Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256270 | KEH38736.1 | 93.682 | 918 | 55 | 2 | 1 | 918 | 1 | 915 | 0.0 | 1650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256270 | A0A072VAU6 | 93.682 | 918 | 55 | 2 | 1 | 918 | 1 | 915 | 0.0 | 1650 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042410 | Msa0256270 | 0.805567 | 1.254382e-49 | -8.615850e-47 |
| Msa0088550 | Msa0256270 | 0.835045 | 2.108354e-56 | -8.615850e-47 |
| Msa0135360 | Msa0256270 | 0.831777 | 1.376809e-55 | -8.615850e-47 |
| Msa0135630 | Msa0256270 | 0.807104 | 5.948965e-50 | -8.615850e-47 |
| Msa0153440 | Msa0256270 | 0.824059 | 9.908426e-54 | -8.615850e-47 |
| Msa0179860 | Msa0256270 | 0.813254 | 2.808986e-51 | -8.615850e-47 |
| Msa0180290 | Msa0256270 | 0.804870 | 1.755205e-49 | -8.615850e-47 |
| Msa0201390 | Msa0256270 | 0.812883 | 3.388147e-51 | -8.615850e-47 |
| Msa0203070 | Msa0256270 | 0.820817 | 5.611766e-53 | -8.615850e-47 |
| Msa0211670 | Msa0256270 | 0.834519 | 2.859439e-56 | -8.615850e-47 |
| Msa0216050 | Msa0256270 | 0.860308 | 2.261426e-63 | -8.615850e-47 |
| Msa0243940 | Msa0256270 | 0.841344 | 5.029289e-58 | -8.615850e-47 |
| Msa0254190 | Msa0256270 | 0.820932 | 5.282712e-53 | -8.615850e-47 |
| Msa0256270 | Msa0389050 | 0.804639 | 1.961182e-49 | -8.615850e-47 |
| Msa0256270 | Msa0418960 | 0.807176 | 5.743645e-50 | -8.615850e-47 |
| Msa0256270 | Msa0437330 | 0.807833 | 4.167219e-50 | -8.615850e-47 |
| Msa0256270 | Msa0439700 | 0.813324 | 2.711974e-51 | -8.615850e-47 |
| Msa0256270 | Msa0607180 | 0.821831 | 3.274759e-53 | -8.615850e-47 |
| Msa0256270 | Msa0618430 | 0.819488 | 1.131385e-52 | -8.615850e-47 |
| Msa0256270 | Msa0647360 | 0.811516 | 6.731435e-51 | -8.615850e-47 |
| Msa0256270 | Msa0672810 | 0.805484 | 1.305793e-49 | -8.615850e-47 |
| Msa0256270 | Msa0672850 | 0.823498 | 1.340871e-53 | -8.615850e-47 |
| Msa0256270 | Msa0752580 | 0.823802 | 1.138672e-53 | -8.615850e-47 |
| Msa0256270 | Msa0754500 | 0.816990 | 4.159082e-52 | -8.615850e-47 |
| Msa0256270 | Msa0830900 | 0.804583 | 2.015351e-49 | -8.615850e-47 |
| Msa0256270 | Msa0883350 | 0.806719 | 7.177417e-50 | -8.615850e-47 |
| Msa0256270 | Msa0883660 | 0.806820 | 6.832353e-50 | -8.615850e-47 |
| Msa0256270 | Msa0886660 | 0.810495 | 1.120633e-50 | -8.615850e-47 |
| Msa0256270 | Msa0902980 | 0.810795 | 9.650212e-51 | -8.615850e-47 |
| Msa0256270 | Msa0946680 | 0.843928 | 1.036064e-58 | -8.615850e-47 |
| Msa0256270 | Msa1008340 | 0.814609 | 1.411857e-51 | -8.615850e-47 |
| Msa0256270 | Msa1029090 | 0.826196 | 3.097117e-54 | -8.615850e-47 |
| Msa0256270 | Msa1037580 | 0.800505 | 1.396896e-48 | -8.615850e-47 |
| Msa0256270 | Msa1044090 | 0.809054 | 2.286548e-50 | -8.615850e-47 |
| Msa0256270 | Msa1048600 | 0.815171 | 1.059646e-51 | -8.615850e-47 |
| Msa0256270 | Msa1048620 | 0.808680 | 2.749046e-50 | -8.615850e-47 |
| Msa0256270 | Msa1050480 | 0.807339 | 5.305907e-50 | -8.615850e-47 |
| Msa0256270 | Msa1050500 | 0.826437 | 2.713550e-54 | -8.615850e-47 |
| Msa0256270 | Msa1121660 | 0.820951 | 5.229027e-53 | -8.615850e-47 |
| Msa0256270 | Msa1130350 | 0.836022 | 1.193883e-56 | -8.615850e-47 |
| Msa0256270 | Msa1130630 | 0.808741 | 2.668455e-50 | -8.615850e-47 |
| Msa0256270 | Msa1138450 | 0.810447 | 1.147274e-50 | -8.615850e-47 |
| Msa0256270 | Msa1138480 | 0.822150 | 2.762298e-53 | -8.615850e-47 |
| Msa0256270 | Msa1139240 | 0.826363 | 2.827065e-54 | -8.615850e-47 |
| Msa0256270 | Msa1156180 | 0.822025 | 2.952979e-53 | -8.615850e-47 |
| Msa0256270 | Msa1279850 | 0.802331 | 5.901615e-49 | -8.615850e-47 |
| Msa0256270 | Msa1427810 | 0.812515 | 4.077546e-51 | -8.615850e-47 |
| Msa0256270 | Msa1441200 | 0.827962 | 1.170950e-54 | -8.615850e-47 |
| Msa0256270 | Msa1459170 | 0.810470 | 1.134717e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256270 | MtrunA17_Chr2g0317651 | 91.721 | 918 | 56 | 3 | 1 | 918 | 1 | 898 | 0.0 | 1601 |
| Msa0256270 | MtrunA17_Chr2g0317661 | 61.687 | 830 | 266 | 17 | 1 | 804 | 5 | 808 | 0.0 | 905 |
| Msa0256270 | MtrunA17_Chr2g0282201 | 39.542 | 918 | 494 | 23 | 26 | 907 | 38 | 930 | 0.0 | 579 |
| Msa0256270 | MtrunA17_Chr4g0003961 | 30.361 | 415 | 249 | 13 | 499 | 888 | 612 | 1011 | 2.94e-41 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0256270 | AT4G21700.1 | 34.921 | 945 | 530 | 26 | 23 | 917 | 51 | 960 | 2.71e-164 | 505 |
| Msa0256270 | AT1G52780.1 | 25.443 | 621 | 378 | 24 | 321 | 885 | 419 | 1010 | 7.05e-45 | 176 |
Find 161 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTTGTTGGAGTTGTTTC+TGG | 0.106289 | 2_2:+50975383 | None:intergenic |
| CCCTCTTGTTGCTCCAAATT+TGG | 0.143102 | 2_2:+50974358 | None:intergenic |
| GTTTAACATGTCTTATTATT+TGG | 0.156784 | 2_2:-50973932 | Msa0256270:CDS |
| GGAAACATCATTAAAGAAAT+TGG | 0.176812 | 2_2:+50974921 | None:intergenic |
| GAAGAATAGGATTAGGGTTT+TGG | 0.219346 | 2_2:-50974628 | Msa0256270:CDS |
| AAAAGATAGGAGCTATATTA+AGG | 0.225281 | 2_2:-50973758 | Msa0256270:CDS |
| AAGTAAAGAGGATCGGATTC+TGG | 0.226096 | 2_2:+50973715 | None:intergenic |
| GTAGCATAGTTGGCCAAATT+TGG | 0.228475 | 2_2:-50974371 | Msa0256270:CDS |
| TTGGAACTTCCACTAATTAT+AGG | 0.235588 | 2_2:+50974702 | None:intergenic |
| CTATAACTATAATTTGCTTT+TGG | 0.237802 | 2_2:+50974900 | None:intergenic |
| TTGAGGCTAATGAGAATAAA+AGG | 0.241298 | 2_2:+50975441 | None:intergenic |
| TCTACTTCTCCTTCTGATTC+AGG | 0.242557 | 2_2:+50972776 | None:intergenic |
| CACATGCTTACGATCTTTAC+AGG | 0.250812 | 2_2:-50972997 | Msa0256270:CDS |
| TCATCAACATTGATGCTTCT+TGG | 0.268378 | 2_2:-50975298 | Msa0256270:CDS |
| TCTTTACTTCAAACGTTTAG+AGG | 0.271104 | 2_2:-50973701 | Msa0256270:CDS |
| AGCAAATTATAGTTATAGTT+TGG | 0.277090 | 2_2:-50974895 | Msa0256270:CDS |
| TATAATCATCATCATAGTTT+TGG | 0.289132 | 2_2:-50975164 | Msa0256270:CDS |
| AAAACATAGGTTGTGTTGTT+AGG | 0.295192 | 2_2:+50973439 | None:intergenic |
| AATACCAAAACTATGTTGAT+AGG | 0.297180 | 2_2:-50974549 | Msa0256270:CDS |
| GAGATGAAGGGAAGCACATT+AGG | 0.300140 | 2_2:+50973541 | None:intergenic |
| CTGAATGAATCAAAGTTTAA+TGG | 0.303797 | 2_2:+50974810 | None:intergenic |
| TTCAAGTAATATAACTAGTT+TGG | 0.303810 | 2_2:-50975003 | Msa0256270:CDS |
| TTCCCCTATCAACATAGTTT+TGG | 0.311817 | 2_2:+50974545 | None:intergenic |
| AAAAGGGCTTGTTTACATAT+TGG | 0.321294 | 2_2:+50972748 | None:intergenic |
| AACACCAACAGCAAATTCTT+TGG | 0.329524 | 2_2:-50973824 | Msa0256270:CDS |
| GTTGAAAACGAGTTCTCTTT+TGG | 0.330319 | 2_2:-50974861 | Msa0256270:CDS |
| CCAGTGTTGTGATCACTTAT+AGG | 0.335832 | 2_2:+50975344 | None:intergenic |
| GTTTCTTGATGGAAAGTATA+AGG | 0.339437 | 2_2:+50975265 | None:intergenic |
| TACTTAACCTTCAAGCTTGA+TGG | 0.343248 | 2_2:-50975140 | Msa0256270:CDS |
| GATTGAGATTCCCCTCAATT+TGG | 0.347728 | 2_2:-50974410 | Msa0256270:CDS |
| CATAAAATCTTATGGTGGTT+TGG | 0.357544 | 2_2:-50973131 | Msa0256270:CDS |
| GTTGCATATGTGTTTCTTGA+TGG | 0.358343 | 2_2:+50975254 | None:intergenic |
| ATAATATGAAGCATCATTGT+TGG | 0.361082 | 2_2:+50975184 | None:intergenic |
| TTATTATTTGGTGAAGATTT+CGG | 0.361226 | 2_2:-50973920 | Msa0256270:CDS |
| CAGTGTTGTGATCACTTATA+GGG | 0.364678 | 2_2:+50975345 | None:intergenic |
| TCAGGAAATGTTTGCATGGT+TGG | 0.365878 | 2_2:-50975101 | Msa0256270:CDS |
| ATGGAAAGTATAAGGAGAAT+TGG | 0.368044 | 2_2:+50975273 | None:intergenic |
| ATCTTATGGTGGTTTGGTAT+TGG | 0.370141 | 2_2:-50973125 | Msa0256270:CDS |
| CTTCTTTAGATACAAAAGAT+AGG | 0.374932 | 2_2:-50973771 | Msa0256270:CDS |
| AAGAAGAGAGAAGAAATGTT+TGG | 0.375232 | 2_2:-50973654 | Msa0256270:CDS |
| ATGATGTCGATTCTCACATT+TGG | 0.392229 | 2_2:-50973511 | Msa0256270:CDS |
| TTGGGATATTATCATTCCTT+TGG | 0.393213 | 2_2:-50972900 | Msa0256270:CDS |
| GAGTTGAATTTCTTTGTTGT+TGG | 0.393757 | 2_2:+50975371 | None:intergenic |
| TGGGAGAACATAAAATCTTA+TGG | 0.395445 | 2_2:-50973139 | Msa0256270:CDS |
| AGCATCATTGTTGGTTCTAA+AGG | 0.396449 | 2_2:+50975193 | None:intergenic |
| AGGAATGATGATGCGAATTA+TGG | 0.398589 | 2_2:-50974300 | Msa0256270:CDS |
| TAGATTTGCTACCATTGAAA+TGG | 0.408296 | 2_2:+50974478 | None:intergenic |
| TTGTTGTTGGAGTTGTTTCT+GGG | 0.412287 | 2_2:+50975384 | None:intergenic |
| AACAAGGAATTCTTGTCAAA+AGG | 0.413713 | 2_2:+50973952 | None:intergenic |
| GAGAAGAAATGTTTGGAGAA+TGG | 0.414023 | 2_2:-50973647 | Msa0256270:CDS |
| AATTGCACTCCTATAATTAG+TGG | 0.415041 | 2_2:-50974711 | Msa0256270:CDS |
| AATATAACTAGTTTGGTTAG+TGG | 0.417955 | 2_2:-50974996 | Msa0256270:CDS |
| AAAGATAGGAGCTATATTAA+GGG | 0.423119 | 2_2:-50973757 | Msa0256270:CDS |
| AGATGAAGGGAAGCACATTA+GGG | 0.428757 | 2_2:+50973542 | None:intergenic |
| AAGTTAATGAAATAAGTGTT+AGG | 0.433944 | 2_2:-50973393 | Msa0256270:CDS |
| CATCATGAAAATTGAGATGA+AGG | 0.435480 | 2_2:+50973528 | None:intergenic |
| ATGTCATATGAATATGCATC+TGG | 0.440507 | 2_2:+50974177 | None:intergenic |
| TTCAACATTTCCTAAAACAT+AGG | 0.445636 | 2_2:+50973426 | None:intergenic |
| TGGAGTTGTTTCTGGGATGA+TGG | 0.447557 | 2_2:+50975391 | None:intergenic |
| CCCATGACGGATCATGTTGT+TGG | 0.448985 | 2_2:+50973158 | None:intergenic |
| GCCAAATTTGGAGCAACAAG+AGG | 0.452022 | 2_2:-50974359 | Msa0256270:CDS |
| ACCTTCCCTTTGTATGCTGT+CGG | 0.452141 | 2_2:-50973250 | Msa0256270:CDS |
| ACGAAAGCAAGAACAATCTC+TGG | 0.455404 | 2_2:-50973300 | Msa0256270:CDS |
| AGAGAGTTTGAGTTCTGAAA+AGG | 0.456424 | 2_2:-50974967 | Msa0256270:CDS |
| TGTTGATAGGGGAAGGATGG+TGG | 0.456878 | 2_2:-50974536 | Msa0256270:CDS |
| GTTAAAGAAGGATAGAGATT+CGG | 0.464514 | 2_2:-50973203 | Msa0256270:CDS |
| TGGACGACCAAGTTAGATAC+AGG | 0.464742 | 2_2:+50973332 | None:intergenic |
| TCAAGAAGTGAATTTGATGC+TGG | 0.466884 | 2_2:-50974048 | Msa0256270:CDS |
| CATATGTGATGGTAATTGAT+TGG | 0.467774 | 2_2:+50974683 | None:intergenic |
| ATACCAAAACTATGTTGATA+GGG | 0.467993 | 2_2:-50974548 | Msa0256270:CDS |
| ATCAAATTCACTTCTTGAGA+AGG | 0.474088 | 2_2:+50974053 | None:intergenic |
| TTTGATCCTTTGAATCTATG+AGG | 0.475611 | 2_2:+50972815 | None:intergenic |
| GTAGTTCTTTGCCATTTCAA+TGG | 0.476934 | 2_2:-50974489 | Msa0256270:CDS |
| GGAGTTTATGATTCAAGAGA+TGG | 0.479886 | 2_2:-50973892 | Msa0256270:CDS |
| GGAATCGTGAACAATGATAA+TGG | 0.480001 | 2_2:-50974027 | Msa0256270:CDS |
| TCTAAACGTTTGAAGTAAAG+AGG | 0.482986 | 2_2:+50973703 | None:intergenic |
| GATGGAACCTTGTGTATGAT+TGG | 0.483550 | 2_2:-50973874 | Msa0256270:CDS |
| ATTGCTGTTGAAGTTAAAGA+AGG | 0.484181 | 2_2:-50973215 | Msa0256270:CDS |
| AGTAAAGAGGATCGGATTCT+GGG | 0.485124 | 2_2:+50973716 | None:intergenic |
| ACTTCAAAACGATAACAGTT+AGG | 0.487221 | 2_2:-50974320 | Msa0256270:CDS |
| TTGGATCGGCATAGAAGTAT+AGG | 0.492421 | 2_2:+50972945 | None:intergenic |
| CCATCACATATGTCTTTGAA+AGG | 0.493040 | 2_2:-50974672 | Msa0256270:CDS |
| CTATGTTGATAGGGGAAGGA+TGG | 0.493721 | 2_2:-50974539 | Msa0256270:CDS |
| AGAAGTATAGGTCATTATCT+TGG | 0.499463 | 2_2:+50972957 | None:intergenic |
| TTCACTTCTTGAGAAGGAAA+CGG | 0.499973 | 2_2:+50974059 | None:intergenic |
| CATCACATATGTCTTTGAAA+GGG | 0.501788 | 2_2:-50974671 | Msa0256270:CDS |
| TAATGAGAATAAAAGGTTGA+AGG | 0.501964 | 2_2:+50975448 | None:intergenic |
| CATAGATTCAAAGGATCAAA+GGG | 0.508834 | 2_2:-50972812 | Msa0256270:CDS |
| AGGAAACGGAAGATGTAGAT+TGG | 0.511543 | 2_2:+50974073 | None:intergenic |
| TATGGTGGTTTGGTATTGGA+TGG | 0.513398 | 2_2:-50973121 | Msa0256270:CDS |
| AGGGCTTGTTTACATATTGG+TGG | 0.515837 | 2_2:+50972751 | None:intergenic |
| AATGGACATGGAAGTTATCA+TGG | 0.516707 | 2_2:-50973629 | Msa0256270:CDS |
| TGACATGAAATTTGATATGT+CGG | 0.517094 | 2_2:-50974160 | Msa0256270:CDS |
| TGGTAGCAAATCTACATCCT+TGG | 0.517238 | 2_2:-50974469 | Msa0256270:CDS |
| GATATTATCATTCCTTTGGT+AGG | 0.519992 | 2_2:-50972896 | Msa0256270:CDS |
| TTGTTGAGAACCAAGGGAAA+AGG | 0.520792 | 2_2:-50974203 | Msa0256270:CDS |
| CATTAGGGTTTCTCTTCACA+TGG | 0.524442 | 2_2:+50973557 | None:intergenic |
| GTTGATAGGGGAAGGATGGT+GGG | 0.524493 | 2_2:-50974535 | Msa0256270:CDS |
| ATTGATTAACTCTACCAAGT+TGG | 0.524619 | 2_2:+50974244 | None:intergenic |
| TCATAGATTCAAAGGATCAA+AGG | 0.525867 | 2_2:-50972813 | Msa0256270:CDS |
| AGCAAATCTACATCCTTGGA+TGG | 0.528221 | 2_2:-50974465 | Msa0256270:CDS |
| TACTCATCATCAACAAATGA+AGG | 0.529729 | 2_2:+50974096 | None:intergenic |
| ATCTTCAGGAAATGTTTGCA+TGG | 0.535353 | 2_2:-50975105 | Msa0256270:CDS |
| CCGTGACCTTGTGTCAAACA+AGG | 0.541599 | 2_2:-50973848 | Msa0256270:CDS |
| GTGTTCCCTTGTTTGACACA+AGG | 0.543475 | 2_2:+50973842 | None:intergenic |
| TTCTCAACAACTTTGTGTCG+TGG | 0.548134 | 2_2:+50974216 | None:intergenic |
| ATAATCCGACAGCATACAAA+GGG | 0.550306 | 2_2:+50973245 | None:intergenic |
| TCCGTCTCCTGTATCTAACT+TGG | 0.554874 | 2_2:-50973339 | Msa0256270:CDS |
| AGGTATGAATATAGCCAACT+TGG | 0.561427 | 2_2:-50974258 | Msa0256270:CDS |
| CCTTGTTTGACACAAGGTCA+CGG | 0.563302 | 2_2:+50973848 | None:intergenic |
| TTGGTGAAGATTTCGGCAGA+AGG | 0.566368 | 2_2:-50973913 | Msa0256270:CDS |
| AAAACTATGTTGATAGGGGA+AGG | 0.567626 | 2_2:-50974543 | Msa0256270:CDS |
| GTCAAAAGGCGAAGAAGACA+TGG | 0.571754 | 2_2:+50973966 | None:intergenic |
| CCAAATTTGGAGCAACAAGA+GGG | 0.573396 | 2_2:-50974358 | Msa0256270:CDS |
| GTTCTGCCTCATAGATTCAA+AGG | 0.574597 | 2_2:-50972821 | Msa0256270:CDS |
| GCTTCGAAATTGAGAACAAG+TGG | 0.574778 | 2_2:+50973478 | None:intergenic |
| ACTCATGAGTGTACTCTAGT+TGG | 0.574884 | 2_2:+50974748 | None:intergenic |
| GATGATGCGAATTATGGTGT+GGG | 0.575675 | 2_2:-50974294 | Msa0256270:CDS |
| CACAACACTGGTTACTACAT+AGG | 0.579831 | 2_2:-50975332 | Msa0256270:CDS |
| ACCAACAACATGATCCGTCA+TGG | 0.584585 | 2_2:-50973159 | Msa0256270:CDS |
| ACGTTTGAAGTAAAGAGGAT+CGG | 0.584769 | 2_2:+50973708 | None:intergenic |
| TAGTGATGATGATGAGGATG+AGG | 0.585316 | 2_2:-50974838 | Msa0256270:CDS |
| TTGGTAGACTTGGTACATTG+AGG | 0.586290 | 2_2:+50973177 | None:intergenic |
| GATCATGTTGTTGGTAGACT+TGG | 0.589452 | 2_2:+50973167 | None:intergenic |
| AAATGTTTGGAGAATGGACA+TGG | 0.592263 | 2_2:-50973641 | Msa0256270:CDS |
| ATCATCAACAAATGAAGGAG+AGG | 0.594337 | 2_2:+50974101 | None:intergenic |
| ATCATGAAAATTGAGATGAA+GGG | 0.595539 | 2_2:+50973529 | None:intergenic |
| AATAATCCGACAGCATACAA+AGG | 0.597844 | 2_2:+50973244 | None:intergenic |
| CACAAAGTTGTTGAGAACCA+AGG | 0.597900 | 2_2:-50974210 | Msa0256270:CDS |
| CAGTCCAAAGAATTTGCTGT+TGG | 0.600317 | 2_2:+50973820 | None:intergenic |
| TACCAAAACTATGTTGATAG+GGG | 0.601461 | 2_2:-50974547 | Msa0256270:CDS |
| TCCTTGGATGGGACTCATGT+TGG | 0.604490 | 2_2:-50974453 | Msa0256270:CDS |
| ATGATGCGAATTATGGTGTG+GGG | 0.605495 | 2_2:-50974293 | Msa0256270:CDS |
| CCTATAAGTGATCACAACAC+TGG | 0.606253 | 2_2:-50975344 | Msa0256270:CDS |
| GCAAAGGTGCCTGAATCAGA+AGG | 0.607537 | 2_2:-50972785 | Msa0256270:CDS |
| AACAAGTTCAGAATTACTTG+TGG | 0.608075 | 2_2:+50973088 | None:intergenic |
| ACATGCTTACGATCTTTACA+GGG | 0.611348 | 2_2:-50972996 | Msa0256270:CDS |
| AACACTGGTTACTACATAGG+AGG | 0.611864 | 2_2:-50975329 | Msa0256270:CDS |
| CCTTTCAAAGACATATGTGA+TGG | 0.614605 | 2_2:+50974672 | None:intergenic |
| CCAACAACATGATCCGTCAT+GGG | 0.615320 | 2_2:-50973158 | Msa0256270:CDS |
| ACCAACATGAGTCCCATCCA+AGG | 0.619005 | 2_2:+50974452 | None:intergenic |
| ACAAAGTTGTTGAGAACCAA+GGG | 0.619367 | 2_2:-50974209 | Msa0256270:CDS |
| GCAAATCTACATCCTTGGAT+GGG | 0.620508 | 2_2:-50974464 | Msa0256270:CDS |
| TGGAATAGGAATAATAGCCA+AGG | 0.625611 | 2_2:-50974576 | Msa0256270:CDS |
| AGGATCAAAGGGATATGCAA+AGG | 0.628643 | 2_2:-50972801 | Msa0256270:CDS |
| TGATGCGAATTATGGTGTGG+GGG | 0.633895 | 2_2:-50974292 | Msa0256270:CDS |
| TCCGACAGCATACAAAGGGA+AGG | 0.634652 | 2_2:+50973249 | None:intergenic |
| AAGTGTTAGGCTAATCAGCA+TGG | 0.635759 | 2_2:-50973380 | Msa0256270:CDS |
| GATGCGAATTATGGTGTGGG+GGG | 0.637941 | 2_2:-50974291 | Msa0256270:CDS |
| CTTCTAATAGCACTTGAGAG+AGG | 0.638727 | 2_2:+50974774 | None:intergenic |
| TGATGATGCGAATTATGGTG+TGG | 0.642288 | 2_2:-50974295 | Msa0256270:CDS |
| GAGAACATAAAATCTTATGG+TGG | 0.645989 | 2_2:-50973136 | Msa0256270:CDS |
| GCAAGTACAATACCTACCAA+AGG | 0.646564 | 2_2:+50972884 | None:intergenic |
| AGTGATGATGATGAGGATGA+GGG | 0.648880 | 2_2:-50974837 | Msa0256270:CDS |
| CTGTAAAGATCGTAAGCATG+TGG | 0.656477 | 2_2:+50972998 | None:intergenic |
| CGTGACCTTGTGTCAAACAA+GGG | 0.663371 | 2_2:-50973847 | Msa0256270:CDS |
| ACCAAGTTAGATACAGGAGA+CGG | 0.666053 | 2_2:+50973338 | None:intergenic |
| ATAATAAGACATGTTAAACA+AGG | 0.673949 | 2_2:+50973936 | None:intergenic |
| GCGAAGAAGACATGGCTGAG+AGG | 0.686145 | 2_2:+50973974 | None:intergenic |
| CAAACGTTTAGAGGTATCTG+CGG | 0.688357 | 2_2:-50973692 | Msa0256270:CDS |
| ACGGCAACCAATCATACACA+AGG | 0.708091 | 2_2:+50973867 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATCATCATCATAGTTT+TGG | - | chr2_2:50973090-50973109 | Msa0256270:CDS | 20.0% |
| !! | TTCAAGTAATATAACTAGTT+TGG | - | chr2_2:50973251-50973270 | Msa0256270:CDS | 20.0% |
| !!! | CTATAACTATAATTTGCTTT+TGG | + | chr2_2:50973357-50973376 | None:intergenic | 20.0% |
| !! | AGCAAATTATAGTTATAGTT+TGG | - | chr2_2:50973359-50973378 | Msa0256270:CDS | 20.0% |
| !! | AAAAAAGAAGAATAGGATTA+GGG | - | chr2_2:50973620-50973639 | Msa0256270:CDS | 20.0% |
| !! | ATAATAAGACATGTTAAACA+AGG | + | chr2_2:50974321-50974340 | None:intergenic | 20.0% |
| !!! | GTTTAACATGTCTTATTATT+TGG | - | chr2_2:50974322-50974341 | Msa0256270:CDS | 20.0% |
| !!! | TTATTATTTGGTGAAGATTT+CGG | - | chr2_2:50974334-50974353 | Msa0256270:CDS | 20.0% |
| !!! | TATCTTTTGTATCTAAAGAA+GGG | + | chr2_2:50974484-50974503 | None:intergenic | 20.0% |
| !!! | TTTTAGGAAATGTTGAAAAA+TGG | - | chr2_2:50974834-50974853 | Msa0256270:CDS | 20.0% |
| !! | AAGTTAATGAAATAAGTGTT+AGG | - | chr2_2:50974861-50974880 | Msa0256270:CDS | 20.0% |
| !!! | AATAAGTTGAGTAAAAATCT+TGG | + | chr2_2:50975336-50975355 | None:intergenic | 20.0% |
| !!! | AAGATTTTTACTCAACTTAT+TGG | - | chr2_2:50975335-50975354 | Msa0256270:CDS | 20.0% |
| !!! | AGATTTTTACTCAACTTATT+GGG | - | chr2_2:50975336-50975355 | Msa0256270:CDS | 20.0% |
| ! | TAATGAGAATAAAAGGTTGA+AGG | + | chr2_2:50972809-50972828 | None:intergenic | 25.0% |
| !! | TTCTTTGTAAGATGATTTTG+AGG | + | chr2_2:50972833-50972852 | None:intergenic | 25.0% |
| !! | ATAATATGAAGCATCATTGT+TGG | + | chr2_2:50973073-50973092 | None:intergenic | 25.0% |
| !! | AATATAACTAGTTTGGTTAG+TGG | - | chr2_2:50973258-50973277 | Msa0256270:CDS | 25.0% |
| ! | GGAAACATCATTAAAGAAAT+TGG | + | chr2_2:50973336-50973355 | None:intergenic | 25.0% |
| ! | CTGAATGAATCAAAGTTTAA+TGG | + | chr2_2:50973447-50973466 | None:intergenic | 25.0% |
| ! | GTTCTTCAAAAAAGAAGAAT+AGG | - | chr2_2:50973613-50973632 | Msa0256270:CDS | 25.0% |
| ! | CAAAAAAGAAGAATAGGATT+AGG | - | chr2_2:50973619-50973638 | Msa0256270:CDS | 25.0% |
| !!! | CGAATAGTTTTGATTACTAT+TGG | - | chr2_2:50973658-50973677 | Msa0256270:CDS | 25.0% |
| !!! | GTTTTGATTACTATTGGAAT+AGG | - | chr2_2:50973664-50973683 | Msa0256270:CDS | 25.0% |
| ! | AATACCAAAACTATGTTGAT+AGG | - | chr2_2:50973705-50973724 | Msa0256270:CDS | 25.0% |
| ! | ATACCAAAACTATGTTGATA+GGG | - | chr2_2:50973706-50973725 | Msa0256270:CDS | 25.0% |
| ! | AAAAATAGTAGTAGCATAGT+TGG | - | chr2_2:50973873-50973892 | Msa0256270:CDS | 25.0% |
| ! | TGACATGAAATTTGATATGT+CGG | - | chr2_2:50974094-50974113 | Msa0256270:CDS | 25.0% |
| !! | CTATCTTTTGTATCTAAAGA+AGG | + | chr2_2:50974485-50974504 | None:intergenic | 25.0% |
| ! | CTTCTTTAGATACAAAAGAT+AGG | - | chr2_2:50974483-50974502 | Msa0256270:CDS | 25.0% |
| ! | AAAAGATAGGAGCTATATTA+AGG | - | chr2_2:50974496-50974515 | Msa0256270:CDS | 25.0% |
| ! | AAAGATAGGAGCTATATTAA+GGG | - | chr2_2:50974497-50974516 | Msa0256270:CDS | 25.0% |
| ! | ATCATGAAAATTGAGATGAA+GGG | + | chr2_2:50974728-50974747 | None:intergenic | 25.0% |
| ! | TTCAACATTTCCTAAAACAT+AGG | + | chr2_2:50974831-50974850 | None:intergenic | 25.0% |
| TTGAGGCTAATGAGAATAAA+AGG | + | chr2_2:50972816-50972835 | None:intergenic | 30.0% | |
| ! | GAGTTGAATTTCTTTGTTGT+TGG | + | chr2_2:50972886-50972905 | None:intergenic | 30.0% |
| ! | ATGGAAAGTATAAGGAGAAT+TGG | + | chr2_2:50972984-50973003 | None:intergenic | 30.0% |
| ! | GTTTCTTGATGGAAAGTATA+AGG | + | chr2_2:50972992-50973011 | None:intergenic | 30.0% |
| !! | TAGTGCCTTCAATTTTGAAA+AGG | + | chr2_2:50973038-50973057 | None:intergenic | 30.0% |
| AATTGCACTCCTATAATTAG+TGG | - | chr2_2:50973543-50973562 | Msa0256270:CDS | 30.0% | |
| TTGGAACTTCCACTAATTAT+AGG | + | chr2_2:50973555-50973574 | None:intergenic | 30.0% | |
| CATATGTGATGGTAATTGAT+TGG | + | chr2_2:50973574-50973593 | None:intergenic | 30.0% | |
| ! | CATCACATATGTCTTTGAAA+GGG | - | chr2_2:50973583-50973602 | Msa0256270:CDS | 30.0% |
| ! | AAGAATAGGATTAGGGTTTT+GGG | - | chr2_2:50973627-50973646 | Msa0256270:CDS | 30.0% |
| ! | TACCAAAACTATGTTGATAG+GGG | - | chr2_2:50973707-50973726 | Msa0256270:CDS | 30.0% |
| !! | TAGATTTGCTACCATTGAAA+TGG | + | chr2_2:50973779-50973798 | None:intergenic | 30.0% |
| ! | TTTTTGATCGACCAAATTGA+GGG | + | chr2_2:50973858-50973877 | None:intergenic | 30.0% |
| ! | ATTTTTGATCGACCAAATTG+AGG | + | chr2_2:50973859-50973878 | None:intergenic | 30.0% |
| ACTTCAAAACGATAACAGTT+AGG | - | chr2_2:50973934-50973953 | Msa0256270:CDS | 30.0% | |
| ATTGATTAACTCTACCAAGT+TGG | + | chr2_2:50974013-50974032 | None:intergenic | 30.0% | |
| ATGTCATATGAATATGCATC+TGG | + | chr2_2:50974080-50974099 | None:intergenic | 30.0% | |
| TACTCATCATCAACAAATGA+AGG | + | chr2_2:50974161-50974180 | None:intergenic | 30.0% | |
| ATCAAATTCACTTCTTGAGA+AGG | + | chr2_2:50974204-50974223 | None:intergenic | 30.0% | |
| AACAAGGAATTCTTGTCAAA+AGG | + | chr2_2:50974305-50974324 | None:intergenic | 30.0% | |
| ! | TCTAAACGTTTGAAGTAAAG+AGG | + | chr2_2:50974554-50974573 | None:intergenic | 30.0% |
| TCTTTACTTCAAACGTTTAG+AGG | - | chr2_2:50974553-50974572 | Msa0256270:CDS | 30.0% | |
| AAGAAGAGAGAAGAAATGTT+TGG | - | chr2_2:50974600-50974619 | Msa0256270:CDS | 30.0% | |
| CATCATGAAAATTGAGATGA+AGG | + | chr2_2:50974729-50974748 | None:intergenic | 30.0% | |
| ! | AAAACATAGGTTGTGTTGTT+AGG | + | chr2_2:50974818-50974837 | None:intergenic | 30.0% |
| ! | AACAACACAACCTATGTTTT+AGG | - | chr2_2:50974818-50974837 | Msa0256270:CDS | 30.0% |
| ! | ATTGCTGTTGAAGTTAAAGA+AGG | - | chr2_2:50975039-50975058 | Msa0256270:CDS | 30.0% |
| GTTAAAGAAGGATAGAGATT+CGG | - | chr2_2:50975051-50975070 | Msa0256270:CDS | 30.0% | |
| TGGGAGAACATAAAATCTTA+TGG | - | chr2_2:50975115-50975134 | Msa0256270:CDS | 30.0% | |
| GAGAACATAAAATCTTATGG+TGG | - | chr2_2:50975118-50975137 | Msa0256270:CDS | 30.0% | |
| CATAAAATCTTATGGTGGTT+TGG | - | chr2_2:50975123-50975142 | Msa0256270:CDS | 30.0% | |
| AACAAGTTCAGAATTACTTG+TGG | + | chr2_2:50975169-50975188 | None:intergenic | 30.0% | |
| ! | CTTTCATGCTCATTTTACTT+TGG | - | chr2_2:50975211-50975230 | Msa0256270:CDS | 30.0% |
| ! | AGAAGTATAGGTCATTATCT+TGG | + | chr2_2:50975300-50975319 | None:intergenic | 30.0% |
| TTGGGATATTATCATTCCTT+TGG | - | chr2_2:50975354-50975373 | Msa0256270:CDS | 30.0% | |
| GATATTATCATTCCTTTGGT+AGG | - | chr2_2:50975358-50975377 | Msa0256270:CDS | 30.0% | |
| !!! | ATCTACTTGCAGCAATTTTT+TGG | - | chr2_2:50975400-50975419 | Msa0256270:CDS | 30.0% |
| TTTGATCCTTTGAATCTATG+AGG | + | chr2_2:50975442-50975461 | None:intergenic | 30.0% | |
| TCATAGATTCAAAGGATCAA+AGG | - | chr2_2:50975441-50975460 | Msa0256270:CDS | 30.0% | |
| CATAGATTCAAAGGATCAAA+GGG | - | chr2_2:50975442-50975461 | Msa0256270:CDS | 30.0% | |
| !! | TTGTTGTTGGAGTTGTTTCT+GGG | + | chr2_2:50972873-50972892 | None:intergenic | 35.0% |
| !! | TTTGTTGTTGGAGTTGTTTC+TGG | + | chr2_2:50972874-50972893 | None:intergenic | 35.0% |
| CAGTGTTGTGATCACTTATA+GGG | + | chr2_2:50972912-50972931 | None:intergenic | 35.0% | |
| TCATCAACATTGATGCTTCT+TGG | - | chr2_2:50972956-50972975 | Msa0256270:CDS | 35.0% | |
| GTTGCATATGTGTTTCTTGA+TGG | + | chr2_2:50973003-50973022 | None:intergenic | 35.0% | |
| !! | CCTTCAATTTTGAAAAGGTG+AGG | + | chr2_2:50973033-50973052 | None:intergenic | 35.0% |
| ! | CCTCACCTTTTCAAAATTGA+AGG | - | chr2_2:50973030-50973049 | Msa0256270:CDS | 35.0% |
| !! | AGCATCATTGTTGGTTCTAA+AGG | + | chr2_2:50973064-50973083 | None:intergenic | 35.0% |
| TACTTAACCTTCAAGCTTGA+TGG | - | chr2_2:50973114-50973133 | Msa0256270:CDS | 35.0% | |
| ATCTTCAGGAAATGTTTGCA+TGG | - | chr2_2:50973149-50973168 | Msa0256270:CDS | 35.0% | |
| !! | AGCAAAGGTGTTTCGAAAAA+AGG | - | chr2_2:50973180-50973199 | Msa0256270:CDS | 35.0% |
| !! | AGAGAGTTTGAGTTCTGAAA+AGG | - | chr2_2:50973287-50973306 | Msa0256270:CDS | 35.0% |
| ! | GTTGAAAACGAGTTCTCTTT+TGG | - | chr2_2:50973393-50973412 | Msa0256270:CDS | 35.0% |
| !!! | TTTTGGTAGTGATGATGATG+AGG | - | chr2_2:50973410-50973429 | Msa0256270:CDS | 35.0% |
| CCTTTCAAAGACATATGTGA+TGG | + | chr2_2:50973585-50973604 | None:intergenic | 35.0% | |
| CCATCACATATGTCTTTGAA+AGG | - | chr2_2:50973582-50973601 | Msa0256270:CDS | 35.0% | |
| ! | GAAGAATAGGATTAGGGTTT+TGG | - | chr2_2:50973626-50973645 | Msa0256270:CDS | 35.0% |
| ! | AGAATAGGATTAGGGTTTTG+GGG | - | chr2_2:50973628-50973647 | Msa0256270:CDS | 35.0% |
| TGGAATAGGAATAATAGCCA+AGG | - | chr2_2:50973678-50973697 | Msa0256270:CDS | 35.0% | |
| !!! | TAGTTTTGGTATTGAAGCCT+TGG | + | chr2_2:50973698-50973717 | None:intergenic | 35.0% |
| ! | TTCCCCTATCAACATAGTTT+TGG | + | chr2_2:50973712-50973731 | None:intergenic | 35.0% |
| ! | AAAACTATGTTGATAGGGGA+AGG | - | chr2_2:50973711-50973730 | Msa0256270:CDS | 35.0% |
| ! | GTAGTTCTTTGCCATTTCAA+TGG | - | chr2_2:50973765-50973784 | Msa0256270:CDS | 35.0% |
| ! | TTTTGATCGACCAAATTGAG+GGG | + | chr2_2:50973857-50973876 | None:intergenic | 35.0% |
| ! | AGGAATGATGATGCGAATTA+TGG | - | chr2_2:50973954-50973973 | Msa0256270:CDS | 35.0% |
| AGGTATGAATATAGCCAACT+TGG | - | chr2_2:50973996-50974015 | Msa0256270:CDS | 35.0% | |
| ACAAAGTTGTTGAGAACCAA+GGG | - | chr2_2:50974045-50974064 | Msa0256270:CDS | 35.0% | |
| AGTCCAAAAAAAGAGTAGCT+TGG | - | chr2_2:50974123-50974142 | Msa0256270:CDS | 35.0% | |
| GTCCAAAAAAAGAGTAGCTT+GGG | - | chr2_2:50974124-50974143 | Msa0256270:CDS | 35.0% | |
| TCCAAAAAAAGAGTAGCTTG+GGG | - | chr2_2:50974125-50974144 | Msa0256270:CDS | 35.0% | |
| ATCATCAACAAATGAAGGAG+AGG | + | chr2_2:50974156-50974175 | None:intergenic | 35.0% | |
| TTCACTTCTTGAGAAGGAAA+CGG | + | chr2_2:50974198-50974217 | None:intergenic | 35.0% | |
| TCAAGAAGTGAATTTGATGC+TGG | - | chr2_2:50974206-50974225 | Msa0256270:CDS | 35.0% | |
| GGAATCGTGAACAATGATAA+TGG | - | chr2_2:50974227-50974246 | Msa0256270:CDS | 35.0% | |
| GGAGTTTATGATTCAAGAGA+TGG | - | chr2_2:50974362-50974381 | Msa0256270:CDS | 35.0% | |
| AACACCAACAGCAAATTCTT+TGG | - | chr2_2:50974430-50974449 | Msa0256270:CDS | 35.0% | |
| ! | ACGTTTGAAGTAAAGAGGAT+CGG | + | chr2_2:50974549-50974568 | None:intergenic | 35.0% |
| GAGAAGAAATGTTTGGAGAA+TGG | - | chr2_2:50974607-50974626 | Msa0256270:CDS | 35.0% | |
| AAATGTTTGGAGAATGGACA+TGG | - | chr2_2:50974613-50974632 | Msa0256270:CDS | 35.0% | |
| AATGGACATGGAAGTTATCA+TGG | - | chr2_2:50974625-50974644 | Msa0256270:CDS | 35.0% | |
| !! | ATGATGTCGATTCTCACATT+TGG | - | chr2_2:50974743-50974762 | Msa0256270:CDS | 35.0% |
| ! | CACATATGAAGCTTTTCTCT+CGG | + | chr2_2:50974984-50975003 | None:intergenic | 35.0% |
| ATAATCCGACAGCATACAAA+GGG | + | chr2_2:50975012-50975031 | None:intergenic | 35.0% | |
| AATAATCCGACAGCATACAA+AGG | + | chr2_2:50975013-50975032 | None:intergenic | 35.0% | |
| ! | GATTTTATGTTCTCCCATGA+CGG | + | chr2_2:50975112-50975131 | None:intergenic | 35.0% |
| !! | ATCTTATGGTGGTTTGGTAT+TGG | - | chr2_2:50975129-50975148 | Msa0256270:CDS | 35.0% |
| ACATGCTTACGATCTTTACA+GGG | - | chr2_2:50975258-50975277 | Msa0256270:CDS | 35.0% | |
| !! | GTAAAAATCTTGGCTTGGAT+CGG | + | chr2_2:50975326-50975345 | None:intergenic | 35.0% |
| GTTGAGTAAAAATCTTGGCT+TGG | + | chr2_2:50975331-50975350 | None:intergenic | 35.0% | |
| CCAGTGTTGTGATCACTTAT+AGG | + | chr2_2:50972913-50972932 | None:intergenic | 40.0% | |
| CCTATAAGTGATCACAACAC+TGG | - | chr2_2:50972910-50972929 | Msa0256270:CDS | 40.0% | |
| ! | CACAACACTGGTTACTACAT+AGG | - | chr2_2:50972922-50972941 | Msa0256270:CDS | 40.0% |
| ! | AACACTGGTTACTACATAGG+AGG | - | chr2_2:50972925-50972944 | Msa0256270:CDS | 40.0% |
| CCAAAAACCATCAAGCTTGA+AGG | + | chr2_2:50973124-50973143 | None:intergenic | 40.0% | |
| !! | CCTTCAAGCTTGATGGTTTT+TGG | - | chr2_2:50973121-50973140 | Msa0256270:CDS | 40.0% |
| !!! | GGTTTTTGGTCTCAATCTTC+AGG | - | chr2_2:50973135-50973154 | Msa0256270:CDS | 40.0% |
| TCAGGAAATGTTTGCATGGT+TGG | - | chr2_2:50973153-50973172 | Msa0256270:CDS | 40.0% | |
| TGCATGGTTGGAAAAAGCAA+AGG | - | chr2_2:50973165-50973184 | Msa0256270:CDS | 40.0% | |
| ! | TAGTGATGATGATGAGGATG+AGG | - | chr2_2:50973416-50973435 | Msa0256270:CDS | 40.0% |
| ! | AGTGATGATGATGAGGATGA+GGG | - | chr2_2:50973417-50973436 | Msa0256270:CDS | 40.0% |
| CTTCTAATAGCACTTGAGAG+AGG | + | chr2_2:50973483-50973502 | None:intergenic | 40.0% | |
| ACTCATGAGTGTACTCTAGT+TGG | + | chr2_2:50973509-50973528 | None:intergenic | 40.0% | |
| !! | GAATAGGATTAGGGTTTTGG+GGG | - | chr2_2:50973629-50973648 | Msa0256270:CDS | 40.0% |
| TGGTAGCAAATCTACATCCT+TGG | - | chr2_2:50973785-50973804 | Msa0256270:CDS | 40.0% | |
| AGCAAATCTACATCCTTGGA+TGG | - | chr2_2:50973789-50973808 | Msa0256270:CDS | 40.0% | |
| GCAAATCTACATCCTTGGAT+GGG | - | chr2_2:50973790-50973809 | Msa0256270:CDS | 40.0% | |
| GATTGAGATTCCCCTCAATT+TGG | - | chr2_2:50973844-50973863 | Msa0256270:CDS | 40.0% | |
| GTAGCATAGTTGGCCAAATT+TGG | - | chr2_2:50973883-50973902 | Msa0256270:CDS | 40.0% | |
| ! | CCAAATTTGGAGCAACAAGA+GGG | - | chr2_2:50973896-50973915 | Msa0256270:CDS | 40.0% |
| ! | TGATGATGCGAATTATGGTG+TGG | - | chr2_2:50973959-50973978 | Msa0256270:CDS | 40.0% |
| GATGATGCGAATTATGGTGT+GGG | - | chr2_2:50973960-50973979 | Msa0256270:CDS | 40.0% | |
| ATGATGCGAATTATGGTGTG+GGG | - | chr2_2:50973961-50973980 | Msa0256270:CDS | 40.0% | |
| TTCTCAACAACTTTGTGTCG+TGG | + | chr2_2:50974041-50974060 | None:intergenic | 40.0% | |
| CACAAAGTTGTTGAGAACCA+AGG | - | chr2_2:50974044-50974063 | Msa0256270:CDS | 40.0% | |
| TTGTTGAGAACCAAGGGAAA+AGG | - | chr2_2:50974051-50974070 | Msa0256270:CDS | 40.0% | |
| !!! | ACCCCAAGCTACTCTTTTTT+TGG | + | chr2_2:50974129-50974148 | None:intergenic | 40.0% |
| AGGAAACGGAAGATGTAGAT+TGG | + | chr2_2:50974184-50974203 | None:intergenic | 40.0% | |
| GATGGAACCTTGTGTATGAT+TGG | - | chr2_2:50974380-50974399 | Msa0256270:CDS | 40.0% | |
| !! | CAGTCCAAAGAATTTGCTGT+TGG | + | chr2_2:50974437-50974456 | None:intergenic | 40.0% |
| AGTAAAGAGGATCGGATTCT+GGG | + | chr2_2:50974541-50974560 | None:intergenic | 40.0% | |
| AAGTAAAGAGGATCGGATTC+TGG | + | chr2_2:50974542-50974561 | None:intergenic | 40.0% | |
| !! | CAAACGTTTAGAGGTATCTG+CGG | - | chr2_2:50974562-50974581 | Msa0256270:CDS | 40.0% |
| ! | ACTCTAGCATGTGTTTTCGT+CGG | - | chr2_2:50974662-50974681 | Msa0256270:CDS | 40.0% |
| CATTAGGGTTTCTCTTCACA+TGG | + | chr2_2:50974700-50974719 | None:intergenic | 40.0% | |
| ! | AGATGAAGGGAAGCACATTA+GGG | + | chr2_2:50974715-50974734 | None:intergenic | 40.0% |
| GCTTCGAAATTGAGAACAAG+TGG | + | chr2_2:50974779-50974798 | None:intergenic | 40.0% | |
| AAGTGTTAGGCTAATCAGCA+TGG | - | chr2_2:50974874-50974893 | Msa0256270:CDS | 40.0% | |
| ACCAAGTTAGATACAGGAGA+CGG | + | chr2_2:50974919-50974938 | None:intergenic | 40.0% | |
| ! | CTTGCTTTCGTCAGTTTTTC+TGG | + | chr2_2:50974945-50974964 | None:intergenic | 40.0% |
| ACGAAAGCAAGAACAATCTC+TGG | - | chr2_2:50974954-50974973 | Msa0256270:CDS | 40.0% | |
| ! | TTGGTAGACTTGGTACATTG+AGG | + | chr2_2:50975080-50975099 | None:intergenic | 40.0% |
| ! | GATCATGTTGTTGGTAGACT+TGG | + | chr2_2:50975090-50975109 | None:intergenic | 40.0% |
| !! | TATGGTGGTTTGGTATTGGA+TGG | - | chr2_2:50975133-50975152 | Msa0256270:CDS | 40.0% |
| CTGTAAAGATCGTAAGCATG+TGG | + | chr2_2:50975259-50975278 | None:intergenic | 40.0% | |
| CACATGCTTACGATCTTTAC+AGG | - | chr2_2:50975257-50975276 | Msa0256270:CDS | 40.0% | |
| ! | TTGGATCGGCATAGAAGTAT+AGG | + | chr2_2:50975312-50975331 | None:intergenic | 40.0% |
| GCAAGTACAATACCTACCAA+AGG | + | chr2_2:50975373-50975392 | None:intergenic | 40.0% | |
| GTTCTGCCTCATAGATTCAA+AGG | - | chr2_2:50975433-50975452 | Msa0256270:CDS | 40.0% | |
| AGGATCAAAGGGATATGCAA+AGG | - | chr2_2:50975453-50975472 | Msa0256270:CDS | 40.0% | |
| TCTACTTCTCCTTCTGATTC+AGG | + | chr2_2:50975481-50975500 | None:intergenic | 40.0% | |
| !! | TGGAGTTGTTTCTGGGATGA+TGG | + | chr2_2:50972866-50972885 | None:intergenic | 45.0% |
| ! | CTATGTTGATAGGGGAAGGA+TGG | - | chr2_2:50973715-50973734 | Msa0256270:CDS | 45.0% |
| ! | GCCAAATTTGGAGCAACAAG+AGG | - | chr2_2:50973895-50973914 | Msa0256270:CDS | 45.0% |
| CCCTCTTGTTGCTCCAAATT+TGG | + | chr2_2:50973899-50973918 | None:intergenic | 45.0% | |
| TGATGCGAATTATGGTGTGG+GGG | - | chr2_2:50973962-50973981 | Msa0256270:CDS | 45.0% | |
| ! | CATCTGGATACCTTTTCCCT+TGG | + | chr2_2:50974064-50974083 | None:intergenic | 45.0% |
| GTCAAAAGGCGAAGAAGACA+TGG | + | chr2_2:50974291-50974310 | None:intergenic | 45.0% | |
| TTGGTGAAGATTTCGGCAGA+AGG | - | chr2_2:50974341-50974360 | Msa0256270:CDS | 45.0% | |
| ACGGCAACCAATCATACACA+AGG | + | chr2_2:50974390-50974409 | None:intergenic | 45.0% | |
| ! | CCTTGTTTGACACAAGGTCA+CGG | + | chr2_2:50974409-50974428 | None:intergenic | 45.0% |
| CGTGACCTTGTGTCAAACAA+GGG | - | chr2_2:50974407-50974426 | Msa0256270:CDS | 45.0% | |
| ! | GTGTTCCCTTGTTTGACACA+AGG | + | chr2_2:50974415-50974434 | None:intergenic | 45.0% |
| ! | GAGATGAAGGGAAGCACATT+AGG | + | chr2_2:50974716-50974735 | None:intergenic | 45.0% |
| TCCGTCTCCTGTATCTAACT+TGG | - | chr2_2:50974915-50974934 | Msa0256270:CDS | 45.0% | |
| TGGACGACCAAGTTAGATAC+AGG | + | chr2_2:50974925-50974944 | None:intergenic | 45.0% | |
| ACCTTCCCTTTGTATGCTGT+CGG | - | chr2_2:50975004-50975023 | Msa0256270:CDS | 45.0% | |
| ACCAACAACATGATCCGTCA+TGG | - | chr2_2:50975095-50975114 | Msa0256270:CDS | 45.0% | |
| CCAACAACATGATCCGTCAT+GGG | - | chr2_2:50975096-50975115 | Msa0256270:CDS | 45.0% | |
| ! | TGTTGATAGGGGAAGGATGG+TGG | - | chr2_2:50973718-50973737 | Msa0256270:CDS | 50.0% |
| ! | GTTGATAGGGGAAGGATGGT+GGG | - | chr2_2:50973719-50973738 | Msa0256270:CDS | 50.0% |
| TCCTTGGATGGGACTCATGT+TGG | - | chr2_2:50973801-50973820 | Msa0256270:CDS | 50.0% | |
| ACCAACATGAGTCCCATCCA+AGG | + | chr2_2:50973805-50973824 | None:intergenic | 50.0% | |
| GATGCGAATTATGGTGTGGG+GGG | - | chr2_2:50973963-50973982 | Msa0256270:CDS | 50.0% | |
| GTGTGGGGGGTAAAGACTTA+AGG | - | chr2_2:50973976-50973995 | Msa0256270:CDS | 50.0% | |
| CCGTGACCTTGTGTCAAACA+AGG | - | chr2_2:50974406-50974425 | Msa0256270:CDS | 50.0% | |
| TCCGACAGCATACAAAGGGA+AGG | + | chr2_2:50975008-50975027 | None:intergenic | 50.0% | |
| !! | CCCATGACGGATCATGTTGT+TGG | + | chr2_2:50975099-50975118 | None:intergenic | 50.0% |
| !! | GCAAAGGTGCCTGAATCAGA+AGG | - | chr2_2:50975469-50975488 | Msa0256270:CDS | 50.0% |
| GCGAAGAAGACATGGCTGAG+AGG | + | chr2_2:50974283-50974302 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 50972760 | 50975516 | 50972760 | ID=Msa0256270;Name=Msa0256270 |
| chr2_2 | mRNA | 50972760 | 50975516 | 50972760 | ID=Msa0256270-mRNA-1;Parent=Msa0256270;Name=Msa0256270-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|918 |
| chr2_2 | exon | 50972760 | 50975516 | 50972760 | ID=Msa0256270-mRNA-1:exon:15353;Parent=Msa0256270-mRNA-1 |
| chr2_2 | CDS | 50972760 | 50975516 | 50972760 | ID=Msa0256270-mRNA-1:cds;Parent=Msa0256270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
