AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1130630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130630 MtrunA17_Chr7g0275531 86.364 286 19 3 1 273 1 279 1.71e-175 488
Msa1130630 MtrunA17_Chr8g0347251 46.918 292 115 9 1 269 1 275 3.29e-70 221
Msa1130630 MtrunA17_Chr3g0126391 53.125 192 67 9 12 185 7 193 6.16e-54 179
Msa1130630 MtrunA17_Chr8g0387981 44.103 195 98 5 1 186 1 193 2.75e-42 149
Msa1130630 MtrunA17_Chr7g0244981 33.500 200 108 5 9 198 11 195 6.61e-26 104
Msa1130630 MtrunA17_Chr7g0244971 32.275 189 97 5 9 184 12 182 5.86e-25 102
Msa1130630 MtrunA17_Chr8g0334541 36.364 176 85 5 15 184 8 162 1.92e-24 100
Msa1130630 MtrunA17_Chr2g0315371 31.313 198 100 6 11 184 15 200 6.38e-21 90.9
Msa1130630 MtrunA17_Chr8g0350621 30.556 180 96 7 15 184 10 170 2.86e-20 88.6
Msa1130630 MtrunA17_Chr3g0128671 31.492 181 93 5 18 184 23 186 1.14e-19 87.4
Msa1130630 MtrunA17_Chr5g0428351 31.892 185 101 6 7 189 87 248 1.17e-19 87.8
Msa1130630 MtrunA17_Chr2g0315381 45.349 86 37 2 100 184 127 203 9.18e-19 85.1
Msa1130630 MtrunA17_Chr2g0315361 45.349 86 38 2 99 184 131 207 1.59e-17 81.6
Msa1130630 MtrunA17_Chr1g0147881 43.529 85 44 2 98 182 237 317 1.28e-16 79.3
Msa1130630 MtrunA17_Chr7g0270051 40.870 115 63 3 78 189 3 115 2.94e-16 77.4
Msa1130630 MtrunA17_Chr7g0224801 56.250 64 23 2 124 187 92 150 1.24e-15 73.6
Msa1130630 MtrunA17_Chr7g0270191 40.594 101 56 2 88 187 107 204 1.38e-15 75.9
Msa1130630 MtrunA17_Chr4g0071521 32.624 141 72 3 42 182 183 300 1.78e-15 75.9
Msa1130630 MtrunA17_Chr8g0387501 47.297 74 33 3 121 194 125 192 2.96e-15 74.7
Msa1130630 MtrunA17_Chr8g0348311 53.226 62 25 2 126 187 156 213 3.38e-15 75.1
Msa1130630 MtrunA17_Chr8g0379461 39.796 98 52 2 118 215 69 159 3.64e-15 73.9
Msa1130630 MtrunA17_Chr5g0401821 54.386 57 24 1 126 182 200 254 1.46e-14 72.4
Msa1130630 MtrunA17_Chr7g0248691 51.515 66 26 2 126 191 155 214 2.44e-14 72.4
Msa1130630 MtrunA17_Chr2g0293481 41.748 103 52 4 126 222 268 368 3.14e-14 73.2
Msa1130630 MtrunA17_Chr2g0284321 37.624 101 51 3 126 226 36 124 5.51e-14 70.1
Msa1130630 MtrunA17_Chr2g0319961 43.750 96 48 3 99 190 50 143 6.38e-14 70.5
Msa1130630 MtrunA17_Chr5g0418781 52.381 63 26 2 124 186 123 181 7.09e-14 70.5
Msa1130630 MtrunA17_Chr1g0184691 52.632 57 25 1 126 182 294 348 1.12e-13 70.9
Msa1130630 MtrunA17_Chr8g0386241 46.269 67 31 2 124 190 102 163 2.46e-13 67.4
Msa1130630 MtrunA17_Chr7g0228941 52.632 57 25 1 126 182 53 107 2.96e-13 65.9
Msa1130630 MtrunA17_Chr4g0053281 50.877 57 26 1 126 182 267 321 3.22e-13 69.3
Msa1130630 MtrunA17_Chr1g0194481 50.000 64 27 2 124 187 157 215 3.55e-13 69.3
Msa1130630 MtrunA17_Chr3g0079691 42.308 78 39 3 117 194 272 343 4.18e-13 70.1
Msa1130630 MtrunA17_Chr3g0079691 33.663 101 59 2 124 219 494 591 9.34e-11 62.8
Msa1130630 MtrunA17_Chr4g0051881 47.143 70 32 2 124 193 177 241 4.23e-13 68.9
Msa1130630 MtrunA17_Chr4g0042831 43.421 76 32 2 125 200 145 209 4.64e-13 69.3
Msa1130630 MtrunA17_Chr4g0042831 44.776 67 34 1 124 190 277 340 1.29e-11 64.7
Msa1130630 MtrunA17_Chr5g0443131 49.153 59 27 1 124 182 156 211 5.77e-13 68.6
Msa1130630 MtrunA17_Chr2g0294231 48.438 64 30 1 124 187 202 262 5.78e-13 68.9
Msa1130630 MtrunA17_Chr7g0238921 49.275 69 28 2 114 182 117 178 9.62e-13 67.8
Msa1130630 MtrunA17_Chr3g0129361 44.444 72 37 1 112 183 131 199 1.05e-12 66.2
Msa1130630 MtrunA17_Chr5g0418191 46.269 67 33 1 124 190 319 382 1.08e-12 68.2
Msa1130630 MtrunA17_Chr5g0418191 35.652 115 65 4 125 239 151 256 4.99e-11 63.2
Msa1130630 MtrunA17_Chr8g0383351 50.847 59 26 1 124 182 159 214 1.34e-12 66.2
Msa1130630 MtrunA17_Chr5g0431811 39.535 86 47 2 125 206 672 756 1.49e-12 68.6
Msa1130630 MtrunA17_Chr7g0218081 46.154 65 31 2 125 189 228 288 1.52e-12 68.2
Msa1130630 MtrunA17_Chr7g0218081 44.776 67 34 1 124 190 409 472 3.88e-12 66.6
Msa1130630 MtrunA17_Chr7g0263531 31.667 120 78 2 126 245 190 305 2.02e-12 67.4
Msa1130630 MtrunA17_Chr3g0139021 52.632 57 25 1 126 182 315 369 2.11e-12 67.4
Msa1130630 MtrunA17_Chr1g0202461 44.928 69 32 2 126 194 262 324 2.13e-12 67.4
Msa1130630 MtrunA17_Chr5g0445311 44.776 67 34 1 124 190 363 426 2.31e-12 67.4
Msa1130630 MtrunA17_Chr5g0445311 45.833 72 33 3 123 194 198 263 3.61e-12 67.0
Msa1130630 MtrunA17_Chr3g0101131 47.143 70 31 3 125 194 243 306 2.58e-12 67.4
Msa1130630 MtrunA17_Chr3g0101131 44.776 67 34 1 124 190 414 477 5.07e-12 66.6
Msa1130630 MtrunA17_Chr8g0335811 45.070 71 36 1 112 182 141 208 5.71e-12 64.3
Msa1130630 MtrunA17_Chr4g0068541 45.312 64 32 1 124 187 207 267 6.75e-12 65.9
Msa1130630 MtrunA17_Chr7g0249311 44.615 65 32 2 125 189 179 239 1.46e-11 65.1
Msa1130630 MtrunA17_Chr7g0248721 50.000 64 26 3 124 187 140 197 1.65e-11 62.8
Msa1130630 MtrunA17_Chr5g0432161 44.776 67 34 1 124 190 420 483 2.92e-11 64.3
Msa1130630 MtrunA17_Chr2g0322391 48.485 66 32 1 124 189 348 411 3.80e-11 63.9
Msa1130630 MtrunA17_Chr3g0106491 43.284 67 35 1 124 190 364 427 6.41e-11 63.2
Msa1130630 MtrunA17_Chr1g0150801 42.424 66 33 2 124 189 101 161 7.44e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1130630 AT4G11070.1 49.763 211 77 8 8 195 7 211 5.98e-49 166
Msa1130630 AT4G11070.2 48.691 191 77 6 8 195 7 179 1.11e-44 154
Msa1130630 AT4G23810.1 40.948 232 80 8 11 195 13 234 2.82e-43 151
Msa1130630 AT5G24110.1 42.929 198 90 6 12 209 17 191 6.32e-43 150
Msa1130630 AT2G46400.1 38.554 249 128 7 12 258 8 233 2.17e-38 138
Msa1130630 AT3G56400.1 32.353 204 104 5 3 191 2 186 1.21e-26 106
Msa1130630 AT2G40750.1 28.352 261 151 7 5 233 8 264 1.69e-23 99.4
Msa1130630 AT2G40740.3 48.315 89 46 0 117 205 174 262 1.02e-22 96.3
Msa1130630 AT2G40740.1 42.202 109 61 1 99 205 145 253 1.06e-22 95.9
Msa1130630 AT5G45260.1 47.423 97 41 4 99 195 1188 1274 6.01e-19 88.2
Msa1130630 AT1G66550.1 29.282 181 90 6 16 184 13 167 5.20e-16 76.6
Msa1130630 AT1G66600.1 40.909 88 45 1 104 184 75 162 1.84e-15 75.1
Msa1130630 AT5G52830.1 54.839 62 26 1 126 187 166 225 2.28e-15 76.3
Msa1130630 AT1G29280.1 53.226 62 25 2 126 187 75 132 3.25e-15 74.7
Msa1130630 AT1G66550.2 28.333 180 88 6 16 184 13 162 1.12e-14 72.8
Msa1130630 AT4G31550.2 44.048 84 43 2 99 182 221 300 1.13e-14 73.9
Msa1130630 AT5G49520.1 50.000 64 29 1 124 187 220 280 1.23e-14 74.3
Msa1130630 AT4G31550.1 54.386 57 24 1 126 182 247 301 2.64e-14 72.8
Msa1130630 AT2G30590.1 50.794 63 27 2 126 188 314 372 5.60e-14 72.4
Msa1130630 AT4G01250.1 51.613 62 26 2 126 187 129 186 8.21e-14 71.2
Msa1130630 AT1G30650.1 49.275 69 29 3 126 194 218 280 9.64e-14 72.0
Msa1130630 AT1G66560.1 46.667 60 32 0 125 184 103 162 1.37e-13 69.7
Msa1130630 AT2G34830.1 35.938 128 58 6 78 187 152 273 1.37e-13 71.2
Msa1130630 AT2G34830.2 35.938 128 58 6 78 187 161 282 1.44e-13 71.2
Msa1130630 AT2G37260.3 35.345 116 60 3 72 182 218 323 2.65e-13 70.1
Msa1130630 AT2G24570.1 54.386 57 24 1 126 182 244 298 2.66e-13 69.7
Msa1130630 AT2G37260.2 35.345 116 60 3 72 182 216 321 2.83e-13 70.1
Msa1130630 AT2G37260.1 35.345 116 60 3 72 182 298 403 3.25e-13 70.1
Msa1130630 AT1G69310.4 49.153 59 27 1 124 182 146 201 5.64e-13 68.6
Msa1130630 AT1G69310.2 49.153 59 27 1 124 182 146 201 5.64e-13 68.6
Msa1130630 AT1G69310.1 49.153 59 27 1 124 182 146 201 5.64e-13 68.6
Msa1130630 AT2G23320.1 50.877 57 26 1 126 182 241 295 6.32e-13 68.6
Msa1130630 AT5G13080.1 51.562 64 26 2 124 187 66 124 8.02e-13 65.5
Msa1130630 AT3G58710.2 43.011 93 45 4 99 187 40 128 1.02e-12 67.8
Msa1130630 AT3G58710.1 50.000 62 27 2 126 187 72 129 1.03e-12 67.8
Msa1130630 AT5G41570.1 43.038 79 40 2 112 190 85 158 1.09e-12 65.9
Msa1130630 AT4G24240.1 41.667 84 45 2 99 182 257 336 1.13e-12 68.2
Msa1130630 AT1G29860.1 40.476 84 45 2 110 193 121 199 1.19e-12 67.4
Msa1130630 AT5G28650.1 52.632 57 25 1 126 182 263 317 1.28e-12 67.8
Msa1130630 AT1G64000.1 40.659 91 43 3 112 196 101 186 1.53e-12 65.9
Msa1130630 AT4G23550.1 47.458 59 29 1 124 182 139 195 1.64e-12 67.4
Msa1130630 AT2G47260.1 37.778 90 53 1 98 187 147 233 1.70e-12 67.8
Msa1130630 AT2G46130.1 48.438 64 28 2 124 187 29 87 1.74e-12 63.5
Msa1130630 AT1G80590.1 39.241 79 45 1 112 187 69 147 2.46e-12 65.9
Msa1130630 AT4G18170.1 35.238 105 63 2 83 187 130 229 2.58e-12 67.0
Msa1130630 AT3G62340.1 48.438 64 30 1 124 187 117 177 4.48e-12 65.9
Msa1130630 AT4G26640.7 45.714 70 32 3 125 194 171 234 5.68e-12 66.6
Msa1130630 AT4G26640.7 44.776 67 34 1 124 190 340 403 1.00e-11 65.9
Msa1130630 AT3G04670.1 50.877 57 26 1 126 182 263 317 5.70e-12 65.9
Msa1130630 AT4G26640.5 45.070 71 33 3 124 194 34 98 5.83e-12 66.2
Msa1130630 AT4G26640.5 44.776 67 34 1 124 190 204 267 1.15e-11 65.5
Msa1130630 AT4G26640.6 45.070 71 33 3 124 194 34 98 5.83e-12 66.2
Msa1130630 AT4G26640.6 44.776 67 34 1 124 190 204 267 1.15e-11 65.5
Msa1130630 AT4G26640.4 45.070 71 33 3 124 194 34 98 5.83e-12 66.2
Msa1130630 AT4G26640.4 44.776 67 34 1 124 190 204 267 1.15e-11 65.5
Msa1130630 AT4G26640.3 45.070 71 33 3 124 194 34 98 5.83e-12 66.2
Msa1130630 AT4G26640.3 44.776 67 34 1 124 190 204 267 1.15e-11 65.5
Msa1130630 AT4G26640.2 45.714 70 32 3 125 194 211 274 5.89e-12 66.6
Msa1130630 AT4G26640.2 44.776 67 34 1 124 190 380 443 1.11e-11 65.9
Msa1130630 AT3G01970.1 48.529 68 30 2 124 191 64 126 5.94e-12 63.2
Msa1130630 AT4G26640.1 45.714 70 32 3 125 194 139 202 6.24e-12 66.6
Msa1130630 AT4G26640.1 44.776 67 34 1 124 190 308 371 1.14e-11 65.9
Msa1130630 AT2G25000.2 44.776 67 35 1 123 189 101 165 6.65e-12 64.7
Msa1130630 AT2G25000.4 44.776 67 35 1 123 189 101 165 6.65e-12 64.7
Msa1130630 AT2G44745.1 45.070 71 36 1 112 182 132 199 7.24e-12 64.3
Msa1130630 AT5G46350.1 46.875 64 29 2 124 187 182 240 7.30e-12 65.9
Msa1130630 AT2G25000.3 44.776 67 35 1 123 189 123 187 7.41e-12 64.7
Msa1130630 AT5G01900.1 43.750 64 36 0 126 189 111 174 7.52e-12 65.1
Msa1130630 AT2G25000.1 44.776 67 35 1 123 189 144 208 8.30e-12 65.1
Msa1130630 AT1G13960.1 46.875 64 30 2 125 188 229 288 8.31e-12 66.2
Msa1130630 AT1G13960.1 47.458 59 28 1 124 182 408 463 9.52e-12 65.9
Msa1130630 AT4G26440.1 48.571 70 30 3 125 194 178 241 9.13e-12 66.2
Msa1130630 AT4G26440.1 46.269 67 33 1 124 190 371 434 2.09e-11 65.1
Msa1130630 AT3G01080.3 48.438 64 29 2 125 188 205 264 9.24e-12 65.5
Msa1130630 AT2G03340.1 45.455 66 32 2 125 190 250 311 1.17e-11 65.9
Msa1130630 AT2G03340.1 43.284 67 35 1 124 190 414 477 1.72e-11 65.1
Msa1130630 AT1G13960.2 47.458 59 28 1 124 182 255 310 1.25e-11 65.1
Msa1130630 AT1G13960.2 46.875 64 30 2 125 188 76 135 1.32e-11 65.1
Msa1130630 AT3G01080.2 48.438 64 29 2 125 188 205 264 1.28e-11 65.5
Msa1130630 AT3G01080.1 46.970 66 31 2 125 190 167 228 1.50e-11 65.1
Msa1130630 AT2G04880.1 44.304 79 36 4 119 197 105 175 2.03e-11 65.1
Msa1130630 AT2G04880.1 40.299 67 37 1 124 190 306 369 4.36e-11 63.9
Msa1130630 AT2G04880.2 44.304 79 36 4 119 197 105 175 2.18e-11 64.7
Msa1130630 AT2G04880.2 40.299 67 37 1 124 190 282 345 3.84e-11 63.9
Msa1130630 AT4G01720.1 37.963 108 60 4 81 187 196 297 2.85e-11 64.3
Msa1130630 AT5G45050.4 39.759 83 46 2 108 190 1026 1104 3.40e-11 64.7
Msa1130630 AT5G45050.1 42.500 80 40 3 108 187 1165 1238 3.41e-11 64.7
Msa1130630 AT5G45050.2 42.500 80 40 3 108 187 1137 1210 3.46e-11 64.7
Msa1130630 AT4G39410.1 41.667 84 45 2 99 182 198 277 3.47e-11 63.5
Msa1130630 AT2G21900.1 40.299 67 37 1 123 189 107 170 4.31e-11 62.0
Msa1130630 AT2G40740.2 45.902 61 33 0 145 205 149 209 4.47e-11 62.4
Msa1130630 AT5G07100.1 47.458 59 28 1 124 182 233 288 4.61e-11 63.2
Msa1130630 AT5G07100.1 42.857 70 35 2 125 194 117 181 9.70e-11 62.0
Msa1130630 AT5G07100.2 47.458 59 28 1 124 182 140 195 4.83e-11 62.0
Msa1130630 AT5G07100.2 42.857 70 35 2 125 194 24 88 7.96e-11 61.2
Msa1130630 AT5G07100.4 47.458 59 28 1 124 182 140 195 4.83e-11 62.0
Msa1130630 AT5G07100.4 42.857 70 35 2 125 194 24 88 7.96e-11 61.2
Msa1130630 AT5G07100.5 47.458 59 28 1 124 182 140 195 4.83e-11 62.0
Msa1130630 AT5G07100.5 42.857 70 35 2 125 194 24 88 7.96e-11 61.2
Msa1130630 AT5G07100.3 47.458 59 28 1 124 182 140 195 4.83e-11 62.0
Msa1130630 AT5G07100.3 42.857 70 35 2 125 194 24 88 7.96e-11 61.2

Find 73 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTATGATGACCTCACTTT+TGG 0.188414 7_3:-82790544 None:intergenic
TCAACATAGTAAGTGCTTTC+TGG 0.207919 7_3:-82790446 None:intergenic
TCCCTCAAAGTTAAAGATAA+AGG 0.227041 7_3:+82791728 Msa1130630:CDS
CTCAAGCTAAGCCTTTAAAA+AGG 0.231958 7_3:+82791700 Msa1130630:CDS
ATTCTGAAGTTGGTCCATTT+TGG 0.232813 7_3:-82791982 None:intergenic
CAAGAATTCATTGGTTTCAT+TGG 0.239108 7_3:-82790400 None:intergenic
TTCACTTGTTCCTTCCATTT+AGG 0.269402 7_3:-82790900 None:intergenic
CATTGGATGATATAATTATA+TGG 0.275590 7_3:-82790383 None:intergenic
AGGATTATCTGAAGGGTCTT+TGG 0.285031 7_3:+82790938 Msa1130630:CDS
CCGAGGGAAAATACCCTCTT+TGG 0.291656 7_3:-82791862 None:intergenic
CTTTCCTTGGATTAATTCAT+TGG 0.302740 7_3:-82790337 None:intergenic
CCCTCAAAGTTAAAGATAAA+GGG 0.333691 7_3:+82791729 Msa1130630:CDS
CCCTTTATCTTTAACTTTGA+GGG 0.337711 7_3:-82791729 None:intergenic
GCAGAAAGAGCATGCCTAAA+TGG 0.338464 7_3:+82790886 Msa1130630:intron
TATGGTCAAAAGGATATTCT+TGG 0.360560 7_3:+82790984 Msa1130630:CDS
TTGTAAAATGATAATGAAGA+TGG 0.362503 7_3:-82790274 None:intergenic
GAATATAGCTGGAGAAAATA+TGG 0.367378 7_3:+82790966 Msa1130630:CDS
GCCCTTTATCTTTAACTTTG+AGG 0.367772 7_3:-82791730 None:intergenic
TTTGAACCTGCTTTGTTGCT+AGG 0.370195 7_3:-82791614 None:intergenic
TCATAACTTACCTAAACTTT+GGG 0.374858 7_3:+82792027 Msa1130630:CDS
TAAGTTACCTCAATTATTGT+TGG 0.376442 7_3:-82791651 None:intergenic
TTCATAACTTACCTAAACTT+TGG 0.377453 7_3:+82792026 Msa1130630:CDS
TGCAATGGATTATGCCAAAA+TGG 0.398708 7_3:+82791968 Msa1130630:CDS
GTCCATTGGACCCAAAGTTT+AGG 0.402633 7_3:-82792037 None:intergenic
TTTGTCAATCAAGAATTCAT+TGG 0.407531 7_3:-82790409 None:intergenic
GCTTTGCTAACTCCTTTCCT+TGG 0.408135 7_3:-82790350 None:intergenic
ATCATTATCTGATTAGAATC+TGG 0.415401 7_3:-82792070 None:intergenic
GGACTCTCGTTTGTAAAAGA+AGG 0.431784 7_3:-82790522 None:intergenic
GTGATATCAGATTCTGAAGT+TGG 0.434696 7_3:-82791992 None:intergenic
TACAGATGCACACATAGAAA+TGG 0.436912 7_3:+82791582 Msa1130630:CDS
AATGAAGATGGGCACTTAAG+TGG 0.450326 7_3:-82790262 None:intergenic
TACCTAAACTTTGGGTCCAA+TGG 0.456299 7_3:+82792035 Msa1130630:CDS
TTTAACATCAAGTTCTGCCT+TGG 0.466903 7_3:-82791820 None:intergenic
CTGGAGAAAATATGGTCAAA+AGG 0.471109 7_3:+82790974 Msa1130630:CDS
GGAGAGACTAAGACCATTGA+TGG 0.480847 7_3:+82790480 Msa1130630:CDS
GACCATTGATGGTAAAATGA+AGG 0.490394 7_3:+82790491 Msa1130630:CDS
TGTAAAATGATAATGAAGAT+GGG 0.499849 7_3:-82790273 None:intergenic
TCTGATTCAATTGATGGAGA+AGG 0.500124 7_3:-82791894 None:intergenic
ACAATGCTCTCTTCAAGAAA+AGG 0.501466 7_3:+82790580 Msa1130630:CDS
CTTTGGATGATGAATATAGC+TGG 0.515960 7_3:+82790955 Msa1130630:CDS
ATCAGAAAATGAGATAATGA+TGG 0.516212 7_3:+82791911 Msa1130630:CDS
GAGCATTGTGGTTAAACTCC+TGG 0.533299 7_3:-82790566 None:intergenic
TGAAGATCCAACAATAATTG+AGG 0.540253 7_3:+82791644 Msa1130630:CDS
CTGGTGAGAAATATGTCCAT+TGG 0.541345 7_3:-82792051 None:intergenic
AGAGACTAGTTTCACTTCCA+AGG 0.541625 7_3:+82791803 Msa1130630:CDS
CAGAGGAGTTGCTTAGTGAA+AGG 0.561520 7_3:-82790210 None:intergenic
GCACTTAAGTGGAGTAATGA+AGG 0.561732 7_3:-82790251 None:intergenic
TAGCAACAAAGCAGGTTCAA+AGG 0.565187 7_3:+82791616 Msa1130630:CDS
CATAGTAAGTGCTTTCTGGT+AGG 0.575281 7_3:-82790442 None:intergenic
ATCTGATATCACTGATACAG+TGG 0.580572 7_3:+82792003 Msa1130630:CDS
CAATGAATTAATCCAAGGAA+AGG 0.585373 7_3:+82790338 Msa1130630:CDS
CTTACTATGTTGAATGTGAG+AGG 0.591736 7_3:+82790456 Msa1130630:CDS
TCAGAATATCAATGCTGCAA+TGG 0.598530 7_3:+82791953 Msa1130630:CDS
GAGTGTGAAATAATAGACAG+AGG 0.601050 7_3:-82790227 None:intergenic
AAAGAGCATGCCTAAATGGA+AGG 0.601574 7_3:+82790890 Msa1130630:CDS
GTGAAGATTTGCACAAACAC+AGG 0.602509 7_3:+82790918 Msa1130630:CDS
ATAACCAATGAATTAATCCA+AGG 0.604601 7_3:+82790333 Msa1130630:CDS
GAGAAGGAAAACAAAACCGA+GGG 0.610739 7_3:-82791878 None:intergenic
AGGGTGCCTAGCAACAAAGC+AGG 0.623925 7_3:+82791608 Msa1130630:CDS
ACAAACACAGGATTATCTGA+AGG 0.625241 7_3:+82790930 Msa1130630:CDS
TAGTGAAAGGTGAGACGAAG+GGG 0.627360 7_3:-82790197 None:intergenic
AAGTGAGGTCATCATAGACC+AGG 0.627405 7_3:+82790548 Msa1130630:CDS
CTTAGTGAAAGGTGAGACGA+AGG 0.627674 7_3:-82790199 None:intergenic
CAAACACAGGATTATCTGAA+GGG 0.645284 7_3:+82790931 Msa1130630:CDS
AAACGAGAGTCCCAAAAGTG+AGG 0.654222 7_3:+82790533 Msa1130630:CDS
ATAATTGAGGTAACTTACAG+AGG 0.655185 7_3:+82791657 Msa1130630:CDS
GACTTAGAAGAAACCAAAGA+GGG 0.656480 7_3:+82791849 Msa1130630:CDS
GGAGAAGGAAAACAAAACCG+AGG 0.666774 7_3:-82791879 None:intergenic
TTAGTGAAAGGTGAGACGAA+GGG 0.668436 7_3:-82790198 None:intergenic
ACTATGTTGAATGTGAGAGG+AGG 0.670945 7_3:+82790459 Msa1130630:CDS
TGACTTAGAAGAAACCAAAG+AGG 0.672282 7_3:+82791848 Msa1130630:CDS
TGCACACATAGAAATGGACA+AGG 0.697085 7_3:+82791588 Msa1130630:CDS
GCACACATAGAAATGGACAA+GGG 0.758330 7_3:+82791589 Msa1130630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATAATATTTGTTTTAG+TGG + chr7_3:82791084-82791103 Msa1130630:intron 10.0%
!!! ACTTTTTTGTTAAATATTTA+AGG + chr7_3:82791259-82791278 Msa1130630:intron 10.0%
!!! ATTAATAATATTTGTTTTAG+TGG + chr7_3:82791084-82791103 Msa1130630:intron 10.0%
!!! ACTTTTTTGTTAAATATTTA+AGG + chr7_3:82791259-82791278 Msa1130630:intron 10.0%
!!! CATTATCATTTTACAAAAAA+TGG + chr7_3:82790281-82790300 Msa1130630:exon 15.0%
!! CTATGTTAATAAAAAAGTTA+AGG - chr7_3:82790681-82790700 None:intergenic 15.0%
!! AAATGATACTTGTAATAAAA+CGG + chr7_3:82790755-82790774 Msa1130630:intron 15.0%
!!! ACTAGTATTTGTTAATAATA+AGG + chr7_3:82791333-82791352 Msa1130630:intron 15.0%
!!! AAAATGTTTTCACATTTTAT+TGG + chr7_3:82791540-82791559 Msa1130630:intron 15.0%
!!! CATTATCATTTTACAAAAAA+TGG + chr7_3:82790281-82790300 Msa1130630:exon 15.0%
!! CTATGTTAATAAAAAAGTTA+AGG - chr7_3:82790681-82790700 None:intergenic 15.0%
!! AAATGATACTTGTAATAAAA+CGG + chr7_3:82790755-82790774 Msa1130630:intron 15.0%
!!! ACTAGTATTTGTTAATAATA+AGG + chr7_3:82791333-82791352 Msa1130630:intron 15.0%
!!! AAAATGTTTTCACATTTTAT+TGG + chr7_3:82791540-82791559 Msa1130630:intron 15.0%
!!! TGTAAAATGATAATGAAGAT+GGG - chr7_3:82790276-82790295 None:intergenic 20.0%
!!! TTGTAAAATGATAATGAAGA+TGG - chr7_3:82790277-82790296 None:intergenic 20.0%
!! CATTGGATGATATAATTATA+TGG - chr7_3:82790386-82790405 None:intergenic 20.0%
!! TATGTAATCATTTGAATTTG+TGG + chr7_3:82790862-82790881 Msa1130630:intron 20.0%
!!! ATATTGCTCAACTATTTTTT+TGG + chr7_3:82791220-82791239 Msa1130630:intron 20.0%
!!! TTCAACATTTGTATTGTTTT+CGG + chr7_3:82791432-82791451 Msa1130630:intron 20.0%
!!! TGTAAAATGATAATGAAGAT+GGG - chr7_3:82790276-82790295 None:intergenic 20.0%
!!! TTGTAAAATGATAATGAAGA+TGG - chr7_3:82790277-82790296 None:intergenic 20.0%
!! CATTGGATGATATAATTATA+TGG - chr7_3:82790386-82790405 None:intergenic 20.0%
!! TATGTAATCATTTGAATTTG+TGG + chr7_3:82790862-82790881 Msa1130630:intron 20.0%
!!! ATATTGCTCAACTATTTTTT+TGG + chr7_3:82791220-82791239 Msa1130630:intron 20.0%
!!! TTCAACATTTGTATTGTTTT+CGG + chr7_3:82791432-82791451 Msa1130630:intron 20.0%
! ATAACCAATGAATTAATCCA+AGG + chr7_3:82790333-82790352 Msa1130630:CDS 25.0%
! TTTGTCAATCAAGAATTCAT+TGG - chr7_3:82790412-82790431 None:intergenic 25.0%
!!! AAGCGTTTTGAATTTGATAT+AGG + chr7_3:82791122-82791141 Msa1130630:intron 25.0%
!!! CAATATTGATTTGGTTAACA+TGG - chr7_3:82791206-82791225 None:intergenic 25.0%
!! ATAGTTGAGCAATATTGATT+TGG - chr7_3:82791215-82791234 None:intergenic 25.0%
! ATCTTGAGTAATGAAATAGA+AGG - chr7_3:82791309-82791328 None:intergenic 25.0%
!!! GTTTTCACATTTTATTGGTT+TGG + chr7_3:82791545-82791564 Msa1130630:intron 25.0%
! TAAGTTACCTCAATTATTGT+TGG - chr7_3:82791654-82791673 None:intergenic 25.0%
!! TCATTTTCTGATTCAATTGA+TGG - chr7_3:82791903-82791922 None:intergenic 25.0%
! ATCAGAAAATGAGATAATGA+TGG + chr7_3:82791911-82791930 Msa1130630:CDS 25.0%
!!! AATGATGGAATCAAACTTTT+TGG + chr7_3:82791926-82791945 Msa1130630:CDS 25.0%
! TTCATAACTTACCTAAACTT+TGG + chr7_3:82792026-82792045 Msa1130630:CDS 25.0%
! TCATAACTTACCTAAACTTT+GGG + chr7_3:82792027-82792046 Msa1130630:CDS 25.0%
! ATAACCAATGAATTAATCCA+AGG + chr7_3:82790333-82790352 Msa1130630:CDS 25.0%
! TTTGTCAATCAAGAATTCAT+TGG - chr7_3:82790412-82790431 None:intergenic 25.0%
!!! AAGCGTTTTGAATTTGATAT+AGG + chr7_3:82791122-82791141 Msa1130630:intron 25.0%
!!! CAATATTGATTTGGTTAACA+TGG - chr7_3:82791206-82791225 None:intergenic 25.0%
!! ATAGTTGAGCAATATTGATT+TGG - chr7_3:82791215-82791234 None:intergenic 25.0%
! ATCTTGAGTAATGAAATAGA+AGG - chr7_3:82791309-82791328 None:intergenic 25.0%
!!! GTTTTCACATTTTATTGGTT+TGG + chr7_3:82791545-82791564 Msa1130630:intron 25.0%
! TAAGTTACCTCAATTATTGT+TGG - chr7_3:82791654-82791673 None:intergenic 25.0%
!! TCATTTTCTGATTCAATTGA+TGG - chr7_3:82791903-82791922 None:intergenic 25.0%
! ATCAGAAAATGAGATAATGA+TGG + chr7_3:82791911-82791930 Msa1130630:CDS 25.0%
!!! AATGATGGAATCAAACTTTT+TGG + chr7_3:82791926-82791945 Msa1130630:CDS 25.0%
! TTCATAACTTACCTAAACTT+TGG + chr7_3:82792026-82792045 Msa1130630:CDS 25.0%
! TCATAACTTACCTAAACTTT+GGG + chr7_3:82792027-82792046 Msa1130630:CDS 25.0%
CTTTCCTTGGATTAATTCAT+TGG - chr7_3:82790340-82790359 None:intergenic 30.0%
CAATGAATTAATCCAAGGAA+AGG + chr7_3:82790338-82790357 Msa1130630:CDS 30.0%
!! CAAGAATTCATTGGTTTCAT+TGG - chr7_3:82790403-82790422 None:intergenic 30.0%
! ATCCTTCATTTTACCATCAA+TGG - chr7_3:82790496-82790515 None:intergenic 30.0%
GAATATAGCTGGAGAAAATA+TGG + chr7_3:82790966-82790985 Msa1130630:CDS 30.0%
TATGGTCAAAAGGATATTCT+TGG + chr7_3:82790984-82791003 Msa1130630:CDS 30.0%
! AGAAGACAAAGTGCTTATTA+AGG + chr7_3:82791382-82791401 Msa1130630:intron 30.0%
TGAAGATCCAACAATAATTG+AGG + chr7_3:82791644-82791663 Msa1130630:CDS 30.0%
ATAATTGAGGTAACTTACAG+AGG + chr7_3:82791657-82791676 Msa1130630:CDS 30.0%
! TCAAGCTAAGCCTTTAAAAA+GGG + chr7_3:82791701-82791720 Msa1130630:CDS 30.0%
TCCCTCAAAGTTAAAGATAA+AGG + chr7_3:82791728-82791747 Msa1130630:CDS 30.0%
! CCCTTTATCTTTAACTTTGA+GGG - chr7_3:82791732-82791751 None:intergenic 30.0%
CCCTCAAAGTTAAAGATAAA+GGG + chr7_3:82791729-82791748 Msa1130630:CDS 30.0%
CTTTCCTTGGATTAATTCAT+TGG - chr7_3:82790340-82790359 None:intergenic 30.0%
CAATGAATTAATCCAAGGAA+AGG + chr7_3:82790338-82790357 Msa1130630:CDS 30.0%
!! CAAGAATTCATTGGTTTCAT+TGG - chr7_3:82790403-82790422 None:intergenic 30.0%
! ATCCTTCATTTTACCATCAA+TGG - chr7_3:82790496-82790515 None:intergenic 30.0%
GAATATAGCTGGAGAAAATA+TGG + chr7_3:82790966-82790985 Msa1130630:CDS 30.0%
TATGGTCAAAAGGATATTCT+TGG + chr7_3:82790984-82791003 Msa1130630:CDS 30.0%
! AGAAGACAAAGTGCTTATTA+AGG + chr7_3:82791382-82791401 Msa1130630:intron 30.0%
TGAAGATCCAACAATAATTG+AGG + chr7_3:82791644-82791663 Msa1130630:CDS 30.0%
ATAATTGAGGTAACTTACAG+AGG + chr7_3:82791657-82791676 Msa1130630:CDS 30.0%
! TCAAGCTAAGCCTTTAAAAA+GGG + chr7_3:82791701-82791720 Msa1130630:CDS 30.0%
TCCCTCAAAGTTAAAGATAA+AGG + chr7_3:82791728-82791747 Msa1130630:CDS 30.0%
! CCCTTTATCTTTAACTTTGA+GGG - chr7_3:82791732-82791751 None:intergenic 30.0%
CCCTCAAAGTTAAAGATAAA+GGG + chr7_3:82791729-82791748 Msa1130630:CDS 30.0%
GAGTGTGAAATAATAGACAG+AGG - chr7_3:82790230-82790249 None:intergenic 35.0%
TCAACATAGTAAGTGCTTTC+TGG - chr7_3:82790449-82790468 None:intergenic 35.0%
CTTACTATGTTGAATGTGAG+AGG + chr7_3:82790456-82790475 Msa1130630:CDS 35.0%
! GACCATTGATGGTAAAATGA+AGG + chr7_3:82790491-82790510 Msa1130630:CDS 35.0%
!! TCTATGATGACCTCACTTTT+GGG - chr7_3:82790546-82790565 None:intergenic 35.0%
!!! TTTTCTTGAAGAGAGCATTG+TGG - chr7_3:82790581-82790600 None:intergenic 35.0%
ACAATGCTCTCTTCAAGAAA+AGG + chr7_3:82790580-82790599 Msa1130630:CDS 35.0%
TTCATGTGTGTGAATTGTCA+AGG + chr7_3:82790811-82790830 Msa1130630:intron 35.0%
ACTGAAATACGTTCAAGCTA+GGG - chr7_3:82790843-82790862 None:intergenic 35.0%
TACTGAAATACGTTCAAGCT+AGG - chr7_3:82790844-82790863 None:intergenic 35.0%
TTCACTTGTTCCTTCCATTT+AGG - chr7_3:82790903-82790922 None:intergenic 35.0%
ACAAACACAGGATTATCTGA+AGG + chr7_3:82790930-82790949 Msa1130630:CDS 35.0%
CAAACACAGGATTATCTGAA+GGG + chr7_3:82790931-82790950 Msa1130630:CDS 35.0%
CTTTGGATGATGAATATAGC+TGG + chr7_3:82790955-82790974 Msa1130630:CDS 35.0%
CTGGAGAAAATATGGTCAAA+AGG + chr7_3:82790974-82790993 Msa1130630:CDS 35.0%
! TTCTTGGAGCTAAGTTTTCA+AGG + chr7_3:82791000-82791019 Msa1130630:CDS 35.0%
GGTTAACATGGCTAAAAACA+GGG - chr7_3:82791194-82791213 None:intergenic 35.0%
TGGTTAACATGGCTAAAAAC+AGG - chr7_3:82791195-82791214 None:intergenic 35.0%
!! TTTATTGGTTTGGATTGCAG+AGG + chr7_3:82791555-82791574 Msa1130630:intron 35.0%
TACAGATGCACACATAGAAA+TGG + chr7_3:82791582-82791601 Msa1130630:CDS 35.0%
!! CTTTTTAAAGGCTTAGCTTG+AGG - chr7_3:82791702-82791721 None:intergenic 35.0%
! CTCAAGCTAAGCCTTTAAAA+AGG + chr7_3:82791700-82791719 Msa1130630:CDS 35.0%
! GAGGGAAATTCCCTTTTTAA+AGG - chr7_3:82791714-82791733 None:intergenic 35.0%
! GCCCTTTATCTTTAACTTTG+AGG - chr7_3:82791733-82791752 None:intergenic 35.0%
TTTAACATCAAGTTCTGCCT+TGG - chr7_3:82791823-82791842 None:intergenic 35.0%
TGACTTAGAAGAAACCAAAG+AGG + chr7_3:82791848-82791867 Msa1130630:CDS 35.0%
GACTTAGAAGAAACCAAAGA+GGG + chr7_3:82791849-82791868 Msa1130630:CDS 35.0%
TCTGATTCAATTGATGGAGA+AGG - chr7_3:82791897-82791916 None:intergenic 35.0%
TCAGAATATCAATGCTGCAA+TGG + chr7_3:82791953-82791972 Msa1130630:CDS 35.0%
!! TGCAATGGATTATGCCAAAA+TGG + chr7_3:82791968-82791987 Msa1130630:CDS 35.0%
!!! ATTCTGAAGTTGGTCCATTT+TGG - chr7_3:82791985-82792004 None:intergenic 35.0%
!! GTGATATCAGATTCTGAAGT+TGG - chr7_3:82791995-82792014 None:intergenic 35.0%
ATCTGATATCACTGATACAG+TGG + chr7_3:82792003-82792022 Msa1130630:CDS 35.0%
GAGTGTGAAATAATAGACAG+AGG - chr7_3:82790230-82790249 None:intergenic 35.0%
TCAACATAGTAAGTGCTTTC+TGG - chr7_3:82790449-82790468 None:intergenic 35.0%
CTTACTATGTTGAATGTGAG+AGG + chr7_3:82790456-82790475 Msa1130630:CDS 35.0%
! GACCATTGATGGTAAAATGA+AGG + chr7_3:82790491-82790510 Msa1130630:CDS 35.0%
!! TCTATGATGACCTCACTTTT+GGG - chr7_3:82790546-82790565 None:intergenic 35.0%
!!! TTTTCTTGAAGAGAGCATTG+TGG - chr7_3:82790581-82790600 None:intergenic 35.0%
ACAATGCTCTCTTCAAGAAA+AGG + chr7_3:82790580-82790599 Msa1130630:CDS 35.0%
TTCATGTGTGTGAATTGTCA+AGG + chr7_3:82790811-82790830 Msa1130630:intron 35.0%
ACTGAAATACGTTCAAGCTA+GGG - chr7_3:82790843-82790862 None:intergenic 35.0%
TACTGAAATACGTTCAAGCT+AGG - chr7_3:82790844-82790863 None:intergenic 35.0%
TTCACTTGTTCCTTCCATTT+AGG - chr7_3:82790903-82790922 None:intergenic 35.0%
ACAAACACAGGATTATCTGA+AGG + chr7_3:82790930-82790949 Msa1130630:CDS 35.0%
CAAACACAGGATTATCTGAA+GGG + chr7_3:82790931-82790950 Msa1130630:CDS 35.0%
CTTTGGATGATGAATATAGC+TGG + chr7_3:82790955-82790974 Msa1130630:CDS 35.0%
CTGGAGAAAATATGGTCAAA+AGG + chr7_3:82790974-82790993 Msa1130630:CDS 35.0%
! TTCTTGGAGCTAAGTTTTCA+AGG + chr7_3:82791000-82791019 Msa1130630:CDS 35.0%
GGTTAACATGGCTAAAAACA+GGG - chr7_3:82791194-82791213 None:intergenic 35.0%
TGGTTAACATGGCTAAAAAC+AGG - chr7_3:82791195-82791214 None:intergenic 35.0%
!! TTTATTGGTTTGGATTGCAG+AGG + chr7_3:82791555-82791574 Msa1130630:intron 35.0%
TACAGATGCACACATAGAAA+TGG + chr7_3:82791582-82791601 Msa1130630:CDS 35.0%
!! CTTTTTAAAGGCTTAGCTTG+AGG - chr7_3:82791702-82791721 None:intergenic 35.0%
! CTCAAGCTAAGCCTTTAAAA+AGG + chr7_3:82791700-82791719 Msa1130630:CDS 35.0%
! GAGGGAAATTCCCTTTTTAA+AGG - chr7_3:82791714-82791733 None:intergenic 35.0%
! GCCCTTTATCTTTAACTTTG+AGG - chr7_3:82791733-82791752 None:intergenic 35.0%
TTTAACATCAAGTTCTGCCT+TGG - chr7_3:82791823-82791842 None:intergenic 35.0%
TGACTTAGAAGAAACCAAAG+AGG + chr7_3:82791848-82791867 Msa1130630:CDS 35.0%
GACTTAGAAGAAACCAAAGA+GGG + chr7_3:82791849-82791868 Msa1130630:CDS 35.0%
TCTGATTCAATTGATGGAGA+AGG - chr7_3:82791897-82791916 None:intergenic 35.0%
TCAGAATATCAATGCTGCAA+TGG + chr7_3:82791953-82791972 Msa1130630:CDS 35.0%
!! TGCAATGGATTATGCCAAAA+TGG + chr7_3:82791968-82791987 Msa1130630:CDS 35.0%
!!! ATTCTGAAGTTGGTCCATTT+TGG - chr7_3:82791985-82792004 None:intergenic 35.0%
!! GTGATATCAGATTCTGAAGT+TGG - chr7_3:82791995-82792014 None:intergenic 35.0%
ATCTGATATCACTGATACAG+TGG + chr7_3:82792003-82792022 Msa1130630:CDS 35.0%
TTAGTGAAAGGTGAGACGAA+GGG - chr7_3:82790201-82790220 None:intergenic 40.0%
GCACTTAAGTGGAGTAATGA+AGG - chr7_3:82790254-82790273 None:intergenic 40.0%
AATGAAGATGGGCACTTAAG+TGG - chr7_3:82790265-82790284 None:intergenic 40.0%
! CATAGTAAGTGCTTTCTGGT+AGG - chr7_3:82790445-82790464 None:intergenic 40.0%
ACTATGTTGAATGTGAGAGG+AGG + chr7_3:82790459-82790478 Msa1130630:CDS 40.0%
GGACTCTCGTTTGTAAAAGA+AGG - chr7_3:82790525-82790544 None:intergenic 40.0%
! GTCTATGATGACCTCACTTT+TGG - chr7_3:82790547-82790566 None:intergenic 40.0%
TGTGTGAATTGTCAAGGTCA+AGG + chr7_3:82790817-82790836 Msa1130630:intron 40.0%
! AAAGAGCATGCCTAAATGGA+AGG + chr7_3:82790890-82790909 Msa1130630:CDS 40.0%
GTGAAGATTTGCACAAACAC+AGG + chr7_3:82790918-82790937 Msa1130630:CDS 40.0%
AGGATTATCTGAAGGGTCTT+TGG + chr7_3:82790938-82790957 Msa1130630:CDS 40.0%
TGTAAGCATCTTAGTGTCAC+AGG + chr7_3:82791152-82791171 Msa1130630:intron 40.0%
TGCACACATAGAAATGGACA+AGG + chr7_3:82791588-82791607 Msa1130630:CDS 40.0%
GCACACATAGAAATGGACAA+GGG + chr7_3:82791589-82791608 Msa1130630:CDS 40.0%
! TTTGAACCTGCTTTGTTGCT+AGG - chr7_3:82791617-82791636 None:intergenic 40.0%
TAGCAACAAAGCAGGTTCAA+AGG + chr7_3:82791616-82791635 Msa1130630:CDS 40.0%
!! AGAGACTAGTTTCACTTCCA+AGG + chr7_3:82791803-82791822 Msa1130630:CDS 40.0%
GAGAAGGAAAACAAAACCGA+GGG - chr7_3:82791881-82791900 None:intergenic 40.0%
TACCTAAACTTTGGGTCCAA+TGG + chr7_3:82792035-82792054 Msa1130630:CDS 40.0%
CTGGTGAGAAATATGTCCAT+TGG - chr7_3:82792054-82792073 None:intergenic 40.0%
TTAGTGAAAGGTGAGACGAA+GGG - chr7_3:82790201-82790220 None:intergenic 40.0%
GCACTTAAGTGGAGTAATGA+AGG - chr7_3:82790254-82790273 None:intergenic 40.0%
AATGAAGATGGGCACTTAAG+TGG - chr7_3:82790265-82790284 None:intergenic 40.0%
! CATAGTAAGTGCTTTCTGGT+AGG - chr7_3:82790445-82790464 None:intergenic 40.0%
ACTATGTTGAATGTGAGAGG+AGG + chr7_3:82790459-82790478 Msa1130630:CDS 40.0%
GGACTCTCGTTTGTAAAAGA+AGG - chr7_3:82790525-82790544 None:intergenic 40.0%
! GTCTATGATGACCTCACTTT+TGG - chr7_3:82790547-82790566 None:intergenic 40.0%
TGTGTGAATTGTCAAGGTCA+AGG + chr7_3:82790817-82790836 Msa1130630:intron 40.0%
! AAAGAGCATGCCTAAATGGA+AGG + chr7_3:82790890-82790909 Msa1130630:CDS 40.0%
GTGAAGATTTGCACAAACAC+AGG + chr7_3:82790918-82790937 Msa1130630:CDS 40.0%
AGGATTATCTGAAGGGTCTT+TGG + chr7_3:82790938-82790957 Msa1130630:CDS 40.0%
TGTAAGCATCTTAGTGTCAC+AGG + chr7_3:82791152-82791171 Msa1130630:intron 40.0%
TGCACACATAGAAATGGACA+AGG + chr7_3:82791588-82791607 Msa1130630:CDS 40.0%
GCACACATAGAAATGGACAA+GGG + chr7_3:82791589-82791608 Msa1130630:CDS 40.0%
! TTTGAACCTGCTTTGTTGCT+AGG - chr7_3:82791617-82791636 None:intergenic 40.0%
TAGCAACAAAGCAGGTTCAA+AGG + chr7_3:82791616-82791635 Msa1130630:CDS 40.0%
!! AGAGACTAGTTTCACTTCCA+AGG + chr7_3:82791803-82791822 Msa1130630:CDS 40.0%
GAGAAGGAAAACAAAACCGA+GGG - chr7_3:82791881-82791900 None:intergenic 40.0%
TACCTAAACTTTGGGTCCAA+TGG + chr7_3:82792035-82792054 Msa1130630:CDS 40.0%
CTGGTGAGAAATATGTCCAT+TGG - chr7_3:82792054-82792073 None:intergenic 40.0%
TAGTGAAAGGTGAGACGAAG+GGG - chr7_3:82790200-82790219 None:intergenic 45.0%
CTTAGTGAAAGGTGAGACGA+AGG - chr7_3:82790202-82790221 None:intergenic 45.0%
CAGAGGAGTTGCTTAGTGAA+AGG - chr7_3:82790213-82790232 None:intergenic 45.0%
GCTTTGCTAACTCCTTTCCT+TGG - chr7_3:82790353-82790372 None:intergenic 45.0%
GGAGAGACTAAGACCATTGA+TGG + chr7_3:82790480-82790499 Msa1130630:CDS 45.0%
AAACGAGAGTCCCAAAAGTG+AGG + chr7_3:82790533-82790552 Msa1130630:CDS 45.0%
AAGTGAGGTCATCATAGACC+AGG + chr7_3:82790548-82790567 Msa1130630:CDS 45.0%
! GAGCATTGTGGTTAAACTCC+TGG - chr7_3:82790569-82790588 None:intergenic 45.0%
! GCAGAAAGAGCATGCCTAAA+TGG + chr7_3:82790886-82790905 Msa1130630:intron 45.0%
!!! CCAAAGAGGGTATTTTCCCT+CGG + chr7_3:82791862-82791881 Msa1130630:CDS 45.0%
GGAGAAGGAAAACAAAACCG+AGG - chr7_3:82791882-82791901 None:intergenic 45.0%
GTCCATTGGACCCAAAGTTT+AGG - chr7_3:82792040-82792059 None:intergenic 45.0%
TAGTGAAAGGTGAGACGAAG+GGG - chr7_3:82790200-82790219 None:intergenic 45.0%
CTTAGTGAAAGGTGAGACGA+AGG - chr7_3:82790202-82790221 None:intergenic 45.0%
CAGAGGAGTTGCTTAGTGAA+AGG - chr7_3:82790213-82790232 None:intergenic 45.0%
GCTTTGCTAACTCCTTTCCT+TGG - chr7_3:82790353-82790372 None:intergenic 45.0%
GGAGAGACTAAGACCATTGA+TGG + chr7_3:82790480-82790499 Msa1130630:CDS 45.0%
AAACGAGAGTCCCAAAAGTG+AGG + chr7_3:82790533-82790552 Msa1130630:CDS 45.0%
AAGTGAGGTCATCATAGACC+AGG + chr7_3:82790548-82790567 Msa1130630:CDS 45.0%
! GAGCATTGTGGTTAAACTCC+TGG - chr7_3:82790569-82790588 None:intergenic 45.0%
! GCAGAAAGAGCATGCCTAAA+TGG + chr7_3:82790886-82790905 Msa1130630:intron 45.0%
!!! CCAAAGAGGGTATTTTCCCT+CGG + chr7_3:82791862-82791881 Msa1130630:CDS 45.0%
GGAGAAGGAAAACAAAACCG+AGG - chr7_3:82791882-82791901 None:intergenic 45.0%
GTCCATTGGACCCAAAGTTT+AGG - chr7_3:82792040-82792059 None:intergenic 45.0%
CCGAGGGAAAATACCCTCTT+TGG - chr7_3:82791865-82791884 None:intergenic 50.0%
CCGAGGGAAAATACCCTCTT+TGG - chr7_3:82791865-82791884 None:intergenic 50.0%
! AGGGTGCCTAGCAACAAAGC+AGG + chr7_3:82791608-82791627 Msa1130630:CDS 55.0%
! AGGGTGCCTAGCAACAAAGC+AGG + chr7_3:82791608-82791627 Msa1130630:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 82790196 82792088 82790196 ID=Msa1130630;Name=Msa1130630
chr7_3 mRNA 82790196 82792088 82790196 ID=Msa1130630-mRNA-1;Parent=Msa1130630;Name=Msa1130630-mRNA-1;_AED=0.23;_eAED=0.22;_QI=104|1|0.66|1|1|1|3|0|315
chr7_3 exon 82790196 82790601 82790196 ID=Msa1130630-mRNA-1:exon:24518;Parent=Msa1130630-mRNA-1
chr7_3 exon 82790890 82791021 82790890 ID=Msa1130630-mRNA-1:exon:24519;Parent=Msa1130630-mRNA-1
chr7_3 exon 82791575 82792088 82791575 ID=Msa1130630-mRNA-1:exon:24520;Parent=Msa1130630-mRNA-1
chr7_3 five_prime_UTR 82790196 82790299 82790196 ID=Msa1130630-mRNA-1:five_prime_utr;Parent=Msa1130630-mRNA-1
chr7_3 CDS 82790300 82790601 82790300 ID=Msa1130630-mRNA-1:cds;Parent=Msa1130630-mRNA-1
chr7_3 CDS 82790890 82791021 82790890 ID=Msa1130630-mRNA-1:cds;Parent=Msa1130630-mRNA-1
chr7_3 CDS 82791575 82792088 82791575 ID=Msa1130630-mRNA-1:cds;Parent=Msa1130630-mRNA-1
Gene Sequence

>Msa1130630

ATGGAAGAGACTACAAAGAGAAAACGTGTTAGTATAACCAATGAATTAATCCAAGGAAAGGAGTTAGCAAAGCAGCTAAGTAACCATATAATTATATCATCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCAACCTACCAGAAAGCACTTACTATGTTGAATGTGAGAGGAGGAGAGACTAAGACCATTGATGGTAAAATGAAGGATTCTCATCCTTCTTTTACAAACGAGAGTCCCAAAAGTGAGGTCATCATAGACCAGGAGTTTAACCACAATGCTCTCTTCAAGAAAAGAAAGAGCATGCCTAAATGGAAGGAACAAGTGAAGATTTGCACAAACACAGGATTATCTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTACAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAGGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTAACTTACAGAGGAAGACACACATGCACTCATCCTCAAGCTAAGCCTTTAAAAAGGGAATTTCCCTCAAAGTTAAAGATAAAGGGCTTAGAGAAAAATAAACTTCACAATGATAAAAAGAATCAACTACAAACTCAAGAGACTAGTTTCACTTCCAAGGCAGAACTTGATGTTAAAAGAAATGACTTAGAAGAAACCAAAGAGGGTATTTTCCCTCGGTTTTGTTTTCCTTCTCCATCAATTGAATCAGAAAATGAGATAATGATGGAATCAAACTTTTTGGTTTGTCAGAATATCAATGCTGCAATGGATTATGCCAAAATGGACCAACTTCAGAATCTGATATCACTGATACAGTGGTTCATAACTTACCTAAACTTTGGGTCCAATGGACATATTTCTCACCAGATTCTAATCAGATAA
Protein sequence

>Msa1130630

MEETTKRKRVSITNELIQGKELAKQLSNHIIISSNETNEFLIDKIISTYQKALTMLNVRGGETKTIDGKMKDSHPSFTNESPKSEVIIDQEFNHNALFKKRKSMPKWKEQVKICTNTGLSEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHPQAKPLKREFPSKLKIKGLEKNKLHNDKKNQLQTQETSFTSKAELDVKRNDLEETKEGIFPRFCFPSPSIESENEIMMESNFLVCQNINAAMDYAKMDQLQNLISLIQWFITYLNFGSNGHISHQILIR*