Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274680 | XP_003593967.2 | 92.925 | 636 | 12 | 3 | 1 | 616 | 77 | 699 | 0.0 | 1199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274680 | sp|Q75LJ4|ACBP6_ORYSJ | 37.429 | 350 | 212 | 4 | 3 | 349 | 173 | 518 | 7.85e-72 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa0274680 | 0.814509 | 1.486181e-51 | -8.615850e-47 |
| Msa0043670 | Msa0274680 | -0.823175 | 1.595642e-53 | -8.615850e-47 |
| Msa0046100 | Msa0274680 | 0.810414 | 1.166479e-50 | -8.615850e-47 |
| Msa0077200 | Msa0274680 | 0.801596 | 8.354990e-49 | -8.615850e-47 |
| Msa0092670 | Msa0274680 | -0.818488 | 1.909214e-52 | -8.615850e-47 |
| Msa0092690 | Msa0274680 | -0.807686 | 4.477573e-50 | -8.615850e-47 |
| Msa0092740 | Msa0274680 | -0.808442 | 3.091462e-50 | -8.615850e-47 |
| Msa0110970 | Msa0274680 | 0.818156 | 2.270675e-52 | -8.615850e-47 |
| Msa0115160 | Msa0274680 | 0.804573 | 2.024345e-49 | -8.615850e-47 |
| Msa0134180 | Msa0274680 | 0.829479 | 5.030673e-55 | -8.615850e-47 |
| Msa0137610 | Msa0274680 | -0.807262 | 5.509224e-50 | -8.615850e-47 |
| Msa0144360 | Msa0274680 | 0.809425 | 1.904049e-50 | -8.615850e-47 |
| Msa0146260 | Msa0274680 | 0.829248 | 5.724297e-55 | -8.615850e-47 |
| Msa0152400 | Msa0274680 | 0.814573 | 1.438406e-51 | -8.615850e-47 |
| Msa0180930 | Msa0274680 | 0.820796 | 5.674711e-53 | -8.615850e-47 |
| Msa0182620 | Msa0274680 | -0.805510 | 1.289485e-49 | -8.615850e-47 |
| Msa0195010 | Msa0274680 | 0.886833 | 2.423536e-72 | -8.615850e-47 |
| Msa0197420 | Msa0274680 | 0.824758 | 6.784049e-54 | -8.615850e-47 |
| Msa0205840 | Msa0274680 | 0.820326 | 7.278383e-53 | -8.615850e-47 |
| Msa0225460 | Msa0274680 | 0.850481 | 1.651094e-60 | -8.615850e-47 |
| Msa0225680 | Msa0274680 | 0.852353 | 4.881185e-61 | -8.615850e-47 |
| Msa0237030 | Msa0274680 | 0.843912 | 1.046449e-58 | -8.615850e-47 |
| Msa0237080 | Msa0274680 | 0.851673 | 7.612905e-61 | -8.615850e-47 |
| Msa0239190 | Msa0274680 | 0.819166 | 1.339238e-52 | -8.615850e-47 |
| Msa0239570 | Msa0274680 | 0.801459 | 8.913176e-49 | -8.615850e-47 |
| Msa0248970 | Msa0274680 | 0.811569 | 6.555501e-51 | -8.615850e-47 |
| Msa0255090 | Msa0274680 | 0.806724 | 7.158333e-50 | -8.615850e-47 |
| Msa0259380 | Msa0274680 | 0.805976 | 1.029354e-49 | -8.615850e-47 |
| Msa0264870 | Msa0274680 | 0.810677 | 1.023186e-50 | -8.615850e-47 |
| Msa0267110 | Msa0274680 | 0.812532 | 4.042757e-51 | -8.615850e-47 |
| Msa0274680 | Msa0277180 | 0.826469 | 2.667390e-54 | -8.615850e-47 |
| Msa0274680 | Msa0292400 | 0.803637 | 3.169588e-49 | -8.615850e-47 |
| Msa0274680 | Msa0294160 | 0.804306 | 2.301491e-49 | -8.615850e-47 |
| Msa0274680 | Msa0298500 | 0.834370 | 3.116549e-56 | -8.615850e-47 |
| Msa0274680 | Msa0308830 | 0.803976 | 2.696091e-49 | -8.615850e-47 |
| Msa0274680 | Msa0316810 | 0.826214 | 3.066674e-54 | -8.615850e-47 |
| Msa0274680 | Msa0317280 | 0.824562 | 7.545168e-54 | -8.615850e-47 |
| Msa0274680 | Msa0334220 | 0.806049 | 9.935259e-50 | -8.615850e-47 |
| Msa0274680 | Msa0336410 | 0.940139 | 3.883920e-100 | -8.615850e-47 |
| Msa0274680 | Msa0369170 | 0.800550 | 1.367742e-48 | -8.615850e-47 |
| Msa0274680 | Msa0410500 | 0.845985 | 2.885322e-59 | -8.615850e-47 |
| Msa0274680 | Msa0416590 | 0.808041 | 3.763557e-50 | -8.615850e-47 |
| Msa0274680 | Msa0417880 | 0.821873 | 3.203626e-53 | -8.615850e-47 |
| Msa0274680 | Msa0422850 | 0.834987 | 2.180273e-56 | -8.615850e-47 |
| Msa0274680 | Msa0422930 | 0.833047 | 6.675253e-56 | -8.615850e-47 |
| Msa0274680 | Msa0428150 | 0.817248 | 3.639083e-52 | -8.615850e-47 |
| Msa0274680 | Msa0447370 | 0.826236 | 3.031242e-54 | -8.615850e-47 |
| Msa0274680 | Msa0462500 | 0.814802 | 1.279720e-51 | -8.615850e-47 |
| Msa0274680 | Msa0467430 | 0.812449 | 4.216753e-51 | -8.615850e-47 |
| Msa0274680 | Msa0475790 | 0.822328 | 2.511881e-53 | -8.615850e-47 |
| Msa0274680 | Msa0513160 | 0.816639 | 4.985320e-52 | -8.615850e-47 |
| Msa0274680 | Msa0527550 | 0.813787 | 2.145092e-51 | -8.615850e-47 |
| Msa0274680 | Msa0527860 | 0.851381 | 9.211775e-61 | -8.615850e-47 |
| Msa0274680 | Msa0544830 | 0.807913 | 4.007320e-50 | -8.615850e-47 |
| Msa0274680 | Msa0546680 | 0.808677 | 2.753839e-50 | -8.615850e-47 |
| Msa0274680 | Msa0569200 | 0.816191 | 6.279436e-52 | -8.615850e-47 |
| Msa0274680 | Msa0571480 | 0.806114 | 9.624608e-50 | -8.615850e-47 |
| Msa0274680 | Msa0574890 | 0.859587 | 3.730971e-63 | -8.615850e-47 |
| Msa0274680 | Msa0582450 | 0.850174 | 2.013965e-60 | -8.615850e-47 |
| Msa0274680 | Msa0586190 | 0.850668 | 1.462950e-60 | -8.615850e-47 |
| Msa0274680 | Msa0587940 | 0.821375 | 4.175046e-53 | -8.615850e-47 |
| Msa0274680 | Msa0606160 | 0.809046 | 2.295568e-50 | -8.615850e-47 |
| Msa0274680 | Msa0620990 | 0.813946 | 1.978853e-51 | -8.615850e-47 |
| Msa0274680 | Msa0625630 | 0.829345 | 5.422631e-55 | -8.615850e-47 |
| Msa0274680 | Msa0626450 | 0.834209 | 3.421003e-56 | -8.615850e-47 |
| Msa0274680 | Msa0626490 | 0.837448 | 5.165982e-57 | -8.615850e-47 |
| Msa0274680 | Msa0647130 | 0.816372 | 5.722304e-52 | -8.615850e-47 |
| Msa0274680 | Msa0660310 | 0.814536 | 1.465252e-51 | -8.615850e-47 |
| Msa0274680 | Msa0663300 | 0.835947 | 1.247475e-56 | -8.615850e-47 |
| Msa0274680 | Msa0664060 | 0.834253 | 3.335001e-56 | -8.615850e-47 |
| Msa0274680 | Msa0664600 | 0.833111 | 6.434058e-56 | -8.615850e-47 |
| Msa0274680 | Msa0683570 | 0.834289 | 3.265787e-56 | -8.615850e-47 |
| Msa0274680 | Msa0702340 | 0.823989 | 1.029326e-53 | -8.615850e-47 |
| Msa0274680 | Msa0702590 | 0.826185 | 3.116333e-54 | -8.615850e-47 |
| Msa0274680 | Msa0702660 | 0.821899 | 3.158775e-53 | -8.615850e-47 |
| Msa0274680 | Msa0718550 | 0.810791 | 9.671503e-51 | -8.615850e-47 |
| Msa0274680 | Msa0749460 | 0.800506 | 1.396084e-48 | -8.615850e-47 |
| Msa0274680 | Msa0754520 | 0.808566 | 2.908240e-50 | -8.615850e-47 |
| Msa0274680 | Msa0801210 | 0.807791 | 4.254322e-50 | -8.615850e-47 |
| Msa0274680 | Msa0833220 | 0.809924 | 1.487871e-50 | -8.615850e-47 |
| Msa0274680 | Msa0839560 | 0.821242 | 4.481507e-53 | -8.615850e-47 |
| Msa0274680 | Msa0861510 | 0.818184 | 2.238095e-52 | -8.615850e-47 |
| Msa0274680 | Msa0861530 | 0.809926 | 1.486478e-50 | -8.615850e-47 |
| Msa0274680 | Msa0861600 | 0.815530 | 8.819032e-52 | -8.615850e-47 |
| Msa0274680 | Msa0896540 | 0.800543 | 1.371637e-48 | -8.615850e-47 |
| Msa0274680 | Msa0896970 | 0.827278 | 1.709159e-54 | -8.615850e-47 |
| Msa0274680 | Msa0930780 | 0.866454 | 2.818254e-65 | -8.615850e-47 |
| Msa0274680 | Msa0936340 | 0.801858 | 7.382217e-49 | -8.615850e-47 |
| Msa0274680 | Msa0945110 | 0.810707 | 1.008031e-50 | -8.615850e-47 |
| Msa0274680 | Msa0948290 | 0.807668 | 4.517957e-50 | -8.615850e-47 |
| Msa0274680 | Msa0968670 | 0.958630 | 1.464130e-116 | -8.615850e-47 |
| Msa0274680 | Msa1034230 | 0.815052 | 1.126143e-51 | -8.615850e-47 |
| Msa0274680 | Msa1037920 | 0.820982 | 5.144150e-53 | -8.615850e-47 |
| Msa0274680 | Msa1047980 | 0.805494 | 1.299558e-49 | -8.615850e-47 |
| Msa0274680 | Msa1097640 | 0.821000 | 5.095213e-53 | -8.615850e-47 |
| Msa0274680 | Msa1111130 | 0.805846 | 1.095899e-49 | -8.615850e-47 |
| Msa0274680 | Msa1113340 | 0.821422 | 4.072605e-53 | -8.615850e-47 |
| Msa0274680 | Msa1124110 | 0.802437 | 5.613386e-49 | -8.615850e-47 |
| Msa0274680 | Msa1129980 | 0.813027 | 3.149997e-51 | -8.615850e-47 |
| Msa0274680 | Msa1139810 | 0.804487 | 2.109835e-49 | -8.615850e-47 |
| Msa0274680 | Msa1143650 | 0.809709 | 1.655051e-50 | -8.615850e-47 |
| Msa0274680 | Msa1151910 | 0.801570 | 8.459977e-49 | -8.615850e-47 |
| Msa0274680 | Msa1157870 | 0.820248 | 7.582371e-53 | -8.615850e-47 |
| Msa0274680 | Msa1173330 | 0.835899 | 1.282361e-56 | -8.615850e-47 |
| Msa0274680 | Msa1179940 | 0.824421 | 8.148328e-54 | -8.615850e-47 |
| Msa0274680 | Msa1179970 | 0.814208 | 1.732319e-51 | -8.615850e-47 |
| Msa0274680 | Msa1200370 | 0.819807 | 9.564602e-53 | -8.615850e-47 |
| Msa0274680 | Msa1202190 | 0.819198 | 1.317004e-52 | -8.615850e-47 |
| Msa0274680 | Msa1224840 | 0.823179 | 1.592406e-53 | -8.615850e-47 |
| Msa0274680 | Msa1231550 | 0.806983 | 6.309880e-50 | -8.615850e-47 |
| Msa0274680 | Msa1232710 | 0.855657 | 5.447800e-62 | -8.615850e-47 |
| Msa0274680 | Msa1236100 | 0.829426 | 5.183306e-55 | -8.615850e-47 |
| Msa0274680 | Msa1252190 | 0.843341 | 1.487501e-58 | -8.615850e-47 |
| Msa0274680 | Msa1269480 | 0.827002 | 1.989184e-54 | -8.615850e-47 |
| Msa0274680 | Msa1274060 | 0.832757 | 7.878842e-56 | -8.615850e-47 |
| Msa0274680 | Msa1274280 | 0.823655 | 1.232451e-53 | -8.615850e-47 |
| Msa0274680 | Msa1283990 | 0.803080 | 4.135192e-49 | -8.615850e-47 |
| Msa0274680 | Msa1292830 | 0.827975 | 1.162452e-54 | -8.615850e-47 |
| Msa0274680 | Msa1306740 | 0.812891 | 3.374450e-51 | -8.615850e-47 |
| Msa0274680 | Msa1307570 | 0.843578 | 1.285374e-58 | -8.615850e-47 |
| Msa0274680 | Msa1313300 | 0.857833 | 1.246560e-62 | -8.615850e-47 |
| Msa0274680 | Msa1336120 | 0.814731 | 1.326609e-51 | -8.615850e-47 |
| Msa0274680 | Msa1340510 | 0.806481 | 8.057007e-50 | -8.615850e-47 |
| Msa0274680 | Msa1369150 | 0.837964 | 3.810081e-57 | -8.615850e-47 |
| Msa0274680 | Msa1373330 | 0.819271 | 1.268051e-52 | -8.615850e-47 |
| Msa0274680 | Msa1374040 | 0.827419 | 1.580677e-54 | -8.615850e-47 |
| Msa0274680 | Msa1388820 | 0.810031 | 1.410700e-50 | -8.615850e-47 |
| Msa0274680 | Msa1414320 | 0.816199 | 6.254399e-52 | -8.615850e-47 |
| Msa0274680 | Msa1422420 | 0.823087 | 1.673041e-53 | -8.615850e-47 |
| Msa0274680 | Msa1437460 | 0.817554 | 3.105133e-52 | -8.615850e-47 |
| Msa0274680 | Msa1440260 | -0.816553 | 5.212585e-52 | -8.615850e-47 |
| Msa0274680 | Msa1440960 | 0.825744 | 3.966121e-54 | -8.615850e-47 |
| Msa0274680 | Msa1445190 | 0.815358 | 9.633304e-52 | -8.615850e-47 |
| Msa0274680 | Msa1459180 | 0.827029 | 1.959920e-54 | -8.615850e-47 |
| Msa0274680 | Msa1459380 | 0.828489 | 8.740768e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274680 | MtrunA17_Chr2g0286241 | 92.925 | 636 | 12 | 3 | 1 | 616 | 77 | 699 | 0.0 | 1199 |
| Msa0274680 | MtrunA17_Chr4g0066851 | 72.231 | 641 | 147 | 8 | 1 | 616 | 85 | 719 | 0.0 | 916 |
| Msa0274680 | MtrunA17_Chr7g0272641 | 36.393 | 305 | 191 | 1 | 5 | 309 | 179 | 480 | 9.30e-65 | 224 |
| Msa0274680 | MtrunA17_Chr1g0197401 | 35.806 | 310 | 196 | 1 | 3 | 309 | 18 | 327 | 2.64e-64 | 220 |
| Msa0274680 | MtrunA17_Chr1g0192821 | 32.319 | 263 | 161 | 8 | 5 | 262 | 20 | 270 | 4.80e-28 | 119 |
| Msa0274680 | MtrunA17_Chr1g0192821 | 27.586 | 261 | 178 | 6 | 3 | 261 | 68 | 319 | 1.39e-24 | 108 |
| Msa0274680 | MtrunA17_Chr1g0192821 | 26.570 | 207 | 98 | 4 | 109 | 262 | 15 | 220 | 3.94e-14 | 75.5 |
| Msa0274680 | MtrunA17_Chr1g0192821 | 32.692 | 156 | 94 | 4 | 156 | 308 | 11 | 158 | 6.24e-14 | 75.1 |
| Msa0274680 | MtrunA17_Chr4g0061581 | 32.051 | 234 | 141 | 5 | 4 | 228 | 69 | 293 | 3.93e-24 | 107 |
| Msa0274680 | MtrunA17_Chr4g0061581 | 32.143 | 168 | 103 | 4 | 113 | 270 | 16 | 182 | 7.98e-17 | 84.3 |
| Msa0274680 | MtrunA17_Chr4g0061581 | 28.279 | 244 | 158 | 7 | 6 | 241 | 18 | 252 | 1.15e-16 | 83.6 |
| Msa0274680 | MtrunA17_Chr4g0074871 | 31.193 | 218 | 130 | 7 | 16 | 224 | 281 | 487 | 6.64e-21 | 97.8 |
| Msa0274680 | MtrunA17_Chr4g0074871 | 27.660 | 235 | 158 | 6 | 10 | 243 | 333 | 556 | 2.67e-17 | 86.3 |
| Msa0274680 | MtrunA17_Chr4g0074871 | 27.891 | 147 | 105 | 1 | 119 | 265 | 333 | 478 | 1.75e-12 | 70.9 |
| Msa0274680 | MtrunA17_Chr1g0198221 | 27.431 | 288 | 177 | 10 | 6 | 270 | 13 | 291 | 1.22e-19 | 92.4 |
| Msa0274680 | MtrunA17_Chr1g0198221 | 27.972 | 286 | 173 | 8 | 10 | 276 | 74 | 345 | 4.70e-18 | 87.4 |
| Msa0274680 | MtrunA17_Chr1g0207821 | 29.231 | 260 | 145 | 11 | 10 | 241 | 66 | 314 | 4.73e-17 | 85.1 |
| Msa0274680 | MtrunA17_Chr2g0311721 | 28.814 | 177 | 107 | 5 | 74 | 240 | 24 | 191 | 9.95e-17 | 81.6 |
| Msa0274680 | MtrunA17_Chr2g0311721 | 28.889 | 180 | 124 | 4 | 109 | 286 | 8 | 185 | 4.22e-14 | 73.9 |
| Msa0274680 | MtrunA17_Chr2g0311721 | 25.862 | 232 | 157 | 7 | 13 | 241 | 21 | 240 | 2.77e-13 | 71.2 |
| Msa0274680 | MtrunA17_Chr1g0196221 | 23.875 | 289 | 184 | 8 | 57 | 310 | 7 | 294 | 3.91e-13 | 72.4 |
| Msa0274680 | MtrunA17_Chr4g0002171 | 27.397 | 219 | 129 | 9 | 2 | 195 | 222 | 435 | 6.79e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0274680 | AT5G18590.2 | 60.245 | 654 | 209 | 11 | 1 | 615 | 67 | 708 | 0.0 | 738 |
| Msa0274680 | AT5G18590.1 | 60.245 | 654 | 209 | 11 | 1 | 615 | 67 | 708 | 0.0 | 738 |
| Msa0274680 | AT3G05420.2 | 36.601 | 306 | 192 | 1 | 6 | 309 | 178 | 483 | 3.44e-68 | 234 |
| Msa0274680 | AT3G05420.1 | 36.601 | 306 | 192 | 1 | 6 | 309 | 177 | 482 | 3.48e-68 | 234 |
| Msa0274680 | AT5G27630.2 | 34.226 | 336 | 219 | 1 | 6 | 339 | 178 | 513 | 2.81e-66 | 227 |
| Msa0274680 | AT5G27630.1 | 36.275 | 306 | 193 | 1 | 6 | 309 | 178 | 483 | 5.63e-66 | 228 |
| Msa0274680 | AT5G27630.4 | 36.275 | 306 | 193 | 1 | 6 | 309 | 178 | 483 | 6.29e-66 | 228 |
| Msa0274680 | AT5G27630.3 | 36.275 | 306 | 193 | 1 | 6 | 309 | 178 | 483 | 6.74e-66 | 228 |
| Msa0274680 | AT5G04420.2 | 34.132 | 334 | 208 | 2 | 3 | 327 | 25 | 355 | 2.21e-59 | 207 |
| Msa0274680 | AT5G04420.1 | 34.132 | 334 | 208 | 2 | 3 | 327 | 25 | 355 | 2.21e-59 | 207 |
| Msa0274680 | AT5G04420.3 | 34.132 | 334 | 208 | 2 | 3 | 327 | 25 | 355 | 2.21e-59 | 207 |
| Msa0274680 | AT1G18610.1 | 32.189 | 233 | 140 | 6 | 5 | 228 | 70 | 293 | 1.74e-26 | 114 |
| Msa0274680 | AT1G18610.1 | 27.451 | 255 | 165 | 10 | 69 | 310 | 76 | 323 | 9.98e-18 | 87.4 |
| Msa0274680 | AT1G18610.1 | 27.488 | 211 | 135 | 6 | 4 | 204 | 119 | 321 | 3.03e-16 | 82.4 |
| Msa0274680 | AT1G18610.1 | 33.129 | 163 | 98 | 5 | 119 | 271 | 22 | 183 | 9.63e-16 | 80.9 |
| Msa0274680 | AT1G18610.1 | 31.875 | 160 | 99 | 4 | 73 | 224 | 27 | 184 | 1.08e-13 | 74.7 |
| Msa0274680 | AT1G18610.2 | 32.189 | 233 | 140 | 6 | 5 | 228 | 70 | 293 | 1.74e-26 | 114 |
| Msa0274680 | AT1G18610.2 | 27.451 | 255 | 165 | 10 | 69 | 310 | 76 | 323 | 9.98e-18 | 87.4 |
| Msa0274680 | AT1G18610.2 | 27.488 | 211 | 135 | 6 | 4 | 204 | 119 | 321 | 3.03e-16 | 82.4 |
| Msa0274680 | AT1G18610.2 | 33.129 | 163 | 98 | 5 | 119 | 271 | 22 | 183 | 9.63e-16 | 80.9 |
| Msa0274680 | AT1G18610.2 | 31.875 | 160 | 99 | 4 | 73 | 224 | 27 | 184 | 1.08e-13 | 74.7 |
| Msa0274680 | AT1G74150.4 | 26.923 | 286 | 190 | 6 | 5 | 280 | 51 | 327 | 2.07e-23 | 105 |
| Msa0274680 | AT1G74150.4 | 32.673 | 202 | 122 | 6 | 102 | 296 | 39 | 233 | 3.12e-16 | 82.4 |
| Msa0274680 | AT1G74150.1 | 26.923 | 286 | 190 | 6 | 5 | 280 | 67 | 343 | 2.61e-23 | 104 |
| Msa0274680 | AT1G74150.1 | 33.171 | 205 | 123 | 6 | 99 | 296 | 52 | 249 | 1.52e-17 | 86.7 |
| Msa0274680 | AT1G74150.2 | 26.923 | 286 | 190 | 6 | 5 | 280 | 67 | 343 | 2.66e-23 | 104 |
| Msa0274680 | AT1G74150.2 | 33.171 | 205 | 123 | 6 | 99 | 296 | 52 | 249 | 1.43e-17 | 86.7 |
| Msa0274680 | AT1G74150.3 | 28.077 | 260 | 168 | 6 | 5 | 254 | 67 | 317 | 4.49e-23 | 103 |
| Msa0274680 | AT1G74150.3 | 33.171 | 205 | 123 | 6 | 99 | 296 | 52 | 249 | 1.57e-17 | 86.7 |
| Msa0274680 | AT2G36360.3 | 25.858 | 379 | 237 | 14 | 5 | 357 | 12 | 372 | 1.73e-17 | 86.3 |
| Msa0274680 | AT2G36360.3 | 30.233 | 215 | 128 | 7 | 3 | 204 | 117 | 322 | 3.33e-13 | 72.8 |
| Msa0274680 | AT2G36360.2 | 26.644 | 289 | 178 | 10 | 5 | 269 | 12 | 290 | 1.80e-17 | 86.3 |
| Msa0274680 | AT2G36360.2 | 30.350 | 257 | 151 | 8 | 10 | 250 | 74 | 318 | 2.48e-17 | 85.9 |
| Msa0274680 | AT2G36360.2 | 30.233 | 215 | 128 | 7 | 3 | 204 | 117 | 322 | 3.36e-13 | 72.8 |
| Msa0274680 | AT2G36360.1 | 26.644 | 289 | 178 | 10 | 5 | 269 | 12 | 290 | 1.80e-17 | 86.3 |
| Msa0274680 | AT2G36360.1 | 30.350 | 257 | 151 | 8 | 10 | 250 | 74 | 318 | 2.48e-17 | 85.9 |
| Msa0274680 | AT2G36360.1 | 30.233 | 215 | 128 | 7 | 3 | 204 | 117 | 322 | 3.36e-13 | 72.8 |
| Msa0274680 | AT3G07720.1 | 28.571 | 196 | 123 | 5 | 74 | 261 | 26 | 212 | 2.49e-17 | 84.0 |
| Msa0274680 | AT3G07720.1 | 24.627 | 268 | 192 | 7 | 109 | 374 | 10 | 269 | 8.04e-14 | 73.6 |
| Msa0274680 | AT3G07720.1 | 25.523 | 239 | 169 | 4 | 3 | 241 | 13 | 242 | 1.07e-12 | 70.1 |
| Msa0274680 | AT2G36360.4 | 26.644 | 289 | 178 | 10 | 5 | 269 | 12 | 290 | 2.50e-17 | 85.9 |
| Msa0274680 | AT2G36360.4 | 30.350 | 257 | 151 | 8 | 10 | 250 | 74 | 318 | 2.93e-17 | 85.5 |
| Msa0274680 | AT2G36360.4 | 30.233 | 215 | 128 | 7 | 3 | 204 | 117 | 322 | 4.02e-13 | 72.8 |
| Msa0274680 | AT4G04670.1 | 27.459 | 244 | 161 | 6 | 3 | 243 | 315 | 545 | 9.80e-17 | 84.7 |
| Msa0274680 | AT4G04670.1 | 29.714 | 175 | 114 | 3 | 57 | 224 | 304 | 476 | 1.22e-13 | 75.1 |
| Msa0274680 | AT4G04670.1 | 25.658 | 152 | 112 | 1 | 114 | 265 | 317 | 467 | 1.57e-11 | 68.2 |
| Msa0274680 | AT5G50310.1 | 28.782 | 271 | 155 | 11 | 10 | 253 | 66 | 325 | 7.58e-16 | 81.6 |
| Msa0274680 | AT2G36360.5 | 24.796 | 367 | 198 | 11 | 10 | 357 | 74 | 381 | 1.17e-15 | 80.5 |
| Msa0274680 | AT2G36360.5 | 30.857 | 175 | 98 | 6 | 116 | 269 | 14 | 186 | 1.61e-14 | 77.0 |
| Msa0274680 | AT2G36360.5 | 30.233 | 215 | 128 | 7 | 3 | 204 | 126 | 331 | 3.59e-13 | 72.8 |
| Msa0274680 | AT1G74150.6 | 28.814 | 177 | 120 | 3 | 109 | 280 | 2 | 177 | 3.33e-15 | 78.6 |
| Msa0274680 | AT1G74150.6 | 28.571 | 154 | 101 | 3 | 74 | 223 | 18 | 166 | 5.98e-12 | 68.6 |
| Msa0274680 | AT1G74150.5 | 28.814 | 177 | 120 | 3 | 109 | 280 | 2 | 177 | 3.33e-15 | 78.6 |
| Msa0274680 | AT1G74150.5 | 28.571 | 154 | 101 | 3 | 74 | 223 | 18 | 166 | 5.98e-12 | 68.6 |
| Msa0274680 | AT3G16410.1 | 27.273 | 242 | 166 | 5 | 51 | 286 | 242 | 479 | 2.93e-14 | 76.6 |
| Msa0274680 | AT3G16410.1 | 24.473 | 237 | 166 | 6 | 7 | 241 | 309 | 534 | 3.23e-12 | 70.1 |
| Msa0274680 | AT5G48180.1 | 26.582 | 237 | 160 | 6 | 7 | 241 | 15 | 239 | 8.48e-14 | 73.2 |
| Msa0274680 | AT5G48180.1 | 27.041 | 196 | 125 | 6 | 74 | 261 | 24 | 209 | 1.25e-11 | 66.6 |
| Msa0274680 | AT5G48180.1 | 27.948 | 229 | 132 | 8 | 109 | 318 | 8 | 222 | 2.65e-11 | 65.9 |
| Msa0274680 | AT1G03445.1 | 27.749 | 191 | 111 | 6 | 69 | 233 | 30 | 219 | 9.28e-14 | 75.1 |
| Msa0274680 | AT1G03445.1 | 30.588 | 170 | 91 | 5 | 117 | 268 | 26 | 186 | 7.39e-12 | 68.9 |
| Msa0274680 | AT1G03445.2 | 27.749 | 191 | 111 | 6 | 69 | 233 | 30 | 219 | 1.11e-13 | 74.7 |
| Msa0274680 | AT1G03445.2 | 30.588 | 170 | 91 | 5 | 117 | 268 | 26 | 186 | 8.16e-12 | 68.9 |
| Msa0274680 | AT2G18915.1 | 31.783 | 258 | 137 | 14 | 10 | 241 | 333 | 577 | 1.42e-13 | 74.3 |
| Msa0274680 | AT2G18915.2 | 30.534 | 262 | 144 | 13 | 5 | 241 | 339 | 587 | 1.67e-13 | 73.9 |
| Msa0274680 | AT3G16400.2 | 29.050 | 179 | 125 | 2 | 109 | 286 | 153 | 330 | 8.77e-13 | 71.2 |
| Msa0274680 | AT3G16400.2 | 24.051 | 237 | 167 | 6 | 7 | 241 | 160 | 385 | 2.21e-11 | 67.0 |
| Msa0274680 | AT3G16400.1 | 29.050 | 179 | 125 | 2 | 109 | 286 | 153 | 330 | 8.77e-13 | 71.2 |
| Msa0274680 | AT3G16400.1 | 24.051 | 237 | 167 | 6 | 7 | 241 | 160 | 385 | 2.21e-11 | 67.0 |
| Msa0274680 | AT2G33070.1 | 26.141 | 241 | 170 | 4 | 51 | 286 | 94 | 331 | 2.22e-12 | 70.1 |
| Msa0274680 | AT2G33070.2 | 26.141 | 241 | 170 | 4 | 51 | 286 | 94 | 331 | 2.22e-12 | 70.1 |
| Msa0274680 | AT2G33070.3 | 28.249 | 177 | 125 | 2 | 111 | 286 | 158 | 333 | 9.92e-12 | 68.2 |
| Msa0274680 | AT1G51550.1 | 27.354 | 223 | 120 | 11 | 2 | 191 | 223 | 436 | 1.84e-11 | 67.4 |
Find 154 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTACTTTAATATTATT+TGG | 0.042815 | 2_3:-6539630 | Msa0274680:CDS |
| GAGCTTTGTGTCATCATTTC+TGG | 0.119377 | 2_3:+6535504 | None:intergenic |
| CTGTTCCTCCATATTGATTT+TGG | 0.161780 | 2_3:+6536741 | None:intergenic |
| TCCTCCCTGATAACAAAATT+TGG | 0.178023 | 2_3:-6536568 | Msa0274680:CDS |
| CTGTAATTGTAATTGAATTA+TGG | 0.197803 | 2_3:-6535273 | Msa0274680:three_prime_UTR |
| AGGAATTTCTTGTTGCATTT+GGG | 0.232869 | 2_3:-6538242 | Msa0274680:CDS |
| TATTACTATTAGGACATATA+TGG | 0.234014 | 2_3:-6535480 | Msa0274680:three_prime_UTR |
| ACTCTACTTTAATATTATTT+GGG | 0.246774 | 2_3:-6539629 | Msa0274680:CDS |
| CATTAACACTGCATCTTTAG+AGG | 0.255692 | 2_3:+6535419 | None:intergenic |
| GATAACAAAATTTGGCATTC+TGG | 0.261465 | 2_3:-6536560 | Msa0274680:CDS |
| AAGGAATTTCTTGTTGCATT+TGG | 0.266568 | 2_3:-6538243 | Msa0274680:CDS |
| TAGAGTTTGCATTTCGTTTA+GGG | 0.271535 | 2_3:+6542108 | None:intergenic |
| GTAGAGTTTGCATTTCGTTT+AGG | 0.274524 | 2_3:+6542107 | None:intergenic |
| CAATATGGAGGAACAGGTTT+TGG | 0.276025 | 2_3:-6536734 | Msa0274680:CDS |
| GGTACTAGTCGGTTGTCTTC+TGG | 0.281071 | 2_3:+6538067 | None:intergenic |
| TAATTTGACACCAGGTTTCT+TGG | 0.311604 | 2_3:-6540238 | Msa0274680:intron |
| AATTTGACACCAGGTTTCTT+GGG | 0.325115 | 2_3:-6540237 | Msa0274680:intron |
| TTTATACTAGAAGTCCTATT+AGG | 0.335863 | 2_3:-6542133 | None:intergenic |
| TCTCTGTTCGTACAAGATTC+TGG | 0.339134 | 2_3:-6537900 | Msa0274680:CDS |
| ACAAAGCTCATATTACTATT+AGG | 0.343163 | 2_3:-6535490 | Msa0274680:three_prime_UTR |
| ATGCAGTGTTAATGCATTAC+TGG | 0.349305 | 2_3:-6535410 | Msa0274680:three_prime_UTR |
| TTTCGTTTAGGGTGCCTAAT+AGG | 0.354777 | 2_3:+6542119 | None:intergenic |
| ATAGTGGTTGGTGGTGAATC+TGG | 0.354968 | 2_3:-6541434 | Msa0274680:CDS |
| CAGGTCCAGTAGAAGAAAAT+TGG | 0.371719 | 2_3:+6541950 | None:intergenic |
| TGATAGGATTGACAGGCATT+TGG | 0.374528 | 2_3:-6537814 | Msa0274680:CDS |
| AAATAAAATGTTCACCTTGT+TGG | 0.379564 | 2_3:+6538663 | None:intergenic |
| TCTAAAATCTCATTTCTGTA+TGG | 0.380222 | 2_3:+6535348 | None:intergenic |
| AGCTTGCAAGGGTCATAGTT+TGG | 0.382174 | 2_3:-6541165 | Msa0274680:intron |
| CCAGGAATCGACAAAATATC+TGG | 0.383294 | 2_3:-6540179 | Msa0274680:intron |
| CTCGTGTGCATCTGATATCC+AGG | 0.391162 | 2_3:+6536769 | None:intergenic |
| TTGCACATGAAAAGGTTTCC+TGG | 0.391252 | 2_3:+6535571 | None:intergenic |
| GGCACTAAGTGGTATATTAC+AGG | 0.393302 | 2_3:-6539059 | Msa0274680:CDS |
| CAAAATCAATATGGAGGAAC+AGG | 0.395128 | 2_3:-6536740 | Msa0274680:CDS |
| CGGAGTGGACAATGTTAGAT+AGG | 0.395718 | 2_3:+6536365 | None:intergenic |
| GCAGTGGCCATACAACTGTT+AGG | 0.396047 | 2_3:-6539656 | Msa0274680:CDS |
| ATCTGTAACGGCAGGCTACT+TGG | 0.402706 | 2_3:+6541191 | None:intergenic |
| AAGTATAGATCCTGGACCTT+TGG | 0.407645 | 2_3:+6538046 | None:intergenic |
| CATCAGGTAGTTCAGAGAAT+TGG | 0.408902 | 2_3:-6541912 | Msa0274680:five_prime_UTR |
| TGGCATTCTGGAAGCACAAT+TGG | 0.415991 | 2_3:-6536548 | Msa0274680:CDS |
| AAGAATTCAATGTAGATGAT+AGG | 0.423853 | 2_3:-6537830 | Msa0274680:CDS |
| ATGTTCAAGCCTTACATTGT+CGG | 0.432027 | 2_3:+6536345 | None:intergenic |
| TCATATTTGATCTGAACAAT+TGG | 0.432756 | 2_3:+6535382 | None:intergenic |
| TGGATGGTGTTGTCAATTGC+AGG | 0.433137 | 2_3:-6541892 | Msa0274680:CDS |
| ACACCTCATTGCACATGAAA+AGG | 0.437302 | 2_3:+6535563 | None:intergenic |
| GATGCCACGTGGTTGAATCT+TGG | 0.440918 | 2_3:+6539326 | None:intergenic |
| GAGAGGAGCCAAAATCAATA+TGG | 0.441578 | 2_3:-6536749 | Msa0274680:CDS |
| GAGATAAGTAACTGTGCATC+AGG | 0.444693 | 2_3:-6541928 | Msa0274680:five_prime_UTR |
| CCTTGTGCTGCACAAGGACC+AGG | 0.446536 | 2_3:+6538268 | None:intergenic |
| GATGGCATGGTCAAGAATAA+AGG | 0.449810 | 2_3:-6539132 | Msa0274680:CDS |
| CCTGAAAACATAAATTCATC+AGG | 0.456851 | 2_3:-6536640 | Msa0274680:CDS |
| CAAACAGAGACTGCAATCAA+TGG | 0.463940 | 2_3:-6535612 | Msa0274680:CDS |
| TTGTCCACTCCGACAATGTA+AGG | 0.465835 | 2_3:-6536354 | Msa0274680:CDS |
| TAATTACATACATAGGATCT+AGG | 0.468547 | 2_3:+6541856 | None:intergenic |
| TTCTGAAAGGAAATCTTTGT+CGG | 0.471559 | 2_3:-6537925 | Msa0274680:CDS |
| ATATTACAGGCGGTGGAAGC+AGG | 0.479398 | 2_3:-6539046 | Msa0274680:CDS |
| GTTACAGATTCCAGCTTGCA+AGG | 0.482796 | 2_3:-6541177 | Msa0274680:CDS |
| AGTTTGCCCTAACAGTTGTA+TGG | 0.485004 | 2_3:+6539649 | None:intergenic |
| CCTTGTGCAGCACAAGGAAA+AGG | 0.486212 | 2_3:-6538262 | Msa0274680:CDS |
| GTGCAATGAGGTGTTCTTGA+TGG | 0.487352 | 2_3:-6535554 | Msa0274680:exon |
| TGCACATGAAAAGGTTTCCT+GGG | 0.490413 | 2_3:+6535572 | None:intergenic |
| ATTACTATTAGGACATATAT+GGG | 0.496650 | 2_3:-6535479 | Msa0274680:three_prime_UTR |
| GACAATGTTAGATAGGTTGT+TGG | 0.501250 | 2_3:+6536372 | None:intergenic |
| AACAGGGTCGATAAAACGTT+GGG | 0.503162 | 2_3:+6537983 | None:intergenic |
| AGTCGGTTGTCTTCTGGAAG+CGG | 0.503270 | 2_3:+6538073 | None:intergenic |
| TGAATTACTGAGAGAGAAGC+TGG | 0.504426 | 2_3:-6536422 | Msa0274680:CDS |
| AACACTTACGTGCAGTGAAG+TGG | 0.505581 | 2_3:+6539537 | None:intergenic |
| GACCGAGTGCTGGTCACTCA+TGG | 0.511048 | 2_3:-6540048 | Msa0274680:CDS |
| CATGATCAAATTGACTGTCA+TGG | 0.516143 | 2_3:+6537856 | None:intergenic |
| AACAATGGCTGACACGCTAC+AGG | 0.516177 | 2_3:-6536449 | Msa0274680:CDS |
| AAACTATGACCCTTGCAAGC+TGG | 0.516811 | 2_3:+6541167 | None:intergenic |
| AGATGAAAGTTCTTTCCCTC+AGG | 0.517228 | 2_3:-6537790 | Msa0274680:intron |
| TTACAATTACAGTTAATGAC+TGG | 0.517332 | 2_3:+6535284 | None:intergenic |
| TTCCATCCATCACCAAGAGC+TGG | 0.517381 | 2_3:-6539101 | Msa0274680:CDS |
| GTATTCACTCGACTTTGAAA+CGG | 0.519278 | 2_3:-6539237 | Msa0274680:intron |
| CTCTACTTTAATATTATTTG+GGG | 0.519326 | 2_3:-6539628 | Msa0274680:CDS |
| GTTGGTGGTGAATCTGGAAA+TGG | 0.520081 | 2_3:-6541428 | Msa0274680:CDS |
| TGAGGGTGGCGATGAAGACT+TGG | 0.522080 | 2_3:-6535446 | Msa0274680:three_prime_UTR |
| CAGTGGCCATACAACTGTTA+GGG | 0.523904 | 2_3:-6539655 | Msa0274680:CDS |
| GGAAGCAAAGGGAGACATAC+CGG | 0.526021 | 2_3:-6540027 | Msa0274680:intron |
| ATGTAGATGATAGGATTGAC+AGG | 0.527338 | 2_3:-6537821 | Msa0274680:CDS |
| ACACCACAGCAACCAGCTCT+TGG | 0.531616 | 2_3:+6539089 | None:intergenic |
| TTCCATGAGTGACCAGCACT+CGG | 0.537533 | 2_3:+6540046 | None:intergenic |
| GGAATTTCTTGTTGCATTTG+GGG | 0.539505 | 2_3:-6538241 | Msa0274680:CDS |
| ACATTTCAGATTCTTTGAAA+CGG | 0.539772 | 2_3:-6535325 | Msa0274680:three_prime_UTR |
| GATGCACAGTTACTTATCTC+AGG | 0.542667 | 2_3:+6541931 | None:intergenic |
| CTGGTCACTCATGGAAGCAA+AGG | 0.547648 | 2_3:-6540039 | Msa0274680:CDS |
| CAGCAACCAGCTCTTGGTGA+TGG | 0.549757 | 2_3:+6539095 | None:intergenic |
| TTTAGGATGATGGGGTTGAA+GGG | 0.550340 | 2_3:-6542002 | Msa0274680:intron |
| AACCAGCTCTTGGTGATGGA+TGG | 0.554218 | 2_3:+6539099 | None:intergenic |
| CACGTGGCATCTCTTTATGA+TGG | 0.554865 | 2_3:-6539314 | Msa0274680:CDS |
| AAGTGGTATATTACAGGCGG+TGG | 0.557210 | 2_3:-6539053 | Msa0274680:CDS |
| ATTTGACACCAGGTTTCTTG+GGG | 0.558080 | 2_3:-6540236 | Msa0274680:intron |
| GGGGAGAAGATTGCAAAAGG+AGG | 0.563418 | 2_3:-6539608 | Msa0274680:CDS |
| TTTCTTATATCCAGATGGCA+TGG | 0.566220 | 2_3:-6539145 | Msa0274680:intron |
| CAATTAAACGTGGTTCTGAA+AGG | 0.566360 | 2_3:-6537938 | Msa0274680:CDS |
| AGAGTCATTTCTAAGTTGAG+TGG | 0.578930 | 2_3:+6538007 | None:intergenic |
| CCGACTAGTACCAAAGGTCC+AGG | 0.580716 | 2_3:-6538056 | Msa0274680:CDS |
| TGGATTGTTAGACGATGTGC+AGG | 0.584889 | 2_3:-6541408 | Msa0274680:intron |
| CCTGGACCTTTGGTACTAGT+CGG | 0.585499 | 2_3:+6538056 | None:intergenic |
| CTCGTGGTAGAAAGTGATCA+CGG | 0.585915 | 2_3:-6536670 | Msa0274680:CDS |
| CCTGGTCCTTGTGCAGCACA+AGG | 0.587673 | 2_3:-6538268 | Msa0274680:CDS |
| AAAATCGAGCACCTACTCCC+AGG | 0.588115 | 2_3:-6535589 | Msa0274680:CDS |
| CATACATAGGATCTAGGAGT+AGG | 0.590371 | 2_3:+6541862 | None:intergenic |
| GATGGGGTTGAAGGGTCAAG+TGG | 0.591764 | 2_3:-6541994 | Msa0274680:five_prime_UTR |
| TTGTTGGTAGTGATAGAAGA+AGG | 0.594047 | 2_3:+6538679 | None:intergenic |
| TGGTCACTCATGGAAGCAAA+GGG | 0.594851 | 2_3:-6540038 | Msa0274680:CDS |
| AAGCTGGAATCTGTAACGGC+AGG | 0.596939 | 2_3:+6541183 | None:intergenic |
| TCACCAAGAGCTGGTTGCTG+TGG | 0.597396 | 2_3:-6539092 | Msa0274680:CDS |
| CTGTCATGGAAGATGTTGGT+AGG | 0.597877 | 2_3:+6537870 | None:intergenic |
| TTGATCTCAAGTCCTTGACA+TGG | 0.599083 | 2_3:-6539563 | Msa0274680:CDS |
| CAACAGGGTCGATAAAACGT+TGG | 0.602316 | 2_3:+6537982 | None:intergenic |
| CATCTTATTCTCAATGACAC+AGG | 0.607094 | 2_3:+6541457 | None:intergenic |
| TTACAGATTCCAGCTTGCAA+GGG | 0.607096 | 2_3:-6541176 | Msa0274680:CDS |
| GTGAAGTGGAAGCCATGTCA+AGG | 0.607359 | 2_3:+6539551 | None:intergenic |
| TGCAGAGTTAGCTCAAGAAG+AGG | 0.607697 | 2_3:-6536395 | Msa0274680:CDS |
| TTGCAAGCTGGAATCTGTAA+CGG | 0.609492 | 2_3:+6541179 | None:intergenic |
| CATTGAGAATAAGATGATAG+TGG | 0.617742 | 2_3:-6541450 | Msa0274680:CDS |
| ACAACAAATCAAAATGACCC+TGG | 0.618312 | 2_3:-6536787 | Msa0274680:CDS |
| TTGACACAGAGACCGAGTGC+TGG | 0.619406 | 2_3:-6540058 | Msa0274680:CDS |
| TGAAAAGGTTTCCTGGGAGT+AGG | 0.622222 | 2_3:+6535578 | None:intergenic |
| TCGTGTGCATCTGATATCCA+GGG | 0.622732 | 2_3:+6536770 | None:intergenic |
| GAATTTCTTGTTGCATTTGG+GGG | 0.629851 | 2_3:-6538240 | Msa0274680:CDS |
| GAGAATAAGATGATAGTGGT+TGG | 0.633657 | 2_3:-6541446 | Msa0274680:CDS |
| TCTTGGCAGATTGCTCGCAG+TGG | 0.636047 | 2_3:-6539672 | Msa0274680:intron |
| AATAAGATGATAGTGGTTGG+TGG | 0.636096 | 2_3:-6541443 | Msa0274680:CDS |
| AGGGTCAAGTGGTCATTCTG+AGG | 0.636554 | 2_3:-6541983 | Msa0274680:five_prime_UTR |
| CTAGCATCTGCAATTAAACG+TGG | 0.637684 | 2_3:-6537948 | Msa0274680:CDS |
| TCGTGGTAGAAAGTGATCAC+GGG | 0.638127 | 2_3:-6536669 | Msa0274680:CDS |
| GGATGGTGTTGTCAATTGCA+GGG | 0.638261 | 2_3:-6541891 | Msa0274680:CDS |
| ACAAGAAATGGATAAAACAA+TGG | 0.639188 | 2_3:-6536464 | Msa0274680:CDS |
| AAAAGGCACTCCTCATTGGA+GGG | 0.642366 | 2_3:-6540211 | Msa0274680:CDS |
| TTGACTGTCATGGAAGATGT+TGG | 0.644032 | 2_3:+6537866 | None:intergenic |
| ATTGGAGGGAAAACAGACCC+AGG | 0.645160 | 2_3:-6540197 | Msa0274680:CDS |
| CGTGATCACTTTCTACCACG+AGG | 0.645412 | 2_3:+6536671 | None:intergenic |
| TCTACTTTAATATTATTTGG+GGG | 0.647440 | 2_3:-6539627 | Msa0274680:CDS |
| TGTCATGGAAGATGTTGGTA+GGG | 0.647629 | 2_3:+6537871 | None:intergenic |
| AGGAGCCAAAATCAATATGG+AGG | 0.652394 | 2_3:-6536746 | Msa0274680:CDS |
| TTTGACACCAGGTTTCTTGG+GGG | 0.653476 | 2_3:-6540235 | Msa0274680:intron |
| ACGTGGTTGAATCTTGGAGA+AGG | 0.655883 | 2_3:+6539332 | None:intergenic |
| TTCTTCTATCACTACCAACA+AGG | 0.656018 | 2_3:-6538677 | Msa0274680:intron |
| AGGTAGTTCAGAGAATTGGA+TGG | 0.659831 | 2_3:-6541908 | Msa0274680:exon |
| GGATATCAGATGCACACGAG+AGG | 0.670333 | 2_3:-6536766 | Msa0274680:CDS |
| AGACAACCGACTAGTACCAA+AGG | 0.673944 | 2_3:-6538062 | Msa0274680:CDS |
| CAAGCCTTACATTGTCGGAG+TGG | 0.682789 | 2_3:+6536350 | None:intergenic |
| TGGTCAAGAATAAAGGTGCG+TGG | 0.685381 | 2_3:-6539125 | Msa0274680:CDS |
| TTACTGAGAGAGAAGCTGGT+CGG | 0.685529 | 2_3:-6536418 | Msa0274680:CDS |
| TGTAAGGCTTGAACATGATG+TGG | 0.686712 | 2_3:-6536338 | Msa0274680:CDS |
| GATGGTGTTGTCAATTGCAG+GGG | 0.689441 | 2_3:-6541890 | Msa0274680:CDS |
| TTGGTAGTGATAGAAGAAGG+AGG | 0.691034 | 2_3:+6538682 | None:intergenic |
| ACTAAGTGGTATATTACAGG+CGG | 0.714772 | 2_3:-6539056 | Msa0274680:CDS |
| CATCATAAAGAGATGCCACG+TGG | 0.722412 | 2_3:+6539315 | None:intergenic |
| TTCTCCAAGATTCAACCACG+TGG | 0.739104 | 2_3:-6539330 | Msa0274680:CDS |
| GTAGTGATAGAAGAAGGAGG+CGG | 0.739186 | 2_3:+6538685 | None:intergenic |
| GTATAGCTTAGATGACACAG+TGG | 0.805097 | 2_3:+6541220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATATTGACTAATTATT+TGG | - | chr2_3:6535985-6536004 | Msa0274680:intron | 10.0% |
| !!! | ATTTTTCTATACTTAAAAAT+CGG | - | chr2_3:6536825-6536844 | Msa0274680:intron | 10.0% |
| !! | AGAAAAATAAAATTATTACA+TGG | - | chr2_3:6537534-6537553 | Msa0274680:intron | 10.0% |
| !!! | ATTTTTTTTTTGTTTAGAAA+AGG | - | chr2_3:6537797-6537816 | Msa0274680:CDS | 10.0% |
| !!! | TATAAAATAATTTTAGAAGT+TGG | - | chr2_3:6539798-6539817 | Msa0274680:intron | 10.0% |
| !! | TTTCAATTTAATTACAAAAA+TGG | - | chr2_3:6541237-6541256 | Msa0274680:CDS | 10.0% |
| !! | ATATAAAACATAAAATTACA+TGG | + | chr2_3:6541456-6541475 | None:intergenic | 10.0% |
| !!! | TAAATTTTGACAAATTTTCA+TGG | - | chr2_3:6536055-6536074 | Msa0274680:intron | 15.0% |
| !!! | AAATTTATCTTCGAATTTTA+AGG | + | chr2_3:6536755-6536774 | None:intergenic | 15.0% |
| !!! | TTTTTTGCTTTTTTTTAGTA+TGG | - | chr2_3:6537214-6537233 | Msa0274680:intron | 15.0% |
| !!! | TTTTTGCTTTTTTTTAGTAT+GGG | - | chr2_3:6537215-6537234 | Msa0274680:intron | 15.0% |
| !!! | ATTTTCACAATCTAAATATT+AGG | - | chr2_3:6537359-6537378 | Msa0274680:intron | 15.0% |
| !! | AACTCTACTTTAATATTATT+TGG | - | chr2_3:6537669-6537688 | Msa0274680:intron | 15.0% |
| !! | ACTCTACTTTAATATTATTT+GGG | - | chr2_3:6537670-6537689 | Msa0274680:intron | 15.0% |
| !!! | GGTAAAATTCTTTTTATATT+TGG | - | chr2_3:6538006-6538025 | Msa0274680:CDS | 15.0% |
| !!! | AAAATTCTTTTTATATTTGG+AGG | - | chr2_3:6538009-6538028 | Msa0274680:CDS | 15.0% |
| !!! | TGAATATTTAATTTGCATAT+TGG | + | chr2_3:6538134-6538153 | None:intergenic | 15.0% |
| !!! | ATGATATTCTAAAAAATGAA+TGG | - | chr2_3:6538576-6538595 | Msa0274680:intron | 15.0% |
| !! | AATAGAAAAAAATTGATTGT+AGG | + | chr2_3:6539733-6539752 | None:intergenic | 15.0% |
| !! | AACATTCTATAATGAAAAAT+TGG | - | chr2_3:6540139-6540158 | Msa0274680:intron | 15.0% |
| !! | TTCAAATTTGTATATATTGT+TGG | - | chr2_3:6540271-6540290 | Msa0274680:intron | 15.0% |
| !!! | TTTTAAAAACAAACAAGAAA+TGG | - | chr2_3:6540823-6540842 | Msa0274680:intron | 15.0% |
| !!! | ATATATGACATTTCATTTTA+TGG | - | chr2_3:6541021-6541040 | Msa0274680:intron | 15.0% |
| !!! | TTTCTATATTTTTGTGTATT+TGG | - | chr2_3:6541183-6541202 | Msa0274680:CDS | 15.0% |
| !! | GAAAATATAACAAAAAATAC+AGG | - | chr2_3:6541343-6541362 | Msa0274680:intron | 15.0% |
| !!! | TATAAAAAATGCAAATTTTG+TGG | + | chr2_3:6541572-6541591 | None:intergenic | 15.0% |
| !!! | TTAAGTTGTTTATCCAAATA+TGG | - | chr2_3:6535727-6535746 | Msa0274680:intron | 20.0% |
| !! | TTTCAAAATGACCTTAATAA+TGG | - | chr2_3:6536215-6536234 | Msa0274680:intron | 20.0% |
| !! | TGCTCTTAAAATATACTTAT+TGG | + | chr2_3:6536387-6536406 | None:intergenic | 20.0% |
| !! | TAAGAGATTTACAAGAAAAA+AGG | - | chr2_3:6536789-6536808 | Msa0274680:CDS | 20.0% |
| !!! | TTTAAGTGCATATCTTTTAA+TGG | - | chr2_3:6536973-6536992 | Msa0274680:intron | 20.0% |
| !! | GAAATTAAATTATGACATGT+TGG | + | chr2_3:6537564-6537583 | None:intergenic | 20.0% |
| !! | TCTTTCATTTAAATCTCTAT+AGG | - | chr2_3:6537582-6537601 | Msa0274680:intron | 20.0% |
| !! | CTCTACTTTAATATTATTTG+GGG | - | chr2_3:6537671-6537690 | Msa0274680:intron | 20.0% |
| !! | TCTACTTTAATATTATTTGG+GGG | - | chr2_3:6537672-6537691 | Msa0274680:intron | 20.0% |
| !! | TGAAAGATTATATTACTTCA+GGG | - | chr2_3:6537936-6537955 | Msa0274680:CDS | 20.0% |
| !! | TTCATCACAATATAACTAAA+CGG | + | chr2_3:6538100-6538119 | None:intergenic | 20.0% |
| !!! | AATAAGCATAAAAGTTTTCA+AGG | - | chr2_3:6538384-6538403 | Msa0274680:intron | 20.0% |
| !!! | ATTTTAAGTTCAAATGTCAT+TGG | - | chr2_3:6538439-6538458 | Msa0274680:intron | 20.0% |
| !! | AATTTCATATTTGAAAACTG+AGG | + | chr2_3:6538910-6538929 | None:intergenic | 20.0% |
| !! | AAACCTTGATATATATGAAA+TGG | + | chr2_3:6539637-6539656 | None:intergenic | 20.0% |
| !! | GAAAATAACATATGACATAT+AGG | + | chr2_3:6540119-6540138 | None:intergenic | 20.0% |
| !! | GAATGATTGGAATAAAATAA+GGG | + | chr2_3:6540382-6540401 | None:intergenic | 20.0% |
| !! | AAAGTATGTTTATTGAATCA+TGG | + | chr2_3:6540404-6540423 | None:intergenic | 20.0% |
| !!! | ATTCAATATTAGCATTTTAC+AGG | + | chr2_3:6541060-6541079 | None:intergenic | 20.0% |
| !!! | TAACAAAAAATACAGGTTTT+TGG | - | chr2_3:6541350-6541369 | Msa0274680:intron | 20.0% |
| !! | TTCGTAATTAAATATGTAGA+AGG | - | chr2_3:6541378-6541397 | Msa0274680:intron | 20.0% |
| !!! | TTTTTTTTTCTTCAGGATTT+TGG | - | chr2_3:6541426-6541445 | Msa0274680:CDS | 20.0% |
| !! | TATGATCAATTATGTTGTTA+AGG | - | chr2_3:6541473-6541492 | Msa0274680:intron | 20.0% |
| !! | ATGATCAATTATGTTGTTAA+GGG | - | chr2_3:6541474-6541493 | Msa0274680:intron | 20.0% |
| !! | TATTACTATTAGGACATATA+TGG | - | chr2_3:6541819-6541838 | Msa0274680:intron | 20.0% |
| !! | ATTACTATTAGGACATATAT+GGG | - | chr2_3:6541820-6541839 | Msa0274680:intron | 20.0% |
| !! | CTGTAATTGTAATTGAATTA+TGG | - | chr2_3:6542026-6542045 | Msa0274680:intron | 20.0% |
| !! | TGTGGTTATTACTAAGTTTT+TGG | - | chr2_3:6535269-6535288 | Msa0274680:three_prime_UTR | 25.0% |
| ! | TAATTACATACATAGGATCT+AGG | + | chr2_3:6535446-6535465 | None:intergenic | 25.0% |
| ! | AGATCCTATGTATGTAATTA+TGG | - | chr2_3:6535446-6535465 | Msa0274680:three_prime_UTR | 25.0% |
| ! | GATCCTATGTATGTAATTAT+GGG | - | chr2_3:6535447-6535466 | Msa0274680:three_prime_UTR | 25.0% |
| ! | ATTCCCATAATTACATACAT+AGG | + | chr2_3:6535453-6535472 | None:intergenic | 25.0% |
| ! | CAACATACTATTCATTTCAT+TGG | - | chr2_3:6536025-6536044 | Msa0274680:intron | 25.0% |
| ! | AGTTATGAATGAAATTCGAT+TGG | + | chr2_3:6536352-6536371 | None:intergenic | 25.0% |
| ! | TTTATTTGATATGGAGAGAA+AGG | - | chr2_3:6536466-6536485 | Msa0274680:CDS | 25.0% |
| ! | ATTATATGAAGTGCATACAA+AGG | + | chr2_3:6536628-6536647 | None:intergenic | 25.0% |
| !!! | ATTATTTCTCCTCTTTTTTC+TGG | + | chr2_3:6536698-6536717 | None:intergenic | 25.0% |
| ! | CAAGAAAAAAGGAAAAGAAA+AGG | - | chr2_3:6536800-6536819 | Msa0274680:CDS | 25.0% |
| ! | GTAAGTATAACAACATAGAA+TGG | + | chr2_3:6536949-6536968 | None:intergenic | 25.0% |
| ! | AAAAGATATGCACTTAAATC+AGG | + | chr2_3:6536971-6536990 | None:intergenic | 25.0% |
| ! | ATTACATTTGCAAATGACAT+GGG | + | chr2_3:6537152-6537171 | None:intergenic | 25.0% |
| ! | TATTACATTTGCAAATGACA+TGG | + | chr2_3:6537153-6537172 | None:intergenic | 25.0% |
| !!! | TTTTGTAGAAAGTTGATCTT+GGG | - | chr2_3:6537322-6537341 | Msa0274680:intron | 25.0% |
| ! | AAGGTTAGAAATCAAAAGTT+TGG | - | chr2_3:6537816-6537835 | Msa0274680:CDS | 25.0% |
| !! | ATCAAAAGTTTGGATTTTGA+CGG | - | chr2_3:6537826-6537845 | Msa0274680:CDS | 25.0% |
| ! | AAGTAATATAATCTTTCAGG+AGG | + | chr2_3:6537934-6537953 | None:intergenic | 25.0% |
| ! | CTGAAGTAATATAATCTTTC+AGG | + | chr2_3:6537937-6537956 | None:intergenic | 25.0% |
| ! | CTGAAAGATTATATTACTTC+AGG | - | chr2_3:6537935-6537954 | Msa0274680:CDS | 25.0% |
| ! | GAAAGATTATATTACTTCAG+GGG | - | chr2_3:6537937-6537956 | Msa0274680:CDS | 25.0% |
| ! | TTTGCATATTGGAAATCAAT+AGG | + | chr2_3:6538123-6538142 | None:intergenic | 25.0% |
| ! | ATTCATTTCTTATATCCAGA+TGG | - | chr2_3:6538149-6538168 | Msa0274680:intron | 25.0% |
| !!! | TTACTTTTATTAACTTCCTC+AGG | + | chr2_3:6538419-6538438 | None:intergenic | 25.0% |
| ! | TTCAAATGTCATTGGAAATT+TGG | - | chr2_3:6538447-6538466 | Msa0274680:intron | 25.0% |
| ! | CAGGAAAGTTAAAATTTGTA+AGG | + | chr2_3:6538523-6538542 | None:intergenic | 25.0% |
| ! | AAATAAAATGTTCACCTTGT+TGG | + | chr2_3:6538639-6538658 | None:intergenic | 25.0% |
| ! | TATAAGTGCAAAAGACTAAA+TGG | + | chr2_3:6538754-6538773 | None:intergenic | 25.0% |
| !! | TATAACTCAGATTTTGTTCA+AGG | - | chr2_3:6538770-6538789 | Msa0274680:intron | 25.0% |
| ! | AAGAATTCAATGTAGATGAT+AGG | - | chr2_3:6539469-6539488 | Msa0274680:intron | 25.0% |
| !!! | AATGTGGTTTTAATGTATGA+TGG | - | chr2_3:6539568-6539587 | Msa0274680:CDS | 25.0% |
| ! | CAACCATTTCATATATATCA+AGG | - | chr2_3:6539631-6539650 | Msa0274680:CDS | 25.0% |
| !!! | CTATTACTCATTTTTATCCT+AGG | - | chr2_3:6539748-6539767 | Msa0274680:intron | 25.0% |
| !!! | TCATTTTTATCCTAGGATTT+GGG | - | chr2_3:6539755-6539774 | Msa0274680:intron | 25.0% |
| !!! | AATTTTAGAAGTTGGAAAGT+TGG | - | chr2_3:6539806-6539825 | Msa0274680:intron | 25.0% |
| !!! | TAAAAGTTGATGAATATTGC+AGG | - | chr2_3:6539829-6539848 | Msa0274680:intron | 25.0% |
| ! | GAAATCTTTGCAAATTGAAT+TGG | + | chr2_3:6539963-6539982 | None:intergenic | 25.0% |
| ! | ATTCAATTTGCAAAGATTTC+TGG | - | chr2_3:6539963-6539982 | Msa0274680:intron | 25.0% |
| !!! | AAAGATTTCTGGTAGAAAAT+GGG | - | chr2_3:6539974-6539993 | Msa0274680:intron | 25.0% |
| ! | GTAACAGTTAAAGAAATTGA+GGG | - | chr2_3:6540022-6540041 | Msa0274680:intron | 25.0% |
| !! | CACTTTTAATGTCTATACTA+CGG | + | chr2_3:6540088-6540107 | None:intergenic | 25.0% |
| ! | GTATATATTGTTGGAAAATC+AGG | - | chr2_3:6540280-6540299 | Msa0274680:intron | 25.0% |
| ! | TTCAGATCTTCCTTTATTAT+AGG | - | chr2_3:6540348-6540367 | Msa0274680:intron | 25.0% |
| ! | GGAATAAGTACCTATAATAA+AGG | + | chr2_3:6540361-6540380 | None:intergenic | 25.0% |
| ! | GGAATGATTGGAATAAAATA+AGG | + | chr2_3:6540383-6540402 | None:intergenic | 25.0% |
| ! | TTATTGAATCATGGAATGAT+TGG | + | chr2_3:6540395-6540414 | None:intergenic | 25.0% |
| !! | GATTCTTTTCGAAAAAATCT+AGG | - | chr2_3:6540596-6540615 | Msa0274680:intron | 25.0% |
| !! | TTTCGAAAAAATCTAGGTTT+TGG | - | chr2_3:6540602-6540621 | Msa0274680:intron | 25.0% |
| !!! | AATGCCAAATTTTGTTATCA+GGG | + | chr2_3:6540738-6540757 | None:intergenic | 25.0% |
| ! | ACAAGAAATGGATAAAACAA+TGG | - | chr2_3:6540835-6540854 | Msa0274680:intron | 25.0% |
| !!! | TGTTTTAGATGATACACAAA+AGG | - | chr2_3:6540997-6541016 | Msa0274680:intron | 25.0% |
| !! | ACAAAACTTTAAAAACAGCA+AGG | + | chr2_3:6541277-6541296 | None:intergenic | 25.0% |
| ! | AATCCTGAAGAAAAAAAAAC+TGG | + | chr2_3:6541425-6541444 | None:intergenic | 25.0% |
| ! | ACAAAGCTCATATTACTATT+AGG | - | chr2_3:6541809-6541828 | Msa0274680:intron | 25.0% |
| ! | TCATATTTGATCTGAACAAT+TGG | + | chr2_3:6541920-6541939 | None:intergenic | 25.0% |
| !! | TCTAAAATCTCATTTCTGTA+TGG | + | chr2_3:6541954-6541973 | None:intergenic | 25.0% |
| !! | ACATTTCAGATTCTTTGAAA+CGG | - | chr2_3:6541974-6541993 | Msa0274680:five_prime_UTR | 25.0% |
| ! | TTACAATTACAGTTAATGAC+TGG | + | chr2_3:6542018-6542037 | None:intergenic | 25.0% |
| TAGAGTTTGCATTTCGTTTA+GGG | + | chr2_3:6535194-6535213 | None:intergenic | 30.0% | |
| !!! | CTAAGTTTTTGGCTTCTTTT+AGG | - | chr2_3:6535280-6535299 | Msa0274680:three_prime_UTR | 30.0% |
| TTTCTATAAGCTCTTCTGAA+CGG | + | chr2_3:6535554-6535573 | None:intergenic | 30.0% | |
| ACTACTGATCTGTTATTCAT+TGG | - | chr2_3:6535807-6535826 | Msa0274680:intron | 30.0% | |
| CATTGAGAATAAGATGATAG+TGG | - | chr2_3:6535849-6535868 | Msa0274680:intron | 30.0% | |
| ATACTATTCATTTCATTGGC+AGG | - | chr2_3:6536029-6536048 | Msa0274680:intron | 30.0% | |
| TTTCATTCATAACTGACGAT+AGG | - | chr2_3:6536358-6536377 | Msa0274680:CDS | 30.0% | |
| TGTTATATGATTCTCTGTGT+TGG | - | chr2_3:6536434-6536453 | Msa0274680:CDS | 30.0% | |
| AAACCATATATGAGAACAAC+AGG | + | chr2_3:6536540-6536559 | None:intergenic | 30.0% | |
| !!! | TTGCAAATTTTAACTGCATC+TGG | + | chr2_3:6536859-6536878 | None:intergenic | 30.0% |
| TTGCAAATACAAACCTATCT+CGG | - | chr2_3:6536873-6536892 | Msa0274680:intron | 30.0% | |
| AAGCATAAGAGAATTGAGAT+AGG | + | chr2_3:6537036-6537055 | None:intergenic | 30.0% | |
| ! | CTTGATAATAATTTGACACC+AGG | - | chr2_3:6537053-6537072 | Msa0274680:intron | 30.0% |
| TTACATTTGCAAATGACATG+GGG | + | chr2_3:6537151-6537170 | None:intergenic | 30.0% | |
| ! | TGCATTTTCAATATTCCTAC+CGG | + | chr2_3:6537294-6537313 | None:intergenic | 30.0% |
| AGATCAACTTTCTACAAAAC+AGG | + | chr2_3:6537321-6537340 | None:intergenic | 30.0% | |
| !! | GTTTTGTAGAAAGTTGATCT+TGG | - | chr2_3:6537321-6537340 | Msa0274680:intron | 30.0% |
| ! | TTTGTAGAAAGTTGATCTTG+GGG | - | chr2_3:6537323-6537342 | Msa0274680:intron | 30.0% |
| ! | GATATGTTGACTATTCTGAT+AGG | + | chr2_3:6537412-6537431 | None:intergenic | 30.0% |
| TCAGAATAGTCAACATATCA+TGG | - | chr2_3:6537413-6537432 | Msa0274680:intron | 30.0% | |
| GATATTTACATGCATGAAGA+AGG | - | chr2_3:6537435-6537454 | Msa0274680:intron | 30.0% | |
| ACTACTTAGCTAATCAAATC+AGG | + | chr2_3:6537474-6537493 | None:intergenic | 30.0% | |
| ! | ATTTGATTAGCTAAGTAGTC+AGG | - | chr2_3:6537475-6537494 | Msa0274680:intron | 30.0% |
| !! | TCAAAAGTTTGGATTTTGAC+GGG | - | chr2_3:6537827-6537846 | Msa0274680:CDS | 30.0% |
| TATATCATGTTGTTGTGAGT+AGG | + | chr2_3:6537857-6537876 | None:intergenic | 30.0% | |
| CAGATTAAATTTCAGATGCA+TGG | + | chr2_3:6537889-6537908 | None:intergenic | 30.0% | |
| TGCAAGGGAAATAACAAAAA+CGG | - | chr2_3:6538350-6538369 | Msa0274680:intron | 30.0% | |
| ! | TCATTGGAAATTTGGAATGA+TGG | - | chr2_3:6538455-6538474 | Msa0274680:intron | 30.0% |
| ! | AACTTTCCTGTATACTTTTC+AGG | - | chr2_3:6538533-6538552 | Msa0274680:intron | 30.0% |
| TAATGATACGTAAACATGAC+AGG | + | chr2_3:6538664-6538683 | None:intergenic | 30.0% | |
| AGTACTAAAATCCCACAATT+TGG | - | chr2_3:6538804-6538823 | Msa0274680:intron | 30.0% | |
| AAGGAATTTCTTGTTGCATT+TGG | - | chr2_3:6539056-6539075 | Msa0274680:CDS | 30.0% | |
| AGGAATTTCTTGTTGCATTT+GGG | - | chr2_3:6539057-6539076 | Msa0274680:CDS | 30.0% | |
| !!! | TGTTTTTCAAGTATAGATCC+TGG | + | chr2_3:6539264-6539283 | None:intergenic | 30.0% |
| ! | CTAGATTTTGTATAGCAACA+GGG | + | chr2_3:6539335-6539354 | None:intergenic | 30.0% |
| ! | TTCTGAAAGGAAATCTTTGT+CGG | - | chr2_3:6539374-6539393 | Msa0274680:intron | 30.0% |
| ATTAAAACCACATTAGAGCA+TGG | + | chr2_3:6539562-6539581 | None:intergenic | 30.0% | |
| AGGAAATGAAGGAAACTAAT+AGG | + | chr2_3:6539692-6539711 | None:intergenic | 30.0% | |
| !! | CTCATTTTTATCCTAGGATT+TGG | - | chr2_3:6539754-6539773 | Msa0274680:intron | 30.0% |
| ATCATTAAAACCCAAATCCT+AGG | + | chr2_3:6539768-6539787 | None:intergenic | 30.0% | |
| AGAGATTAGGATTTGAAGAA+GGG | - | chr2_3:6539860-6539879 | Msa0274680:intron | 30.0% | |
| ! | GGAGCAGAATTTAATGTTTT+TGG | - | chr2_3:6539901-6539920 | Msa0274680:intron | 30.0% |
| !!! | TAATGTTTTTGGTGAGCTTT+CGG | - | chr2_3:6539912-6539931 | Msa0274680:intron | 30.0% |
| !! | CAAAGATTTCTGGTAGAAAA+TGG | - | chr2_3:6539973-6539992 | Msa0274680:intron | 30.0% |
| CGTAACAGTTAAAGAAATTG+AGG | - | chr2_3:6540021-6540040 | Msa0274680:intron | 30.0% | |
| TGATTCTGCAATAACTTCTT+GGG | + | chr2_3:6540058-6540077 | None:intergenic | 30.0% | |
| TTGATTCTGCAATAACTTCT+TGG | + | chr2_3:6540059-6540078 | None:intergenic | 30.0% | |
| TCACTTCTCATCAAAGTAAT+TGG | + | chr2_3:6540167-6540186 | None:intergenic | 30.0% | |
| ! | CCTGATGAATTTATGTTTTC+AGG | + | chr2_3:6540662-6540681 | None:intergenic | 30.0% |
| CCTGAAAACATAAATTCATC+AGG | - | chr2_3:6540659-6540678 | Msa0274680:intron | 30.0% | |
| !! | GAATGCCAAATTTTGTTATC+AGG | + | chr2_3:6540739-6540758 | None:intergenic | 30.0% |
| GATAACAAAATTTGGCATTC+TGG | - | chr2_3:6540739-6540758 | Msa0274680:intron | 30.0% | |
| ATTGAATGTGTTAACTTAGC+AGG | - | chr2_3:6541073-6541092 | Msa0274680:intron | 30.0% | |
| GAAAAAAAAACTGGCAAGTT+TGG | + | chr2_3:6541416-6541435 | None:intergenic | 30.0% | |
| !!! | TTGCCAGTTTTTTTTTCTTC+AGG | - | chr2_3:6541419-6541438 | Msa0274680:CDS | 30.0% |
| ! | TGATATTTTGTCACCATACT+TGG | - | chr2_3:6541609-6541628 | Msa0274680:intron | 30.0% |
| ! | GATATTTTGTCACCATACTT+GGG | - | chr2_3:6541610-6541629 | Msa0274680:intron | 30.0% |
| ATGTTTAAGAAACCCAAGTA+TGG | + | chr2_3:6541625-6541644 | None:intergenic | 30.0% | |
| GTAGAGTTTGCATTTCGTTT+AGG | + | chr2_3:6535195-6535214 | None:intergenic | 35.0% | |
| TTCAGCTTCATTCTTTGTGT+TGG | - | chr2_3:6535225-6535244 | Msa0274680:three_prime_UTR | 35.0% | |
| TCAGCTTCATTCTTTGTGTT+GGG | - | chr2_3:6535226-6535245 | Msa0274680:three_prime_UTR | 35.0% | |
| !!! | TTTGGCTTCTTTTAGGATGA+TGG | - | chr2_3:6535287-6535306 | Msa0274680:three_prime_UTR | 35.0% |
| !!! | TTGGCTTCTTTTAGGATGAT+GGG | - | chr2_3:6535288-6535307 | Msa0274680:three_prime_UTR | 35.0% |
| ! | GATTGCCAATTTTCTTCTAC+TGG | - | chr2_3:6535344-6535363 | Msa0274680:three_prime_UTR | 35.0% |
| ! | GAAGTTTTCATAAGCTATCC+TGG | + | chr2_3:6535603-6535622 | None:intergenic | 35.0% |
| CATCTTATTCTCAATGACAC+AGG | + | chr2_3:6535845-6535864 | None:intergenic | 35.0% | |
| !! | GAGAATAAGATGATAGTGGT+TGG | - | chr2_3:6535853-6535872 | Msa0274680:intron | 35.0% |
| !! | AATAAGATGATAGTGGTTGG+TGG | - | chr2_3:6535856-6535875 | Msa0274680:intron | 35.0% |
| !!! | TGAGGGAACATTTCTAGTTT+TGG | - | chr2_3:6535918-6535937 | Msa0274680:intron | 35.0% |
| ! | AGAGCATCATGCCATTATTA+AGG | + | chr2_3:6536229-6536248 | None:intergenic | 35.0% |
| AATCCACCCTTAGTAAATTG+AGG | - | chr2_3:6536296-6536315 | Msa0274680:intron | 35.0% | |
| TAGCAGCCTCAATTTACTAA+GGG | + | chr2_3:6536305-6536324 | None:intergenic | 35.0% | |
| GAATCATATAACACCGTATG+AGG | + | chr2_3:6536427-6536446 | None:intergenic | 35.0% | |
| AGGATGTTCTACAGGAATTT+AGG | - | chr2_3:6536486-6536505 | Msa0274680:CDS | 35.0% | |
| TGTCCTGTTGTTCTCATATA+TGG | - | chr2_3:6536534-6536553 | Msa0274680:CDS | 35.0% | |
| CACTTCATATAATCGATGAC+TGG | - | chr2_3:6536635-6536654 | Msa0274680:CDS | 35.0% | |
| ! | ACTGGCATAACGATGATTTT+TGG | - | chr2_3:6536653-6536672 | Msa0274680:CDS | 35.0% |
| !!! | CTCTTTTTTCTGGTTAACTC+GGG | + | chr2_3:6536688-6536707 | None:intergenic | 35.0% |
| !!! | CCTCTTTTTTCTGGTTAACT+CGG | + | chr2_3:6536689-6536708 | None:intergenic | 35.0% |
| TAATTTGACACCAGGTTTCT+TGG | - | chr2_3:6537061-6537080 | Msa0274680:intron | 35.0% | |
| AATTTGACACCAGGTTTCTT+GGG | - | chr2_3:6537062-6537081 | Msa0274680:intron | 35.0% | |
| !!! | CAGATATTTTGTCGATTCCT+GGG | + | chr2_3:6537122-6537141 | None:intergenic | 35.0% |
| CTGACCAAATATCTTGTTCT+TGG | - | chr2_3:6537610-6537629 | Msa0274680:intron | 35.0% | |
| TCTGCCAAGAACAAGATATT+TGG | + | chr2_3:6537617-6537636 | None:intergenic | 35.0% | |
| ! | GTATTCACTCGACTTTGAAA+CGG | - | chr2_3:6538062-6538081 | Msa0274680:CDS | 35.0% |
| TTTCTTATATCCAGATGGCA+TGG | - | chr2_3:6538154-6538173 | Msa0274680:intron | 35.0% | |
| ACTAAGTGGTATATTACAGG+CGG | - | chr2_3:6538243-6538262 | Msa0274680:CDS | 35.0% | |
| GGTAAAGAAATGAGAGACAT+GGG | + | chr2_3:6538312-6538331 | None:intergenic | 35.0% | |
| AGGTAAAGAAATGAGAGACA+TGG | + | chr2_3:6538313-6538332 | None:intergenic | 35.0% | |
| !! | TTGTTGGTAGTGATAGAAGA+AGG | + | chr2_3:6538623-6538642 | None:intergenic | 35.0% |
| TTCTTCTATCACTACCAACA+AGG | - | chr2_3:6538622-6538641 | Msa0274680:intron | 35.0% | |
| ! | TCAGATTTTGTTCAAGGTAG+TGG | - | chr2_3:6538776-6538795 | Msa0274680:intron | 35.0% |
| ! | CAGATTTTGTTCAAGGTAGT+GGG | - | chr2_3:6538777-6538796 | Msa0274680:intron | 35.0% |
| ! | AATTTGGCCTTCTGGTTAAA+TGG | - | chr2_3:6538820-6538839 | Msa0274680:intron | 35.0% |
| TGAACTTCCATTTAACCAGA+AGG | + | chr2_3:6538830-6538849 | None:intergenic | 35.0% | |
| ! | GAAGTTCACTAGACATGTTT+TGG | - | chr2_3:6538842-6538861 | Msa0274680:intron | 35.0% |
| GGAAAATTAAATCCTAGCGA+AGG | + | chr2_3:6538889-6538908 | None:intergenic | 35.0% | |
| ATGATTTCCGTTGTATTAGC+AGG | - | chr2_3:6539001-6539020 | Msa0274680:intron | 35.0% | |
| TGATTTCCGTTGTATTAGCA+GGG | - | chr2_3:6539002-6539021 | Msa0274680:intron | 35.0% | |
| CTAAAACCCTGCTAATACAA+CGG | + | chr2_3:6539011-6539030 | None:intergenic | 35.0% | |
| GGAATTTCTTGTTGCATTTG+GGG | - | chr2_3:6539058-6539077 | Msa0274680:CDS | 35.0% | |
| GAATTTCTTGTTGCATTTGG+GGG | - | chr2_3:6539059-6539078 | Msa0274680:CDS | 35.0% | |
| !!! | CTGATTTGATGCCTCTTTTT+TGG | + | chr2_3:6539087-6539106 | None:intergenic | 35.0% |
| !! | CAAAAAAGAGGCATCAAATC+AGG | - | chr2_3:6539085-6539104 | Msa0274680:CDS | 35.0% |
| !! | TTATTTTTCTTGGCTGTGAC+AGG | - | chr2_3:6539173-6539192 | Msa0274680:intron | 35.0% |
| ! | AGAGTCATTTCTAAGTTGAG+TGG | + | chr2_3:6539295-6539314 | None:intergenic | 35.0% |
| ! | GCTAGATTTTGTATAGCAAC+AGG | + | chr2_3:6539336-6539355 | None:intergenic | 35.0% |
| !! | CAATTAAACGTGGTTCTGAA+AGG | - | chr2_3:6539361-6539380 | Msa0274680:intron | 35.0% |
| CATGATCAAATTGACTGTCA+TGG | + | chr2_3:6539446-6539465 | None:intergenic | 35.0% | |
| ATGTAGATGATAGGATTGAC+AGG | - | chr2_3:6539478-6539497 | Msa0274680:intron | 35.0% | |
| ! | AGAACTTCTGTTTTACCTGA+GGG | + | chr2_3:6539527-6539546 | None:intergenic | 35.0% |
| ! | AAGAACTTCTGTTTTACCTG+AGG | + | chr2_3:6539528-6539547 | None:intergenic | 35.0% |
| ATCATAACCATGCTCTAATG+TGG | - | chr2_3:6539552-6539571 | Msa0274680:CDS | 35.0% | |
| ! | TCAAGGTTTGATTGTGCTTT+TGG | - | chr2_3:6539648-6539667 | Msa0274680:CDS | 35.0% |
| TAATAGGCAGAAAAATCTCG+AGG | + | chr2_3:6539676-6539695 | None:intergenic | 35.0% | |
| GTGCTTAACTTAGGAAATGA+AGG | + | chr2_3:6539703-6539722 | None:intergenic | 35.0% | |
| GGATTGTATGTGCTTAACTT+AGG | + | chr2_3:6539712-6539731 | None:intergenic | 35.0% | |
| GAGAGATTAGGATTTGAAGA+AGG | - | chr2_3:6539859-6539878 | Msa0274680:intron | 35.0% | |
| !!! | CTTTTTTTGTCGTCAAAGGA+GGG | + | chr2_3:6540211-6540230 | None:intergenic | 35.0% |
| !!! | ACTTTTTTTGTCGTCAAAGG+AGG | + | chr2_3:6540212-6540231 | None:intergenic | 35.0% |
| !!! | GTCACTTTTTTTGTCGTCAA+AGG | + | chr2_3:6540215-6540234 | None:intergenic | 35.0% |
| TATCACAAGTATTAGCACCA+GGG | + | chr2_3:6540237-6540256 | None:intergenic | 35.0% | |
| TTATCACAAGTATTAGCACC+AGG | + | chr2_3:6540238-6540257 | None:intergenic | 35.0% | |
| ACAACAAATCAAAATGACCC+TGG | - | chr2_3:6540512-6540531 | Msa0274680:intron | 35.0% | |
| !!! | CTGTTCCTCCATATTGATTT+TGG | + | chr2_3:6540561-6540580 | None:intergenic | 35.0% |
| CAAAATCAATATGGAGGAAC+AGG | - | chr2_3:6540559-6540578 | Msa0274680:intron | 35.0% | |
| TCCTCCCTGATAACAAAATT+TGG | - | chr2_3:6540731-6540750 | Msa0274680:intron | 35.0% | |
| GACAATGTTAGATAGGTTGT+TGG | + | chr2_3:6540930-6540949 | None:intergenic | 35.0% | |
| ATGTTCAAGCCTTACATTGT+CGG | + | chr2_3:6540957-6540976 | None:intergenic | 35.0% | |
| ATAGAGTTGTGATCAATCCA+AGG | + | chr2_3:6541164-6541183 | None:intergenic | 35.0% | |
| CAATTATGTTGTTAAGGGTG+AGG | - | chr2_3:6541479-6541498 | Msa0274680:intron | 35.0% | |
| ! | AAACCTTTTCATGTGCAATG+AGG | - | chr2_3:6541733-6541752 | Msa0274680:intron | 35.0% |
| !! | TATATGGGAAGTGCATTTTG+AGG | - | chr2_3:6541835-6541854 | Msa0274680:intron | 35.0% |
| !! | ATATGGGAAGTGCATTTTGA+GGG | - | chr2_3:6541836-6541855 | Msa0274680:intron | 35.0% |
| CATTAACACTGCATCTTTAG+AGG | + | chr2_3:6541883-6541902 | None:intergenic | 35.0% | |
| ATGCAGTGTTAATGCATTAC+TGG | - | chr2_3:6541889-6541908 | Msa0274680:CDS | 35.0% | |
| ! | TTTCGTTTAGGGTGCCTAAT+AGG | + | chr2_3:6535183-6535202 | None:intergenic | 40.0% |
| !!! | CTTTGTGTTGGGTTGAGTTT+TGG | - | chr2_3:6535237-6535256 | Msa0274680:three_prime_UTR | 40.0% |
| !!! | TGGCTTCTTTTAGGATGATG+GGG | - | chr2_3:6535289-6535308 | Msa0274680:three_prime_UTR | 40.0% |
| !!! | TTTTAGGATGATGGGGTTGA+AGG | - | chr2_3:6535296-6535315 | Msa0274680:three_prime_UTR | 40.0% |
| !! | TTTAGGATGATGGGGTTGAA+GGG | - | chr2_3:6535297-6535316 | Msa0274680:three_prime_UTR | 40.0% |
| CAGGTCCAGTAGAAGAAAAT+TGG | + | chr2_3:6535352-6535371 | None:intergenic | 40.0% | |
| GATGCACAGTTACTTATCTC+AGG | + | chr2_3:6535371-6535390 | None:intergenic | 40.0% | |
| GAGATAAGTAACTGTGCATC+AGG | - | chr2_3:6535371-6535390 | Msa0274680:three_prime_UTR | 40.0% | |
| CATCAGGTAGTTCAGAGAAT+TGG | - | chr2_3:6535387-6535406 | Msa0274680:three_prime_UTR | 40.0% | |
| AGGTAGTTCAGAGAATTGGA+TGG | - | chr2_3:6535391-6535410 | Msa0274680:three_prime_UTR | 40.0% | |
| CATACATAGGATCTAGGAGT+AGG | + | chr2_3:6535440-6535459 | None:intergenic | 40.0% | |
| GACATATCTATAAGCTCTCC+AGG | - | chr2_3:6535582-6535601 | Msa0274680:CDS | 40.0% | |
| CGTATGACGAAGACCATATT+TGG | + | chr2_3:6535743-6535762 | None:intergenic | 40.0% | |
| GTATAGCTTAGATGACACAG+TGG | + | chr2_3:6536082-6536101 | None:intergenic | 40.0% | |
| TTGCAAGCTGGAATCTGTAA+CGG | + | chr2_3:6536123-6536142 | None:intergenic | 40.0% | |
| TTACAGATTCCAGCTTGCAA+GGG | - | chr2_3:6536123-6536142 | Msa0274680:intron | 40.0% | |
| TGATGCTCTCATCATAGACA+TGG | - | chr2_3:6536240-6536259 | Msa0274680:intron | 40.0% | |
| GTAGCAGCCTCAATTTACTA+AGG | + | chr2_3:6536306-6536325 | None:intergenic | 40.0% | |
| TGTCATGTTGATGCCTCATA+CGG | - | chr2_3:6536411-6536430 | Msa0274680:CDS | 40.0% | |
| CCGAGTTAACCAGAAAAAAG+AGG | - | chr2_3:6536686-6536705 | Msa0274680:CDS | 40.0% | |
| CAAATACAAACCTATCTCGG+AGG | - | chr2_3:6536876-6536895 | Msa0274680:intron | 40.0% | |
| AAACCTATCTCGGAGGAAAA+TGG | - | chr2_3:6536883-6536902 | Msa0274680:intron | 40.0% | |
| GGAGGAAAATGGAGAGTTTA+GGG | - | chr2_3:6536894-6536913 | Msa0274680:intron | 40.0% | |
| ATTTGACACCAGGTTTCTTG+GGG | - | chr2_3:6537063-6537082 | Msa0274680:intron | 40.0% | |
| !!! | CCAGATATTTTGTCGATTCC+TGG | + | chr2_3:6537123-6537142 | None:intergenic | 40.0% |
| CCAGGAATCGACAAAATATC+TGG | - | chr2_3:6537120-6537139 | Msa0274680:intron | 40.0% | |
| CTTTGTCCTGATTCATGTTG+TGG | - | chr2_3:6537174-6537193 | Msa0274680:intron | 40.0% | |
| AGAACTCCACAACATGAATC+AGG | + | chr2_3:6537183-6537202 | None:intergenic | 40.0% | |
| TTACATGCATGAAGAAGGTG+TGG | - | chr2_3:6537440-6537459 | Msa0274680:intron | 40.0% | |
| AGTTTGCCCTAACAGTTGTA+TGG | + | chr2_3:6537653-6537672 | None:intergenic | 40.0% | |
| TTGATCTCAAGTCCTTGACA+TGG | - | chr2_3:6537736-6537755 | Msa0274680:intron | 40.0% | |
| TTATTCTTGACCATGCCATC+TGG | + | chr2_3:6538167-6538186 | None:intergenic | 40.0% | |
| GATGGCATGGTCAAGAATAA+AGG | - | chr2_3:6538167-6538186 | Msa0274680:intron | 40.0% | |
| ! | GTGTTTTATGTGGCACTAAG+TGG | - | chr2_3:6538229-6538248 | Msa0274680:CDS | 40.0% |
| GGCACTAAGTGGTATATTAC+AGG | - | chr2_3:6538240-6538259 | Msa0274680:CDS | 40.0% | |
| ! | GCAGTTAGCGTTGAAAGAAA+AGG | + | chr2_3:6538333-6538352 | None:intergenic | 40.0% |
| TTCTTTCAACGCTAACTGCA+AGG | - | chr2_3:6538334-6538353 | Msa0274680:intron | 40.0% | |
| TCTTTCAACGCTAACTGCAA+GGG | - | chr2_3:6538335-6538354 | Msa0274680:intron | 40.0% | |
| ! | TTCAAGGTTTTTCTCACCTG+AGG | - | chr2_3:6538400-6538419 | Msa0274680:intron | 40.0% |
| ! | CCATGTCCTGAAAAGTATAC+AGG | + | chr2_3:6538542-6538561 | None:intergenic | 40.0% |
| !! | CCTGTATACTTTTCAGGACA+TGG | - | chr2_3:6538539-6538558 | Msa0274680:intron | 40.0% |
| !! | TTGGTAGTGATAGAAGAAGG+AGG | + | chr2_3:6538620-6538639 | None:intergenic | 40.0% |
| TAACCAGAAGGCCAAATTGT+GGG | + | chr2_3:6538818-6538837 | None:intergenic | 40.0% | |
| TTAACCAGAAGGCCAAATTG+TGG | + | chr2_3:6538819-6538838 | None:intergenic | 40.0% | |
| TACTGATGAAAACCTTCGCT+AGG | - | chr2_3:6538874-6538893 | Msa0274680:intron | 40.0% | |
| ATTTGGGGGATCCAAAAAAG+AGG | - | chr2_3:6539073-6539092 | Msa0274680:CDS | 40.0% | |
| AAGTATAGATCCTGGACCTT+TGG | + | chr2_3:6539256-6539275 | None:intergenic | 40.0% | |
| AACAGGGTCGATAAAACGTT+GGG | + | chr2_3:6539319-6539338 | None:intergenic | 40.0% | |
| CTAGCATCTGCAATTAAACG+TGG | - | chr2_3:6539351-6539370 | Msa0274680:intron | 40.0% | |
| TCTCTGTTCGTACAAGATTC+TGG | - | chr2_3:6539399-6539418 | Msa0274680:intron | 40.0% | |
| TGTCATGGAAGATGTTGGTA+GGG | + | chr2_3:6539431-6539450 | None:intergenic | 40.0% | |
| TTGACTGTCATGGAAGATGT+TGG | + | chr2_3:6539436-6539455 | None:intergenic | 40.0% | |
| TGATAGGATTGACAGGCATT+TGG | - | chr2_3:6539485-6539504 | Msa0274680:intron | 40.0% | |
| AGATGAAAGTTCTTTCCCTC+AGG | - | chr2_3:6539509-6539528 | Msa0274680:intron | 40.0% | |
| GGATTTGAAGAAGGGAAAAG+TGG | - | chr2_3:6539868-6539887 | Msa0274680:intron | 40.0% | |
| ! | GGGAAAAGTGGAGACTTTTT+AGG | - | chr2_3:6539880-6539899 | Msa0274680:intron | 40.0% |
| TGTCTTCCTGCATATACTTC+AGG | - | chr2_3:6540478-6540497 | Msa0274680:intron | 40.0% | |
| GAGAGGAGCCAAAATCAATA+TGG | - | chr2_3:6540550-6540569 | Msa0274680:intron | 40.0% | |
| AGGAGCCAAAATCAATATGG+AGG | - | chr2_3:6540553-6540572 | Msa0274680:intron | 40.0% | |
| ! | CAATATGGAGGAACAGGTTT+TGG | - | chr2_3:6540565-6540584 | Msa0274680:intron | 40.0% |
| !! | GCCAAATTTTGTTATCAGGG+AGG | + | chr2_3:6540735-6540754 | None:intergenic | 40.0% |
| TGAATTACTGAGAGAGAAGC+TGG | - | chr2_3:6540877-6540896 | Msa0274680:intron | 40.0% | |
| TGTAAGGCTTGAACATGATG+TGG | - | chr2_3:6540961-6540980 | Msa0274680:intron | 40.0% | |
| ! | ACATGATGTGGCTTTTCTGA+AGG | - | chr2_3:6540973-6540992 | Msa0274680:intron | 40.0% |
| ! | GTTCAGAAGTACACAATGAG+TGG | + | chr2_3:6541516-6541535 | None:intergenic | 40.0% |
| !!! | GCAATCTGTTTTGACTGCAT+AGG | - | chr2_3:6541648-6541667 | Msa0274680:intron | 40.0% |
| CAAACAGAGACTGCAATCAA+TGG | - | chr2_3:6541687-6541706 | Msa0274680:intron | 40.0% | |
| TGCACATGAAAAGGTTTCCT+GGG | + | chr2_3:6541730-6541749 | None:intergenic | 40.0% | |
| TTGCACATGAAAAGGTTTCC+TGG | + | chr2_3:6541731-6541750 | None:intergenic | 40.0% | |
| ACACCTCATTGCACATGAAA+AGG | + | chr2_3:6541739-6541758 | None:intergenic | 40.0% | |
| ! | GAGCTTTGTGTCATCATTTC+TGG | + | chr2_3:6541798-6541817 | None:intergenic | 40.0% |
| !!! | GAGTTTTGGAACAGTGAGTG+TGG | - | chr2_3:6535251-6535270 | Msa0274680:three_prime_UTR | 45.0% |
| !! | TGGATGGTGTTGTCAATTGC+AGG | - | chr2_3:6535407-6535426 | Msa0274680:three_prime_UTR | 45.0% |
| !! | GGATGGTGTTGTCAATTGCA+GGG | - | chr2_3:6535408-6535427 | Msa0274680:three_prime_UTR | 45.0% |
| !! | GATGGTGTTGTCAATTGCAG+GGG | - | chr2_3:6535409-6535428 | Msa0274680:three_prime_UTR | 45.0% |
| !! | ATAGTGGTTGGTGGTGAATC+TGG | - | chr2_3:6535865-6535884 | Msa0274680:intron | 45.0% |
| !! | GTTGGTGGTGAATCTGGAAA+TGG | - | chr2_3:6535871-6535890 | Msa0274680:intron | 45.0% |
| TGGATTGTTAGACGATGTGC+AGG | - | chr2_3:6535891-6535910 | Msa0274680:intron | 45.0% | |
| GTTACAGATTCCAGCTTGCA+AGG | - | chr2_3:6536122-6536141 | Msa0274680:intron | 45.0% | |
| AAACTATGACCCTTGCAAGC+TGG | + | chr2_3:6536135-6536154 | None:intergenic | 45.0% | |
| AGCTTGCAAGGGTCATAGTT+TGG | - | chr2_3:6536134-6536153 | Msa0274680:intron | 45.0% | |
| CAGCCTCAATTTACTAAGGG+TGG | + | chr2_3:6536302-6536321 | None:intergenic | 45.0% | |
| GGAGAGAAAGGATGTTCTAC+AGG | - | chr2_3:6536478-6536497 | Msa0274680:CDS | 45.0% | |
| ! | TCTCCATTTTCCTCCGAGAT+AGG | + | chr2_3:6536889-6536908 | None:intergenic | 45.0% |
| CGGAGGAAAATGGAGAGTTT+AGG | - | chr2_3:6536893-6536912 | Msa0274680:intron | 45.0% | |
| TTTGACACCAGGTTTCTTGG+GGG | - | chr2_3:6537064-6537083 | Msa0274680:intron | 45.0% | |
| !! | AAAAAGGCACTCCTCATTGG+AGG | - | chr2_3:6537087-6537106 | Msa0274680:intron | 45.0% |
| !! | AAAAGGCACTCCTCATTGGA+GGG | - | chr2_3:6537088-6537107 | Msa0274680:intron | 45.0% |
| TGGTCACTCATGGAAGCAAA+GGG | - | chr2_3:6537261-6537280 | Msa0274680:intron | 45.0% | |
| CAGTGGCCATACAACTGTTA+GGG | - | chr2_3:6537644-6537663 | Msa0274680:intron | 45.0% | |
| TTGGGGGAGAAGATTGCAAA+AGG | - | chr2_3:6537688-6537707 | Msa0274680:intron | 45.0% | |
| AACACTTACGTGCAGTGAAG+TGG | + | chr2_3:6537765-6537784 | None:intergenic | 45.0% | |
| TCTTTCAGGAGGTAGTACGA+GGG | + | chr2_3:6537923-6537942 | None:intergenic | 45.0% | |
| ATCTTTCAGGAGGTAGTACG+AGG | + | chr2_3:6537924-6537943 | None:intergenic | 45.0% | |
| ACGTGGTTGAATCTTGGAGA+AGG | + | chr2_3:6537970-6537989 | None:intergenic | 45.0% | |
| TTCTCCAAGATTCAACCACG+TGG | - | chr2_3:6537969-6537988 | Msa0274680:CDS | 45.0% | |
| CATCATAAAGAGATGCCACG+TGG | + | chr2_3:6537987-6538006 | None:intergenic | 45.0% | |
| CACGTGGCATCTCTTTATGA+TGG | - | chr2_3:6537985-6538004 | Msa0274680:CDS | 45.0% | |
| ! | TGGTCAAGAATAAAGGTGCG+TGG | - | chr2_3:6538174-6538193 | Msa0274680:intron | 45.0% |
| ! | GGTTGCTGTGGTGTTTTATG+TGG | - | chr2_3:6538219-6538238 | Msa0274680:CDS | 45.0% |
| AAGTGGTATATTACAGGCGG+TGG | - | chr2_3:6538246-6538265 | Msa0274680:CDS | 45.0% | |
| GTAGTGATAGAAGAAGGAGG+CGG | + | chr2_3:6538617-6538636 | None:intergenic | 45.0% | |
| ! | AATCCCACAATTTGGCCTTC+TGG | - | chr2_3:6538812-6538831 | Msa0274680:intron | 45.0% |
| !! | GTATTAGCAGGGTTTTAGCC+TGG | - | chr2_3:6539013-6539032 | Msa0274680:intron | 45.0% |
| ! | TTTTTCTTGGCTGTGACAGG+TGG | - | chr2_3:6539176-6539195 | Msa0274680:intron | 45.0% |
| AGACAACCGACTAGTACCAA+AGG | - | chr2_3:6539237-6539256 | Msa0274680:intron | 45.0% | |
| CAACAGGGTCGATAAAACGT+TGG | + | chr2_3:6539320-6539339 | None:intergenic | 45.0% | |
| CTGTCATGGAAGATGTTGGT+AGG | + | chr2_3:6539432-6539451 | None:intergenic | 45.0% | |
| GCAGGAGTTTGTGAGAGATT+AGG | - | chr2_3:6539847-6539866 | Msa0274680:intron | 45.0% | |
| ! | AGAAGTGACCCTGATGATGA+GGG | - | chr2_3:6540179-6540198 | Msa0274680:intron | 45.0% |
| GACGACAAAAAAAGTGACCC+TGG | - | chr2_3:6540217-6540236 | Msa0274680:CDS | 45.0% | |
| TCGTGTGCATCTGATATCCA+GGG | + | chr2_3:6540532-6540551 | None:intergenic | 45.0% | |
| !! | AGGAACAGGTTTTGGCATCT+GGG | - | chr2_3:6540573-6540592 | Msa0274680:intron | 45.0% |
| !!! | TCTAGGTTTTGGAAACCTCG+TGG | - | chr2_3:6540613-6540632 | Msa0274680:intron | 45.0% |
| CTCGTGGTAGAAAGTGATCA+CGG | - | chr2_3:6540629-6540648 | Msa0274680:intron | 45.0% | |
| TCGTGGTAGAAAGTGATCAC+GGG | - | chr2_3:6540630-6540649 | Msa0274680:intron | 45.0% | |
| ! | TGGCATTCTGGAAGCACAAT+TGG | - | chr2_3:6540751-6540770 | Msa0274680:intron | 45.0% |
| TTACTGAGAGAGAAGCTGGT+CGG | - | chr2_3:6540881-6540900 | Msa0274680:intron | 45.0% | |
| TGCAGAGTTAGCTCAAGAAG+AGG | - | chr2_3:6540904-6540923 | Msa0274680:intron | 45.0% | |
| CGGAGTGGACAATGTTAGAT+AGG | + | chr2_3:6540937-6540956 | None:intergenic | 45.0% | |
| TTGTCCACTCCGACAATGTA+AGG | - | chr2_3:6540945-6540964 | Msa0274680:intron | 45.0% | |
| CAGGAATTGCACTCTACAAG+AGG | - | chr2_3:6541092-6541111 | Msa0274680:intron | 45.0% | |
| TCTACAAGAGGAGTTCTTGC+AGG | - | chr2_3:6541104-6541123 | Msa0274680:intron | 45.0% | |
| TCCAATTGCAGGTACATCCT+TGG | - | chr2_3:6541144-6541163 | Msa0274680:intron | 45.0% | |
| TCCAAGGATGTACCTGCAAT+TGG | + | chr2_3:6541148-6541167 | None:intergenic | 45.0% | |
| TGTTAAGGGTGAGGAATCTG+AGG | - | chr2_3:6541488-6541507 | Msa0274680:intron | 45.0% | |
| TGAAAAGGTTTCCTGGGAGT+AGG | + | chr2_3:6541724-6541743 | None:intergenic | 45.0% | |
| ! | GTGCAATGAGGTGTTCTTGA+TGG | - | chr2_3:6541745-6541764 | Msa0274680:intron | 45.0% |
| !! | AAAATATAATTTATTTGATA+TGG | - | chr2_3:6536457-6536476 | Msa0274680:CDS | 5.0% |
| !!! | TTAATATTTTTTTTTTCTTT+TGG | - | chr2_3:6536601-6536620 | Msa0274680:CDS | 5.0% |
| AGGGTCAAGTGGTCATTCTG+AGG | - | chr2_3:6535316-6535335 | Msa0274680:three_prime_UTR | 50.0% | |
| ATCTGTAACGGCAGGCTACT+TGG | + | chr2_3:6536111-6536130 | None:intergenic | 50.0% | |
| AAGCTGGAATCTGTAACGGC+AGG | + | chr2_3:6536119-6536138 | None:intergenic | 50.0% | |
| ! | CCTTTTTCCCCCAAGAAACC+TGG | + | chr2_3:6537074-6537093 | None:intergenic | 50.0% |
| CCAGGTTTCTTGGGGGAAAA+AGG | - | chr2_3:6537071-6537090 | Msa0274680:intron | 50.0% | |
| !! | GGGAAAAAGGCACTCCTCAT+TGG | - | chr2_3:6537084-6537103 | Msa0274680:intron | 50.0% |
| ! | GGTCTGTTTTCCCTCCAATG+AGG | + | chr2_3:6537101-6537120 | None:intergenic | 50.0% |
| ATTGGAGGGAAAACAGACCC+AGG | - | chr2_3:6537102-6537121 | Msa0274680:intron | 50.0% | |
| TTCCATGAGTGACCAGCACT+CGG | + | chr2_3:6537256-6537275 | None:intergenic | 50.0% | |
| CTGGTCACTCATGGAAGCAA+AGG | - | chr2_3:6537260-6537279 | Msa0274680:intron | 50.0% | |
| GGAAGCAAAGGGAGACATAC+CGG | - | chr2_3:6537272-6537291 | Msa0274680:intron | 50.0% | |
| GCAGTGGCCATACAACTGTT+AGG | - | chr2_3:6537643-6537662 | Msa0274680:intron | 50.0% | |
| GGGGAGAAGATTGCAAAAGG+AGG | - | chr2_3:6537691-6537710 | Msa0274680:intron | 50.0% | |
| GTGAAGTGGAAGCCATGTCA+AGG | + | chr2_3:6537751-6537770 | None:intergenic | 50.0% | |
| GATGCCACGTGGTTGAATCT+TGG | + | chr2_3:6537976-6537995 | None:intergenic | 50.0% | |
| TTCCATCCATCACCAAGAGC+TGG | - | chr2_3:6538198-6538217 | Msa0274680:intron | 50.0% | |
| !! | AACCAGCTCTTGGTGATGGA+TGG | + | chr2_3:6538203-6538222 | None:intergenic | 50.0% |
| ATATTACAGGCGGTGGAAGC+AGG | - | chr2_3:6538253-6538272 | Msa0274680:CDS | 50.0% | |
| ! | CCTTTTCCTTGTGCTGCACA+AGG | + | chr2_3:6539040-6539059 | None:intergenic | 50.0% |
| CCTTGTGCAGCACAAGGAAA+AGG | - | chr2_3:6539037-6539056 | Msa0274680:intron | 50.0% | |
| ! | AGTCGGTTGTCTTCTGGAAG+CGG | + | chr2_3:6539229-6539248 | None:intergenic | 50.0% |
| GGTACTAGTCGGTTGTCTTC+TGG | + | chr2_3:6539235-6539254 | None:intergenic | 50.0% | |
| CCTGGACCTTTGGTACTAGT+CGG | + | chr2_3:6539246-6539265 | None:intergenic | 50.0% | |
| ! | GAGAAGTGACCCTGATGATG+AGG | - | chr2_3:6540178-6540197 | Msa0274680:intron | 50.0% |
| ! | GAAGTGACCCTGATGATGAG+GGG | - | chr2_3:6540180-6540199 | Msa0274680:CDS | 50.0% |
| TGGAAAATCAGGCGATGTCG+TGG | - | chr2_3:6540291-6540310 | Msa0274680:intron | 50.0% | |
| CTGCTGCCTGAAGTATATGC+AGG | + | chr2_3:6540487-6540506 | None:intergenic | 50.0% | |
| CTCGTGTGCATCTGATATCC+AGG | + | chr2_3:6540533-6540552 | None:intergenic | 50.0% | |
| GGATATCAGATGCACACGAG+AGG | - | chr2_3:6540533-6540552 | Msa0274680:intron | 50.0% | |
| !! | GAGGAACAGGTTTTGGCATC+TGG | - | chr2_3:6540572-6540591 | Msa0274680:intron | 50.0% |
| !! | GGAACAGGTTTTGGCATCTG+GGG | - | chr2_3:6540574-6540593 | Msa0274680:intron | 50.0% |
| CGTGATCACTTTCTACCACG+AGG | + | chr2_3:6540631-6540650 | None:intergenic | 50.0% | |
| AACAATGGCTGACACGCTAC+AGG | - | chr2_3:6540850-6540869 | Msa0274680:intron | 50.0% | |
| CAAGCCTTACATTGTCGGAG+TGG | + | chr2_3:6540952-6540971 | None:intergenic | 50.0% | |
| TTCTTGCAGGAGAAAGAGCC+AGG | - | chr2_3:6541117-6541136 | Msa0274680:intron | 50.0% | |
| TCTTGCAGGAGAAAGAGCCA+GGG | - | chr2_3:6541118-6541137 | Msa0274680:intron | 50.0% | |
| TACCTGCAATTGGAATGCCC+TGG | + | chr2_3:6541138-6541157 | None:intergenic | 50.0% | |
| AAAATCGAGCACCTACTCCC+AGG | - | chr2_3:6541710-6541729 | Msa0274680:intron | 50.0% | |
| !! | TGGGAAGTGCATTTTGAGGG+TGG | - | chr2_3:6541839-6541858 | Msa0274680:intron | 50.0% |
| GATGGGGTTGAAGGGTCAAG+TGG | - | chr2_3:6535305-6535324 | Msa0274680:three_prime_UTR | 55.0% | |
| AGACGATGTGCAGGTGAGTG+AGG | - | chr2_3:6535900-6535919 | Msa0274680:intron | 55.0% | |
| GACGATGTGCAGGTGAGTGA+GGG | - | chr2_3:6535901-6535920 | Msa0274680:intron | 55.0% | |
| TTGACACAGAGACCGAGTGC+TGG | - | chr2_3:6537241-6537260 | Msa0274680:intron | 55.0% | |
| GCAAAGGGAGACATACCGGT+AGG | - | chr2_3:6537276-6537295 | Msa0274680:intron | 55.0% | |
| TCTTGGCAGATTGCTCGCAG+TGG | - | chr2_3:6537627-6537646 | Msa0274680:intron | 55.0% | |
| CAGCAACCAGCTCTTGGTGA+TGG | + | chr2_3:6538207-6538226 | None:intergenic | 55.0% | |
| TCACCAAGAGCTGGTTGCTG+TGG | - | chr2_3:6538207-6538226 | Msa0274680:intron | 55.0% | |
| ACACCACAGCAACCAGCTCT+TGG | + | chr2_3:6538213-6538232 | None:intergenic | 55.0% | |
| CCGACTAGTACCAAAGGTCC+AGG | - | chr2_3:6539243-6539262 | Msa0274680:CDS | 55.0% | |
| GGCTAAGCCCCTCATCATCA+GGG | + | chr2_3:6540190-6540209 | None:intergenic | 55.0% | |
| ! | AGCCAGGGCATTCCAATTGC+AGG | - | chr2_3:6541133-6541152 | Msa0274680:intron | 55.0% |
| TGAGGGTGGCGATGAAGACT+TGG | - | chr2_3:6541853-6541872 | Msa0274680:intron | 55.0% | |
| !! | GACCGAGTGCTGGTCACTCA+TGG | - | chr2_3:6537251-6537270 | Msa0274680:intron | 60.0% |
| CCTTGTGCTGCACAAGGACC+AGG | + | chr2_3:6539034-6539053 | None:intergenic | 60.0% | |
| CCTGGTCCTTGTGCAGCACA+AGG | - | chr2_3:6539031-6539050 | Msa0274680:intron | 60.0% | |
| GGGCTAAGCCCCTCATCATC+AGG | + | chr2_3:6540191-6540210 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6535171 | 6542150 | 6535171 | ID=Msa0274680;Name=Msa0274680 |
| chr2_3 | mRNA | 6535171 | 6542150 | 6535171 | ID=Msa0274680-mRNA-1;Parent=Msa0274680;Name=Msa0274680-mRNA-1;_AED=0.10;_eAED=0.10;_QI=153|0.92|1|1|1|0.92|14|397|616 |
| chr2_3 | exon | 6535171 | 6535651 | 6535171 | ID=Msa0274680-mRNA-1:exon:3100;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6536303 | 6536821 | 6536303 | ID=Msa0274680-mRNA-1:exon:3099;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6537791 | 6538126 | 6537791 | ID=Msa0274680-mRNA-1:exon:3098;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6538215 | 6538298 | 6538215 | ID=Msa0274680-mRNA-1:exon:3097;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6538678 | 6538766 | 6538678 | ID=Msa0274680-mRNA-1:exon:3096;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6539039 | 6539153 | 6539039 | ID=Msa0274680-mRNA-1:exon:3095;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6539238 | 6539364 | 6539238 | ID=Msa0274680-mRNA-1:exon:3094;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6539546 | 6539685 | 6539546 | ID=Msa0274680-mRNA-1:exon:3093;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6540028 | 6540089 | 6540028 | ID=Msa0274680-mRNA-1:exon:3092;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6540180 | 6540246 | 6540180 | ID=Msa0274680-mRNA-1:exon:3091;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6541166 | 6541270 | 6541166 | ID=Msa0274680-mRNA-1:exon:3090;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6541409 | 6541486 | 6541409 | ID=Msa0274680-mRNA-1:exon:3089;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6541867 | 6542019 | 6541867 | ID=Msa0274680-mRNA-1:exon:3088;Parent=Msa0274680-mRNA-1 |
| chr2_3 | exon | 6542106 | 6542150 | 6542106 | ID=Msa0274680-mRNA-1:exon:3087;Parent=Msa0274680-mRNA-1 |
| chr2_3 | five_prime_UTR | 6542106 | 6542150 | 6542106 | ID=Msa0274680-mRNA-1:five_prime_utr;Parent=Msa0274680-mRNA-1 |
| chr2_3 | five_prime_UTR | 6541912 | 6542019 | 6541912 | ID=Msa0274680-mRNA-1:five_prime_utr;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6541867 | 6541911 | 6541867 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6541409 | 6541486 | 6541409 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6541166 | 6541270 | 6541166 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6540180 | 6540246 | 6540180 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6540028 | 6540089 | 6540028 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6539546 | 6539685 | 6539546 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6539238 | 6539364 | 6539238 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6539039 | 6539153 | 6539039 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6538678 | 6538766 | 6538678 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6538215 | 6538298 | 6538215 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6537791 | 6538126 | 6537791 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6536303 | 6536821 | 6536303 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | CDS | 6535568 | 6535651 | 6535568 | ID=Msa0274680-mRNA-1:cds;Parent=Msa0274680-mRNA-1 |
| chr2_3 | three_prime_UTR | 6535171 | 6535567 | 6535171 | ID=Msa0274680-mRNA-1:three_prime_utr;Parent=Msa0274680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
