Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1274060 | sp|Q852L0|HD16N_ORYSJ | 73.647 | 573 | 146 | 4 | 179 | 750 | 138 | 706 | 0.0 | 903 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1274060 | G7LFZ2 | 83.179 | 755 | 59 | 6 | 1 | 751 | 1 | 691 | 0.0 | 1196 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002490 | Msa1274060 | 0.811714 | 6.098357e-51 | -8.615850e-47 |
Msa0016670 | Msa1274060 | 0.846522 | 2.060424e-59 | -8.615850e-47 |
Msa0017510 | Msa1274060 | 0.810876 | 9.268511e-51 | -8.615850e-47 |
Msa0021810 | Msa1274060 | 0.816765 | 4.670800e-52 | -8.615850e-47 |
Msa0029710 | Msa1274060 | 0.805753 | 1.146583e-49 | -8.615850e-47 |
Msa0032920 | Msa1274060 | -0.822326 | 2.514805e-53 | -8.615850e-47 |
Msa0036130 | Msa1274060 | 0.805588 | 1.241767e-49 | -8.615850e-47 |
Msa0036850 | Msa1274060 | 0.818410 | 1.989444e-52 | -8.615850e-47 |
Msa0043670 | Msa1274060 | -0.838189 | 3.334144e-57 | -8.615850e-47 |
Msa0046100 | Msa1274060 | 0.806340 | 8.628264e-50 | -8.615850e-47 |
Msa0061340 | Msa1274060 | 0.821982 | 3.022037e-53 | -8.615850e-47 |
Msa0073670 | Msa1274060 | 0.800453 | 1.431429e-48 | -8.615850e-47 |
Msa0074240 | Msa1274060 | 0.819999 | 8.648340e-53 | -8.615850e-47 |
Msa0076310 | Msa1274060 | 0.806467 | 8.112075e-50 | -8.615850e-47 |
Msa0077200 | Msa1274060 | 0.854874 | 9.202625e-62 | -8.615850e-47 |
Msa0078650 | Msa1274060 | 0.809520 | 1.817245e-50 | -8.615850e-47 |
Msa0084890 | Msa1274060 | 0.807251 | 5.536497e-50 | -8.615850e-47 |
Msa0090590 | Msa1274060 | 0.819315 | 1.238569e-52 | -8.615850e-47 |
Msa0092670 | Msa1274060 | -0.826152 | 3.173018e-54 | -8.615850e-47 |
Msa0092690 | Msa1274060 | -0.825219 | 5.281878e-54 | -8.615850e-47 |
Msa0092740 | Msa1274060 | -0.833784 | 4.369831e-56 | -8.615850e-47 |
Msa0094120 | Msa1274060 | 0.810098 | 1.364507e-50 | -8.615850e-47 |
Msa0094130 | Msa1274060 | 0.819342 | 1.221263e-52 | -8.615850e-47 |
Msa0094140 | Msa1274060 | 0.810179 | 1.310853e-50 | -8.615850e-47 |
Msa0094850 | Msa1274060 | 0.813792 | 2.139274e-51 | -8.615850e-47 |
Msa0096670 | Msa1274060 | 0.806391 | 8.414649e-50 | -8.615850e-47 |
Msa0110360 | Msa1274060 | 0.802314 | 5.949537e-49 | -8.615850e-47 |
Msa0110970 | Msa1274060 | 0.822595 | 2.178227e-53 | -8.615850e-47 |
Msa0115160 | Msa1274060 | 0.800948 | 1.133920e-48 | -8.615850e-47 |
Msa0118570 | Msa1274060 | 0.801923 | 7.159850e-49 | -8.615850e-47 |
Msa0609450 | Msa1274060 | 0.803850 | 2.863231e-49 | -8.615850e-47 |
Msa0618040 | Msa1274060 | 0.836324 | 1.000607e-56 | -8.615850e-47 |
Msa0620990 | Msa1274060 | 0.839797 | 1.277791e-57 | -8.615850e-47 |
Msa0626450 | Msa1274060 | 0.813322 | 2.714245e-51 | -8.615850e-47 |
Msa0626490 | Msa1274060 | 0.817184 | 3.762382e-52 | -8.615850e-47 |
Msa0639430 | Msa1274060 | 0.811294 | 7.522190e-51 | -8.615850e-47 |
Msa0642720 | Msa1274060 | 0.806044 | 9.955810e-50 | -8.615850e-47 |
Msa0647130 | Msa1274060 | 0.832514 | 9.049906e-56 | -8.615850e-47 |
Msa0648520 | Msa1274060 | 0.809658 | 1.696886e-50 | -8.615850e-47 |
Msa0650020 | Msa1274060 | 0.802383 | 5.758209e-49 | -8.615850e-47 |
Msa0650090 | Msa1274060 | 0.816598 | 5.092706e-52 | -8.615850e-47 |
Msa0663300 | Msa1274060 | 0.803942 | 2.739538e-49 | -8.615850e-47 |
Msa0664060 | Msa1274060 | 0.802721 | 4.904673e-49 | -8.615850e-47 |
Msa0664600 | Msa1274060 | 0.815448 | 9.197332e-52 | -8.615850e-47 |
Msa0677290 | Msa1274060 | 0.826943 | 2.055272e-54 | -8.615850e-47 |
Msa0677410 | Msa1274060 | 0.814828 | 1.262623e-51 | -8.615850e-47 |
Msa0682330 | Msa1274060 | 0.813858 | 2.068444e-51 | -8.615850e-47 |
Msa0683570 | Msa1274060 | 0.804153 | 2.475979e-49 | -8.615850e-47 |
Msa0684500 | Msa1274060 | 0.819326 | 1.231748e-52 | -8.615850e-47 |
Msa0691050 | Msa1274060 | 0.815500 | 8.957170e-52 | -8.615850e-47 |
Msa0691980 | Msa1274060 | 0.801602 | 8.333524e-49 | -8.615850e-47 |
Msa0692080 | Msa1274060 | 0.810458 | 1.141160e-50 | -8.615850e-47 |
Msa0701280 | Msa1274060 | 0.824629 | 7.276817e-54 | -8.615850e-47 |
Msa0703230 | Msa1274060 | 0.803285 | 3.750335e-49 | -8.615850e-47 |
Msa0704600 | Msa1274060 | 0.818247 | 2.165978e-52 | -8.615850e-47 |
Msa0708520 | Msa1274060 | 0.802092 | 6.611271e-49 | -8.615850e-47 |
Msa0718550 | Msa1274060 | 0.808750 | 2.656303e-50 | -8.615850e-47 |
Msa0722960 | Msa1274060 | 0.810097 | 1.365454e-50 | -8.615850e-47 |
Msa0737570 | Msa1274060 | 0.810348 | 1.205108e-50 | -8.615850e-47 |
Msa0750880 | Msa1274060 | 0.807974 | 3.888084e-50 | -8.615850e-47 |
Msa0754520 | Msa1274060 | 0.824947 | 6.123401e-54 | -8.615850e-47 |
Msa0762210 | Msa1274060 | 0.812274 | 4.604147e-51 | -8.615850e-47 |
Msa0788770 | Msa1274060 | 0.827243 | 1.741935e-54 | -8.615850e-47 |
Msa0796530 | Msa1274060 | 0.800534 | 1.377867e-48 | -8.615850e-47 |
Msa0801210 | Msa1274060 | 0.824242 | 8.977431e-54 | -8.615850e-47 |
Msa0833220 | Msa1274060 | 0.828530 | 8.540682e-55 | -8.615850e-47 |
Msa0839560 | Msa1274060 | 0.820997 | 5.102123e-53 | -8.615850e-47 |
Msa0123100 | Msa1274060 | 0.827147 | 1.836798e-54 | -8.615850e-47 |
Msa0124340 | Msa1274060 | 0.813264 | 2.795198e-51 | -8.615850e-47 |
Msa0124990 | Msa1274060 | 0.844885 | 5.728585e-59 | -8.615850e-47 |
Msa0126370 | Msa1274060 | 0.800934 | 1.141667e-48 | -8.615850e-47 |
Msa0134180 | Msa1274060 | 0.813562 | 2.403735e-51 | -8.615850e-47 |
Msa0137610 | Msa1274060 | -0.836685 | 8.095951e-57 | -8.615850e-47 |
Msa0144360 | Msa1274060 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
Msa0146260 | Msa1274060 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
Msa0152400 | Msa1274060 | 0.827114 | 1.870248e-54 | -8.615850e-47 |
Msa0157290 | Msa1274060 | 0.811204 | 7.869619e-51 | -8.615850e-47 |
Msa0173890 | Msa1274060 | 0.812438 | 4.239493e-51 | -8.615850e-47 |
Msa0182620 | Msa1274060 | -0.822954 | 1.796286e-53 | -8.615850e-47 |
Msa0183830 | Msa1274060 | 0.827114 | 1.870629e-54 | -8.615850e-47 |
Msa0186890 | Msa1274060 | 0.803562 | 3.286003e-49 | -8.615850e-47 |
Msa0193890 | Msa1274060 | 0.800749 | 1.245494e-48 | -8.615850e-47 |
Msa0197420 | Msa1274060 | 0.822528 | 2.256839e-53 | -8.615850e-47 |
Msa0197890 | Msa1274060 | 0.801369 | 9.303502e-49 | -8.615850e-47 |
Msa0197930 | Msa1274060 | 0.812125 | 4.962984e-51 | -8.615850e-47 |
Msa0222920 | Msa1274060 | 0.805375 | 1.376187e-49 | -8.615850e-47 |
Msa0225460 | Msa1274060 | 0.805605 | 1.231238e-49 | -8.615850e-47 |
Msa0225680 | Msa1274060 | 0.813280 | 2.771898e-51 | -8.615850e-47 |
Msa0225740 | Msa1274060 | 0.811924 | 5.487059e-51 | -8.615850e-47 |
Msa0225750 | Msa1274060 | 0.825223 | 5.271024e-54 | -8.615850e-47 |
Msa0225760 | Msa1274060 | 0.811292 | 7.532662e-51 | -8.615850e-47 |
Msa0237080 | Msa1274060 | 0.816729 | 4.758239e-52 | -8.615850e-47 |
Msa1228890 | Msa1274060 | 0.800147 | 1.651914e-48 | -8.615850e-47 |
Msa1231550 | Msa1274060 | 0.879520 | 1.165057e-69 | -8.615850e-47 |
Msa1231930 | Msa1274060 | 0.803305 | 3.715114e-49 | -8.615850e-47 |
Msa1232710 | Msa1274060 | 0.838025 | 3.673874e-57 | -8.615850e-47 |
Msa1236100 | Msa1274060 | 0.820345 | 7.205225e-53 | -8.615850e-47 |
Msa1243040 | Msa1274060 | 0.801249 | 9.841427e-49 | -8.615850e-47 |
Msa1252190 | Msa1274060 | 0.878144 | 3.560491e-69 | -8.615850e-47 |
Msa1254610 | Msa1274060 | 0.812853 | 3.440207e-51 | -8.615850e-47 |
Msa1274060 | Msa1274280 | 0.953381 | 3.107353e-111 | -8.615850e-47 |
Msa1274060 | Msa1276660 | 0.822821 | 1.929648e-53 | -8.615850e-47 |
Msa1274060 | Msa1283990 | 0.830311 | 3.154714e-55 | -8.615850e-47 |
Msa1274060 | Msa1292830 | 0.859465 | 4.059172e-63 | -8.615850e-47 |
Msa1274060 | Msa1303250 | 0.813349 | 2.677583e-51 | -8.615850e-47 |
Msa1274060 | Msa1307570 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
Msa1274060 | Msa1311960 | 0.800072 | 1.711140e-48 | -8.615850e-47 |
Msa1274060 | Msa1313300 | 0.839322 | 1.698423e-57 | -8.615850e-47 |
Msa1274060 | Msa1328710 | 0.812988 | 3.212822e-51 | -8.615850e-47 |
Msa1274060 | Msa1331590 | 0.857736 | 1.332248e-62 | -8.615850e-47 |
Msa1274060 | Msa1332000 | 0.800428 | 1.448178e-48 | -8.615850e-47 |
Msa1274060 | Msa1333560 | 0.801764 | 7.718194e-49 | -8.615850e-47 |
Msa1274060 | Msa1336110 | 0.817508 | 3.179233e-52 | -8.615850e-47 |
Msa1274060 | Msa1340510 | 0.822399 | 2.418812e-53 | -8.615850e-47 |
Msa1274060 | Msa1343070 | 0.808482 | 3.030977e-50 | -8.615850e-47 |
Msa1274060 | Msa1346370 | 0.814533 | 1.468190e-51 | -8.615850e-47 |
Msa1274060 | Msa1348090 | 0.800099 | 1.689349e-48 | -8.615850e-47 |
Msa1274060 | Msa1353060 | 0.810806 | 9.599281e-51 | -8.615850e-47 |
Msa1274060 | Msa1364470 | -0.804001 | 2.663808e-49 | -8.615850e-47 |
Msa1274060 | Msa1366600 | 0.804899 | 1.730851e-49 | -8.615850e-47 |
Msa1274060 | Msa1369150 | 0.850329 | 1.822370e-60 | -8.615850e-47 |
Msa1274060 | Msa1373330 | 0.839994 | 1.135885e-57 | -8.615850e-47 |
Msa1274060 | Msa1374040 | 0.806173 | 9.352851e-50 | -8.615850e-47 |
Msa1274060 | Msa1406040 | 0.841685 | 4.091184e-58 | -8.615850e-47 |
Msa1274060 | Msa1409870 | 0.805700 | 1.176210e-49 | -8.615850e-47 |
Msa1274060 | Msa1427060 | 0.838433 | 2.884105e-57 | -8.615850e-47 |
Msa1274060 | Msa1429680 | 0.800272 | 1.558190e-48 | -8.615850e-47 |
Msa1274060 | Msa1432950 | 0.814192 | 1.746434e-51 | -8.615850e-47 |
Msa1274060 | Msa1440260 | -0.838917 | 2.162981e-57 | -8.615850e-47 |
Msa1274060 | Msa1440960 | 0.802574 | 5.259830e-49 | -8.615850e-47 |
Msa1274060 | Msa1443300 | 0.802940 | 4.418906e-49 | -8.615850e-47 |
Msa1274060 | Msa1445190 | 0.805677 | 1.189168e-49 | -8.615850e-47 |
Msa1274060 | Msa1447240 | 0.802705 | 4.942723e-49 | -8.615850e-47 |
Msa1274060 | Msa1459180 | 0.827827 | 1.261652e-54 | -8.615850e-47 |
Msa1274060 | Msa1459380 | 0.854850 | 9.353354e-62 | -8.615850e-47 |
Msa1274060 | Msa1460020 | 0.829323 | 5.488152e-55 | -8.615850e-47 |
Msa1274060 | Msa1461300 | 0.809300 | 2.025172e-50 | -8.615850e-47 |
Msa0369850 | Msa1274060 | 0.801695 | 7.976228e-49 | -8.615850e-47 |
Msa0410500 | Msa1274060 | 0.835987 | 1.218167e-56 | -8.615850e-47 |
Msa0410650 | Msa1274060 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
Msa0413450 | Msa1274060 | 0.804152 | 2.477613e-49 | -8.615850e-47 |
Msa0416590 | Msa1274060 | 0.819919 | 9.020155e-53 | -8.615850e-47 |
Msa0417880 | Msa1274060 | 0.843588 | 1.277643e-58 | -8.615850e-47 |
Msa0419820 | Msa1274060 | 0.804593 | 2.005608e-49 | -8.615850e-47 |
Msa0422850 | Msa1274060 | 0.851266 | 9.928052e-61 | -8.615850e-47 |
Msa0422930 | Msa1274060 | 0.849865 | 2.457189e-60 | -8.615850e-47 |
Msa0423900 | Msa1274060 | 0.820033 | 8.494513e-53 | -8.615850e-47 |
Msa0441130 | Msa1274060 | 0.802258 | 6.110846e-49 | -8.615850e-47 |
Msa0447370 | Msa1274060 | 0.800497 | 1.401983e-48 | -8.615850e-47 |
Msa0475790 | Msa1274060 | 0.825774 | 3.901980e-54 | -8.615850e-47 |
Msa0986920 | Msa1274060 | 0.818936 | 1.511353e-52 | -8.615850e-47 |
Msa1012810 | Msa1274060 | 0.804415 | 2.183793e-49 | -8.615850e-47 |
Msa1037920 | Msa1274060 | 0.818276 | 2.133334e-52 | -8.615850e-47 |
Msa1045140 | Msa1274060 | 0.808006 | 3.827936e-50 | -8.615850e-47 |
Msa1047870 | Msa1274060 | 0.803614 | 3.204453e-49 | -8.615850e-47 |
Msa1059960 | Msa1274060 | 0.811138 | 8.132507e-51 | -8.615850e-47 |
Msa1063950 | Msa1274060 | 0.814587 | 1.428353e-51 | -8.615850e-47 |
Msa1066490 | Msa1274060 | 0.804163 | 2.464865e-49 | -8.615850e-47 |
Msa1079230 | Msa1274060 | 0.803512 | 3.365370e-49 | -8.615850e-47 |
Msa1082700 | Msa1274060 | 0.807240 | 5.567198e-50 | -8.615850e-47 |
Msa1091520 | Msa1274060 | 0.806202 | 9.224354e-50 | -8.615850e-47 |
Msa1097640 | Msa1274060 | 0.835542 | 1.579764e-56 | -8.615850e-47 |
Msa1102770 | Msa1274060 | 0.810405 | 1.171766e-50 | -8.615850e-47 |
Msa0239190 | Msa1274060 | 0.820680 | 6.036178e-53 | -8.615850e-47 |
Msa0241640 | Msa1274060 | 0.802860 | 4.592041e-49 | -8.615850e-47 |
Msa0241800 | Msa1274060 | 0.817660 | 2.939419e-52 | -8.615850e-47 |
Msa0248970 | Msa1274060 | 0.807341 | 5.299105e-50 | -8.615850e-47 |
Msa0255090 | Msa1274060 | 0.806908 | 6.545725e-50 | -8.615850e-47 |
Msa0259380 | Msa1274060 | 0.807823 | 4.188160e-50 | -8.615850e-47 |
Msa0274680 | Msa1274060 | 0.832757 | 7.878842e-56 | -8.615850e-47 |
Msa0277180 | Msa1274060 | 0.808414 | 3.133301e-50 | -8.615850e-47 |
Msa0283450 | Msa1274060 | 0.806561 | 7.748104e-50 | -8.615850e-47 |
Msa0283520 | Msa1274060 | 0.804772 | 1.840078e-49 | -8.615850e-47 |
Msa0292400 | Msa1274060 | 0.830320 | 3.138273e-55 | -8.615850e-47 |
Msa0300690 | Msa1274060 | 0.829457 | 5.093082e-55 | -8.615850e-47 |
Msa0307850 | Msa1274060 | 0.816307 | 5.916272e-52 | -8.615850e-47 |
Msa0314210 | Msa1274060 | 0.807818 | 4.197115e-50 | -8.615850e-47 |
Msa0316810 | Msa1274060 | 0.821877 | 3.195945e-53 | -8.615850e-47 |
Msa0316910 | Msa1274060 | 0.807926 | 3.980553e-50 | -8.615850e-47 |
Msa0317310 | Msa1274060 | 0.811674 | 6.221421e-51 | -8.615850e-47 |
Msa0317730 | Msa1274060 | 0.805229 | 1.476667e-49 | -8.615850e-47 |
Msa0332000 | Msa1274060 | 0.801785 | 7.644697e-49 | -8.615850e-47 |
Msa0332920 | Msa1274060 | 0.816121 | 6.511313e-52 | -8.615850e-47 |
Msa0334040 | Msa1274060 | 0.830546 | 2.763626e-55 | -8.615850e-47 |
Msa0341330 | Msa1274060 | 0.809496 | 1.838640e-50 | -8.615850e-47 |
Msa0345330 | Msa1274060 | 0.814043 | 1.883580e-51 | -8.615850e-47 |
Msa0345410 | Msa1274060 | 0.808689 | 2.736922e-50 | -8.615850e-47 |
Msa1108160 | Msa1274060 | 0.802323 | 5.924041e-49 | -8.615850e-47 |
Msa1111110 | Msa1274060 | 0.801471 | 8.866768e-49 | -8.615850e-47 |
Msa1113340 | Msa1274060 | 0.803483 | 3.411662e-49 | -8.615850e-47 |
Msa1124110 | Msa1274060 | 0.822203 | 2.686324e-53 | -8.615850e-47 |
Msa1124310 | Msa1274060 | 0.804651 | 1.950173e-49 | -8.615850e-47 |
Msa1127890 | Msa1274060 | 0.808092 | 3.670843e-50 | -8.615850e-47 |
Msa1129980 | Msa1274060 | 0.817429 | 3.313403e-52 | -8.615850e-47 |
Msa1135270 | Msa1274060 | 0.807853 | 4.125368e-50 | -8.615850e-47 |
Msa1139810 | Msa1274060 | 0.832177 | 1.096913e-55 | -8.615850e-47 |
Msa1140690 | Msa1274060 | 0.812385 | 4.353763e-51 | -8.615850e-47 |
Msa1143650 | Msa1274060 | 0.833243 | 5.964994e-56 | -8.615850e-47 |
Msa1157870 | Msa1274060 | 0.829326 | 5.479275e-55 | -8.615850e-47 |
Msa1168950 | Msa1274060 | 0.816312 | 5.902126e-52 | -8.615850e-47 |
Msa1169040 | Msa1274060 | 0.820881 | 5.424994e-53 | -8.615850e-47 |
Msa1173330 | Msa1274060 | 0.807365 | 5.238539e-50 | -8.615850e-47 |
Msa1174100 | Msa1274060 | 0.810851 | 9.384052e-51 | -8.615850e-47 |
Msa1179940 | Msa1274060 | 0.819886 | 9.175229e-53 | -8.615850e-47 |
Msa1179970 | Msa1274060 | 0.819510 | 1.118455e-52 | -8.615850e-47 |
Msa1199570 | Msa1274060 | 0.809326 | 2.000034e-50 | -8.615850e-47 |
Msa1200370 | Msa1274060 | 0.818572 | 1.827997e-52 | -8.615850e-47 |
Msa1201650 | Msa1274060 | 0.831872 | 1.304806e-55 | -8.615850e-47 |
Msa1202190 | Msa1274060 | 0.802957 | 4.383493e-49 | -8.615850e-47 |
Msa1203710 | Msa1274060 | 0.824119 | 9.590631e-54 | -8.615850e-47 |
Msa0485990 | Msa1274060 | 0.818257 | 2.154100e-52 | -8.615850e-47 |
Msa0507680 | Msa1274060 | 0.809199 | 2.129660e-50 | -8.615850e-47 |
Msa0509610 | Msa1274060 | 0.820575 | 6.379129e-53 | -8.615850e-47 |
Msa0513160 | Msa1274060 | 0.803774 | 2.969573e-49 | -8.615850e-47 |
Msa0521880 | Msa1274060 | 0.821482 | 3.944715e-53 | -8.615850e-47 |
Msa0526890 | Msa1274060 | 0.805161 | 1.525882e-49 | -8.615850e-47 |
Msa0527860 | Msa1274060 | 0.811321 | 7.421978e-51 | -8.615850e-47 |
Msa0541860 | Msa1274060 | 0.801837 | 7.456175e-49 | -8.615850e-47 |
Msa0544830 | Msa1274060 | 0.819139 | 1.358272e-52 | -8.615850e-47 |
Msa0546680 | Msa1274060 | 0.824737 | 6.865311e-54 | -8.615850e-47 |
Msa0555910 | Msa1274060 | 0.803127 | 4.043999e-49 | -8.615850e-47 |
Msa0557070 | Msa1274060 | 0.810172 | 1.315389e-50 | -8.615850e-47 |
Msa0569200 | Msa1274060 | 0.841723 | 3.997145e-58 | -8.615850e-47 |
Msa0573380 | Msa1274060 | 0.803052 | 4.189664e-49 | -8.615850e-47 |
Msa0574890 | Msa1274060 | 0.831875 | 1.302778e-55 | -8.615850e-47 |
Msa0576690 | Msa1274060 | 0.836793 | 7.597105e-57 | -8.615850e-47 |
Msa0582450 | Msa1274060 | 0.824230 | 9.034262e-54 | -8.615850e-47 |
Msa0586190 | Msa1274060 | 0.826324 | 2.887375e-54 | -8.615850e-47 |
Msa0587940 | Msa1274060 | 0.814502 | 1.491289e-51 | -8.615850e-47 |
Msa0846140 | Msa1274060 | 0.833713 | 4.554149e-56 | -8.615850e-47 |
Msa0850960 | Msa1274060 | 0.828233 | 1.007478e-54 | -8.615850e-47 |
Msa0856050 | Msa1274060 | 0.810667 | 1.028443e-50 | -8.615850e-47 |
Msa0856920 | Msa1274060 | 0.814298 | 1.654310e-51 | -8.615850e-47 |
Msa0861510 | Msa1274060 | 0.820069 | 8.333703e-53 | -8.615850e-47 |
Msa0861530 | Msa1274060 | 0.812677 | 3.759233e-51 | -8.615850e-47 |
Msa0861600 | Msa1274060 | 0.821049 | 4.964328e-53 | -8.615850e-47 |
Msa0880140 | Msa1274060 | 0.806430 | 8.259133e-50 | -8.615850e-47 |
Msa0881020 | Msa1274060 | 0.809905 | 1.501634e-50 | -8.615850e-47 |
Msa0896970 | Msa1274060 | 0.802259 | 6.107081e-49 | -8.615850e-47 |
Msa0908050 | Msa1274060 | 0.805191 | 1.503563e-49 | -8.615850e-47 |
Msa0930780 | Msa1274060 | 0.852253 | 5.211216e-61 | -8.615850e-47 |
Msa0937670 | Msa1274060 | 0.800189 | 1.619301e-48 | -8.615850e-47 |
Msa0968670 | Msa1274060 | 0.815744 | 7.904117e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1274060 | MtrunA17_Chr8g0340491 | 83.179 | 755 | 59 | 6 | 1 | 751 | 1 | 691 | 0.0 | 1196 |
Msa1274060 | MtrunA17_Chr3g0140431 | 80.416 | 577 | 102 | 3 | 179 | 751 | 29 | 598 | 0.0 | 988 |
Msa1274060 | MtrunA17_Chr1g0146301 | 77.816 | 577 | 117 | 3 | 179 | 751 | 115 | 684 | 0.0 | 967 |
Msa1274060 | MtrunA17_Chr7g0214531 | 74.390 | 574 | 142 | 4 | 179 | 750 | 28 | 598 | 0.0 | 930 |
Msa1274060 | MtrunA17_Chr7g0253211 | 72.426 | 573 | 154 | 3 | 179 | 750 | 315 | 884 | 0.0 | 900 |
Msa1274060 | MtrunA17_Chr1g0213321 | 70.855 | 573 | 159 | 3 | 179 | 750 | 110 | 675 | 0.0 | 892 |
Msa1274060 | MtrunA17_Chr4g0071031 | 36.749 | 283 | 155 | 7 | 188 | 464 | 9 | 273 | 1.41e-52 | 189 |
Msa1274060 | MtrunA17_Chr1g0166821 | 37.456 | 283 | 153 | 6 | 188 | 464 | 10 | 274 | 2.02e-52 | 189 |
Msa1274060 | MtrunA17_Chr2g0299661 | 36.786 | 280 | 159 | 6 | 188 | 464 | 9 | 273 | 2.87e-52 | 188 |
Msa1274060 | MtrunA17_Chr2g0329981 | 36.396 | 283 | 156 | 7 | 188 | 464 | 9 | 273 | 2.88e-52 | 189 |
Msa1274060 | MtrunA17_Chr1g0183631 | 37.143 | 280 | 158 | 6 | 188 | 464 | 9 | 273 | 4.77e-51 | 184 |
Msa1274060 | MtrunA17_Chr7g0261501 | 37.143 | 280 | 158 | 6 | 188 | 464 | 9 | 273 | 9.03e-51 | 184 |
Msa1274060 | MtrunA17_Chr1g0187571 | 36.749 | 283 | 155 | 6 | 188 | 464 | 10 | 274 | 1.74e-50 | 183 |
Msa1274060 | MtrunA17_Chr8g0342821 | 36.462 | 277 | 151 | 8 | 188 | 458 | 9 | 266 | 2.25e-50 | 183 |
Msa1274060 | MtrunA17_Chr8g0390211 | 35.640 | 289 | 160 | 7 | 182 | 464 | 5 | 273 | 7.62e-50 | 181 |
Msa1274060 | MtrunA17_Chr6g0486611 | 35.106 | 282 | 161 | 6 | 188 | 464 | 9 | 273 | 1.42e-49 | 180 |
Msa1274060 | MtrunA17_Chr1g0146151 | 34.276 | 283 | 162 | 6 | 188 | 464 | 9 | 273 | 7.86e-48 | 175 |
Msa1274060 | MtrunA17_Chr1g0167261 | 36.140 | 285 | 156 | 7 | 188 | 464 | 10 | 276 | 4.01e-47 | 171 |
Msa1274060 | MtrunA17_Chr3g0140071 | 33.922 | 283 | 163 | 7 | 188 | 464 | 9 | 273 | 1.31e-44 | 166 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1274060 | AT2G25760.1 | 77.604 | 576 | 126 | 1 | 179 | 751 | 98 | 673 | 0.0 | 987 |
Msa1274060 | AT2G25760.2 | 76.857 | 579 | 128 | 2 | 179 | 751 | 98 | 676 | 0.0 | 978 |
Msa1274060 | AT3G13670.1 | 72.491 | 578 | 152 | 4 | 179 | 751 | 128 | 703 | 0.0 | 911 |
Msa1274060 | AT5G18190.2 | 72.251 | 573 | 155 | 3 | 179 | 750 | 121 | 690 | 0.0 | 899 |
Msa1274060 | AT5G18190.1 | 72.251 | 573 | 155 | 3 | 179 | 750 | 121 | 690 | 0.0 | 899 |
Msa1274060 | AT3G03940.1 | 71.728 | 573 | 158 | 3 | 179 | 750 | 131 | 700 | 0.0 | 899 |
Msa1274060 | AT3G03930.1 | 63.846 | 260 | 90 | 2 | 492 | 750 | 31 | 287 | 1.24e-116 | 353 |
Msa1274060 | AT3G23340.1 | 37.456 | 283 | 153 | 6 | 188 | 464 | 9 | 273 | 7.06e-53 | 190 |
Msa1274060 | AT1G03930.1 | 36.749 | 283 | 155 | 7 | 188 | 464 | 9 | 273 | 1.34e-52 | 190 |
Msa1274060 | AT5G44100.1 | 36.071 | 280 | 161 | 5 | 188 | 464 | 9 | 273 | 2.73e-52 | 189 |
Msa1274060 | AT5G44100.2 | 36.071 | 280 | 161 | 5 | 188 | 464 | 9 | 273 | 2.73e-52 | 189 |
Msa1274060 | AT4G26100.1 | 36.749 | 283 | 155 | 7 | 188 | 464 | 9 | 273 | 7.95e-52 | 187 |
Msa1274060 | AT4G28540.1 | 36.749 | 283 | 155 | 7 | 188 | 464 | 13 | 277 | 1.92e-51 | 187 |
Msa1274060 | AT2G19470.1 | 36.786 | 280 | 159 | 6 | 188 | 464 | 9 | 273 | 2.11e-51 | 186 |
Msa1274060 | AT5G57015.1 | 36.396 | 283 | 156 | 7 | 188 | 464 | 9 | 273 | 9.89e-51 | 184 |
Msa1274060 | AT4G14340.2 | 36.786 | 280 | 159 | 5 | 188 | 464 | 15 | 279 | 9.98e-51 | 181 |
Msa1274060 | AT4G28860.2 | 35.357 | 280 | 163 | 5 | 188 | 464 | 9 | 273 | 1.53e-50 | 181 |
Msa1274060 | AT5G43320.1 | 36.749 | 283 | 155 | 6 | 188 | 464 | 9 | 273 | 1.59e-50 | 184 |
Msa1274060 | AT4G14340.1 | 37.500 | 280 | 157 | 6 | 188 | 464 | 15 | 279 | 1.87e-50 | 183 |
Msa1274060 | AT4G28860.1 | 35.336 | 283 | 159 | 6 | 188 | 464 | 9 | 273 | 4.02e-50 | 181 |
Msa1274060 | AT5G43320.2 | 36.786 | 280 | 159 | 5 | 188 | 464 | 9 | 273 | 4.94e-50 | 180 |
Msa1274060 | AT5G43320.3 | 36.786 | 280 | 159 | 5 | 188 | 464 | 9 | 273 | 4.94e-50 | 180 |
Msa1274060 | AT4G28880.3 | 35.689 | 283 | 158 | 6 | 188 | 464 | 9 | 273 | 5.60e-50 | 181 |
Msa1274060 | AT4G28880.2 | 35.689 | 283 | 158 | 6 | 188 | 464 | 9 | 273 | 5.60e-50 | 181 |
Msa1274060 | AT4G28880.1 | 35.689 | 283 | 158 | 6 | 188 | 464 | 9 | 273 | 5.60e-50 | 181 |
Msa1274060 | AT4G28880.4 | 35.689 | 283 | 158 | 6 | 188 | 464 | 9 | 273 | 5.60e-50 | 181 |
Msa1274060 | AT1G72710.1 | 36.042 | 283 | 156 | 8 | 188 | 464 | 9 | 272 | 1.95e-49 | 181 |
Msa1274060 | AT1G04440.1 | 35.689 | 283 | 158 | 6 | 188 | 464 | 9 | 273 | 2.10e-49 | 181 |
Msa1274060 | AT3G23340.2 | 38.372 | 258 | 142 | 6 | 213 | 464 | 13 | 259 | 4.09e-48 | 176 |
Msa1274060 | AT4G08800.1 | 32.500 | 280 | 139 | 7 | 188 | 464 | 9 | 241 | 3.95e-38 | 144 |
Find 222 sgRNAs with CRISPR-Local
Find 517 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGCTCTTCATCATACTTTA+AGG | 0.148328 | 8_3:-7863519 | None:intergenic |
TGTTCAACAAACTCTTTAAA+AGG | 0.193642 | 8_3:-7863488 | None:intergenic |
TGTATGATTGCTGCGCATAC+TGG | 0.265771 | 8_3:-7864798 | None:intergenic |
AAACTTGGCAAGGGTGGATT+TGG | 0.288608 | 8_3:+7861767 | Msa1274060:CDS |
GTATTCAGTGGCCTAATGTC+TGG | 0.288661 | 8_3:-7863590 | None:intergenic |
TGGAAGCAGGAGGGATGATT+TGG | 0.289324 | 8_3:+7863251 | Msa1274060:CDS |
AGTGTATACCTTTGTTTCAT+TGG | 0.302446 | 8_3:-7863844 | None:intergenic |
GCAAGTGTGCATTCACATTT+GGG | 0.302471 | 8_3:+7863222 | Msa1274060:CDS |
TCTCTCTTTGATGGGATTGT+TGG | 0.307967 | 8_3:+7863560 | Msa1274060:CDS |
TGCAAGTGTGCATTCACATT+TGG | 0.309144 | 8_3:+7863221 | Msa1274060:CDS |
CATATTCCCAATCACGAATA+TGG | 0.322102 | 8_3:-7860788 | None:intergenic |
TGGCCACAGCAGGGCCCAAA+TGG | 0.322638 | 8_3:+7864890 | Msa1274060:CDS |
GCTAATTCCGGGACCAATAA+TGG | 0.326639 | 8_3:+7860765 | Msa1274060:CDS |
GCTCTAACTGGAGCTAATTC+CGG | 0.328330 | 8_3:+7860753 | Msa1274060:CDS |
ATCACGAATATGGCCATTAT+TGG | 0.329863 | 8_3:-7860778 | None:intergenic |
TACTATATCACTGCAGTTGC+AGG | 0.331120 | 8_3:+7864645 | Msa1274060:CDS |
AACAAACTCTTTAAAAGGCT+TGG | 0.332669 | 8_3:-7863483 | None:intergenic |
AAATACATTTCTCTCTTTGA+TGG | 0.338871 | 8_3:+7863551 | Msa1274060:CDS |
GCGTGCAGCTGCGGCGGCGG+CGG | 0.340408 | 8_3:+7859915 | Msa1274060:CDS |
CGCGCTCCACTACGCATTAC+CGG | 0.342109 | 8_3:-7859793 | None:intergenic |
GGGCCTGTGGGCCTTAATAA+TGG | 0.345557 | 8_3:+7864375 | Msa1274060:CDS |
CACATCGACTGCTGCAACTT+GGG | 0.347827 | 8_3:+7865115 | Msa1274060:CDS |
AGACATAACTACTCCCCATT+TGG | 0.350639 | 8_3:-7864905 | None:intergenic |
TGTCCCTGCATCCATTATTA+AGG | 0.355727 | 8_3:-7864386 | None:intergenic |
GGAAGCGGGTGGAGCGGAGA+AGG | 0.358815 | 8_3:+7860005 | Msa1274060:CDS |
CTCTAACTGGAGCTAATTCC+GGG | 0.359400 | 8_3:+7860754 | Msa1274060:CDS |
GCGGCGTGCAGCTGCGGCGG+CGG | 0.360716 | 8_3:+7859912 | Msa1274060:CDS |
ACAAAGGATATCAGGTTTGC+AGG | 0.362919 | 8_3:+7863417 | Msa1274060:CDS |
AATCGATACCTGAAAATATC+AGG | 0.364931 | 8_3:-7863066 | None:intergenic |
GTGCAGATTATGGATATTCT+AGG | 0.366603 | 8_3:+7862367 | Msa1274060:intron |
CATTCACATTTGGGGAGAAA+TGG | 0.369347 | 8_3:+7863231 | Msa1274060:CDS |
TTCTCCGAGGTCGTCTTCCT+TGG | 0.374259 | 8_3:+7863301 | Msa1274060:CDS |
AAATTGTTCCTGGTAGATCT+TGG | 0.375545 | 8_3:+7862884 | Msa1274060:CDS |
TTGGTCCAAACCCAGACATT+AGG | 0.375997 | 8_3:+7863579 | Msa1274060:CDS |
CATTGAAGCAATATCCATAT+TGG | 0.378020 | 8_3:+7862563 | Msa1274060:CDS |
AGTGGCCTAATGTCTGGGTT+TGG | 0.378824 | 8_3:-7863584 | None:intergenic |
AGAGTGCATCTTCTCCAATA+TGG | 0.379754 | 8_3:-7862577 | None:intergenic |
TCGTACGCTTTCCACTCTTC+TGG | 0.382554 | 8_3:-7862021 | None:intergenic |
GTGATTCATTTCCTTTCAAA+TGG | 0.385845 | 8_3:+7864827 | Msa1274060:CDS |
TAGCAGTGTTGCTTCATCTC+AGG | 0.389104 | 8_3:+7864354 | Msa1274060:CDS |
GACATAACTACTCCCCATTT+GGG | 0.392485 | 8_3:-7864904 | None:intergenic |
AACTGGACCTGAAGCTTTAG+AGG | 0.393575 | 8_3:+7861838 | Msa1274060:CDS |
ACGGCGGCGTGCAGCTGCGG+CGG | 0.397327 | 8_3:+7859909 | Msa1274060:CDS |
ACAAACTCTTTAAAAGGCTT+GGG | 0.399318 | 8_3:-7863482 | None:intergenic |
GGGAGAAAACAAAGGATATC+AGG | 0.402180 | 8_3:+7863409 | Msa1274060:intron |
TTCCTGGTAGATCTTGGATT+GGG | 0.405911 | 8_3:+7862890 | Msa1274060:CDS |
CAGTCTGTTAAAGCTCTAAC+TGG | 0.408108 | 8_3:+7860741 | Msa1274060:CDS |
CAATATGGATATTGCTTCAA+TGG | 0.411978 | 8_3:-7862562 | None:intergenic |
TGCTTCATCTCAGGGCCTGT+GGG | 0.413274 | 8_3:+7864363 | Msa1274060:CDS |
TGGCTTTGTTATTCCTGAAA+AGG | 0.414541 | 8_3:+7860113 | Msa1274060:CDS |
TGTCAAGAAGTTTGATGGGC+TGG | 0.422003 | 8_3:+7865501 | Msa1274060:three_prime_UTR |
GGAGGAGGAAGCGGGTGGAG+CGG | 0.425256 | 8_3:+7859999 | Msa1274060:CDS |
ATTCACAAGCGGTGGGAGTC+TGG | 0.427074 | 8_3:+7865083 | Msa1274060:CDS |
GCACATACCTCTAAAGCTTC+AGG | 0.429295 | 8_3:-7861845 | None:intergenic |
AGTTTGATGGGCTGGGAGAC+AGG | 0.432641 | 8_3:+7865509 | Msa1274060:three_prime_UTR |
TTACTCGCCGAATGTCATTT+CGG | 0.433426 | 8_3:-7860899 | None:intergenic |
GGCCACAGCAGGGCCCAAAT+GGG | 0.439996 | 8_3:+7864891 | Msa1274060:CDS |
GCAGTTGCAGGAATTGCAAA+TGG | 0.440109 | 8_3:+7864657 | Msa1274060:CDS |
ACCTGAAAATATCAGGCCTT+TGG | 0.441501 | 8_3:-7863059 | None:intergenic |
TCGTCCTGCAGCTTATTCTC+TGG | 0.442854 | 8_3:-7865164 | None:intergenic |
TGCGGCGGCGGCGGTTGAAG+AGG | 0.445807 | 8_3:+7859924 | Msa1274060:CDS |
TTCCAGTATGTCCACTGAAA+TGG | 0.446920 | 8_3:+7862527 | Msa1274060:intron |
AGCAGTGTTGCTTCATCTCA+GGG | 0.451254 | 8_3:+7864355 | Msa1274060:CDS |
TAGCATGTCAAGAAGTTTGA+TGG | 0.452027 | 8_3:+7865496 | Msa1274060:three_prime_UTR |
CAGTTAGAGCTTTAACAGAC+TGG | 0.454744 | 8_3:-7860740 | None:intergenic |
ATAATGGCCATATTCGTGAT+TGG | 0.455402 | 8_3:+7860781 | Msa1274060:CDS |
TTCTGTGACTGTCGCTTCGT+TGG | 0.455728 | 8_3:-7859826 | None:intergenic |
AATACATTTCTCTCTTTGAT+GGG | 0.456247 | 8_3:+7863552 | Msa1274060:CDS |
TTGCTTCATCTCAGGGCCTG+TGG | 0.457116 | 8_3:+7864362 | Msa1274060:CDS |
GGGGAGTAGTTATGTCTAAA+GGG | 0.458523 | 8_3:+7864911 | Msa1274060:CDS |
TCACATCGACTGCTGCAACT+TGG | 0.459764 | 8_3:+7865114 | Msa1274060:CDS |
CCTTCAGCCCCTCCATGGAT+TGG | 0.461926 | 8_3:-7865381 | None:intergenic |
TAATGGCCATATTCGTGATT+GGG | 0.463174 | 8_3:+7860782 | Msa1274060:CDS |
TCCCCATTTGGGCCCTGCTG+TGG | 0.465176 | 8_3:-7864893 | None:intergenic |
AAGACGGCGGCGTGCAGCTG+CGG | 0.469475 | 8_3:+7859906 | Msa1274060:CDS |
GATTGGGAATATGACTTATC+CGG | 0.469753 | 8_3:+7860798 | Msa1274060:CDS |
TGGGGAGTAGTTATGTCTAA+AGG | 0.471149 | 8_3:+7864910 | Msa1274060:CDS |
AGCGGAGAAGGAAGTGATAG+AGG | 0.472959 | 8_3:+7860017 | Msa1274060:CDS |
GTCAAGAAGTTTGATGGGCT+GGG | 0.474341 | 8_3:+7865502 | Msa1274060:three_prime_UTR |
CTGAGATTAAAGAACACTAA+TGG | 0.475677 | 8_3:-7860837 | None:intergenic |
GAATACAGAAGGTGCACAAA+AGG | 0.476772 | 8_3:+7863607 | Msa1274060:CDS |
AGAGGAGAAGGAGGAGGAAG+CGG | 0.478493 | 8_3:+7859990 | Msa1274060:CDS |
GTAACTTCAATGGCCACAGC+AGG | 0.478584 | 8_3:+7864880 | Msa1274060:CDS |
ACACTAATCCATTGGTTCGC+TGG | 0.480962 | 8_3:-7863805 | None:intergenic |
TTAATAATGGATGCAGGGAC+AGG | 0.483674 | 8_3:+7864388 | Msa1274060:CDS |
TATTCAGTGGCCTAATGTCT+GGG | 0.488062 | 8_3:-7863589 | None:intergenic |
TTGAAAACCGAAATGACATT+CGG | 0.488270 | 8_3:+7860892 | Msa1274060:CDS |
GAGGAGAAGGAGGAGGAAGC+GGG | 0.488565 | 8_3:+7859991 | Msa1274060:CDS |
GTAGTTATGTCTAAAGGGAC+AGG | 0.492338 | 8_3:+7864916 | Msa1274060:CDS |
CCCACCTTAACATGAGTACT+AGG | 0.494087 | 8_3:-7865218 | None:intergenic |
GGTACGTCCGTAGCAAATAG+AGG | 0.495558 | 8_3:-7865344 | None:intergenic |
GAATGGCGGGATAGTACAAC+TGG | 0.496907 | 8_3:+7863018 | Msa1274060:CDS |
GACCTAGCTTGTATGATGAA+TGG | 0.497272 | 8_3:+7862389 | Msa1274060:CDS |
TCGGGATTGCAGCTACTGAA+TGG | 0.497998 | 8_3:+7863001 | Msa1274060:intron |
TTCTTATCACAGGTTCAAGT+TGG | 0.499270 | 8_3:+7861716 | Msa1274060:intron |
AGTACCATTCACTTCGATTG+AGG | 0.499342 | 8_3:+7859698 | Msa1274060:five_prime_UTR |
TCAGGTTTGCAGGAAGAAGA+TGG | 0.499604 | 8_3:+7863427 | Msa1274060:CDS |
AGCAAAATGTGAGAAATTGA+TGG | 0.501307 | 8_3:-7859621 | None:intergenic |
GTTCCTGGTAGATCTTGGAT+TGG | 0.502343 | 8_3:+7862889 | Msa1274060:CDS |
GCAACCGCCTCCACTTCAAC+CGG | 0.502414 | 8_3:-7859874 | None:intergenic |
TTGCAGCAGTCGATGTGATT+CGG | 0.503800 | 8_3:-7865109 | None:intergenic |
TCTTCCTTGGCAAGGATACC+AGG | 0.506247 | 8_3:+7863314 | Msa1274060:CDS |
AAGCTTGTTGGTCATAAAAG+AGG | 0.506773 | 8_3:+7863724 | Msa1274060:intron |
GTCACAGAAGAAGCAGGAAG+AGG | 0.507675 | 8_3:+7859840 | Msa1274060:CDS |
TGGGCCTTAATAATGGATGC+AGG | 0.508902 | 8_3:+7864382 | Msa1274060:CDS |
TTCTTGAGACTGCCAATCCA+TGG | 0.509369 | 8_3:+7865369 | Msa1274060:exon |
TTGTGGTCATAGCAATGATA+AGG | 0.509998 | 8_3:+7860065 | Msa1274060:CDS |
GGAAGTTTGAATGAGAGAAC+TGG | 0.512610 | 8_3:+7861821 | Msa1274060:CDS |
ACCAATTTCAAAATTCGTCA+AGG | 0.512784 | 8_3:+7859663 | Msa1274060:five_prime_UTR |
TACATTGCCTCTATTTGCTA+CGG | 0.513465 | 8_3:+7865337 | Msa1274060:CDS |
CATTGTAAACACTAATCCAT+TGG | 0.515189 | 8_3:-7863813 | None:intergenic |
TTTGAGCACACAAGTAGTAA+AGG | 0.516595 | 8_3:+7861982 | Msa1274060:CDS |
CCAATCCATGGAGGGGCTGA+AGG | 0.516762 | 8_3:+7865381 | Msa1274060:three_prime_UTR |
TGGGTTTACCAGCGAACCAA+TGG | 0.522242 | 8_3:+7863797 | Msa1274060:CDS |
AAAATCAATTTCCATACGAA+TGG | 0.525207 | 8_3:-7865617 | None:intergenic |
CATCATCTTCTGAAGCCAAT+CGG | 0.526443 | 8_3:-7863747 | None:intergenic |
TTCCTCCTCCTTCTCCTCTA+CGG | 0.526600 | 8_3:-7859986 | None:intergenic |
AGCACCCTCGGTGGAAGTCA+TGG | 0.528225 | 8_3:+7862155 | Msa1274060:intron |
GTTGGTCGGCGTGTTTCTGA+TGG | 0.531700 | 8_3:+7861800 | Msa1274060:CDS |
TGGAAGTCATGGTGTGCCAC+AGG | 0.533084 | 8_3:+7862166 | Msa1274060:CDS |
TCTTCGGTCTAAACGTACAT+TGG | 0.534383 | 8_3:-7865432 | None:intergenic |
AAGGAGTATTTCAATTTCAG+TGG | 0.534957 | 8_3:+7865400 | Msa1274060:three_prime_UTR |
GCGACAGTCACAGAAGAAGC+AGG | 0.535117 | 8_3:+7859834 | Msa1274060:CDS |
AGCAATGATAAGGCTAATGC+TGG | 0.535580 | 8_3:+7860075 | Msa1274060:CDS |
TCATTAGTAATAATGTCTAA+AGG | 0.537380 | 8_3:+7864684 | Msa1274060:CDS |
ATACTCCTTCAGCCCCTCCA+TGG | 0.538272 | 8_3:-7865386 | None:intergenic |
AGGAATGGATCATGGAGCAG+TGG | 0.538311 | 8_3:+7864613 | Msa1274060:intron |
GGATTTGGTCAAGTATATGT+TGG | 0.538392 | 8_3:+7861782 | Msa1274060:CDS |
GATTGCAGCTACTGAATGGC+GGG | 0.539376 | 8_3:+7863005 | Msa1274060:intron |
TGTGCACCTTCTGTATTCAG+TGG | 0.543491 | 8_3:-7863602 | None:intergenic |
TAGTGTTCTTTAATCTCAGA+GGG | 0.544345 | 8_3:+7860841 | Msa1274060:CDS |
GAGAAGGAGGAGGAAGCGGG+TGG | 0.545092 | 8_3:+7859994 | Msa1274060:CDS |
GGGGAGAAATGGAAGCAGGA+GGG | 0.548114 | 8_3:+7863242 | Msa1274060:CDS |
GCAAGATGGCTACTATATCA+TGG | 0.550126 | 8_3:+7862205 | Msa1274060:CDS |
AGTGATAGAGGAGAAACAGA+TGG | 0.551136 | 8_3:+7860029 | Msa1274060:CDS |
AATATGGCCATTATTGGTCC+CGG | 0.552109 | 8_3:-7860772 | None:intergenic |
TGGCTCAAGACAACACCTGC+CGG | 0.552755 | 8_3:-7860817 | None:intergenic |
ATGTGAGAAATTGATGGTGA+TGG | 0.552773 | 8_3:-7859615 | None:intergenic |
TAATGCGTAGTGGAGCGCGC+CGG | 0.554554 | 8_3:+7859797 | Msa1274060:CDS |
TTGGTCAAGTATATGTTGGT+CGG | 0.554790 | 8_3:+7861786 | Msa1274060:CDS |
GGTTGAAGAGGAGCCGGTAG+CGG | 0.556045 | 8_3:+7859936 | Msa1274060:CDS |
TGTTGTGGCCGTAGAGGAGA+AGG | 0.556462 | 8_3:+7859978 | Msa1274060:CDS |
TGAGACTGCCAATCCATGGA+GGG | 0.557505 | 8_3:+7865373 | Msa1274060:exon |
AGGAGTATTTCAATTTCAGT+GGG | 0.558076 | 8_3:+7865401 | Msa1274060:three_prime_UTR |
CAGTTGCAGGAATTGCAAAT+GGG | 0.559687 | 8_3:+7864658 | Msa1274060:CDS |
TACTCAGAACAAAAGCAGCT+TGG | 0.563974 | 8_3:-7865139 | None:intergenic |
ACAAAGGACCGCCAGAAGAG+TGG | 0.565133 | 8_3:+7862010 | Msa1274060:CDS |
GTGAAGGGATTCACAAGCGG+TGG | 0.565396 | 8_3:+7865075 | Msa1274060:CDS |
TGATTTGCCAGACAGGAAAA+GGG | 0.565450 | 8_3:+7860711 | Msa1274060:intron |
GGGAATATGACTTATCCGGC+AGG | 0.567717 | 8_3:+7860802 | Msa1274060:CDS |
ATTTGGGGAGAAATGGAAGC+AGG | 0.568992 | 8_3:+7863238 | Msa1274060:CDS |
GGAATGGATCATGGAGCAGT+GGG | 0.573163 | 8_3:+7864614 | Msa1274060:intron |
GAAGAAAACTCCGGTTGAAG+TGG | 0.574100 | 8_3:+7859864 | Msa1274060:CDS |
CATCCATTATTAAGGCCCAC+AGG | 0.574889 | 8_3:-7864378 | None:intergenic |
TGGTCATAAAAGAGGCCGAT+TGG | 0.576508 | 8_3:+7863732 | Msa1274060:CDS |
TTGCCTTTGTAATGTACCTG+TGG | 0.576625 | 8_3:-7862182 | None:intergenic |
ACGAAACTCAAGAAACACTA+AGG | 0.576890 | 8_3:+7865183 | Msa1274060:CDS |
TATTCCAGAGAATAAGCTGC+AGG | 0.578410 | 8_3:+7865160 | Msa1274060:CDS |
CAGGTTTGCAGGAAGAAGAT+GGG | 0.578830 | 8_3:+7863428 | Msa1274060:CDS |
CATTACAAAGGCAAGCAAGA+TGG | 0.579097 | 8_3:+7862191 | Msa1274060:CDS |
TACGCCTCAATCGAAGTGAA+TGG | 0.579913 | 8_3:-7859702 | None:intergenic |
AACTCCGGTTGAAGTGGAGG+CGG | 0.582166 | 8_3:+7859870 | Msa1274060:CDS |
TTCCATTCATCATACAAGCT+AGG | 0.582966 | 8_3:-7862391 | None:intergenic |
AGCTGTTGTTGTGGCCGTAG+AGG | 0.583732 | 8_3:+7859972 | Msa1274060:CDS |
CGCTTGTGAATCCCTTCACT+AGG | 0.585221 | 8_3:-7865071 | None:intergenic |
GGCCGTAGAGGAGAAGGAGG+AGG | 0.585511 | 8_3:+7859984 | Msa1274060:CDS |
GATAGAGGAGAAACAGATGG+AGG | 0.585778 | 8_3:+7860032 | Msa1274060:CDS |
GAAAACTCCGGTTGAAGTGG+AGG | 0.586374 | 8_3:+7859867 | Msa1274060:CDS |
GGCGGCGGTTGAAGAGGAGC+CGG | 0.586448 | 8_3:+7859930 | Msa1274060:CDS |
CGAGGTCGTCTTCCTTGGCA+AGG | 0.587227 | 8_3:+7863306 | Msa1274060:CDS |
ATGGAGGAATTTGATCGTTG+TGG | 0.588014 | 8_3:+7860048 | Msa1274060:CDS |
TTAGTGTTCTTTAATCTCAG+AGG | 0.589350 | 8_3:+7860840 | Msa1274060:CDS |
TTTCGATCGATGAACAATGC+CGG | 0.589395 | 8_3:+7859774 | Msa1274060:exon |
ACGTCATCATTTACCGCTAC+CGG | 0.589532 | 8_3:-7859949 | None:intergenic |
GGATTGGCAGTCTCAAGAAA+CGG | 0.590430 | 8_3:-7865365 | None:intergenic |
AGTTAGAGCTTTAACAGACT+GGG | 0.593442 | 8_3:-7860739 | None:intergenic |
AGCATGTCAAGAAGTTTGAT+GGG | 0.594345 | 8_3:+7865497 | Msa1274060:three_prime_UTR |
GCACATTGACAAAGGAAATG+AGG | 0.597073 | 8_3:+7864318 | Msa1274060:CDS |
TAGTACAACTGGTTTGCAAG+TGG | 0.599814 | 8_3:+7863029 | Msa1274060:CDS |
TTCGCTCAGGGAGAAAACAA+AGG | 0.600597 | 8_3:+7863401 | Msa1274060:intron |
TATATGGGTAGGTATGTGCA+TGG | 0.608359 | 8_3:+7862806 | Msa1274060:intron |
TTGGAGAAGATGCACTCTCG+AGG | 0.609670 | 8_3:+7862582 | Msa1274060:CDS |
AGCAAATAGAGGCAATGTAG+AGG | 0.614096 | 8_3:-7865333 | None:intergenic |
CTCGTAGACCAATGAAACAA+AGG | 0.617006 | 8_3:+7863836 | Msa1274060:CDS |
CACACCATGACTTCCACCGA+GGG | 0.617170 | 8_3:-7862159 | None:intergenic |
AGTAGTAAAGGATGTAACAA+AGG | 0.619173 | 8_3:+7861994 | Msa1274060:CDS |
TACGCTTTCCACTCTTCTGG+CGG | 0.620763 | 8_3:-7862018 | None:intergenic |
GGGCCTTAATAATGGATGCA+GGG | 0.621365 | 8_3:+7864383 | Msa1274060:CDS |
TGAAGGGATTCACAAGCGGT+GGG | 0.622289 | 8_3:+7865076 | Msa1274060:CDS |
CTATCACAGCACATTGACAA+AGG | 0.627189 | 8_3:+7864310 | Msa1274060:CDS |
TGTGGCCGTAGAGGAGAAGG+AGG | 0.627817 | 8_3:+7859981 | Msa1274060:CDS |
GCTGGTGAAGAAGATAGTAA+TGG | 0.631286 | 8_3:+7860093 | Msa1274060:CDS |
TAACTTCAATGGCCACAGCA+GGG | 0.633038 | 8_3:+7864881 | Msa1274060:CDS |
TACCCAATCCAAGATCTACC+AGG | 0.633951 | 8_3:-7862892 | None:intergenic |
GGAAGAGGAGAAGAAAACTC+CGG | 0.636000 | 8_3:+7859855 | Msa1274060:CDS |
ATTGACAAAGGAAATGAGGA+TGG | 0.636401 | 8_3:+7864322 | Msa1274060:CDS |
TTGAGACTGCCAATCCATGG+AGG | 0.637772 | 8_3:+7865372 | Msa1274060:exon |
TGGAGAAGATGCACTCTCGA+GGG | 0.640105 | 8_3:+7862583 | Msa1274060:CDS |
CGAACCTGGTATCCTTGCCA+AGG | 0.641947 | 8_3:-7863318 | None:intergenic |
GGATTGCAGCTACTGAATGG+CGG | 0.643976 | 8_3:+7863004 | Msa1274060:intron |
TGCAAGTGGACTATGACCAA+AGG | 0.644519 | 8_3:+7863043 | Msa1274060:CDS |
AATACAAGCAACCATTTCAG+TGG | 0.645015 | 8_3:-7862538 | None:intergenic |
GAGAAATTGATGGTGATGGA+AGG | 0.647336 | 8_3:-7859611 | None:intergenic |
ATTAGGCCACTGAATACAGA+AGG | 0.651859 | 8_3:+7863596 | Msa1274060:CDS |
TGTGCATGGAGATGTGAAGC+CGG | 0.653590 | 8_3:+7862820 | Msa1274060:CDS |
TAGTTATGTCTAAAGGGACA+GGG | 0.654878 | 8_3:+7864917 | Msa1274060:CDS |
TGGGGAGAAATGGAAGCAGG+AGG | 0.657411 | 8_3:+7863241 | Msa1274060:CDS |
CTTGCCAAGGAAGACGACCT+CGG | 0.657610 | 8_3:-7863305 | None:intergenic |
GAGACTGCCAATCCATGGAG+GGG | 0.658011 | 8_3:+7865374 | Msa1274060:exon |
ACAATGCCGGTAATGCGTAG+TGG | 0.659660 | 8_3:+7859787 | Msa1274060:exon |
TGATGACGTAGCTGTTGTTG+TGG | 0.664837 | 8_3:+7859963 | Msa1274060:CDS |
CAAGTGTGCATTCACATTTG+GGG | 0.674469 | 8_3:+7863223 | Msa1274060:CDS |
TTTCTCATCGGGTGTCCCCG+AGG | 0.676645 | 8_3:-7862861 | None:intergenic |
GTGCCACAGGTACATTACAA+AGG | 0.680188 | 8_3:+7862179 | Msa1274060:CDS |
AAACAGCATAGGTTCTCTGG+AGG | 0.692660 | 8_3:-7863455 | None:intergenic |
CTAGTGAAGGGATTCACAAG+CGG | 0.700422 | 8_3:+7865072 | Msa1274060:CDS |
TATTTGTGCAGCACCCTCGG+TGG | 0.705685 | 8_3:+7862146 | Msa1274060:intron |
TGGTTGATACACGAAAGTGA+AGG | 0.711505 | 8_3:-7859644 | None:intergenic |
GTGAATGCACACTTGCATAG+CGG | 0.721588 | 8_3:-7863215 | None:intergenic |
CGGTTGCGACGAGAACAAGA+CGG | 0.733543 | 8_3:+7859890 | Msa1274060:CDS |
GCACACCATGACTTCCACCG+AGG | 0.742653 | 8_3:-7862160 | None:intergenic |
TTGCGACGAGAACAAGACGG+CGG | 0.766461 | 8_3:+7859893 | Msa1274060:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTATAATAAAAATAAT+TGG | + | chr8_3:7862754-7862773 | Msa1274060:intron | 0.0% |
!! | TATTTATTTGTAATTTATTC+AGG | - | chr8_3:7861463-7861482 | None:intergenic | 10.0% |
!!! | GTTTTATTTTTTAATCATTT+GGG | + | chr8_3:7862239-7862258 | Msa1274060:intron | 10.0% |
!! | TGATTAAAGTTAATATAATA+TGG | - | chr8_3:7863168-7863187 | None:intergenic | 10.0% |
!!! | AATATTCATTTTATGACTAT+AGG | - | chr8_3:7861146-7861165 | None:intergenic | 15.0% |
!! | TTAAACGAATTATTGTTAAA+AGG | - | chr8_3:7861553-7861572 | None:intergenic | 15.0% |
!!! | ATTTTAATTTCAGGAATTTA+CGG | + | chr8_3:7861928-7861947 | Msa1274060:intron | 15.0% |
!!! | TTTTTAATTATTTTATCAGG+TGG | + | chr8_3:7861951-7861970 | Msa1274060:intron | 15.0% |
!!! | TAATTTCCTATCTATTTTTA+GGG | + | chr8_3:7862080-7862099 | Msa1274060:intron | 15.0% |
!! | AATTATAGGAAAATATACAT+AGG | - | chr8_3:7862123-7862142 | None:intergenic | 15.0% |
!!! | GGTTTTATTTTTTAATCATT+TGG | + | chr8_3:7862238-7862257 | Msa1274060:intron | 15.0% |
!!! | GTTTTTGATTGATTATTTAT+TGG | + | chr8_3:7862916-7862935 | Msa1274060:intron | 15.0% |
!!! | GTTTAAATATCTGATAATTT+TGG | + | chr8_3:7863097-7863116 | Msa1274060:intron | 15.0% |
!!! | ATCATATGAAAAATATTTTC+AGG | + | chr8_3:7863184-7863203 | Msa1274060:intron | 15.0% |
!!! | TCATATGAAAAATATTTTCA+GGG | + | chr8_3:7863185-7863204 | Msa1274060:intron | 15.0% |
!! | AAAAAAAAACACAAGTAAAA+GGG | - | chr8_3:7863647-7863666 | None:intergenic | 15.0% |
!! | AAAAAAAAAACACAAGTAAA+AGG | - | chr8_3:7863648-7863667 | None:intergenic | 15.0% |
!! | ATAGATTTAAATTTACCTTA+TGG | - | chr8_3:7864453-7864472 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTTTGAAGGAA+TGG | + | chr8_3:7864598-7864617 | Msa1274060:intron | 15.0% |
!!! | TCCTTTTAAGTTATATATAT+TGG | + | chr8_3:7864712-7864731 | Msa1274060:intron | 15.0% |
!!! | AAAAAAAACACAATTTTCTT+CGG | - | chr8_3:7865451-7865470 | None:intergenic | 15.0% |
!!! | AAGAAAATTGTGTTTTTTTT+GGG | + | chr8_3:7865451-7865470 | Msa1274060:three_prime_UTR | 15.0% |
!!! | TACTCATTTTAATTTTTTGA+AGG | + | chr8_3:7865702-7865721 | Msa1274060:three_prime_UTR | 15.0% |
!!! | ACTCATTTTAATTTTAAGTT+TGG | + | chr8_3:7865736-7865755 | Msa1274060:three_prime_UTR | 15.0% |
!!! | AATTTAACCTTTTTTTTACA+TGG | - | chr8_3:7865779-7865798 | None:intergenic | 15.0% |
!! | TAATAACAACAAAAAACCAA+TGG | - | chr8_3:7860684-7860703 | None:intergenic | 20.0% |
!!! | TAAAATACAAGTTGAAATCA+TGG | + | chr8_3:7860937-7860956 | Msa1274060:intron | 20.0% |
!! | ATTTCGTGATCTTATAAATA+TGG | + | chr8_3:7861294-7861313 | Msa1274060:intron | 20.0% |
!!! | GTACATTATTTTAAATGGAA+GGG | - | chr8_3:7861367-7861386 | None:intergenic | 20.0% |
!!! | CTTCCATTTAAAATAATGTA+CGG | + | chr8_3:7861366-7861385 | Msa1274060:intron | 20.0% |
!!! | ATTCCGTACATTATTTTAAA+TGG | - | chr8_3:7861372-7861391 | None:intergenic | 20.0% |
!!! | TTTTTCTCTGTTTTATACAA+AGG | - | chr8_3:7861749-7861768 | None:intergenic | 20.0% |
!! | TATAAAACAGAGAAAAAACT+TGG | + | chr8_3:7861752-7861771 | Msa1274060:CDS | 20.0% |
!!! | TGCTAAAGTATTTTAATTTC+AGG | + | chr8_3:7861919-7861938 | Msa1274060:intron | 20.0% |
!!! | CGGTTTTTAATTATTTTATC+AGG | + | chr8_3:7861948-7861967 | Msa1274060:intron | 20.0% |
!!! | GTAATTTCCTATCTATTTTT+AGG | + | chr8_3:7862079-7862098 | Msa1274060:intron | 20.0% |
!! | CTGCACAAATAAAAAATTAT+AGG | - | chr8_3:7862137-7862156 | None:intergenic | 20.0% |
!!! | ACATTTCTTTTATTTGAGTT+TGG | + | chr8_3:7862305-7862324 | Msa1274060:intron | 20.0% |
!!! | GCATCATATAATTATTCTTT+TGG | + | chr8_3:7862962-7862981 | Msa1274060:intron | 20.0% |
!!! | CATATGAAAAATATTTTCAG+GGG | + | chr8_3:7863186-7863205 | Msa1274060:intron | 20.0% |
!!! | TAACAAGTTTTAAGACTTAT+TGG | - | chr8_3:7864041-7864060 | None:intergenic | 20.0% |
!! | AAATCACAATCTTAAAAATG+AGG | - | chr8_3:7864107-7864126 | None:intergenic | 20.0% |
!! | CCAAAAGATTAAAAAATGTA+AGG | - | chr8_3:7864169-7864188 | None:intergenic | 20.0% |
!!! | CCTTACATTTTTTAATCTTT+TGG | + | chr8_3:7864166-7864185 | Msa1274060:intron | 20.0% |
!!! | GTTTAAAACTTATGATGTAA+TGG | + | chr8_3:7864220-7864239 | Msa1274060:intron | 20.0% |
!! | ATTTACCTTATGGAAAAATT+GGG | - | chr8_3:7864443-7864462 | None:intergenic | 20.0% |
!! | AATTTACCTTATGGAAAAAT+TGG | - | chr8_3:7864444-7864463 | None:intergenic | 20.0% |
!! | TCATTAGTAATAATGTCTAA+AGG | + | chr8_3:7864684-7864703 | Msa1274060:CDS | 20.0% |
!! | GCCAATATATATAACTTAAA+AGG | - | chr8_3:7864716-7864735 | None:intergenic | 20.0% |
!! | ACTTTATGTTTATGTATAAC+AGG | + | chr8_3:7865025-7865044 | Msa1274060:intron | 20.0% |
!!! | GAAGAAAATTGTGTTTTTTT+TGG | + | chr8_3:7865450-7865469 | Msa1274060:three_prime_UTR | 20.0% |
!!! | AGTGTTTATTTTATGTATGT+AGG | + | chr8_3:7865548-7865567 | Msa1274060:three_prime_UTR | 20.0% |
!!! | TTTATTTTATGTATGTAGGA+TGG | + | chr8_3:7865552-7865571 | Msa1274060:three_prime_UTR | 20.0% |
!!! | TTATTTTATGTATGTAGGAT+GGG | + | chr8_3:7865553-7865572 | Msa1274060:three_prime_UTR | 20.0% |
!!! | TTTTAATTTTTTGAAGGAAC+AGG | + | chr8_3:7865708-7865727 | Msa1274060:three_prime_UTR | 20.0% |
!!! | GTGTAAATTGTTGTTTGAAT+TGG | + | chr8_3:7860211-7860230 | Msa1274060:intron | 25.0% |
!!! | TTCATTTTTGTTGGTAATGT+GGG | + | chr8_3:7860291-7860310 | Msa1274060:intron | 25.0% |
! | TTCTATGACCAATATAAAGT+GGG | - | chr8_3:7861008-7861027 | None:intergenic | 25.0% |
! | ATTCTATGACCAATATAAAG+TGG | - | chr8_3:7861009-7861028 | None:intergenic | 25.0% |
! | ACTTTATATTGGTCATAGAA+TGG | + | chr8_3:7861008-7861027 | Msa1274060:intron | 25.0% |
!! | GTTGATAAGATAAATTGTTG+TGG | - | chr8_3:7861094-7861113 | None:intergenic | 25.0% |
!! | TTCATTTTATGACTATAGGT+AGG | - | chr8_3:7861142-7861161 | None:intergenic | 25.0% |
! | AAAATGAATATTTAGTGTGC+TGG | + | chr8_3:7861154-7861173 | Msa1274060:intron | 25.0% |
! | TATGCATTAAAGAAACTACT+GGG | - | chr8_3:7861182-7861201 | None:intergenic | 25.0% |
!!! | ATACTCTGTATTGATTCTTA+AGG | + | chr8_3:7861199-7861218 | Msa1274060:intron | 25.0% |
! | ATGATCATATACTATTCCTA+GGG | - | chr8_3:7861329-7861348 | None:intergenic | 25.0% |
! | AATGATCATATACTATTCCT+AGG | - | chr8_3:7861330-7861349 | None:intergenic | 25.0% |
! | GTATATGATCATTTGTCTAA+TGG | + | chr8_3:7861337-7861356 | Msa1274060:intron | 25.0% |
!!! | CGTACATTATTTTAAATGGA+AGG | - | chr8_3:7861368-7861387 | None:intergenic | 25.0% |
!!! | TATTGCCTTTTGATTAACAT+TGG | + | chr8_3:7861420-7861439 | Msa1274060:intron | 25.0% |
! | AAATGCCAATGTTAATCAAA+AGG | - | chr8_3:7861428-7861447 | None:intergenic | 25.0% |
! | CATAACAGACTTATAGATTA+GGG | - | chr8_3:7861668-7861687 | None:intergenic | 25.0% |
!!! | TTTTGTTTTCTTCTTATCAC+AGG | + | chr8_3:7861706-7861725 | Msa1274060:intron | 25.0% |
!!! | ACTAATCACATAGTATTGAT+AGG | - | chr8_3:7861873-7861892 | None:intergenic | 25.0% |
! | AACATACCCTAAAAATAGAT+AGG | - | chr8_3:7862089-7862108 | None:intergenic | 25.0% |
! | ACTATATCATGGTATGTTAT+TGG | + | chr8_3:7862216-7862235 | Msa1274060:intron | 25.0% |
! | CTATATCATGGTATGTTATT+GGG | + | chr8_3:7862217-7862236 | Msa1274060:intron | 25.0% |
! | ATTATGTTTCCTACACTATA+TGG | + | chr8_3:7862778-7862797 | Msa1274060:intron | 25.0% |
!! | GAAATGTATTTTGCATAGTT+GGG | - | chr8_3:7863542-7863561 | None:intergenic | 25.0% |
!! | AGAAATGTATTTTGCATAGT+TGG | - | chr8_3:7863543-7863562 | None:intergenic | 25.0% |
! | AAATACATTTCTCTCTTTGA+TGG | + | chr8_3:7863551-7863570 | Msa1274060:CDS | 25.0% |
! | AATACATTTCTCTCTTTGAT+GGG | + | chr8_3:7863552-7863571 | Msa1274060:CDS | 25.0% |
! | AAAAAAAATAGCAGTGTCAA+AGG | - | chr8_3:7863697-7863716 | None:intergenic | 25.0% |
!!! | AATGACAAATAAGGGTATTA+TGG | - | chr8_3:7863998-7864017 | None:intergenic | 25.0% |
!!! | GTCTTAAAACTTGTTATATC+AGG | + | chr8_3:7864045-7864064 | Msa1274060:intron | 25.0% |
!!! | GTGTTTTAAAATTGATGCAA+GGG | + | chr8_3:7864067-7864086 | Msa1274060:intron | 25.0% |
!!! | TGTTTTAAAATTGATGCAAG+GGG | + | chr8_3:7864068-7864087 | Msa1274060:intron | 25.0% |
! | TTACAAAAGTTAGATGCTTA+GGG | + | chr8_3:7864189-7864208 | Msa1274060:intron | 25.0% |
!!! | TACATCATAAGTTTTAAACC+CGG | - | chr8_3:7864219-7864238 | None:intergenic | 25.0% |
! | TTTACCTTATGGAAAAATTG+GGG | - | chr8_3:7864442-7864461 | None:intergenic | 25.0% |
!!! | AAATTTTAATCCCAGTTTCA+AGG | + | chr8_3:7864541-7864560 | Msa1274060:intron | 25.0% |
! | GCATGCTTATTATTAACTTA+GGG | + | chr8_3:7864563-7864582 | Msa1274060:intron | 25.0% |
! | TAGTAATAATGTCTAAAGGT+TGG | + | chr8_3:7864688-7864707 | Msa1274060:intron | 25.0% |
!!! | ATATATTGGCTTATGTACTT+TGG | + | chr8_3:7864726-7864745 | Msa1274060:intron | 25.0% |
!! | TTTTTGCTAATCCATTTGAA+AGG | - | chr8_3:7864841-7864860 | None:intergenic | 25.0% |
!!! | GAAGTTTTTTGTAACTTCAA+TGG | + | chr8_3:7864870-7864889 | Msa1274060:CDS | 25.0% |
! | TTATGTTTATGTATAACAGG+CGG | + | chr8_3:7865028-7865047 | Msa1274060:intron | 25.0% |
! | AAAATCAATTTCCATACGAA+TGG | - | chr8_3:7865620-7865639 | None:intergenic | 25.0% |
! | ATATGAGCCATGTAAAAAAA+AGG | + | chr8_3:7865769-7865788 | Msa1274060:three_prime_UTR | 25.0% |
AGCAAAATGTGAGAAATTGA+TGG | - | chr8_3:7859624-7859643 | None:intergenic | 30.0% | |
ACCAATTTCAAAATTCGTCA+AGG | + | chr8_3:7859663-7859682 | Msa1274060:five_prime_UTR | 30.0% | |
!!! | ACCTTGACGAATTTTGAAAT+TGG | - | chr8_3:7859667-7859686 | None:intergenic | 30.0% |
ACTAAAAGATAGAACTTGCA+TGG | - | chr8_3:7860153-7860172 | None:intergenic | 30.0% | |
!! | TTGTTGTTTGAATTGGTGTT+AGG | + | chr8_3:7860218-7860237 | Msa1274060:intron | 30.0% |
!! | TGTTGTTTGAATTGGTGTTA+GGG | + | chr8_3:7860219-7860238 | Msa1274060:intron | 30.0% |
!!! | GTTCATTTTTGTTGGTAATG+TGG | + | chr8_3:7860290-7860309 | Msa1274060:intron | 30.0% |
! | GACATTTTACGTGGAATATT+GGG | + | chr8_3:7860462-7860481 | Msa1274060:intron | 30.0% |
CTGAGATTAAAGAACACTAA+TGG | - | chr8_3:7860840-7860859 | None:intergenic | 30.0% | |
TTAGTGTTCTTTAATCTCAG+AGG | + | chr8_3:7860840-7860859 | Msa1274060:CDS | 30.0% | |
TAGTGTTCTTTAATCTCAGA+GGG | + | chr8_3:7860841-7860860 | Msa1274060:CDS | 30.0% | |
TTGAAAACCGAAATGACATT+CGG | + | chr8_3:7860892-7860911 | Msa1274060:CDS | 30.0% | |
TCTATGACCAATATAAAGTG+GGG | - | chr8_3:7861007-7861026 | None:intergenic | 30.0% | |
! | CTGTCACATTGTTCTTTTAT+TGG | + | chr8_3:7861033-7861052 | Msa1274060:intron | 30.0% |
TAAGTAGGATTGTCTAACAT+GGG | - | chr8_3:7861116-7861135 | None:intergenic | 30.0% | |
TTAAGTAGGATTGTCTAACA+TGG | - | chr8_3:7861117-7861136 | None:intergenic | 30.0% | |
ACTATAGGTAGGATTTAAGT+AGG | - | chr8_3:7861131-7861150 | None:intergenic | 30.0% | |
GTATGCATTAAAGAAACTAC+TGG | - | chr8_3:7861183-7861202 | None:intergenic | 30.0% | |
!!! | AATATGGCTTTTTTTTCCCT+AGG | + | chr8_3:7861310-7861329 | Msa1274060:intron | 30.0% |
TAATGTACGGAATGATATTG+TGG | + | chr8_3:7861379-7861398 | Msa1274060:intron | 30.0% | |
! | CAAAAGGCAATATTTCTGTT+AGG | - | chr8_3:7861412-7861431 | None:intergenic | 30.0% |
TGATCCATTATAAGACAGTA+CGG | + | chr8_3:7861503-7861522 | Msa1274060:intron | 30.0% | |
!! | TGTTAAAAGGTACTGCTATA+GGG | - | chr8_3:7861540-7861559 | None:intergenic | 30.0% |
!! | TTGTTAAAAGGTACTGCTAT+AGG | - | chr8_3:7861541-7861560 | None:intergenic | 30.0% |
GCATAACAGACTTATAGATT+AGG | - | chr8_3:7861669-7861688 | None:intergenic | 30.0% | |
! | ACTTGTGTGCTCAAATTTTA+TGG | - | chr8_3:7861977-7861996 | None:intergenic | 30.0% |
AGTAGTAAAGGATGTAACAA+AGG | + | chr8_3:7861994-7862013 | Msa1274060:CDS | 30.0% | |
!! | TTTGAGTTTGGTTTGTTTGA+AGG | + | chr8_3:7862317-7862336 | Msa1274060:intron | 30.0% |
ATGAAAGTAGTAAGACAAAC+AGG | - | chr8_3:7862345-7862364 | None:intergenic | 30.0% | |
ACTTTCATATGTGCAGATTA+TGG | + | chr8_3:7862357-7862376 | Msa1274060:intron | 30.0% | |
GACAGTCAAAATTAACAACA+GGG | - | chr8_3:7862478-7862497 | None:intergenic | 30.0% | |
TGACAGTCAAAATTAACAAC+AGG | - | chr8_3:7862479-7862498 | None:intergenic | 30.0% | |
CAATATGGATATTGCTTCAA+TGG | - | chr8_3:7862565-7862584 | None:intergenic | 30.0% | |
CATTGAAGCAATATCCATAT+TGG | + | chr8_3:7862563-7862582 | Msa1274060:CDS | 30.0% | |
TCAATTTCCGTTCATTTCTT+TGG | + | chr8_3:7862620-7862639 | Msa1274060:intron | 30.0% | |
CAATTTCCGTTCATTTCTTT+GGG | + | chr8_3:7862621-7862640 | Msa1274060:intron | 30.0% | |
ATGTAAATTGCTAATGTCAG+CGG | - | chr8_3:7862715-7862734 | None:intergenic | 30.0% | |
TATACATCACCATATAGTGT+AGG | - | chr8_3:7862790-7862809 | None:intergenic | 30.0% | |
! | ACACTATATGGTGATGTATA+TGG | + | chr8_3:7862790-7862809 | Msa1274060:intron | 30.0% |
! | CACTATATGGTGATGTATAT+GGG | + | chr8_3:7862791-7862810 | Msa1274060:intron | 30.0% |
!!! | AGGAACAATTTTTTCTCATC+GGG | - | chr8_3:7862875-7862894 | None:intergenic | 30.0% |
!!! | CAGGAACAATTTTTTCTCAT+CGG | - | chr8_3:7862876-7862895 | None:intergenic | 30.0% |
AATCGATACCTGAAAATATC+AGG | - | chr8_3:7863069-7863088 | None:intergenic | 30.0% | |
TTGTTAAAATATGACGAACC+TGG | - | chr8_3:7863335-7863354 | None:intergenic | 30.0% | |
AAAAAACACAAGTAAAAGGG+TGG | - | chr8_3:7863644-7863663 | None:intergenic | 30.0% | |
! | TTTTTCTTCTTGAAGCTTGT+TGG | + | chr8_3:7863712-7863731 | Msa1274060:intron | 30.0% |
CATTGTAAACACTAATCCAT+TGG | - | chr8_3:7863816-7863835 | None:intergenic | 30.0% | |
! | AGTGTATACCTTTGTTTCAT+TGG | - | chr8_3:7863847-7863866 | None:intergenic | 30.0% |
AGGTATTTGAGTAGTTAGTA+GGG | - | chr8_3:7863909-7863928 | None:intergenic | 30.0% | |
AGGCAACTAATGACAAATAA+GGG | - | chr8_3:7864006-7864025 | None:intergenic | 30.0% | |
AAGGCAACTAATGACAAATA+AGG | - | chr8_3:7864007-7864026 | None:intergenic | 30.0% | |
AAGACTTATTGGTGTATGAT+GGG | - | chr8_3:7864030-7864049 | None:intergenic | 30.0% | |
TAAGACTTATTGGTGTATGA+TGG | - | chr8_3:7864031-7864050 | None:intergenic | 30.0% | |
!!! | GGTGTTTTAAAATTGATGCA+AGG | + | chr8_3:7864066-7864085 | Msa1274060:intron | 30.0% |
TATGATGCAACATATGGTAT+GGG | - | chr8_3:7864135-7864154 | None:intergenic | 30.0% | |
ATATGATGCAACATATGGTA+TGG | - | chr8_3:7864136-7864155 | None:intergenic | 30.0% | |
CAAACATATGATGCAACATA+TGG | - | chr8_3:7864141-7864160 | None:intergenic | 30.0% | |
GTTACAAAAGTTAGATGCTT+AGG | + | chr8_3:7864188-7864207 | Msa1274060:intron | 30.0% | |
GAATTTCTATGCATTAAGAG+TGG | + | chr8_3:7864242-7864261 | Msa1274060:intron | 30.0% | |
TTACCTTATGGAAAAATTGG+GGG | - | chr8_3:7864441-7864460 | None:intergenic | 30.0% | |
TTCACAAGTAGAAGAATGTA+TGG | - | chr8_3:7864478-7864497 | None:intergenic | 30.0% | |
AATTTCTACAAGCATATAGC+TGG | - | chr8_3:7864526-7864545 | None:intergenic | 30.0% | |
GGCATGCTTATTATTAACTT+AGG | + | chr8_3:7864562-7864581 | Msa1274060:intron | 30.0% | |
!!! | TTTTTTGAAGGAATGGATCA+TGG | + | chr8_3:7864605-7864624 | Msa1274060:intron | 30.0% |
GTGATTCATTTCCTTTCAAA+TGG | + | chr8_3:7864827-7864846 | Msa1274060:CDS | 30.0% | |
!! | TCAAATGGATTAGCAAAAAG+TGG | + | chr8_3:7864842-7864861 | Msa1274060:CDS | 30.0% |
! | TTTTCAAAACAGGTCATCTT+TGG | + | chr8_3:7864940-7864959 | Msa1274060:intron | 30.0% |
! | ATTTTCTGTATCCTAGTGAA+GGG | + | chr8_3:7865060-7865079 | Msa1274060:CDS | 30.0% |
! | TTTTCCTAGTACTCATGTTA+AGG | + | chr8_3:7865214-7865233 | Msa1274060:CDS | 30.0% |
! | CTGATGATACTTGATTTTAC+AGG | + | chr8_3:7865294-7865313 | Msa1274060:intron | 30.0% |
!! | AAGGAGTATTTCAATTTCAG+TGG | + | chr8_3:7865400-7865419 | Msa1274060:three_prime_UTR | 30.0% |
!! | AGGAGTATTTCAATTTCAGT+GGG | + | chr8_3:7865401-7865420 | Msa1274060:three_prime_UTR | 30.0% |
!!! | TTTTGGGACAAACATACTTT+TGG | + | chr8_3:7865467-7865486 | Msa1274060:three_prime_UTR | 30.0% |
! | ATCTCAATTTTCCATTCGTA+TGG | + | chr8_3:7865606-7865625 | Msa1274060:three_prime_UTR | 30.0% |
!!! | TTTTTTATACAGGTACAGAC+AGG | + | chr8_3:7865677-7865696 | Msa1274060:three_prime_UTR | 30.0% |
AGAAGAAGAAGAAGAAACTG+TGG | - | chr8_3:7859543-7859562 | None:intergenic | 35.0% | |
!! | GAATTTTAGCGTCGGAATTA+GGG | - | chr8_3:7859592-7859611 | None:intergenic | 35.0% |
!! | ATGTGAGAAATTGATGGTGA+TGG | - | chr8_3:7859618-7859637 | None:intergenic | 35.0% |
!!! | GAGGCGTAAATAGTTTTGAT+CGG | + | chr8_3:7859717-7859736 | Msa1274060:five_prime_UTR | 35.0% |
! | AAACGCGACTTTCAATTTTC+CGG | + | chr8_3:7859744-7859763 | Msa1274060:five_prime_UTR | 35.0% |
! | CATCGATCGAAAATTTTCAC+CGG | - | chr8_3:7859766-7859785 | None:intergenic | 35.0% |
TTGTGGTCATAGCAATGATA+AGG | + | chr8_3:7860065-7860084 | Msa1274060:CDS | 35.0% | |
!! | TGGCTTTGTTATTCCTGAAA+AGG | + | chr8_3:7860113-7860132 | Msa1274060:CDS | 35.0% |
! | AGCAAAAAATGGACCTTTTC+AGG | - | chr8_3:7860129-7860148 | None:intergenic | 35.0% |
ACTTGCATGGTAGCAAAAAA+TGG | - | chr8_3:7860140-7860159 | None:intergenic | 35.0% | |
!!! | TTCATGTTTTGGTAGCTTGA+TGG | + | chr8_3:7860252-7860271 | Msa1274060:intron | 35.0% |
!!! | TCATGTTTTGGTAGCTTGAT+GGG | + | chr8_3:7860253-7860272 | Msa1274060:intron | 35.0% |
!! | TGCACGTAGTTCATTTTTGT+TGG | + | chr8_3:7860282-7860301 | Msa1274060:intron | 35.0% |
!!! | AGTGTGATTTTGATTGCTTG+TGG | + | chr8_3:7860369-7860388 | Msa1274060:intron | 35.0% |
AAACCACTGGAATTTAACTC+GGG | - | chr8_3:7860433-7860452 | None:intergenic | 35.0% | |
CAAACCACTGGAATTTAACT+CGG | - | chr8_3:7860434-7860453 | None:intergenic | 35.0% | |
! | GGACATTTTACGTGGAATAT+TGG | + | chr8_3:7860461-7860480 | Msa1274060:intron | 35.0% |
AAATAAACACGCACATGGAA+GGG | - | chr8_3:7860510-7860529 | None:intergenic | 35.0% | |
TACTCAAATAAACACGCACA+TGG | - | chr8_3:7860515-7860534 | None:intergenic | 35.0% | |
! | CTAAACAACTAGACTGACTT+TGG | - | chr8_3:7860621-7860640 | None:intergenic | 35.0% |
! | TTGTTTAGAGTTACCTGTTG+TGG | + | chr8_3:7860633-7860652 | Msa1274060:intron | 35.0% |
! | AGTTAGAGCTTTAACAGACT+GGG | - | chr8_3:7860742-7860761 | None:intergenic | 35.0% |
ATCACGAATATGGCCATTAT+TGG | - | chr8_3:7860781-7860800 | None:intergenic | 35.0% | |
ATAATGGCCATATTCGTGAT+TGG | + | chr8_3:7860781-7860800 | Msa1274060:CDS | 35.0% | |
TAATGGCCATATTCGTGATT+GGG | + | chr8_3:7860782-7860801 | Msa1274060:CDS | 35.0% | |
CATATTCCCAATCACGAATA+TGG | - | chr8_3:7860791-7860810 | None:intergenic | 35.0% | |
GATTGGGAATATGACTTATC+CGG | + | chr8_3:7860798-7860817 | Msa1274060:CDS | 35.0% | |
ATATAAAGTGGGGGGAAATA+GGG | - | chr8_3:7860997-7861016 | None:intergenic | 35.0% | |
AATATAAAGTGGGGGGAAAT+AGG | - | chr8_3:7860998-7861017 | None:intergenic | 35.0% | |
TATTTCCCCCCACTTTATAT+TGG | + | chr8_3:7860997-7861016 | Msa1274060:intron | 35.0% | |
TATGACCAATATAAAGTGGG+GGG | - | chr8_3:7861005-7861024 | None:intergenic | 35.0% | |
CTATGACCAATATAAAGTGG+GGG | - | chr8_3:7861006-7861025 | None:intergenic | 35.0% | |
!! | GGTTTCTAAAACACAGCATT+TGG | + | chr8_3:7861054-7861073 | Msa1274060:intron | 35.0% |
AATGCCGTACTGTCTTATAA+TGG | - | chr8_3:7861510-7861529 | None:intergenic | 35.0% | |
CGTTTCTCTTCAATCATGTA+CGG | + | chr8_3:7861602-7861621 | Msa1274060:intron | 35.0% | |
GTTTCTCTTCAATCATGTAC+GGG | + | chr8_3:7861603-7861622 | Msa1274060:intron | 35.0% | |
TTCTTATCACAGGTTCAAGT+TGG | + | chr8_3:7861716-7861735 | Msa1274060:intron | 35.0% | |
AACAGAGAAAAAACTTGGCA+AGG | + | chr8_3:7861757-7861776 | Msa1274060:CDS | 35.0% | |
ACAGAGAAAAAACTTGGCAA+GGG | + | chr8_3:7861758-7861777 | Msa1274060:CDS | 35.0% | |
! | GGATTTGGTCAAGTATATGT+TGG | + | chr8_3:7861782-7861801 | Msa1274060:CDS | 35.0% |
TTGGTCAAGTATATGTTGGT+CGG | + | chr8_3:7861786-7861805 | Msa1274060:CDS | 35.0% | |
TTTGAGCACACAAGTAGTAA+AGG | + | chr8_3:7861982-7862001 | Msa1274060:CDS | 35.0% | |
GTGCAGATTATGGATATTCT+AGG | + | chr8_3:7862367-7862386 | Msa1274060:intron | 35.0% | |
TTCCATTCATCATACAAGCT+AGG | - | chr8_3:7862394-7862413 | None:intergenic | 35.0% | |
AATACAAGCAACCATTTCAG+TGG | - | chr8_3:7862541-7862560 | None:intergenic | 35.0% | |
AGAAATGAACGGAAATTGAG+TGG | - | chr8_3:7862619-7862638 | None:intergenic | 35.0% | |
GCATAACCCAAAGAAATGAA+CGG | - | chr8_3:7862630-7862649 | None:intergenic | 35.0% | |
AGTGTCTATCCACTATTCAT+AGG | - | chr8_3:7862652-7862671 | None:intergenic | 35.0% | |
! | ATATGGTGATGTATATGGGT+AGG | + | chr8_3:7862795-7862814 | Msa1274060:intron | 35.0% |
CGATGAGAAAAAATTGTTCC+TGG | + | chr8_3:7862874-7862893 | Msa1274060:CDS | 35.0% | |
AAATTGTTCCTGGTAGATCT+TGG | + | chr8_3:7862884-7862903 | Msa1274060:CDS | 35.0% | |
!! | TGGCTTTTTCTGTGCAATTT+CGG | + | chr8_3:7862982-7863001 | Msa1274060:intron | 35.0% |
!! | ATAATTTTGGCCCGATAGTT+TGG | + | chr8_3:7863110-7863129 | Msa1274060:intron | 35.0% |
!! | TAATTTTGGCCCGATAGTTT+GGG | + | chr8_3:7863111-7863130 | Msa1274060:intron | 35.0% |
TCTACACAATCCCAAACTAT+CGG | - | chr8_3:7863124-7863143 | None:intergenic | 35.0% | |
! | TACTTAGACATTTTTCGCTC+AGG | + | chr8_3:7863388-7863407 | Msa1274060:intron | 35.0% |
! | ACTTAGACATTTTTCGCTCA+GGG | + | chr8_3:7863389-7863408 | Msa1274060:intron | 35.0% |
AAAATAGCAGTGTCAAAGGT+TGG | - | chr8_3:7863693-7863712 | None:intergenic | 35.0% | |
!! | AAGCTTGTTGGTCATAAAAG+AGG | + | chr8_3:7863724-7863743 | Msa1274060:intron | 35.0% |
! | GAGGTATTTGAGTAGTTAGT+AGG | - | chr8_3:7863910-7863929 | None:intergenic | 35.0% |
AGTGACTAAGTTTACTAGTG+AGG | - | chr8_3:7863929-7863948 | None:intergenic | 35.0% | |
ATTGACAAAGGAAATGAGGA+TGG | + | chr8_3:7864322-7864341 | Msa1274060:CDS | 35.0% | |
TACCTTATGGAAAAATTGGG+GGG | - | chr8_3:7864440-7864459 | None:intergenic | 35.0% | |
AATAAGCATGCCTTGAAACT+GGG | - | chr8_3:7864554-7864573 | None:intergenic | 35.0% | |
TAATAAGCATGCCTTGAAAC+TGG | - | chr8_3:7864555-7864574 | None:intergenic | 35.0% | |
!! | AATGGATTAGCAAAAAGTGG+AGG | + | chr8_3:7864845-7864864 | Msa1274060:CDS | 35.0% |
!! | ATGGATTAGCAAAAAGTGGA+GGG | + | chr8_3:7864846-7864865 | Msa1274060:CDS | 35.0% |
TAGTTATGTCTAAAGGGACA+GGG | + | chr8_3:7864917-7864936 | Msa1274060:CDS | 35.0% | |
! | GATTTTCTGTATCCTAGTGA+AGG | + | chr8_3:7865059-7865078 | Msa1274060:CDS | 35.0% |
ACGAAACTCAAGAAACACTA+AGG | + | chr8_3:7865183-7865202 | Msa1274060:CDS | 35.0% | |
! | ACTTGATTTTACAGGAGAAG+TGG | + | chr8_3:7865302-7865321 | Msa1274060:intron | 35.0% |
! | CTTGATTTTACAGGAGAAGT+GGG | + | chr8_3:7865303-7865322 | Msa1274060:intron | 35.0% |
! | TACATTGCCTCTATTTGCTA+CGG | + | chr8_3:7865337-7865356 | Msa1274060:CDS | 35.0% |
TAGCATGTCAAGAAGTTTGA+TGG | + | chr8_3:7865496-7865515 | Msa1274060:three_prime_UTR | 35.0% | |
AGCATGTCAAGAAGTTTGAT+GGG | + | chr8_3:7865497-7865516 | Msa1274060:three_prime_UTR | 35.0% | |
! | TAGTTAATGTTTTCCAGACG+AGG | + | chr8_3:7865651-7865670 | Msa1274060:three_prime_UTR | 35.0% |
GTATAAAAAAGTTCCTCGTC+TGG | - | chr8_3:7865667-7865686 | None:intergenic | 35.0% | |
!!! | GACGAGGAACTTTTTTATAC+AGG | + | chr8_3:7865667-7865686 | Msa1274060:three_prime_UTR | 35.0% |
! | GATGAGAGAGAGATGCTTTT+TGG | - | chr8_3:7859507-7859526 | None:intergenic | 40.0% |
!! | GGAATTTTAGCGTCGGAATT+AGG | - | chr8_3:7859593-7859612 | None:intergenic | 40.0% |
!! | GATGGAAGGAATTTTAGCGT+CGG | - | chr8_3:7859600-7859619 | None:intergenic | 40.0% |
!! | GAGAAATTGATGGTGATGGA+AGG | - | chr8_3:7859614-7859633 | None:intergenic | 40.0% |
! | TGGTTGATACACGAAAGTGA+AGG | - | chr8_3:7859647-7859666 | None:intergenic | 40.0% |
AGTACCATTCACTTCGATTG+AGG | + | chr8_3:7859698-7859717 | Msa1274060:five_prime_UTR | 40.0% | |
TTTCGATCGATGAACAATGC+CGG | + | chr8_3:7859774-7859793 | Msa1274060:exon | 40.0% | |
AGTGATAGAGGAGAAACAGA+TGG | + | chr8_3:7860029-7860048 | Msa1274060:CDS | 40.0% | |
ATGGAGGAATTTGATCGTTG+TGG | + | chr8_3:7860048-7860067 | Msa1274060:CDS | 40.0% | |
AGCAATGATAAGGCTAATGC+TGG | + | chr8_3:7860075-7860094 | Msa1274060:CDS | 40.0% | |
GCTGGTGAAGAAGATAGTAA+TGG | + | chr8_3:7860093-7860112 | Msa1274060:CDS | 40.0% | |
!! | TGAATTGGTGTTAGGGTTCA+AGG | + | chr8_3:7860226-7860245 | Msa1274060:intron | 40.0% |
!! | GAATTGGTGTTAGGGTTCAA+GGG | + | chr8_3:7860227-7860246 | Msa1274060:intron | 40.0% |
! | GTTCAAGGGCTTTCATGTTT+TGG | + | chr8_3:7860241-7860260 | Msa1274060:intron | 40.0% |
!!! | CATGTTTTGGTAGCTTGATG+GGG | + | chr8_3:7860254-7860273 | Msa1274060:intron | 40.0% |
!!! | ATGTTTTGGTAGCTTGATGG+GGG | + | chr8_3:7860255-7860274 | Msa1274060:intron | 40.0% |
AATCCCGAGTTAAATTCCAG+TGG | + | chr8_3:7860427-7860446 | Msa1274060:intron | 40.0% | |
CGAGTTAAATTCCAGTGGTT+TGG | + | chr8_3:7860432-7860451 | Msa1274060:intron | 40.0% | |
CAAATAAACACGCACATGGA+AGG | - | chr8_3:7860511-7860530 | None:intergenic | 40.0% | |
TAAGGAATTTGTGTCAGAGC+AGG | + | chr8_3:7860571-7860590 | Msa1274060:intron | 40.0% | |
! | CTTTGGAGGATCTAATTCAC+AGG | - | chr8_3:7860604-7860623 | None:intergenic | 40.0% |
! | AACAACTAGACTGACTTTGG+AGG | - | chr8_3:7860618-7860637 | None:intergenic | 40.0% |
ATGTTCACCATCCTCAAACT+AGG | - | chr8_3:7860660-7860679 | None:intergenic | 40.0% | |
! | ATGATTTGCCAGACAGGAAA+AGG | + | chr8_3:7860710-7860729 | Msa1274060:intron | 40.0% |
! | TGATTTGCCAGACAGGAAAA+GGG | + | chr8_3:7860711-7860730 | Msa1274060:intron | 40.0% |
! | CAGTTAGAGCTTTAACAGAC+TGG | - | chr8_3:7860743-7860762 | None:intergenic | 40.0% |
! | CAGTCTGTTAAAGCTCTAAC+TGG | + | chr8_3:7860741-7860760 | Msa1274060:CDS | 40.0% |
AATATGGCCATTATTGGTCC+CGG | - | chr8_3:7860775-7860794 | None:intergenic | 40.0% | |
! | TTACTCGCCGAATGTCATTT+CGG | - | chr8_3:7860902-7860921 | None:intergenic | 40.0% |
TATAAAGTGGGGGGAAATAG+GGG | - | chr8_3:7860996-7861015 | None:intergenic | 40.0% | |
GTGGAGACAAGTATTAGGTT+GGG | - | chr8_3:7861228-7861247 | None:intergenic | 40.0% | |
TGTGGAGACAAGTATTAGGT+TGG | - | chr8_3:7861229-7861248 | None:intergenic | 40.0% | |
CAAGTGTGGAGACAAGTATT+AGG | - | chr8_3:7861233-7861252 | None:intergenic | 40.0% | |
TGCTAACTATAGTGCAAGTG+TGG | - | chr8_3:7861247-7861266 | None:intergenic | 40.0% | |
ATCATGTACGGGCATAAGTA+TGG | + | chr8_3:7861614-7861633 | Msa1274060:intron | 40.0% | |
GACTTATAGATTAGGGCAAC+TGG | - | chr8_3:7861661-7861680 | None:intergenic | 40.0% | |
GGAAGTTTGAATGAGAGAAC+TGG | + | chr8_3:7861821-7861840 | Msa1274060:CDS | 40.0% | |
GTACGAGTGAGTGTTATCAT+CGG | + | chr8_3:7862038-7862057 | Msa1274060:intron | 40.0% | |
!! | TTTTATTTGTGCAGCACCCT+CGG | + | chr8_3:7862143-7862162 | Msa1274060:intron | 40.0% |
TTGCCTTTGTAATGTACCTG+TGG | - | chr8_3:7862185-7862204 | None:intergenic | 40.0% | |
CATTACAAAGGCAAGCAAGA+TGG | + | chr8_3:7862191-7862210 | Msa1274060:CDS | 40.0% | |
GCAAGATGGCTACTATATCA+TGG | + | chr8_3:7862205-7862224 | Msa1274060:CDS | 40.0% | |
! | GACCTAGCTTGTATGATGAA+TGG | + | chr8_3:7862389-7862408 | Msa1274060:CDS | 40.0% |
TTCCAGTATGTCCACTGAAA+TGG | + | chr8_3:7862527-7862546 | Msa1274060:intron | 40.0% | |
AACCATTTCAGTGGACATAC+TGG | - | chr8_3:7862532-7862551 | None:intergenic | 40.0% | |
AGAGTGCATCTTCTCCAATA+TGG | - | chr8_3:7862580-7862599 | None:intergenic | 40.0% | |
TGGGTTATGCCTATGAATAG+TGG | + | chr8_3:7862640-7862659 | Msa1274060:intron | 40.0% | |
TATATGGGTAGGTATGTGCA+TGG | + | chr8_3:7862806-7862825 | Msa1274060:intron | 40.0% | |
! | AAGCCGGAAAATTTTCTGCT+TGG | + | chr8_3:7862836-7862855 | Msa1274060:CDS | 40.0% |
TTCCTGGTAGATCTTGGATT+GGG | + | chr8_3:7862890-7862909 | Msa1274060:CDS | 40.0% | |
!! | GGCTTTTTCTGTGCAATTTC+GGG | + | chr8_3:7862983-7863002 | Msa1274060:intron | 40.0% |
!! | TAGTACAACTGGTTTGCAAG+TGG | + | chr8_3:7863029-7863048 | Msa1274060:CDS | 40.0% |
! | ACCAAAGGCCTGATATTTTC+AGG | + | chr8_3:7863058-7863077 | Msa1274060:CDS | 40.0% |
ACCTGAAAATATCAGGCCTT+TGG | - | chr8_3:7863062-7863081 | None:intergenic | 40.0% | |
CTACACAATCCCAAACTATC+GGG | - | chr8_3:7863123-7863142 | None:intergenic | 40.0% | |
TGCAAGTGTGCATTCACATT+TGG | + | chr8_3:7863221-7863240 | Msa1274060:CDS | 40.0% | |
GCAAGTGTGCATTCACATTT+GGG | + | chr8_3:7863222-7863241 | Msa1274060:CDS | 40.0% | |
CAAGTGTGCATTCACATTTG+GGG | + | chr8_3:7863223-7863242 | Msa1274060:CDS | 40.0% | |
CATTCACATTTGGGGAGAAA+TGG | + | chr8_3:7863231-7863250 | Msa1274060:CDS | 40.0% | |
!!! | ACACTGATTTTTCTTCTCCG+AGG | + | chr8_3:7863288-7863307 | Msa1274060:CDS | 40.0% |
GGGAGAAAACAAAGGATATC+AGG | + | chr8_3:7863409-7863428 | Msa1274060:intron | 40.0% | |
ACAAAGGATATCAGGTTTGC+AGG | + | chr8_3:7863417-7863436 | Msa1274060:CDS | 40.0% | |
CAAAAACAGCATAGGTTCTC+TGG | - | chr8_3:7863461-7863480 | None:intergenic | 40.0% | |
GGGCTCTTCATCATACTTTA+AGG | - | chr8_3:7863522-7863541 | None:intergenic | 40.0% | |
TCTCTCTTTGATGGGATTGT+TGG | + | chr8_3:7863560-7863579 | Msa1274060:CDS | 40.0% | |
TATTCAGTGGCCTAATGTCT+GGG | - | chr8_3:7863592-7863611 | None:intergenic | 40.0% | |
ATTAGGCCACTGAATACAGA+AGG | + | chr8_3:7863596-7863615 | Msa1274060:CDS | 40.0% | |
! | GAATACAGAAGGTGCACAAA+AGG | + | chr8_3:7863607-7863626 | Msa1274060:CDS | 40.0% |
!! | CATCATCTTCTGAAGCCAAT+CGG | - | chr8_3:7863750-7863769 | None:intergenic | 40.0% |
TGATGAACAGCCCAAAAAGA+AGG | + | chr8_3:7863768-7863787 | Msa1274060:CDS | 40.0% | |
CTCGTAGACCAATGAAACAA+AGG | + | chr8_3:7863836-7863855 | Msa1274060:CDS | 40.0% | |
! | TAGTTAGTAGGGTGTCTTAG+TGG | - | chr8_3:7863898-7863917 | None:intergenic | 40.0% |
GGATATGGAGGGTTAACTAA+AGG | - | chr8_3:7863967-7863986 | None:intergenic | 40.0% | |
TTAGTTAACCCTCCATATCC+TGG | + | chr8_3:7863967-7863986 | Msa1274060:intron | 40.0% | |
TAGTTAACCCTCCATATCCT+GGG | + | chr8_3:7863968-7863987 | Msa1274060:intron | 40.0% | |
ATTATGGCAAACCCAGGATA+TGG | - | chr8_3:7863982-7864001 | None:intergenic | 40.0% | |
! | CTTATTGGTGTATGATGGGA+AGG | - | chr8_3:7864026-7864045 | None:intergenic | 40.0% |
GTTAGATGCTTAGGGTTATC+CGG | + | chr8_3:7864197-7864216 | Msa1274060:intron | 40.0% | |
TTAGATGCTTAGGGTTATCC+GGG | + | chr8_3:7864198-7864217 | Msa1274060:intron | 40.0% | |
CTATCACAGCACATTGACAA+AGG | + | chr8_3:7864310-7864329 | Msa1274060:CDS | 40.0% | |
GCACATTGACAAAGGAAATG+AGG | + | chr8_3:7864318-7864337 | Msa1274060:CDS | 40.0% | |
TGTCCCTGCATCCATTATTA+AGG | - | chr8_3:7864389-7864408 | None:intergenic | 40.0% | |
!! | TTAATAATGGATGCAGGGAC+AGG | + | chr8_3:7864388-7864407 | Msa1274060:CDS | 40.0% |
GGGGGAGAATTCATAAACTT+GGG | - | chr8_3:7864422-7864441 | None:intergenic | 40.0% | |
ATATAGCTGGTGAGCTATAC+AGG | - | chr8_3:7864513-7864532 | None:intergenic | 40.0% | |
TACTATATCACTGCAGTTGC+AGG | + | chr8_3:7864645-7864664 | Msa1274060:CDS | 40.0% | |
CAGTTGCAGGAATTGCAAAT+GGG | + | chr8_3:7864658-7864677 | Msa1274060:CDS | 40.0% | |
TAAGTTAGCGGAGAGCAAAA+TGG | - | chr8_3:7864759-7864778 | None:intergenic | 40.0% | |
! | ATTTTGCTCTCCGCTAACTT+AGG | + | chr8_3:7864758-7864777 | Msa1274060:intron | 40.0% |
AAATCCATGGCCTAAGTTAG+CGG | - | chr8_3:7864771-7864790 | None:intergenic | 40.0% | |
TAACTTAGGCCATGGATTTC+AGG | + | chr8_3:7864772-7864791 | Msa1274060:intron | 40.0% | |
GACATAACTACTCCCCATTT+GGG | - | chr8_3:7864907-7864926 | None:intergenic | 40.0% | |
AGACATAACTACTCCCCATT+TGG | - | chr8_3:7864908-7864927 | None:intergenic | 40.0% | |
TGGGGAGTAGTTATGTCTAA+AGG | + | chr8_3:7864910-7864929 | Msa1274060:CDS | 40.0% | |
GGGGAGTAGTTATGTCTAAA+GGG | + | chr8_3:7864911-7864930 | Msa1274060:CDS | 40.0% | |
GTAGTTATGTCTAAAGGGAC+AGG | + | chr8_3:7864916-7864935 | Msa1274060:CDS | 40.0% | |
TACTCAGAACAAAAGCAGCT+TGG | - | chr8_3:7865142-7865161 | None:intergenic | 40.0% | |
TATTCCAGAGAATAAGCTGC+AGG | + | chr8_3:7865160-7865179 | Msa1274060:CDS | 40.0% | |
TCCTAGTACTCATGTTAAGG+TGG | + | chr8_3:7865217-7865236 | Msa1274060:intron | 40.0% | |
CCTAGTACTCATGTTAAGGT+GGG | + | chr8_3:7865218-7865237 | Msa1274060:intron | 40.0% | |
AGCAAATAGAGGCAATGTAG+AGG | - | chr8_3:7865336-7865355 | None:intergenic | 40.0% | |
TCTTCGGTCTAAACGTACAT+TGG | - | chr8_3:7865435-7865454 | None:intergenic | 40.0% | |
! | TGGGAGACAGGAAATTTTGA+TGG | + | chr8_3:7865521-7865540 | Msa1274060:three_prime_UTR | 40.0% |
TACGCCTCAATCGAAGTGAA+TGG | - | chr8_3:7859705-7859724 | None:intergenic | 45.0% | |
GGAAGAGGAGAAGAAAACTC+CGG | + | chr8_3:7859855-7859874 | Msa1274060:CDS | 45.0% | |
GAAGAAAACTCCGGTTGAAG+TGG | + | chr8_3:7859864-7859883 | Msa1274060:CDS | 45.0% | |
ACGTCATCATTTACCGCTAC+CGG | - | chr8_3:7859952-7859971 | None:intergenic | 45.0% | |
! | TGATGACGTAGCTGTTGTTG+TGG | + | chr8_3:7859963-7859982 | Msa1274060:CDS | 45.0% |
GATAGAGGAGAAACAGATGG+AGG | + | chr8_3:7860032-7860051 | Msa1274060:CDS | 45.0% | |
! | GCTTGTGGAGTGAGTTTTTG+TGG | + | chr8_3:7860384-7860403 | Msa1274060:intron | 45.0% |
TTGTGGTCCTAGTTTGAGGA+TGG | + | chr8_3:7860650-7860669 | Msa1274060:intron | 45.0% | |
! | GTTAGCATGATTTGCCAGAC+AGG | + | chr8_3:7860704-7860723 | Msa1274060:intron | 45.0% |
GCTCTAACTGGAGCTAATTC+CGG | + | chr8_3:7860753-7860772 | Msa1274060:CDS | 45.0% | |
CTCTAACTGGAGCTAATTCC+GGG | + | chr8_3:7860754-7860773 | Msa1274060:CDS | 45.0% | |
GCTAATTCCGGGACCAATAA+TGG | + | chr8_3:7860765-7860784 | Msa1274060:CDS | 45.0% | |
GAGAAAAAACTTGGCAAGGG+TGG | + | chr8_3:7861761-7861780 | Msa1274060:CDS | 45.0% | |
! | AAACTTGGCAAGGGTGGATT+TGG | + | chr8_3:7861767-7861786 | Msa1274060:CDS | 45.0% |
! | AACTGGACCTGAAGCTTTAG+AGG | + | chr8_3:7861838-7861857 | Msa1274060:CDS | 45.0% |
!! | GCACATACCTCTAAAGCTTC+AGG | - | chr8_3:7861848-7861867 | None:intergenic | 45.0% |
GTGCCACAGGTACATTACAA+AGG | + | chr8_3:7862179-7862198 | Msa1274060:CDS | 45.0% | |
GCTAATGTCAGCGGAAGAAT+AGG | - | chr8_3:7862706-7862725 | None:intergenic | 45.0% | |
! | GCGCCAAGCAGAAAATTTTC+CGG | - | chr8_3:7862842-7862861 | None:intergenic | 45.0% |
! | AAATTTTCTGCTTGGCGCCT+CGG | + | chr8_3:7862844-7862863 | Msa1274060:CDS | 45.0% |
GTTCCTGGTAGATCTTGGAT+TGG | + | chr8_3:7862889-7862908 | Msa1274060:CDS | 45.0% | |
TACCCAATCCAAGATCTACC+AGG | - | chr8_3:7862895-7862914 | None:intergenic | 45.0% | |
!! | TGCAAGTGGACTATGACCAA+AGG | + | chr8_3:7863043-7863062 | Msa1274060:CDS | 45.0% |
GTGAATGCACACTTGCATAG+CGG | - | chr8_3:7863218-7863237 | None:intergenic | 45.0% | |
ATTTGGGGAGAAATGGAAGC+AGG | + | chr8_3:7863238-7863257 | Msa1274060:CDS | 45.0% | |
TTCGCTCAGGGAGAAAACAA+AGG | + | chr8_3:7863401-7863420 | Msa1274060:intron | 45.0% | |
TCAGGTTTGCAGGAAGAAGA+TGG | + | chr8_3:7863427-7863446 | Msa1274060:CDS | 45.0% | |
CAGGTTTGCAGGAAGAAGAT+GGG | + | chr8_3:7863428-7863447 | Msa1274060:CDS | 45.0% | |
AAACAGCATAGGTTCTCTGG+AGG | - | chr8_3:7863458-7863477 | None:intergenic | 45.0% | |
GCTTGGGACAAAAACAGCAT+AGG | - | chr8_3:7863469-7863488 | None:intergenic | 45.0% | |
TTGGTCCAAACCCAGACATT+AGG | + | chr8_3:7863579-7863598 | Msa1274060:CDS | 45.0% | |
GTATTCAGTGGCCTAATGTC+TGG | - | chr8_3:7863593-7863612 | None:intergenic | 45.0% | |
TGTGCACCTTCTGTATTCAG+TGG | - | chr8_3:7863605-7863624 | None:intergenic | 45.0% | |
TGGTCATAAAAGAGGCCGAT+TGG | + | chr8_3:7863732-7863751 | Msa1274060:CDS | 45.0% | |
! | CCCACTCGAACCTTCTTTTT+GGG | - | chr8_3:7863781-7863800 | None:intergenic | 45.0% |
CCCAAAAAGAAGGTTCGAGT+GGG | + | chr8_3:7863778-7863797 | Msa1274060:CDS | 45.0% | |
! | ACCCACTCGAACCTTCTTTT+TGG | - | chr8_3:7863782-7863801 | None:intergenic | 45.0% |
!! | ACACTAATCCATTGGTTCGC+TGG | - | chr8_3:7863808-7863827 | None:intergenic | 45.0% |
!! | AAGGGTATTATGGCAAACCC+AGG | - | chr8_3:7863988-7864007 | None:intergenic | 45.0% |
!! | TAGCAGTGTTGCTTCATCTC+AGG | + | chr8_3:7864354-7864373 | Msa1274060:CDS | 45.0% |
!! | AGCAGTGTTGCTTCATCTCA+GGG | + | chr8_3:7864355-7864374 | Msa1274060:CDS | 45.0% |
CATCCATTATTAAGGCCCAC+AGG | - | chr8_3:7864381-7864400 | None:intergenic | 45.0% | |
!! | TGGGCCTTAATAATGGATGC+AGG | + | chr8_3:7864382-7864401 | Msa1274060:CDS | 45.0% |
!! | GGGCCTTAATAATGGATGCA+GGG | + | chr8_3:7864383-7864402 | Msa1274060:CDS | 45.0% |
GGGGGGAGAATTCATAAACT+TGG | - | chr8_3:7864423-7864442 | None:intergenic | 45.0% | |
! | CTCCCCCCAATTTTTCCATA+AGG | + | chr8_3:7864435-7864454 | Msa1274060:CDS | 45.0% |
GCAGTTGCAGGAATTGCAAA+TGG | + | chr8_3:7864657-7864676 | Msa1274060:CDS | 45.0% | |
GTATGATTGCTGCGCATACT+GGG | - | chr8_3:7864800-7864819 | None:intergenic | 45.0% | |
TGTATGATTGCTGCGCATAC+TGG | - | chr8_3:7864801-7864820 | None:intergenic | 45.0% | |
TAACTTCAATGGCCACAGCA+GGG | + | chr8_3:7864881-7864900 | Msa1274060:CDS | 45.0% | |
! | AGGGACAGGGTTTTCAAAAC+AGG | + | chr8_3:7864930-7864949 | Msa1274060:CDS | 45.0% |
CTAGTGAAGGGATTCACAAG+CGG | + | chr8_3:7865072-7865091 | Msa1274060:CDS | 45.0% | |
TTGCAGCAGTCGATGTGATT+CGG | - | chr8_3:7865112-7865131 | None:intergenic | 45.0% | |
CCCACCTTAACATGAGTACT+AGG | - | chr8_3:7865221-7865240 | None:intergenic | 45.0% | |
! | GGATTGGCAGTCTCAAGAAA+CGG | - | chr8_3:7865368-7865387 | None:intergenic | 45.0% |
TTCTTGAGACTGCCAATCCA+TGG | + | chr8_3:7865369-7865388 | Msa1274060:exon | 45.0% | |
! | TGTCAAGAAGTTTGATGGGC+TGG | + | chr8_3:7865501-7865520 | Msa1274060:three_prime_UTR | 45.0% |
!! | GTCAAGAAGTTTGATGGGCT+GGG | + | chr8_3:7865502-7865521 | Msa1274060:three_prime_UTR | 45.0% |
!! | AATATCAAAATAAAAAATTA+AGG | + | chr8_3:7860553-7860572 | Msa1274060:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTTTGA+AGG | + | chr8_3:7864593-7864612 | Msa1274060:intron | 5.0% |
ACAATGCCGGTAATGCGTAG+TGG | + | chr8_3:7859787-7859806 | Msa1274060:exon | 50.0% | |
! | TTCTGTGACTGTCGCTTCGT+TGG | - | chr8_3:7859829-7859848 | None:intergenic | 50.0% |
GTCACAGAAGAAGCAGGAAG+AGG | + | chr8_3:7859840-7859859 | Msa1274060:CDS | 50.0% | |
GAAAACTCCGGTTGAAGTGG+AGG | + | chr8_3:7859867-7859886 | Msa1274060:CDS | 50.0% | |
TTCCTCCTCCTTCTCCTCTA+CGG | - | chr8_3:7859989-7860008 | None:intergenic | 50.0% | |
AGCGGAGAAGGAAGTGATAG+AGG | + | chr8_3:7860017-7860036 | Msa1274060:CDS | 50.0% | |
! | ATTCCAGTGGTTTGGCTACG+AGG | + | chr8_3:7860440-7860459 | Msa1274060:intron | 50.0% |
! | GGCTACGAGGACATTTTACG+TGG | + | chr8_3:7860453-7860472 | Msa1274060:intron | 50.0% |
CCTCAAACTAGGACCACAAC+AGG | - | chr8_3:7860649-7860668 | None:intergenic | 50.0% | |
CCTGTTGTGGTCCTAGTTTG+AGG | + | chr8_3:7860646-7860665 | Msa1274060:intron | 50.0% | |
GAGGATGGTGAACATGCCAT+TGG | + | chr8_3:7860665-7860684 | Msa1274060:intron | 50.0% | |
GGGAATATGACTTATCCGGC+AGG | + | chr8_3:7860802-7860821 | Msa1274060:CDS | 50.0% | |
TACGCTTTCCACTCTTCTGG+CGG | - | chr8_3:7862021-7862040 | None:intergenic | 50.0% | |
TCGTACGCTTTCCACTCTTC+TGG | - | chr8_3:7862024-7862043 | None:intergenic | 50.0% | |
TTGGAGAAGATGCACTCTCG+AGG | + | chr8_3:7862582-7862601 | Msa1274060:CDS | 50.0% | |
TGGAGAAGATGCACTCTCGA+GGG | + | chr8_3:7862583-7862602 | Msa1274060:CDS | 50.0% | |
TGTGCATGGAGATGTGAAGC+CGG | + | chr8_3:7862820-7862839 | Msa1274060:CDS | 50.0% | |
! | AATTTTCTGCTTGGCGCCTC+GGG | + | chr8_3:7862845-7862864 | Msa1274060:CDS | 50.0% |
TCGGGATTGCAGCTACTGAA+TGG | + | chr8_3:7863001-7863020 | Msa1274060:intron | 50.0% | |
GGATTGCAGCTACTGAATGG+CGG | + | chr8_3:7863004-7863023 | Msa1274060:intron | 50.0% | |
GATTGCAGCTACTGAATGGC+GGG | + | chr8_3:7863005-7863024 | Msa1274060:intron | 50.0% | |
! | GAATGGCGGGATAGTACAAC+TGG | + | chr8_3:7863018-7863037 | Msa1274060:CDS | 50.0% |
TGGAAGCAGGAGGGATGATT+TGG | + | chr8_3:7863251-7863270 | Msa1274060:CDS | 50.0% | |
TCTTCCTTGGCAAGGATACC+AGG | + | chr8_3:7863314-7863333 | Msa1274060:CDS | 50.0% | |
AGTGGCCTAATGTCTGGGTT+TGG | - | chr8_3:7863587-7863606 | None:intergenic | 50.0% | |
GCCCAAAAAGAAGGTTCGAG+TGG | + | chr8_3:7863777-7863796 | Msa1274060:CDS | 50.0% | |
TGGGTTTACCAGCGAACCAA+TGG | + | chr8_3:7863797-7863816 | Msa1274060:CDS | 50.0% | |
TGGCAAACCCAGGATATGGA+GGG | - | chr8_3:7863978-7863997 | None:intergenic | 50.0% | |
ATGGCAAACCCAGGATATGG+AGG | - | chr8_3:7863979-7863998 | None:intergenic | 50.0% | |
AGGAATGGATCATGGAGCAG+TGG | + | chr8_3:7864613-7864632 | Msa1274060:intron | 50.0% | |
GGAATGGATCATGGAGCAGT+GGG | + | chr8_3:7864614-7864633 | Msa1274060:intron | 50.0% | |
TACTGGGTGCCTGAAATCCA+TGG | - | chr8_3:7864784-7864803 | None:intergenic | 50.0% | |
GTAACTTCAATGGCCACAGC+AGG | + | chr8_3:7864880-7864899 | Msa1274060:CDS | 50.0% | |
CGCTTGTGAATCCCTTCACT+AGG | - | chr8_3:7865074-7865093 | None:intergenic | 50.0% | |
TGAAGGGATTCACAAGCGGT+GGG | + | chr8_3:7865076-7865095 | Msa1274060:CDS | 50.0% | |
! | TCACATCGACTGCTGCAACT+TGG | + | chr8_3:7865114-7865133 | Msa1274060:CDS | 50.0% |
! | CACATCGACTGCTGCAACTT+GGG | + | chr8_3:7865115-7865134 | Msa1274060:CDS | 50.0% |
TCGTCCTGCAGCTTATTCTC+TGG | - | chr8_3:7865167-7865186 | None:intergenic | 50.0% | |
GGTACGTCCGTAGCAAATAG+AGG | - | chr8_3:7865347-7865366 | None:intergenic | 50.0% | |
TTGAGACTGCCAATCCATGG+AGG | + | chr8_3:7865372-7865391 | Msa1274060:exon | 50.0% | |
TGAGACTGCCAATCCATGGA+GGG | + | chr8_3:7865373-7865392 | Msa1274060:exon | 50.0% | |
GCGACAGTCACAGAAGAAGC+AGG | + | chr8_3:7859834-7859853 | Msa1274060:CDS | 55.0% | |
AACTCCGGTTGAAGTGGAGG+CGG | + | chr8_3:7859870-7859889 | Msa1274060:CDS | 55.0% | |
CGGTTGCGACGAGAACAAGA+CGG | + | chr8_3:7859890-7859909 | Msa1274060:CDS | 55.0% | |
TTGCGACGAGAACAAGACGG+CGG | + | chr8_3:7859893-7859912 | Msa1274060:CDS | 55.0% | |
AGCTGTTGTTGTGGCCGTAG+AGG | + | chr8_3:7859972-7859991 | Msa1274060:CDS | 55.0% | |
TGTTGTGGCCGTAGAGGAGA+AGG | + | chr8_3:7859978-7859997 | Msa1274060:CDS | 55.0% | |
AGAGGAGAAGGAGGAGGAAG+CGG | + | chr8_3:7859990-7860009 | Msa1274060:CDS | 55.0% | |
TGTCCTCGTAGCCAAACCAC+TGG | - | chr8_3:7860446-7860465 | None:intergenic | 55.0% | |
ACGCACATGGAAGGGAAGTG+TGG | - | chr8_3:7860502-7860521 | None:intergenic | 55.0% | |
!! | GGAGTGTCCCTTTTCCTGTC+TGG | - | chr8_3:7860721-7860740 | None:intergenic | 55.0% |
TGGCTCAAGACAACACCTGC+CGG | - | chr8_3:7860820-7860839 | None:intergenic | 55.0% | |
! | GTTGGTCGGCGTGTTTCTGA+TGG | + | chr8_3:7861800-7861819 | Msa1274060:CDS | 55.0% |
ACAAAGGACCGCCAGAAGAG+TGG | + | chr8_3:7862010-7862029 | Msa1274060:CDS | 55.0% | |
TATTTGTGCAGCACCCTCGG+TGG | + | chr8_3:7862146-7862165 | Msa1274060:intron | 55.0% | |
CACACCATGACTTCCACCGA+GGG | - | chr8_3:7862162-7862181 | None:intergenic | 55.0% | |
TGGAAGTCATGGTGTGCCAC+AGG | + | chr8_3:7862166-7862185 | Msa1274060:CDS | 55.0% | |
! | ATTTTCTGCTTGGCGCCTCG+GGG | + | chr8_3:7862846-7862865 | Msa1274060:CDS | 55.0% |
TGGGGAGAAATGGAAGCAGG+AGG | + | chr8_3:7863241-7863260 | Msa1274060:CDS | 55.0% | |
GGGGAGAAATGGAAGCAGGA+GGG | + | chr8_3:7863242-7863261 | Msa1274060:CDS | 55.0% | |
TTCTCCGAGGTCGTCTTCCT+TGG | + | chr8_3:7863301-7863320 | Msa1274060:CDS | 55.0% | |
CTTGCCAAGGAAGACGACCT+CGG | - | chr8_3:7863308-7863327 | None:intergenic | 55.0% | |
CGAACCTGGTATCCTTGCCA+AGG | - | chr8_3:7863321-7863340 | None:intergenic | 55.0% | |
TTGCTTCATCTCAGGGCCTG+TGG | + | chr8_3:7864362-7864381 | Msa1274060:CDS | 55.0% | |
TGCTTCATCTCAGGGCCTGT+GGG | + | chr8_3:7864363-7864382 | Msa1274060:CDS | 55.0% | |
GGGCCTGTGGGCCTTAATAA+TGG | + | chr8_3:7864375-7864394 | Msa1274060:CDS | 55.0% | |
CTCTCCGCTAACTTAGGCCA+TGG | + | chr8_3:7864764-7864783 | Msa1274060:intron | 55.0% | |
GTGAAGGGATTCACAAGCGG+TGG | + | chr8_3:7865075-7865094 | Msa1274060:CDS | 55.0% | |
ATTCACAAGCGGTGGGAGTC+TGG | + | chr8_3:7865083-7865102 | Msa1274060:CDS | 55.0% | |
GAGACTGCCAATCCATGGAG+GGG | + | chr8_3:7865374-7865393 | Msa1274060:exon | 55.0% | |
ATACTCCTTCAGCCCCTCCA+TGG | - | chr8_3:7865389-7865408 | None:intergenic | 55.0% | |
!! | AGTTTGATGGGCTGGGAGAC+AGG | + | chr8_3:7865509-7865528 | Msa1274060:three_prime_UTR | 55.0% |
CGCGCTCCACTACGCATTAC+CGG | - | chr8_3:7859796-7859815 | None:intergenic | 60.0% | |
! | TAATGCGTAGTGGAGCGCGC+CGG | + | chr8_3:7859797-7859816 | Msa1274060:CDS | 60.0% |
GCAACCGCCTCCACTTCAAC+CGG | - | chr8_3:7859877-7859896 | None:intergenic | 60.0% | |
GGTTGAAGAGGAGCCGGTAG+CGG | + | chr8_3:7859936-7859955 | Msa1274060:CDS | 60.0% | |
TGTGGCCGTAGAGGAGAAGG+AGG | + | chr8_3:7859981-7860000 | Msa1274060:CDS | 60.0% | |
GAGGAGAAGGAGGAGGAAGC+GGG | + | chr8_3:7859991-7860010 | Msa1274060:CDS | 60.0% | |
AGCACCCTCGGTGGAAGTCA+TGG | + | chr8_3:7862155-7862174 | Msa1274060:intron | 60.0% | |
GCACACCATGACTTCCACCG+AGG | - | chr8_3:7862163-7862182 | None:intergenic | 60.0% | |
TTTCTCATCGGGTGTCCCCG+AGG | - | chr8_3:7862864-7862883 | None:intergenic | 60.0% | |
CGAGGTCGTCTTCCTTGGCA+AGG | + | chr8_3:7863306-7863325 | Msa1274060:CDS | 60.0% | |
CCTTCAGCCCCTCCATGGAT+TGG | - | chr8_3:7865384-7865403 | None:intergenic | 60.0% | |
CCAATCCATGGAGGGGCTGA+AGG | + | chr8_3:7865381-7865400 | Msa1274060:three_prime_UTR | 60.0% | |
! | AATGCGTAGTGGAGCGCGCC+GGG | + | chr8_3:7859798-7859817 | Msa1274060:CDS | 65.0% |
GGCCGTAGAGGAGAAGGAGG+AGG | + | chr8_3:7859984-7860003 | Msa1274060:CDS | 65.0% | |
GAGAAGGAGGAGGAAGCGGG+TGG | + | chr8_3:7859994-7860013 | Msa1274060:CDS | 65.0% | |
TGGCCACAGCAGGGCCCAAA+TGG | + | chr8_3:7864890-7864909 | Msa1274060:CDS | 65.0% | |
GGCCACAGCAGGGCCCAAAT+GGG | + | chr8_3:7864891-7864910 | Msa1274060:CDS | 65.0% | |
GCCACAGCAGGGCCCAAATG+GGG | + | chr8_3:7864892-7864911 | Msa1274060:CDS | 65.0% | |
TCCCCATTTGGGCCCTGCTG+TGG | - | chr8_3:7864896-7864915 | None:intergenic | 65.0% | |
! | ATGCGTAGTGGAGCGCGCCG+GGG | + | chr8_3:7859799-7859818 | Msa1274060:CDS | 70.0% |
GTCGCTTCGTTGGCCGTCCC+CGG | - | chr8_3:7859819-7859838 | None:intergenic | 70.0% | |
AAGACGGCGGCGTGCAGCTG+CGG | + | chr8_3:7859906-7859925 | Msa1274060:CDS | 70.0% | |
GGCGGCGGTTGAAGAGGAGC+CGG | + | chr8_3:7859930-7859949 | Msa1274060:CDS | 70.0% | |
GGAGGAGGAAGCGGGTGGAG+CGG | + | chr8_3:7859999-7860018 | Msa1274060:CDS | 70.0% | |
GGAAGCGGGTGGAGCGGAGA+AGG | + | chr8_3:7860005-7860024 | Msa1274060:CDS | 70.0% | |
! | GTAGTGGAGCGCGCCGGGGA+CGG | + | chr8_3:7859803-7859822 | Msa1274060:CDS | 75.0% |
TGCGGCGGCGGCGGTTGAAG+AGG | + | chr8_3:7859924-7859943 | Msa1274060:CDS | 75.0% | |
! | ACGGCGGCGTGCAGCTGCGG+CGG | + | chr8_3:7859909-7859928 | Msa1274060:CDS | 80.0% |
! | GCGGCGTGCAGCTGCGGCGG+CGG | + | chr8_3:7859912-7859931 | Msa1274060:CDS | 85.0% |
! | GCGTGCAGCTGCGGCGGCGG+CGG | + | chr8_3:7859915-7859934 | Msa1274060:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 7859498 | 7865820 | 7859498 | ID=Msa1274060;Name=Msa1274060 |
chr8_3 | mRNA | 7859498 | 7865820 | 7859498 | ID=Msa1274060-mRNA-1;Parent=Msa1274060;Name=Msa1274060-mRNA-1;_AED=0.11;_eAED=0.11;_QI=292|0.87|0.94|0.94|1|1|17|445|751 |
chr8_3 | exon | 7859498 | 7860134 | 7859498 | ID=Msa1274060-mRNA-1:exon:3069;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7860726 | 7860917 | 7860726 | ID=Msa1274060-mRNA-1:exon:3070;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7861728 | 7861859 | 7861728 | ID=Msa1274060-mRNA-1:exon:3071;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7861970 | 7862043 | 7861970 | ID=Msa1274060-mRNA-1:exon:3072;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7862157 | 7862226 | 7862157 | ID=Msa1274060-mRNA-1:exon:3073;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7862373 | 7862428 | 7862373 | ID=Msa1274060-mRNA-1:exon:3074;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7862533 | 7862604 | 7862533 | ID=Msa1274060-mRNA-1:exon:3075;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7862817 | 7862911 | 7862817 | ID=Msa1274060-mRNA-1:exon:3076;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7863013 | 7863079 | 7863013 | ID=Msa1274060-mRNA-1:exon:3077;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7863206 | 7863335 | 7863206 | ID=Msa1274060-mRNA-1:exon:3078;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7863410 | 7863628 | 7863410 | ID=Msa1274060-mRNA-1:exon:3079;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7863727 | 7863857 | 7863727 | ID=Msa1274060-mRNA-1:exon:3080;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7864282 | 7864456 | 7864282 | ID=Msa1274060-mRNA-1:exon:3081;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7864615 | 7864705 | 7864615 | ID=Msa1274060-mRNA-1:exon:3082;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7864794 | 7864951 | 7864794 | ID=Msa1274060-mRNA-1:exon:3083;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7865047 | 7865235 | 7865047 | ID=Msa1274060-mRNA-1:exon:3084;Parent=Msa1274060-mRNA-1 |
chr8_3 | exon | 7865316 | 7865820 | 7865316 | ID=Msa1274060-mRNA-1:exon:3085;Parent=Msa1274060-mRNA-1 |
chr8_3 | five_prime_UTR | 7859498 | 7859789 | 7859498 | ID=Msa1274060-mRNA-1:five_prime_utr;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7859790 | 7860134 | 7859790 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7860726 | 7860917 | 7860726 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7861728 | 7861859 | 7861728 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7861970 | 7862043 | 7861970 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7862157 | 7862226 | 7862157 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7862373 | 7862428 | 7862373 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7862533 | 7862604 | 7862533 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7862817 | 7862911 | 7862817 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7863013 | 7863079 | 7863013 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7863206 | 7863335 | 7863206 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7863410 | 7863628 | 7863410 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7863727 | 7863857 | 7863727 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7864282 | 7864456 | 7864282 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7864615 | 7864705 | 7864615 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7864794 | 7864951 | 7864794 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7865047 | 7865235 | 7865047 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | CDS | 7865316 | 7865375 | 7865316 | ID=Msa1274060-mRNA-1:cds;Parent=Msa1274060-mRNA-1 |
chr8_3 | three_prime_UTR | 7865376 | 7865820 | 7865376 | ID=Msa1274060-mRNA-1:three_prime_utr;Parent=Msa1274060-mRNA-1 |
Gene Sequence |
Protein sequence |