156795 | Msa0237080:CDS |
| TCGTATTTGATCTGAACAAT+TGG | 0.480060 | 2_2:+10153125 | None:intergenic |
| CCTTGTGCAGCACAAGGAAA+AGG | 0.486212 | 2_2:-10156011 | Msa0237080:CDS |
| GTGCAATGAGGTGTTCTTGA+TGG | 0.487352 | 2_2:-10153297 | Msa0237080:exon |
| CTGTTATGGAAGATGTTGGT+AGG | 0.491069 | 2_2:+10155619 | None:intergenic |
| ATTACTATTAGGACATATAT+GGG | 0.496650 | 2_2:-10153222 | Msa0237080:three_prime_UTR |
| GACAATGTTAGATAGGTTGT+TGG | 0.501250 | 2_2:+10154121 | None:intergenic |
| AACAGGGTCGATAAAACGTT+GGG | 0.503162 | 2_2:+10155732 | None:intergenic |
| AGTCGGTTGTCTTCTGGAAG+CGG | 0.503270 | 2_2:+10155822 | None:intergenic |
| TGAATTACTGAGAGAGAAGC+TGG | 0.504426 | 2_2:-10154171 | Msa0237080:CDS |
| AACACTTACGTGCAGTGAAG+TGG | 0.505581 | 2_2:+10157287 | None:intergenic |
| AACAATGGCTGACACGCTAC+AGG | 0.516177 | 2_2:-10154198 | Msa0237080:CDS |
| AGATGAAAGTTCTTTCCCTC+AGG | 0.517228 | 2_2:-10155539 | Msa0237080:intron |
| TTCCATCCATCACCAAGAGC+TGG | 0.517381 | 2_2:-10156850 | Msa0237080:CDS |
| GTATTCACTCGACTTTGAAA+CGG | 0.519278 | 2_2:-10156987 | Msa0237080:intron |
| TGAGGGTGGCGATGAAGACT+TGG | 0.522080 | 2_2:-10153189 | Msa0237080:three_prime_UTR |
| ATGTAGATGATAGGATTGAC+AGG | 0.527338 | 2_2:-10155570 | Msa0237080:CDS |
| ACACCACAGCAACCAGCTCT+TGG | 0.531616 | 2_2:+10156838 | None:intergenic |
| ACATTTCAGATTCATTGAAA+CGG | 0.538518 | 2_2:-10153068 | Msa0237080:three_prime_UTR |
| GGAATTTCTTGTTGCATTTG+GGG | 0.539505 | 2_2:-10155990 | Msa0237080:CDS |
| CAGCAACCAGCTCTTGGTGA+TGG | 0.549757 | 2_2:+10156844 | None:intergenic |
| AACCAGCTCTTGGTGATGGA+TGG | 0.554218 | 2_2:+10156848 | None:intergenic |
| CACGTGGCATCTCTTTATGA+TGG | 0.554865 | 2_2:-10157064 | Msa0237080:CDS |
| AAGTGGTATATTACAGGCGG+TGG | 0.557210 | 2_2:-10156802 | Msa0237080:CDS |
| TTTCTTATATCCAGATGGCA+TGG | 0.566220 | 2_2:-10156894 | Msa0237080:intron |
| CAATTAAACGTGGTTCTGAA+AGG | 0.566360 | 2_2:-10155687 | Msa0237080:CDS |
| AGAGTCATTTCTAAGTTGAG+TGG | 0.578930 | 2_2:+10155756 | None:intergenic |
| CCGACTAGTACCAAAGGTCC+AGG | 0.580716 | 2_2:-10155805 | Msa0237080:CDS |
| CCTGGACCTTTGGTACTAGT+CGG | 0.585499 | 2_2:+10155805 | None:intergenic |
| CTCGTGGTAGAAAGTGATCA+CGG | 0.585915 | 2_2:-10154419 | Msa0237080:CDS |
| CCTGGTCCTTGTGCAGCACA+AGG | 0.587673 | 2_2:-10156017 | Msa0237080:CDS |
| TGAAAAGGTTTCCTTGGAGT+AGG | 0.590528 | 2_2:+10153321 | None:intergenic |
| TTGTTGGTAGTGATAGAAGA+AGG | 0.594047 | 2_2:+10156428 | None:intergenic |
| TCACCAAGAGCTGGTTGCTG+TGG | 0.597396 | 2_2:-10156841 | Msa0237080:CDS |
| TTGATCTCAAGTCCTTGACA+TGG | 0.599083 | 2_2:-10157313 | Msa0237080:CDS |
| CAACAGGGTCGATAAAACGT+TGG | 0.602316 | 2_2:+10155731 | None:intergenic |
| GTGAAGTGGAAGCCATGTCA+AGG | 0.607359 | 2_2:+10157301 | None:intergenic |
| TGCAGAGTTAGCTCAAGAAG+AGG | 0.607697 | 2_2:-10154144 | Msa0237080:CDS |
| TTGACTGTTATGGAAGATGT+TGG | 0.616809 | 2_2:+10155615 | None:intergenic |
| TCGTGTGCATCTGATATCCA+GGG | 0.622732 | 2_2:+10154519 | None:intergenic |
| AGAACAAATCAAAATGACCC+TGG | 0.624967 | 2_2:-10154536 | Msa0237080:CDS |
| AAAATCGAGCACCTACTCCA+AGG | 0.629709 | 2_2:-10153332 | Msa0237080:CDS |
| GAATTTCTTGTTGCATTTGG+GGG | 0.629851 | 2_2:-10155989 | Msa0237080:CDS |
| TGTTATGGAAGATGTTGGTA+GGG | 0.635463 | 2_2:+10155620 | None:intergenic |
| CTAGCATCTGCAATTAAACG+TGG | 0.637684 | 2_2:-10155697 | Msa0237080:CDS |
| TCGTGGTAGAAAGTGATCAC+GGG | 0.638127 | 2_2:-10154418 | Msa0237080:CDS |
| ACAAGAAATGGATAAAACAA+TGG | 0.639188 | 2_2:-10154213 | Msa0237080:CDS |
| CGTGATCACTTTCTACCACG+AGG | 0.645412 | 2_2:+10154420 | None:intergenic |
| AGGAGCCAAAATCAATATGG+AGG | 0.652394 | 2_2:-10154495 | Msa0237080:CDS |
| ACGTGGTTGAATCTTGGAGA+AGG | 0.655883 | 2_2:+10157082 | None:intergenic |
| TTCTTCTATCACTACCAACA+AGG | 0.656018 | 2_2:-10156426 | Msa0237080:intron |
| GGATATCAGATGCACACGAG+AGG | 0.670333 | 2_2:-10154515 | Msa0237080:CDS |
| AGACAACCGACTAGTACCAA+AGG | 0.673944 | 2_2:-10155811 | Msa0237080:CDS |
| CAAGCCTTACATTGTCGGAG+TGG | 0.682789 | 2_2:+10154099 | None:intergenic |
| TGGTCAAGAATAAAGGTGCG+TGG | 0.685381 | 2_2:-10156874 | Msa0237080:CDS |
| TTACTGAGAGAGAAGCTGGT+CGG | 0.685529 | 2_2:-10154167 | Msa0237080:CDS |
| TGTAAGGCTTGAACATGATG+TGG | 0.686712 | 2_2:-10154087 | Msa0237080:CDS |
| TTGGTAGTGATAGAAGAAGG+AGG | 0.691034 | 2_2:+10156431 | None:intergenic |
| ACTAAGTGGTATATTACAGG+CGG | 0.714772 | 2_2:-10156805 | Msa0237080:CDS |
| CATCATAAAGAGATGCCACG+TGG | 0.722412 | 2_2:+10157065 | None:intergenic |
| TTCTCCAAGATTCAACCACG+TGG | 0.739104 | 2_2:-10157080 | Msa0237080:CDS |
| GTAGTGATAGAAGAAGGAGG+CGG | 0.739186 | 2_2:+10156434 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAAATAATTTTAGAAGT+TGG | - | chr2_2:10155113-10155132 | Msa0237080:intron | 10.0% |
| !! | TTTCAATTTAATTACAAAAA+TGG | - | chr2_2:10156554-10156573 | Msa0237080:intron | 10.0% |
| !! | ATATAAAACATAAAATTACA+TGG | + | chr2_2:10156777-10156796 | None:intergenic | 10.0% |
| !!! | ATGATTTTTTTGTTTAGAAA+AGG | - | chr2_2:10153111-10153130 | Msa0237080:three_prime_UTR | 15.0% |
| !!! | GGTAAAATTCTTTTTATATT+TGG | - | chr2_2:10153320-10153339 | Msa0237080:CDS | 15.0% |
| !!! | AAAATTCTTTTTATATTTGG+AGG | - | chr2_2:10153323-10153342 | Msa0237080:CDS | 15.0% |
| !!! | ATGATATTCTAAAAAATGAA+TGG | - | chr2_2:10153891-10153910 | Msa0237080:intron | 15.0% |
| !!! | TTTTAACCTTTTATTTTTCT+TGG | - | chr2_2:10154478-10154497 | Msa0237080:CDS | 15.0% |
| !! | AATAGAAAAAAATTGATTGT+AGG | + | chr2_2:10155048-10155067 | None:intergenic | 15.0% |
| !! | AACATTCTATAATGAAAAAT+TGG | - | chr2_2:10155454-10155473 | Msa0237080:intron | 15.0% |
| !! | TTCAAATTTGTATATATTGT+TGG | - | chr2_2:10155586-10155605 | Msa0237080:CDS | 15.0% |
| !!! | TTTTAAAAACAAACAAGAAA+TGG | - | chr2_2:10156138-10156157 | Msa0237080:intron | 15.0% |
| !!! | ATATATGACATTTCATTTTA+TGG | - | chr2_2:10156336-10156355 | Msa0237080:intron | 15.0% |
| !!! | TTTCTATATTTTTGTGTATT+TGG | - | chr2_2:10156498-10156517 | Msa0237080:intron | 15.0% |
| !! | GAAAATATAACAAAAAATAC+AGG | - | chr2_2:10156663-10156682 | Msa0237080:intron | 15.0% |
| !!! | TATAAAAAATGCAAATTTTG+TGG | + | chr2_2:10156893-10156912 | None:intergenic | 15.0% |
| !! | TGAAAGATTATATTACTTCA+GGG | - | chr2_2:10153250-10153269 | Msa0237080:three_prime_UTR | 20.0% |
| !! | TTCATCACAATATAACTAAA+CGG | + | chr2_2:10153414-10153433 | None:intergenic | 20.0% |
| !! | TGAATATTTAATTCGCATAT+TGG | + | chr2_2:10153449-10153468 | None:intergenic | 20.0% |
| !!! | AATAAGCATAAAAGTTTTCA+AGG | - | chr2_2:10153699-10153718 | Msa0237080:intron | 20.0% |
| !!! | ATTTTAAGTTCAAATGTCAT+TGG | - | chr2_2:10153754-10153773 | Msa0237080:intron | 20.0% |
| !! | AATTTCATATTTGAAAACTG+AGG | + | chr2_2:10154225-10154244 | None:intergenic | 20.0% |
| !! | AAACCTTGATATATATGAAA+TGG | + | chr2_2:10154952-10154971 | None:intergenic | 20.0% |
| !!! | CAATTTTAATGTCTATACTA+CGG | + | chr2_2:10155403-10155422 | None:intergenic | 20.0% |
| !! | GAAAATAACATATGACATAT+AGG | + | chr2_2:10155434-10155453 | None:intergenic | 20.0% |
| !! | GAATGATTGGAATAAAATAA+GGG | + | chr2_2:10155697-10155716 | None:intergenic | 20.0% |
| !! | AAAGTATGTTTATTGAATCA+TGG | + | chr2_2:10155719-10155738 | None:intergenic | 20.0% |
| !!! | ATTCAATATTAGCATTTTAC+AGG | + | chr2_2:10156375-10156394 | None:intergenic | 20.0% |
| !!! | TAACAAAAAATACAGGTTTT+TGG | - | chr2_2:10156670-10156689 | Msa0237080:intron | 20.0% |
| !! | TTCGTAATTAAATATGTAGA+AGG | - | chr2_2:10156698-10156717 | Msa0237080:intron | 20.0% |
| !!! | TTTTTTTTTCTTCAGGATTT+TGG | - | chr2_2:10156747-10156766 | Msa0237080:intron | 20.0% |
| !! | TATGATCAATTATGTTGTTA+AGG | - | chr2_2:10156794-10156813 | Msa0237080:CDS | 20.0% |
| !! | ATGATCAATTATGTTGTTAA+GGG | - | chr2_2:10156795-10156814 | Msa0237080:CDS | 20.0% |
| !! | TATTACTATTAGGACATATA+TGG | - | chr2_2:10157140-10157159 | Msa0237080:intron | 20.0% |
| !! | ATTACTATTAGGACATATAT+GGG | - | chr2_2:10157141-10157160 | Msa0237080:intron | 20.0% |
| ! | AAGGTTAGAAATCAAAAGTT+TGG | - | chr2_2:10153130-10153149 | Msa0237080:three_prime_UTR | 25.0% |
| !! | ATCAAAAGTTTGGATTTTGA+CGG | - | chr2_2:10153140-10153159 | Msa0237080:three_prime_UTR | 25.0% |
| ! | AAGTAATATAATCTTTCAGG+AGG | + | chr2_2:10153248-10153267 | None:intergenic | 25.0% |
| ! | CTGAAGTAATATAATCTTTC+AGG | + | chr2_2:10153251-10153270 | None:intergenic | 25.0% |
| ! | CTGAAAGATTATATTACTTC+AGG | - | chr2_2:10153249-10153268 | Msa0237080:three_prime_UTR | 25.0% |
| ! | GAAAGATTATATTACTTCAG+GGG | - | chr2_2:10153251-10153270 | Msa0237080:three_prime_UTR | 25.0% |
| ! | ATTCATTTCTTATATCCAGA+TGG | - | chr2_2:10153464-10153483 | Msa0237080:intron | 25.0% |
| !!! | TTACTTTTATTAACTTCCTC+AGG | + | chr2_2:10153734-10153753 | None:intergenic | 25.0% |
| ! | TTCAAATGTCATTGGAAATT+TGG | - | chr2_2:10153762-10153781 | Msa0237080:intron | 25.0% |
| ! | CAGGAAAGTTAAAATTTGTA+AGG | + | chr2_2:10153838-10153857 | None:intergenic | 25.0% |
| ! | AAATAAAATGTTCACCTTGT+TGG | + | chr2_2:10153954-10153973 | None:intergenic | 25.0% |
| ! | TATAAGTGCAAAAGACTAAA+TGG | + | chr2_2:10154069-10154088 | None:intergenic | 25.0% |
| !! | TATAACTCAGATTTTGTTCA+AGG | - | chr2_2:10154085-10154104 | Msa0237080:CDS | 25.0% |
| ! | AAGAATTCAATGTAGATGAT+AGG | - | chr2_2:10154784-10154803 | Msa0237080:intron | 25.0% |
| !!! | AATGTGGTTTTAATGTATGA+TGG | - | chr2_2:10154883-10154902 | Msa0237080:intron | 25.0% |
| ! | CAACCATTTCATATATATCA+AGG | - | chr2_2:10154946-10154965 | Msa0237080:intron | 25.0% |
| !!! | CTATTACTCATTTTTATCCT+AGG | - | chr2_2:10155063-10155082 | Msa0237080:intron | 25.0% |
| !!! | TCATTTTTATCCTAGGATTT+GGG | - | chr2_2:10155070-10155089 | Msa0237080:intron | 25.0% |
| !!! | AATTTTAGAAGTTGGAAAGT+TGG | - | chr2_2:10155121-10155140 | Msa0237080:intron | 25.0% |
| !!! | TAAAAGTTGATGAATATTGC+AGG | - | chr2_2:10155144-10155163 | Msa0237080:intron | 25.0% |
| ! | GAAATCTTTGCAAATTGAAT+TGG | + | chr2_2:10155278-10155297 | None:intergenic | 25.0% |
| ! | ATTCAATTTGCAAAGATTTC+TGG | - | chr2_2:10155278-10155297 | Msa0237080:intron | 25.0% |
| !!! | AAAGATTTCTGGTAGAAAAT+GGG | - | chr2_2:10155289-10155308 | Msa0237080:intron | 25.0% |
| ! | GTAACAGTTAAAGAAATTGA+GGG | - | chr2_2:10155337-10155356 | Msa0237080:intron | 25.0% |
| ! | GTATATATTGTTGGAAAATC+AGG | - | chr2_2:10155595-10155614 | Msa0237080:CDS | 25.0% |
| ! | TTCAGATCTTCCTTTATTAT+AGG | - | chr2_2:10155663-10155682 | Msa0237080:CDS | 25.0% |
| ! | GGAATAAGTACCTATAATAA+AGG | + | chr2_2:10155676-10155695 | None:intergenic | 25.0% |
| ! | GGAATGATTGGAATAAAATA+AGG | + | chr2_2:10155698-10155717 | None:intergenic | 25.0% |
| ! | TTATTGAATCATGGAATGAT+TGG | + | chr2_2:10155710-10155729 | None:intergenic | 25.0% |
| !!! | TTTCGAAAAAATCTAGCTTT+TGG | - | chr2_2:10155917-10155936 | Msa0237080:intron | 25.0% |
| !!! | AATGCCAAATTTTGTTATCA+GGG | + | chr2_2:10156053-10156072 | None:intergenic | 25.0% |
| ! | ACAAGAAATGGATAAAACAA+TGG | - | chr2_2:10156150-10156169 | Msa0237080:intron | 25.0% |
| !!! | TGTTTTAGATGATACACAAA+AGG | - | chr2_2:10156312-10156331 | Msa0237080:intron | 25.0% |
| !!! | CAAAACTTTTAAAAACAGCA+AGG | + | chr2_2:10156596-10156615 | None:intergenic | 25.0% |
| ! | AAAAAAAAAACTGGCAAGTT+TGG | + | chr2_2:10156736-10156755 | None:intergenic | 25.0% |
| ! | ATCCTGAAGAAAAAAAAAAC+TGG | + | chr2_2:10156745-10156764 | None:intergenic | 25.0% |
| ! | ACAAAGCTCATATTACTATT+AGG | - | chr2_2:10157130-10157149 | Msa0237080:intron | 25.0% |
| !! | TCTAAAATCTCATTTCTGTA+TGG | + | chr2_2:10157275-10157294 | None:intergenic | 25.0% |
| ! | ACATTTCAGATTCATTGAAA+CGG | - | chr2_2:10157295-10157314 | Msa0237080:intron | 25.0% |
| !! | TCAAAAGTTTGGATTTTGAC+GGG | - | chr2_2:10153141-10153160 | Msa0237080:three_prime_UTR | 30.0% |
| TATATCATGTTGTTGTGAGT+AGG | + | chr2_2:10153171-10153190 | None:intergenic | 30.0% | |
| CAGATTAAATTTCAGATGCA+TGG | + | chr2_2:10153203-10153222 | None:intergenic | 30.0% | |
| TTCGCATATTGGAAATCAAT+AGG | + | chr2_2:10153438-10153457 | None:intergenic | 30.0% | |
| TGCAAGGGAAATAACAAAAA+CGG | - | chr2_2:10153665-10153684 | Msa0237080:intron | 30.0% | |
| ! | TCATTGGAAATTTGGAATGA+TGG | - | chr2_2:10153770-10153789 | Msa0237080:intron | 30.0% |
| ! | AACTTTCCTGTATACTTTTC+AGG | - | chr2_2:10153848-10153867 | Msa0237080:intron | 30.0% |
| TAATGATACGTAAACATGAC+AGG | + | chr2_2:10153979-10153998 | None:intergenic | 30.0% | |
| AGTACTAAAATCCCACAAAT+TGG | - | chr2_2:10154119-10154138 | Msa0237080:CDS | 30.0% | |
| TAATGAACTTCCATTTAACC+AGG | + | chr2_2:10154148-10154167 | None:intergenic | 30.0% | |
| ! | GAAGTTCATTAGACATGTTT+TGG | - | chr2_2:10154157-10154176 | Msa0237080:CDS | 30.0% |
| AAGGAATTTCTTGTTGCATT+TGG | - | chr2_2:10154371-10154390 | Msa0237080:CDS | 30.0% | |
| AGGAATTTCTTGTTGCATTT+GGG | - | chr2_2:10154372-10154391 | Msa0237080:CDS | 30.0% | |
| TCACAGCCAAGAAAAATAAA+AGG | + | chr2_2:10154487-10154506 | None:intergenic | 30.0% | |
| !!! | TGTTTTTCAAGTATAGATCC+TGG | + | chr2_2:10154579-10154598 | None:intergenic | 30.0% |
| ! | CTAGATTTTGTATAGCAACA+GGG | + | chr2_2:10154650-10154669 | None:intergenic | 30.0% |
| ! | TTCTGAAAGGAAATCTTTGT+CGG | - | chr2_2:10154689-10154708 | Msa0237080:intron | 30.0% |
| CATGATCAAATTGACTGTTA+TGG | + | chr2_2:10154761-10154780 | None:intergenic | 30.0% | |
| ATTAAAACCACATTAGAGCA+TGG | + | chr2_2:10154877-10154896 | None:intergenic | 30.0% | |
| AGGAAATGAAGGAAACTAAT+AGG | + | chr2_2:10155007-10155026 | None:intergenic | 30.0% | |
| !! | CTCATTTTTATCCTAGGATT+TGG | - | chr2_2:10155069-10155088 | Msa0237080:intron | 30.0% |
| ATCATTAAAACCCAAATCCT+AGG | + | chr2_2:10155083-10155102 | None:intergenic | 30.0% | |
| AGAGATTAGGATTTGAAGAA+GGG | - | chr2_2:10155175-10155194 | Msa0237080:intron | 30.0% | |
| ! | GGAGCAGAATTTAATGTTTT+TGG | - | chr2_2:10155216-10155235 | Msa0237080:intron | 30.0% |
| !!! | TAATGTTTTTGGTGAGCTTT+CGG | - | chr2_2:10155227-10155246 | Msa0237080:intron | 30.0% |
| !! | CAAAGATTTCTGGTAGAAAA+TGG | - | chr2_2:10155288-10155307 | Msa0237080:intron | 30.0% |
| CGTAACAGTTAAAGAAATTG+AGG | - | chr2_2:10155336-10155355 | Msa0237080:intron | 30.0% | |
| TGATTCTGCAATAACTTCTT+GGG | + | chr2_2:10155373-10155392 | None:intergenic | 30.0% | |
| TTGATTCTGCAATAACTTCT+TGG | + | chr2_2:10155374-10155393 | None:intergenic | 30.0% | |
| TCACTTCTCATCAAAGTAAT+TGG | + | chr2_2:10155482-10155501 | None:intergenic | 30.0% | |
| ! | CCTGATGAATTTATGTTTTC+AGG | + | chr2_2:10155977-10155996 | None:intergenic | 30.0% |
| CCTGAAAACATAAATTCATC+AGG | - | chr2_2:10155974-10155993 | Msa0237080:CDS | 30.0% | |
| !! | GAATGCCAAATTTTGTTATC+AGG | + | chr2_2:10156054-10156073 | None:intergenic | 30.0% |
| GATAACAAAATTTGGCATTC+TGG | - | chr2_2:10156054-10156073 | Msa0237080:intron | 30.0% | |
| !!! | TGCCAGTTTTTTTTTTCTTC+AGG | - | chr2_2:10156740-10156759 | Msa0237080:intron | 30.0% |
| ! | TGATATTTTGTCACCATACT+TGG | - | chr2_2:10156930-10156949 | Msa0237080:intron | 30.0% |
| ! | GATATTTTGTCACCATACTT+GGG | - | chr2_2:10156931-10156950 | Msa0237080:intron | 30.0% |
| ATGTTTAAGAAACCCAAGTA+TGG | + | chr2_2:10156946-10156965 | None:intergenic | 30.0% | |
| TCGTATTTGATCTGAACAAT+TGG | + | chr2_2:10157241-10157260 | None:intergenic | 30.0% | |
| ! | GTATTCACTCGACTTTGAAA+CGG | - | chr2_2:10153376-10153395 | Msa0237080:intron | 35.0% |
| TTTCTTATATCCAGATGGCA+TGG | - | chr2_2:10153469-10153488 | Msa0237080:intron | 35.0% | |
| ACTAAGTGGTATATTACAGG+CGG | - | chr2_2:10153558-10153577 | Msa0237080:intron | 35.0% | |
| GGTAAAGAAATGAGAGACAT+GGG | + | chr2_2:10153627-10153646 | None:intergenic | 35.0% | |
| AGGTAAAGAAATGAGAGACA+TGG | + | chr2_2:10153628-10153647 | None:intergenic | 35.0% | |
| !! | TTGTTGGTAGTGATAGAAGA+AGG | + | chr2_2:10153938-10153957 | None:intergenic | 35.0% |
| TTCTTCTATCACTACCAACA+AGG | - | chr2_2:10153937-10153956 | Msa0237080:intron | 35.0% | |
| ! | TCAGATTTTGTTCAAGGTAG+TGG | - | chr2_2:10154091-10154110 | Msa0237080:CDS | 35.0% |
| ! | CAGATTTTGTTCAAGGTAGT+GGG | - | chr2_2:10154092-10154111 | Msa0237080:CDS | 35.0% |
| GGAAAATTAAATCCTAGCGA+AGG | + | chr2_2:10154204-10154223 | None:intergenic | 35.0% | |
| ATGATTTCCGTTGTATTAGC+AGG | - | chr2_2:10154316-10154335 | Msa0237080:CDS | 35.0% | |
| TGATTTCCGTTGTATTAGCA+GGG | - | chr2_2:10154317-10154336 | Msa0237080:CDS | 35.0% | |
| CTAAAACCCTGCTAATACAA+CGG | + | chr2_2:10154326-10154345 | None:intergenic | 35.0% | |
| GGAATTTCTTGTTGCATTTG+GGG | - | chr2_2:10154373-10154392 | Msa0237080:CDS | 35.0% | |
| GAATTTCTTGTTGCATTTGG+GGG | - | chr2_2:10154374-10154393 | Msa0237080:CDS | 35.0% | |
| !!! | CTGATTTGATGCCTCTTTTT+TGG | + | chr2_2:10154402-10154421 | None:intergenic | 35.0% |
| !! | CAAAAAAGAGGCATCAAATC+AGG | - | chr2_2:10154400-10154419 | Msa0237080:CDS | 35.0% |
| !! | TTATTTTTCTTGGCTGTGAC+AGG | - | chr2_2:10154488-10154507 | Msa0237080:CDS | 35.0% |
| ! | AGAGTCATTTCTAAGTTGAG+TGG | + | chr2_2:10154610-10154629 | None:intergenic | 35.0% |
| ! | GCTAGATTTTGTATAGCAAC+AGG | + | chr2_2:10154651-10154670 | None:intergenic | 35.0% |
| !! | CAATTAAACGTGGTTCTGAA+AGG | - | chr2_2:10154676-10154695 | Msa0237080:intron | 35.0% |
| TGTTATGGAAGATGTTGGTA+GGG | + | chr2_2:10154746-10154765 | None:intergenic | 35.0% | |
| TTGACTGTTATGGAAGATGT+TGG | + | chr2_2:10154751-10154770 | None:intergenic | 35.0% | |
| ATGTAGATGATAGGATTGAC+AGG | - | chr2_2:10154793-10154812 | Msa0237080:intron | 35.0% | |
| ! | AGAACTTCTGTTTTACCTGA+GGG | + | chr2_2:10154842-10154861 | None:intergenic | 35.0% |
| ! | AAGAACTTCTGTTTTACCTG+AGG | + | chr2_2:10154843-10154862 | None:intergenic | 35.0% |
| ATCATAACCATGCTCTAATG+TGG | - | chr2_2:10154867-10154886 | Msa0237080:intron | 35.0% | |
| ! | TCAAGGTTTGATTGTGCTTT+TGG | - | chr2_2:10154963-10154982 | Msa0237080:intron | 35.0% |
| TAATAGGCAGAAAAATCTCG+AGG | + | chr2_2:10154991-10155010 | None:intergenic | 35.0% | |
| GAGAGATTAGGATTTGAAGA+AGG | - | chr2_2:10155174-10155193 | Msa0237080:intron | 35.0% | |
| !!! | CTTTTTTTGTCGTCAAAGGA+GGG | + | chr2_2:10155526-10155545 | None:intergenic | 35.0% |
| !!! | ACTTTTTTTGTCGTCAAAGG+AGG | + | chr2_2:10155527-10155546 | None:intergenic | 35.0% |
| !!! | GTCACTTTTTTTGTCGTCAA+AGG | + | chr2_2:10155530-10155549 | None:intergenic | 35.0% |
| TATCACAAGTATTAGCACCA+GGG | + | chr2_2:10155552-10155571 | None:intergenic | 35.0% | |
| TTATCACAAGTATTAGCACC+AGG | + | chr2_2:10155553-10155572 | None:intergenic | 35.0% | |
| AGAACAAATCAAAATGACCC+TGG | - | chr2_2:10155827-10155846 | Msa0237080:CDS | 35.0% | |
| !!! | CTGTTCCTCCATATTGATTT+TGG | + | chr2_2:10155876-10155895 | None:intergenic | 35.0% |
| CAAAATCAATATGGAGGAAC+AGG | - | chr2_2:10155874-10155893 | Msa0237080:intron | 35.0% | |
| TCCTCCCTGATAACAAAATT+TGG | - | chr2_2:10156046-10156065 | Msa0237080:intron | 35.0% | |
| GACAATGTTAGATAGGTTGT+TGG | + | chr2_2:10156245-10156264 | None:intergenic | 35.0% | |
| ATGTTCAAGCCTTACATTGT+CGG | + | chr2_2:10156272-10156291 | None:intergenic | 35.0% | |
| ATTGAATGTGCTAACTTAGC+AGG | - | chr2_2:10156388-10156407 | Msa0237080:intron | 35.0% | |
| ATAGAGTTGTGATCAATCCA+AGG | + | chr2_2:10156479-10156498 | None:intergenic | 35.0% | |
| CAATTATGTTGTTAAGGGTG+AGG | - | chr2_2:10156800-10156819 | Msa0237080:CDS | 35.0% | |
| ! | AAACCTTTTCATGTGCAATG+AGG | - | chr2_2:10157054-10157073 | Msa0237080:CDS | 35.0% |
| !! | GAGCTTTGTGTCATCATTTT+TGG | + | chr2_2:10157119-10157138 | None:intergenic | 35.0% |
| !! | TATATGGGAAGTGCATTTTG+AGG | - | chr2_2:10157156-10157175 | Msa0237080:intron | 35.0% |
| !! | ATATGGGAAGTGCATTTTGA+GGG | - | chr2_2:10157157-10157176 | Msa0237080:intron | 35.0% |
| CATTAACACTGCATCTTTAG+AGG | + | chr2_2:10157204-10157223 | None:intergenic | 35.0% | |
| ATGCAGTGTTAATGCATTAC+TGG | - | chr2_2:10157210-10157229 | Msa0237080:intron | 35.0% | |
| TTGATCTCAAGTCCTTGACA+TGG | - | chr2_2:10153050-10153069 | Msa0237080:three_prime_UTR | 40.0% | |
| TTATTCTTGACCATGCCATC+TGG | + | chr2_2:10153482-10153501 | None:intergenic | 40.0% | |
| GATGGCATGGTCAAGAATAA+AGG | - | chr2_2:10153482-10153501 | Msa0237080:intron | 40.0% | |
| ! | GTGTTTTATGTGGCACTAAG+TGG | - | chr2_2:10153544-10153563 | Msa0237080:intron | 40.0% |
| GGCACTAAGTGGTATATTAC+AGG | - | chr2_2:10153555-10153574 | Msa0237080:intron | 40.0% | |
| ! | GCAGTTAGCGTTGAAAGAAA+AGG | + | chr2_2:10153648-10153667 | None:intergenic | 40.0% |
| TTCTTTCAACGCTAACTGCA+AGG | - | chr2_2:10153649-10153668 | Msa0237080:intron | 40.0% | |
| TCTTTCAACGCTAACTGCAA+GGG | - | chr2_2:10153650-10153669 | Msa0237080:intron | 40.0% | |
| ! | TTCAAGGTTTTTCTCACCTG+AGG | - | chr2_2:10153715-10153734 | Msa0237080:intron | 40.0% |
| ! | CCATGTCCTGAAAAGTATAC+AGG | + | chr2_2:10153857-10153876 | None:intergenic | 40.0% |
| !! | CCTGTATACTTTTCAGGACA+TGG | - | chr2_2:10153854-10153873 | Msa0237080:intron | 40.0% |
| !! | TTGGTAGTGATAGAAGAAGG+AGG | + | chr2_2:10153935-10153954 | None:intergenic | 40.0% |
| ! | AAATTGGCCTCCTGGTTAAA+TGG | - | chr2_2:10154135-10154154 | Msa0237080:CDS | 40.0% |
| TGAACTTCCATTTAACCAGG+AGG | + | chr2_2:10154145-10154164 | None:intergenic | 40.0% | |
| TACTGATGAAAACCTTCGCT+AGG | - | chr2_2:10154189-10154208 | Msa0237080:CDS | 40.0% | |
| ATTTGGGGGATCCAAAAAAG+AGG | - | chr2_2:10154388-10154407 | Msa0237080:CDS | 40.0% | |
| AAGTATAGATCCTGGACCTT+TGG | + | chr2_2:10154571-10154590 | None:intergenic | 40.0% | |
| AACAGGGTCGATAAAACGTT+GGG | + | chr2_2:10154634-10154653 | None:intergenic | 40.0% | |
| CTAGCATCTGCAATTAAACG+TGG | - | chr2_2:10154666-10154685 | Msa0237080:intron | 40.0% | |
| TCTCTGTTCGTACAAGATTC+TGG | - | chr2_2:10154714-10154733 | Msa0237080:intron | 40.0% | |
| CTGTTATGGAAGATGTTGGT+AGG | + | chr2_2:10154747-10154766 | None:intergenic | 40.0% | |
| TGATAGGATTGACAGGCATT+TGG | - | chr2_2:10154800-10154819 | Msa0237080:intron | 40.0% | |
| AGATGAAAGTTCTTTCCCTC+AGG | - | chr2_2:10154824-10154843 | Msa0237080:intron | 40.0% | |
| GTGCTTAGCTTAGGAAATGA+AGG | + | chr2_2:10155018-10155037 | None:intergenic | 40.0% | |
| GGATTGTATGTGCTTAGCTT+AGG | + | chr2_2:10155027-10155046 | None:intergenic | 40.0% | |
| GGATTTGAAGAAGGGAAAAG+TGG | - | chr2_2:10155183-10155202 | Msa0237080:intron | 40.0% | |
| ! | GGGAAAAGTGGAGACTTTTT+AGG | - | chr2_2:10155195-10155214 | Msa0237080:intron | 40.0% |
| TGTCTTCCTGCATATACTTC+AGG | - | chr2_2:10155793-10155812 | Msa0237080:CDS | 40.0% | |
| GAGAGGAGCCAAAATCAATA+TGG | - | chr2_2:10155865-10155884 | Msa0237080:intron | 40.0% | |
| AGGAGCCAAAATCAATATGG+AGG | - | chr2_2:10155868-10155887 | Msa0237080:intron | 40.0% | |
| ! | CAATATGGAGGAACAGGTTT+TGG | - | chr2_2:10155880-10155899 | Msa0237080:intron | 40.0% |
| !! | GCCAAATTTTGTTATCAGGG+AGG | + | chr2_2:10156050-10156069 | None:intergenic | 40.0% |
| TGAATTACTGAGAGAGAAGC+TGG | - | chr2_2:10156192-10156211 | Msa0237080:intron | 40.0% | |
| TGTAAGGCTTGAACATGATG+TGG | - | chr2_2:10156276-10156295 | Msa0237080:intron | 40.0% | |
| ! | ACATGATGTGGCTTTTCTGA+AGG | - | chr2_2:10156288-10156307 | Msa0237080:intron | 40.0% |
| ! | GTTCAGAAGTACACAATGAG+TGG | + | chr2_2:10156837-10156856 | None:intergenic | 40.0% |
| !!! | GCAATCTGTTTTGACTGCAT+AGG | - | chr2_2:10156969-10156988 | Msa0237080:intron | 40.0% |
| CAAACAGAGACTGCAATCAA+TGG | - | chr2_2:10157008-10157027 | Msa0237080:CDS | 40.0% | |
| TGAAAAGGTTTCCTTGGAGT+AGG | + | chr2_2:10157045-10157064 | None:intergenic | 40.0% | |
| TGCACATGAAAAGGTTTCCT+TGG | + | chr2_2:10157051-10157070 | None:intergenic | 40.0% | |
| ACACCTCATTGCACATGAAA+AGG | + | chr2_2:10157060-10157079 | None:intergenic | 40.0% | |
| AACACTTACGTGCAGTGAAG+TGG | + | chr2_2:10153079-10153098 | None:intergenic | 45.0% | |
| TCTTTCAGGAGGTAGTACGA+GGG | + | chr2_2:10153237-10153256 | None:intergenic | 45.0% | |
| ATCTTTCAGGAGGTAGTACG+AGG | + | chr2_2:10153238-10153257 | None:intergenic | 45.0% | |
| ACGTGGTTGAATCTTGGAGA+AGG | + | chr2_2:10153284-10153303 | None:intergenic | 45.0% | |
| TTCTCCAAGATTCAACCACG+TGG | - | chr2_2:10153283-10153302 | Msa0237080:three_prime_UTR | 45.0% | |
| CATCATAAAGAGATGCCACG+TGG | + | chr2_2:10153301-10153320 | None:intergenic | 45.0% | |
| CACGTGGCATCTCTTTATGA+TGG | - | chr2_2:10153299-10153318 | Msa0237080:exon | 45.0% | |
| ! | TGGTCAAGAATAAAGGTGCG+TGG | - | chr2_2:10153489-10153508 | Msa0237080:intron | 45.0% |
| ! | GGTTGCTGTGGTGTTTTATG+TGG | - | chr2_2:10153534-10153553 | Msa0237080:intron | 45.0% |
| AAGTGGTATATTACAGGCGG+TGG | - | chr2_2:10153561-10153580 | Msa0237080:intron | 45.0% | |
| GTAGTGATAGAAGAAGGAGG+CGG | + | chr2_2:10153932-10153951 | None:intergenic | 45.0% | |
| TAACCAGGAGGCCAATTTGT+GGG | + | chr2_2:10154133-10154152 | None:intergenic | 45.0% | |
| TTAACCAGGAGGCCAATTTG+TGG | + | chr2_2:10154134-10154153 | None:intergenic | 45.0% | |
| !! | GTATTAGCAGGGTTTTAGCC+TGG | - | chr2_2:10154328-10154347 | Msa0237080:CDS | 45.0% |
| ! | TTTTTCTTGGCTGTGACAGG+TGG | - | chr2_2:10154491-10154510 | Msa0237080:CDS | 45.0% |
| AGACAACCGACTAGTACCAA+AGG | - | chr2_2:10154552-10154571 | Msa0237080:intron | 45.0% | |
| CAACAGGGTCGATAAAACGT+TGG | + | chr2_2:10154635-10154654 | None:intergenic | 45.0% | |
| GCAGGAGTTTGTGAGAGATT+AGG | - | chr2_2:10155162-10155181 | Msa0237080:intron | 45.0% | |
| ! | AGAAGTGACCCTGATGATGA+GGG | - | chr2_2:10155494-10155513 | Msa0237080:intron | 45.0% |
| GACGACAAAAAAAGTGACCC+TGG | - | chr2_2:10155532-10155551 | Msa0237080:intron | 45.0% | |
| TCGTGTGCATCTGATATCCA+GGG | + | chr2_2:10155847-10155866 | None:intergenic | 45.0% | |
| !! | AGGAACAGGTTTTGGCATCT+GGG | - | chr2_2:10155888-10155907 | Msa0237080:intron | 45.0% |
| !!! | TCTAGCTTTTGGAAACCTCG+TGG | - | chr2_2:10155928-10155947 | Msa0237080:intron | 45.0% |
| CTCGTGGTAGAAAGTGATCA+CGG | - | chr2_2:10155944-10155963 | Msa0237080:intron | 45.0% | |
| TCGTGGTAGAAAGTGATCAC+GGG | - | chr2_2:10155945-10155964 | Msa0237080:intron | 45.0% | |
| ! | TGGCATTCTGGAAGCACAAT+TGG | - | chr2_2:10156066-10156085 | Msa0237080:intron | 45.0% |
| TTACTGAGAGAGAAGCTGGT+CGG | - | chr2_2:10156196-10156215 | Msa0237080:intron | 45.0% | |
| TGCAGAGTTAGCTCAAGAAG+AGG | - | chr2_2:10156219-10156238 | Msa0237080:intron | 45.0% | |
| CGGAGTGGACAATGTTAGAT+AGG | + | chr2_2:10156252-10156271 | None:intergenic | 45.0% | |
| TTGTCCACTCCGACAATGTA+AGG | - | chr2_2:10156260-10156279 | Msa0237080:intron | 45.0% | |
| CAGGAATTGCACTCTACAAG+AGG | - | chr2_2:10156407-10156426 | Msa0237080:intron | 45.0% | |
| TCTACAAGAGGAGTTCTTGC+AGG | - | chr2_2:10156419-10156438 | Msa0237080:intron | 45.0% | |
| TCCAATTGCAGGTACATCCT+TGG | - | chr2_2:10156459-10156478 | Msa0237080:CDS | 45.0% | |
| TCCAAGGATGTACCTGCAAT+TGG | + | chr2_2:10156463-10156482 | None:intergenic | 45.0% | |
| TGTTAAGGGTGAGGAATCTG+AGG | - | chr2_2:10156809-10156828 | Msa0237080:CDS | 45.0% | |
| AAAATCGAGCACCTACTCCA+AGG | - | chr2_2:10157031-10157050 | Msa0237080:CDS | 45.0% | |
| ! | GTGCAATGAGGTGTTCTTGA+TGG | - | chr2_2:10157066-10157085 | Msa0237080:CDS | 45.0% |
| GTGAAGTGGAAGCCATGTCA+AGG | + | chr2_2:10153065-10153084 | None:intergenic | 50.0% | |
| GATGCCACGTGGTTGAATCT+TGG | + | chr2_2:10153290-10153309 | None:intergenic | 50.0% | |
| TTCCATCCATCACCAAGAGC+TGG | - | chr2_2:10153513-10153532 | Msa0237080:intron | 50.0% | |
| !! | AACCAGCTCTTGGTGATGGA+TGG | + | chr2_2:10153518-10153537 | None:intergenic | 50.0% |
| ATATTACAGGCGGTGGAAGC+AGG | - | chr2_2:10153568-10153587 | Msa0237080:intron | 50.0% | |
| ! | AATCCCACAAATTGGCCTCC+TGG | - | chr2_2:10154127-10154146 | Msa0237080:CDS | 50.0% |
| ! | CCTTTTCCTTGTGCTGCACA+AGG | + | chr2_2:10154355-10154374 | None:intergenic | 50.0% |
| CCTTGTGCAGCACAAGGAAA+AGG | - | chr2_2:10154352-10154371 | Msa0237080:CDS | 50.0% | |
| ! | AGTCGGTTGTCTTCTGGAAG+CGG | + | chr2_2:10154544-10154563 | None:intergenic | 50.0% |
| GGTACTAGTCGGTTGTCTTC+TGG | + | chr2_2:10154550-10154569 | None:intergenic | 50.0% | |
| CCTGGACCTTTGGTACTAGT+CGG | + | chr2_2:10154561-10154580 | None:intergenic | 50.0% | |
| ! | GAGAAGTGACCCTGATGATG+AGG | - | chr2_2:10155493-10155512 | Msa0237080:intron | 50.0% |
| ! | GAAGTGACCCTGATGATGAG+GGG | - | chr2_2:10155495-10155514 | Msa0237080:intron | 50.0% |
| TGGAAAATCAGGCGATGTCG+TGG | - | chr2_2:10155606-10155625 | Msa0237080:CDS | 50.0% | |
| CTGCTGCCTGAAGTATATGC+AGG | + | chr2_2:10155802-10155821 | None:intergenic | 50.0% | |
| CTCGTGTGCATCTGATATCC+AGG | + | chr2_2:10155848-10155867 | None:intergenic | 50.0% | |
| GGATATCAGATGCACACGAG+AGG | - | chr2_2:10155848-10155867 | Msa0237080:CDS | 50.0% | |
| !! | GAGGAACAGGTTTTGGCATC+TGG | - | chr2_2:10155887-10155906 | Msa0237080:intron | 50.0% |
| !! | GGAACAGGTTTTGGCATCTG+GGG | - | chr2_2:10155889-10155908 | Msa0237080:intron | 50.0% |
| CGTGATCACTTTCTACCACG+AGG | + | chr2_2:10155946-10155965 | None:intergenic | 50.0% | |
| AACAATGGCTGACACGCTAC+AGG | - | chr2_2:10156165-10156184 | Msa0237080:intron | 50.0% | |
| CAAGCCTTACATTGTCGGAG+TGG | + | chr2_2:10156267-10156286 | None:intergenic | 50.0% | |
| TTCTTGCAGGAGAAAGAGCC+AGG | - | chr2_2:10156432-10156451 | Msa0237080:CDS | 50.0% | |
| TCTTGCAGGAGAAAGAGCCA+GGG | - | chr2_2:10156433-10156452 | Msa0237080:CDS | 50.0% | |
| TACCTGCAATTGGAATGCCC+TGG | + | chr2_2:10156453-10156472 | None:intergenic | 50.0% | |
| !! | TGGGAAGTGCATTTTGAGGG+TGG | - | chr2_2:10157160-10157179 | Msa0237080:intron | 50.0% |
| CAGCAACCAGCTCTTGGTGA+TGG | + | chr2_2:10153522-10153541 | None:intergenic | 55.0% | |
| TCACCAAGAGCTGGTTGCTG+TGG | - | chr2_2:10153522-10153541 | Msa0237080:intron | 55.0% | |
| ACACCACAGCAACCAGCTCT+TGG | + | chr2_2:10153528-10153547 | None:intergenic | 55.0% | |
| CCGACTAGTACCAAAGGTCC+AGG | - | chr2_2:10154558-10154577 | Msa0237080:intron | 55.0% | |
| GGCTAAGCCCCTCATCATCA+GGG | + | chr2_2:10155505-10155524 | None:intergenic | 55.0% | |
| ! | AGCCAGGGCATTCCAATTGC+AGG | - | chr2_2:10156448-10156467 | Msa0237080:CDS | 55.0% |
| TGAGGGTGGCGATGAAGACT+TGG | - | chr2_2:10157174-10157193 | Msa0237080:intron | 55.0% | |
| CCTTGTGCTGCACAAGGACC+AGG | + | chr2_2:10154349-10154368 | None:intergenic | 60.0% | |
| CCTGGTCCTTGTGCAGCACA+AGG | - | chr2_2:10154346-10154365 | Msa0237080:CDS | 60.0% | |
| GGGCTAAGCCCCTCATCATC+AGG | + | chr2_2:10155506-10155525 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 10153046 | 10157339 | 10153046 | ID=Msa0237080;Name=Msa0237080 |
| chr2_2 | mRNA | 10153046 | 10157339 | 10153046 | ID=Msa0237080-mRNA-1;Parent=Msa0237080;Name=Msa0237080-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.71|0.87|1|1|1|8|265|465 |
| chr2_2 | exon | 10153046 | 10153394 | 10153046 | ID=Msa0237080-mRNA-1:exon:4363;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10154052 | 10154570 | 10154052 | ID=Msa0237080-mRNA-1:exon:4362;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10155540 | 10155875 | 10155540 | ID=Msa0237080-mRNA-1:exon:4361;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10155964 | 10156047 | 10155964 | ID=Msa0237080-mRNA-1:exon:4360;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10156427 | 10156515 | 10156427 | ID=Msa0237080-mRNA-1:exon:4359;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10156788 | 10156902 | 10156788 | ID=Msa0237080-mRNA-1:exon:4358;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10156988 | 10157114 | 10156988 | ID=Msa0237080-mRNA-1:exon:4357;Parent=Msa0237080-mRNA-1 |
| chr2_2 | exon | 10157296 | 10157339 | 10157296 | ID=Msa0237080-mRNA-1:exon:4356;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10157296 | 10157339 | 10157296 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10156988 | 10157114 | 10156988 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10156788 | 10156902 | 10156788 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10156427 | 10156515 | 10156427 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10155964 | 10156047 | 10155964 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10155540 | 10155875 | 10155540 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10154052 | 10154570 | 10154052 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | CDS | 10153311 | 10153394 | 10153311 | ID=Msa0237080-mRNA-1:cds;Parent=Msa0237080-mRNA-1 |
| chr2_2 | three_prime_UTR | 10153046 | 10153310 | 10153046 | ID=Msa0237080-mRNA-1:three_prime_utr;Parent=Msa0237080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
