AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0437330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437330 MtrunA17_Chr7g0275531 90.119 253 16 2 1 251 1 246 4.45e-164 457
Msa0437330 MtrunA17_Chr8g0347251 46.816 267 109 8 1 251 1 250 3.60e-64 204
Msa0437330 MtrunA17_Chr3g0126391 53.125 192 67 9 12 185 7 193 7.84e-55 179
Msa0437330 MtrunA17_Chr8g0387981 44.103 195 98 5 1 186 1 193 6.49e-43 149
Msa0437330 MtrunA17_Chr7g0244981 33.500 200 108 5 9 198 11 195 4.81e-26 103
Msa0437330 MtrunA17_Chr7g0244971 32.275 189 97 5 9 184 12 182 5.24e-25 100
Msa0437330 MtrunA17_Chr8g0334541 36.364 176 85 5 15 184 8 162 2.08e-24 98.6
Msa0437330 MtrunA17_Chr2g0315371 31.313 198 100 6 11 184 15 200 2.92e-21 90.5
Msa0437330 MtrunA17_Chr8g0350621 30.556 180 96 7 15 184 10 170 1.71e-20 87.8
Msa0437330 MtrunA17_Chr5g0428351 31.892 185 101 6 7 189 87 248 9.38e-20 86.7
Msa0437330 MtrunA17_Chr3g0128671 31.492 181 93 5 18 184 23 186 1.23e-19 86.3
Msa0437330 MtrunA17_Chr2g0315381 45.349 86 37 2 100 184 127 203 5.43e-19 84.7
Msa0437330 MtrunA17_Chr2g0315361 45.349 86 38 2 99 184 131 207 8.45e-18 81.3
Msa0437330 MtrunA17_Chr1g0147881 43.529 85 44 2 98 182 237 317 8.97e-17 78.6
Msa0437330 MtrunA17_Chr7g0270051 40.870 115 63 3 78 189 3 115 1.64e-16 77.0
Msa0437330 MtrunA17_Chr7g0224801 56.250 64 23 2 124 187 92 150 1.04e-15 72.8
Msa0437330 MtrunA17_Chr4g0071521 32.624 141 72 3 42 182 183 300 1.15e-15 75.5
Msa0437330 MtrunA17_Chr7g0270191 40.594 101 56 2 88 187 107 204 1.49e-15 74.7
Msa0437330 MtrunA17_Chr8g0348311 53.226 62 25 2 126 187 156 213 1.56e-15 75.1
Msa0437330 MtrunA17_Chr8g0387501 47.297 74 33 3 121 194 125 192 1.84e-15 74.3
Msa0437330 MtrunA17_Chr8g0379461 39.796 98 52 2 118 215 69 159 1.96e-15 73.6
Msa0437330 MtrunA17_Chr5g0401821 54.386 57 24 1 126 182 200 254 8.40e-15 72.4
Msa0437330 MtrunA17_Chr7g0248691 51.515 66 26 2 126 191 155 214 1.20e-14 72.4
Msa0437330 MtrunA17_Chr2g0293481 41.748 103 52 4 126 222 268 368 2.25e-14 72.4
Msa0437330 MtrunA17_Chr2g0284321 46.479 71 32 2 126 196 36 100 3.00e-14 69.7
Msa0437330 MtrunA17_Chr2g0319961 50.769 65 30 1 126 190 81 143 4.04e-14 70.1
Msa0437330 MtrunA17_Chr5g0418781 50.000 68 30 2 124 191 123 186 4.12e-14 70.5
Msa0437330 MtrunA17_Chr1g0184691 52.632 57 25 1 126 182 294 348 6.41e-14 70.5
Msa0437330 MtrunA17_Chr4g0053281 50.877 57 26 1 126 182 267 321 1.72e-13 69.3
Msa0437330 MtrunA17_Chr8g0386241 46.269 67 31 2 124 190 102 163 1.84e-13 67.0
Msa0437330 MtrunA17_Chr1g0194481 50.000 64 27 2 124 187 157 215 2.12e-13 68.9
Msa0437330 MtrunA17_Chr7g0228941 52.632 57 25 1 126 182 53 107 2.31e-13 65.5
Msa0437330 MtrunA17_Chr3g0079691 42.308 78 39 3 117 194 272 343 2.98e-13 69.3
Msa0437330 MtrunA17_Chr3g0079691 33.663 101 59 2 124 219 494 591 6.00e-11 62.4
Msa0437330 MtrunA17_Chr4g0042831 43.421 76 32 2 125 200 145 209 3.15e-13 68.9
Msa0437330 MtrunA17_Chr4g0042831 44.776 67 34 1 124 190 277 340 1.00e-11 64.3
Msa0437330 MtrunA17_Chr5g0443131 49.153 59 27 1 124 182 156 211 3.55e-13 68.2
Msa0437330 MtrunA17_Chr4g0051881 47.143 70 32 2 124 193 177 241 3.90e-13 68.2
Msa0437330 MtrunA17_Chr2g0294231 48.438 64 30 1 124 187 202 262 4.04e-13 68.6
Msa0437330 MtrunA17_Chr5g0431811 39.535 86 47 2 125 206 672 756 6.29e-13 68.6
Msa0437330 MtrunA17_Chr7g0238921 49.275 69 28 2 114 182 117 178 6.49e-13 67.4
Msa0437330 MtrunA17_Chr5g0418191 46.269 67 33 1 124 190 319 382 6.94e-13 67.8
Msa0437330 MtrunA17_Chr5g0418191 35.652 115 65 4 125 239 151 256 2.00e-11 63.5
Msa0437330 MtrunA17_Chr7g0263531 31.667 120 78 2 126 245 190 305 9.10e-13 67.4
Msa0437330 MtrunA17_Chr3g0129361 44.444 72 37 1 112 183 131 199 9.49e-13 65.9
Msa0437330 MtrunA17_Chr7g0218081 46.875 64 30 2 125 188 228 287 9.82e-13 67.4
Msa0437330 MtrunA17_Chr7g0218081 44.776 67 34 1 124 190 409 472 2.47e-12 66.2
Msa0437330 MtrunA17_Chr3g0139021 52.632 57 25 1 126 182 315 369 1.32e-12 67.0
Msa0437330 MtrunA17_Chr8g0383351 50.847 59 26 1 124 182 159 214 1.41e-12 65.5
Msa0437330 MtrunA17_Chr1g0202461 44.928 69 32 2 126 194 262 324 1.51e-12 66.6
Msa0437330 MtrunA17_Chr5g0445311 44.776 67 34 1 124 190 363 426 1.52e-12 67.0
Msa0437330 MtrunA17_Chr5g0445311 45.833 72 33 3 123 194 198 263 2.07e-12 66.6
Msa0437330 MtrunA17_Chr3g0101131 47.143 70 31 3 125 194 243 306 1.89e-12 66.6
Msa0437330 MtrunA17_Chr3g0101131 44.776 67 34 1 124 190 414 477 3.52e-12 65.9
Msa0437330 MtrunA17_Chr8g0335811 45.070 71 36 1 112 182 141 208 4.53e-12 63.9
Msa0437330 MtrunA17_Chr4g0068541 45.312 64 32 1 124 187 207 267 4.59e-12 65.5
Msa0437330 MtrunA17_Chr7g0249311 44.615 65 32 2 125 189 179 239 1.00e-11 64.7
Msa0437330 MtrunA17_Chr7g0248721 50.000 64 26 3 124 187 140 197 1.23e-11 62.8
Msa0437330 MtrunA17_Chr2g0322391 48.485 66 32 1 124 189 348 411 2.06e-11 63.5
Msa0437330 MtrunA17_Chr5g0432161 44.776 67 34 1 124 190 420 483 2.25e-11 63.5
Msa0437330 MtrunA17_Chr1g0150281 41.975 81 43 2 112 190 125 203 2.69e-11 62.4
Msa0437330 MtrunA17_Chr3g0106491 43.284 67 35 1 124 190 364 427 4.87e-11 62.4
Msa0437330 MtrunA17_Chr1g0150801 42.424 66 33 2 124 189 101 161 5.23e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437330 AT4G11070.1 49.074 216 81 8 3 195 2 211 1.37e-49 166
Msa0437330 AT4G11070.2 47.959 196 81 6 3 195 2 179 2.84e-45 154
Msa0437330 AT4G23810.1 40.948 232 80 8 11 195 13 234 4.54e-44 152
Msa0437330 AT5G24110.1 42.929 198 90 6 12 209 17 191 1.47e-43 150
Msa0437330 AT2G46400.1 38.462 247 127 7 12 256 8 231 1.06e-38 137
Msa0437330 AT3G56400.1 32.353 204 104 5 3 191 2 186 6.68e-27 106
Msa0437330 AT2G40750.1 28.352 261 151 7 5 233 8 264 6.31e-24 99.0
Msa0437330 AT2G40740.1 48.315 89 46 0 117 205 165 253 3.62e-23 95.9
Msa0437330 AT2G40740.3 48.315 89 46 0 117 205 174 262 3.82e-23 96.3
Msa0437330 AT5G45260.1 49.398 83 35 3 112 194 1198 1273 3.48e-19 87.4
Msa0437330 AT1G66550.1 29.282 181 90 6 16 184 13 167 6.53e-16 75.5
Msa0437330 AT5G52830.1 54.688 64 25 2 126 189 166 225 8.83e-16 76.3
Msa0437330 AT1G29280.1 53.226 62 25 2 126 187 75 132 1.73e-15 74.3
Msa0437330 AT1G66600.1 40.909 88 45 1 104 184 75 162 1.90e-15 73.9
Msa0437330 AT5G49520.1 50.000 64 29 1 124 187 220 280 6.84e-15 73.9
Msa0437330 AT4G31550.2 44.048 84 43 2 99 182 221 300 8.39e-15 73.2
Msa0437330 AT1G66550.2 28.333 180 88 6 16 184 13 162 1.26e-14 72.0
Msa0437330 AT4G31550.1 54.386 57 24 1 126 182 247 301 1.53e-14 72.8
Msa0437330 AT2G30590.1 50.794 63 27 2 126 188 314 372 2.55e-14 72.4
Msa0437330 AT4G01250.1 51.613 62 26 2 126 187 129 186 4.69e-14 70.9
Msa0437330 AT1G30650.1 49.275 69 29 3 126 194 218 280 5.17e-14 71.6
Msa0437330 AT2G34830.1 50.000 62 27 2 126 187 216 273 7.69e-14 71.2
Msa0437330 AT2G34830.2 50.000 62 27 2 126 187 225 282 8.37e-14 70.9
Msa0437330 AT1G66560.1 46.667 60 32 0 125 184 103 162 1.09e-13 69.3
Msa0437330 AT2G24570.1 54.386 57 24 1 126 182 244 298 1.50e-13 69.7
Msa0437330 AT2G37260.3 35.345 116 60 3 72 182 218 323 2.58e-13 69.3
Msa0437330 AT2G37260.2 35.345 116 60 3 72 182 216 321 2.79e-13 68.9
Msa0437330 AT1G69310.4 49.153 59 27 1 124 182 146 201 3.21e-13 68.6
Msa0437330 AT1G69310.2 49.153 59 27 1 124 182 146 201 3.21e-13 68.6
Msa0437330 AT1G69310.1 49.153 59 27 1 124 182 146 201 3.21e-13 68.6
Msa0437330 AT2G37260.1 35.345 116 60 3 72 182 298 403 3.24e-13 69.3
Msa0437330 AT2G23320.1 50.877 57 26 1 126 182 241 295 3.60e-13 68.6
Msa0437330 AT5G13080.1 51.562 64 26 2 124 187 66 124 4.84e-13 65.5
Msa0437330 AT3G58710.2 46.875 64 32 1 126 189 71 132 5.73e-13 67.4
Msa0437330 AT3G58710.1 46.875 64 32 1 126 189 72 133 5.85e-13 67.4
Msa0437330 AT4G24240.1 41.667 84 45 2 99 182 257 336 7.00e-13 68.2
Msa0437330 AT5G28650.1 52.632 57 25 1 126 182 263 317 7.34e-13 67.8
Msa0437330 AT5G41570.1 43.038 79 40 2 112 190 85 158 8.34e-13 65.5
Msa0437330 AT1G29860.1 40.476 84 45 2 110 193 121 199 9.19e-13 67.0
Msa0437330 AT4G23550.1 47.458 59 29 1 124 182 139 195 9.33e-13 67.4
Msa0437330 AT2G46130.1 48.438 64 28 2 124 187 29 87 1.12e-12 63.5
Msa0437330 AT1G64000.1 40.659 91 43 3 112 196 101 186 1.18e-12 65.5
Msa0437330 AT1G80590.1 39.241 79 45 1 112 187 69 147 1.91e-12 65.5
Msa0437330 AT4G18170.1 48.438 64 28 2 124 187 171 229 1.94e-12 66.6
Msa0437330 AT2G47260.1 37.778 90 53 1 98 187 147 233 2.19e-12 66.6
Msa0437330 AT3G62340.1 48.438 64 30 1 124 187 117 177 3.25e-12 65.5
Msa0437330 AT3G04670.1 50.877 57 26 1 126 182 263 317 3.43e-12 65.9
Msa0437330 AT4G26640.2 45.714 70 32 3 125 194 211 274 3.85e-12 66.2
Msa0437330 AT4G26640.2 44.776 67 34 1 124 190 380 443 7.52e-12 65.5
Msa0437330 AT4G26640.5 45.070 71 33 3 124 194 34 98 3.95e-12 65.9
Msa0437330 AT4G26640.5 44.776 67 34 1 124 190 204 267 8.12e-12 65.1
Msa0437330 AT4G26640.6 45.070 71 33 3 124 194 34 98 3.95e-12 65.9
Msa0437330 AT4G26640.6 44.776 67 34 1 124 190 204 267 8.12e-12 65.1
Msa0437330 AT4G26640.4 45.070 71 33 3 124 194 34 98 3.95e-12 65.9
Msa0437330 AT4G26640.4 44.776 67 34 1 124 190 204 267 8.12e-12 65.1
Msa0437330 AT4G26640.3 45.070 71 33 3 124 194 34 98 3.95e-12 65.9
Msa0437330 AT4G26640.3 44.776 67 34 1 124 190 204 267 8.12e-12 65.1
Msa0437330 AT4G26640.7 45.714 70 32 3 125 194 171 234 3.97e-12 66.2
Msa0437330 AT4G26640.7 44.776 67 34 1 124 190 340 403 7.40e-12 65.5
Msa0437330 AT2G25000.2 44.776 67 35 1 123 189 101 165 4.03e-12 64.7
Msa0437330 AT2G25000.4 44.776 67 35 1 123 189 101 165 4.03e-12 64.7
Msa0437330 AT4G26640.1 45.714 70 32 3 125 194 139 202 4.25e-12 66.2
Msa0437330 AT4G26640.1 44.776 67 34 1 124 190 308 371 8.08e-12 65.1
Msa0437330 AT2G25000.3 44.776 67 35 1 123 189 123 187 4.30e-12 64.7
Msa0437330 AT1G13960.1 46.875 64 30 2 125 188 229 288 4.72e-12 65.9
Msa0437330 AT1G13960.1 47.458 59 28 1 124 182 408 463 6.30e-12 65.5
Msa0437330 AT2G25000.1 44.776 67 35 1 123 189 144 208 4.75e-12 65.1
Msa0437330 AT3G01970.1 48.529 68 30 2 124 191 64 126 5.06e-12 62.8
Msa0437330 AT5G01900.1 43.750 64 36 0 126 189 111 174 5.41e-12 64.7
Msa0437330 AT5G46350.1 46.875 64 29 2 124 187 182 240 5.99e-12 65.1
Msa0437330 AT4G26440.1 48.571 70 30 3 125 194 178 241 6.07e-12 65.9
Msa0437330 AT4G26440.1 46.269 67 33 1 124 190 371 434 1.27e-11 64.7
Msa0437330 AT2G44745.1 45.070 71 36 1 112 182 132 199 6.69e-12 63.9
Msa0437330 AT3G01080.3 48.438 64 29 2 125 188 205 264 7.34e-12 64.7
Msa0437330 AT1G13960.2 46.875 64 30 2 125 188 76 135 7.85e-12 65.1
Msa0437330 AT1G13960.2 47.458 59 28 1 124 182 255 310 8.55e-12 64.7
Msa0437330 AT2G03340.1 45.455 66 32 2 125 190 250 311 7.86e-12 65.5
Msa0437330 AT2G03340.1 43.284 67 35 1 124 190 414 477 1.11e-11 64.7
Msa0437330 AT3G01080.2 48.438 64 29 2 125 188 205 264 8.61e-12 65.1
Msa0437330 AT3G01080.1 48.438 64 29 2 125 188 167 226 9.51e-12 65.1
Msa0437330 AT2G04880.2 44.304 79 36 4 119 197 105 175 9.65e-12 65.1
Msa0437330 AT2G04880.2 40.299 67 37 1 124 190 282 345 2.35e-11 63.9
Msa0437330 AT2G04880.1 44.304 79 36 4 119 197 105 175 9.93e-12 65.1
Msa0437330 AT2G04880.1 40.299 67 37 1 124 190 306 369 2.81e-11 63.5
Msa0437330 AT5G45050.1 42.500 80 40 3 108 187 1165 1238 2.08e-11 64.3
Msa0437330 AT5G45050.2 42.500 80 40 3 108 187 1137 1210 2.15e-11 64.3
Msa0437330 AT5G45050.4 42.500 80 40 3 108 187 1026 1099 2.24e-11 64.3
Msa0437330 AT2G40740.2 45.902 61 33 0 145 205 149 209 2.47e-11 62.8
Msa0437330 AT4G01720.1 37.963 108 60 4 81 187 196 297 2.49e-11 63.9
Msa0437330 AT5G07100.1 47.458 59 28 1 124 182 233 288 3.01e-11 62.8
Msa0437330 AT5G07100.1 42.857 70 35 2 125 194 117 181 6.42e-11 62.0
Msa0437330 AT5G07100.2 47.458 59 28 1 124 182 140 195 3.01e-11 62.0
Msa0437330 AT5G07100.2 42.857 70 35 2 125 194 24 88 4.82e-11 61.2
Msa0437330 AT5G07100.4 47.458 59 28 1 124 182 140 195 3.01e-11 62.0
Msa0437330 AT5G07100.4 42.857 70 35 2 125 194 24 88 4.82e-11 61.2
Msa0437330 AT5G07100.5 47.458 59 28 1 124 182 140 195 3.01e-11 62.0
Msa0437330 AT5G07100.5 42.857 70 35 2 125 194 24 88 4.82e-11 61.2
Msa0437330 AT5G07100.3 47.458 59 28 1 124 182 140 195 3.01e-11 62.0
Msa0437330 AT5G07100.3 42.857 70 35 2 125 194 24 88 4.82e-11 61.2
Msa0437330 AT2G21900.1 40.299 67 37 1 123 189 107 170 3.79e-11 61.2
Msa0437330 AT5G43290.1 40.541 111 50 5 120 224 109 209 5.67e-11 62.0
Msa0437330 AT4G39410.1 41.176 85 46 2 98 182 197 277 6.07e-11 62.0
Msa0437330 AT5G15130.1 38.462 78 46 1 110 187 212 287 6.40e-11 62.8
Msa0437330 AT5G15130.2 38.462 78 46 1 110 187 170 245 6.77e-11 62.4

Find 61 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTATGATGACCTCACTTT+TGG 0.188414 3_2:-91539688 None:intergenic
TCAACATAGTAAGTGCTTTC+TGG 0.207919 3_2:-91539590 None:intergenic
TCCCTCAAAGTTAAAGATAA+AGG 0.227041 3_2:+91540867 Msa0437330:CDS
CTCAAGCTAAGCCTTTAAAA+AGG 0.231958 3_2:+91540839 Msa0437330:CDS
CAAGAATTCATTGGTTTCAT+TGG 0.239108 3_2:-91539544 None:intergenic
TTCACTTGTTCCTTCCATTT+AGG 0.269402 3_2:-91540042 None:intergenic
CATTGGATGATATAATTATA+TGG 0.275590 3_2:-91539527 None:intergenic
AGGATTATCTGAAGGGTCTT+TGG 0.285031 3_2:+91540080 Msa0437330:CDS
CCGAGGGAAAATACCCTCTT+TGG 0.291656 3_2:-91541001 None:intergenic
CTTTCCTTGGATTAATTCAT+TGG 0.302740 3_2:-91539481 None:intergenic
CCCTCAAAGTTAAAGATAAA+GGG 0.333691 3_2:+91540868 Msa0437330:CDS
CCCTTTATCTTTAACTTTGA+GGG 0.337711 3_2:-91540868 None:intergenic
GCAGAAAGAGCATGCCTAAA+TGG 0.338464 3_2:+91540028 Msa0437330:intron
TATGGTCAAAAGGATATTCT+TGG 0.360560 3_2:+91540126 Msa0437330:CDS
TTGTAAAATGATAATGAAGA+TGG 0.362503 3_2:-91539418 None:intergenic
GAATATAGCTGGAGAAAATA+TGG 0.367378 3_2:+91540108 Msa0437330:CDS
GCCCTTTATCTTTAACTTTG+AGG 0.367772 3_2:-91540869 None:intergenic
TTTGAACCTGCTTTGTTGCT+AGG 0.370195 3_2:-91540753 None:intergenic
TAAGTTACCTCAATTATTGT+TGG 0.376442 3_2:-91540790 None:intergenic
TTTGTCAATCAAGAATTCAT+TGG 0.407531 3_2:-91539553 None:intergenic
GCTTTGCTAACTCCTTTCCT+TGG 0.408135 3_2:-91539494 None:intergenic
GGACTCTCGTTTGTAAAAGA+AGG 0.431784 3_2:-91539666 None:intergenic
TACAGATGCACACATAGAAA+TGG 0.436912 3_2:+91540721 Msa0437330:CDS
AATGAAGATGGGCACTTAAG+TGG 0.450326 3_2:-91539406 None:intergenic
TTTAACATCAAGTTCTGCCT+TGG 0.466903 3_2:-91540959 None:intergenic
CTGGAGAAAATATGGTCAAA+AGG 0.471109 3_2:+91540116 Msa0437330:CDS
GGAGAGACTAAGACCATTGA+TGG 0.480847 3_2:+91539624 Msa0437330:CDS
GACCATTGATGGTAAAATGA+AGG 0.490394 3_2:+91539635 Msa0437330:CDS
TGTAAAATGATAATGAAGAT+GGG 0.499849 3_2:-91539417 None:intergenic
TCTGATTCAATTGATGGAGA+AGG 0.500124 3_2:-91541032 None:intergenic
ACAATGCTCTCTTCAAGAAA+AGG 0.501466 3_2:+91539724 Msa0437330:CDS
CTTTGGATGATGAATATAGC+TGG 0.515960 3_2:+91540097 Msa0437330:CDS
GAGCATTGTGGTTAAACTCC+TGG 0.533299 3_2:-91539710 None:intergenic
TGAAGATCCAACAATAATTG+AGG 0.540253 3_2:+91540783 Msa0437330:CDS
AGAGACTAGTTTCACTTCCA+AGG 0.541625 3_2:+91540942 Msa0437330:CDS
CAGAGGAGTTGCTTAGTGAA+AGG 0.561520 3_2:-91539354 None:intergenic
GCACTTAAGTGGAGTAATGA+AGG 0.561732 3_2:-91539395 None:intergenic
TAGCAACAAAGCAGGTTCAA+AGG 0.565187 3_2:+91540755 Msa0437330:CDS
CATAGTAAGTGCTTTCTGGT+AGG 0.575281 3_2:-91539586 None:intergenic
CAATGAATTAATCCAAGGAA+AGG 0.585373 3_2:+91539482 Msa0437330:CDS
CTTACTATGTTGAATGTGAG+AGG 0.591736 3_2:+91539600 Msa0437330:CDS
GAGTGTGAAATAATAGACAG+AGG 0.601050 3_2:-91539371 None:intergenic
AAAGAGCATGCCTAAATGGA+AGG 0.601574 3_2:+91540032 Msa0437330:CDS
GTGAAGATTTGCACAAACAC+AGG 0.602509 3_2:+91540060 Msa0437330:CDS
ATAACCAATGAATTAATCCA+AGG 0.604601 3_2:+91539477 Msa0437330:CDS
AGGGTGCCTAGCAACAAAGC+AGG 0.623925 3_2:+91540747 Msa0437330:CDS
ACAAACACAGGATTATCTGA+AGG 0.625241 3_2:+91540072 Msa0437330:CDS
TAGTGAAAGGTGAGACGAAG+GGG 0.627360 3_2:-91539341 None:intergenic
AAGTGAGGTCATCATAGACC+AGG 0.627405 3_2:+91539692 Msa0437330:CDS
CTTAGTGAAAGGTGAGACGA+AGG 0.627674 3_2:-91539343 None:intergenic
GGAGAAGGAAACAAAACCGA+GGG 0.638142 3_2:-91541017 None:intergenic
CAAACACAGGATTATCTGAA+GGG 0.645284 3_2:+91540073 Msa0437330:CDS
AAACGAGAGTCCCAAAAGTG+AGG 0.654222 3_2:+91539677 Msa0437330:CDS
ATAATTGAGGTAACTTACAG+AGG 0.655185 3_2:+91540796 Msa0437330:CDS
GACTTAGAAGAAACCAAAGA+GGG 0.656480 3_2:+91540988 Msa0437330:CDS
TTAGTGAAAGGTGAGACGAA+GGG 0.668436 3_2:-91539342 None:intergenic
ACTATGTTGAATGTGAGAGG+AGG 0.670945 3_2:+91539603 Msa0437330:CDS
TGACTTAGAAGAAACCAAAG+AGG 0.672282 3_2:+91540987 Msa0437330:CDS
TGGAGAAGGAAACAAAACCG+AGG 0.694065 3_2:-91541018 None:intergenic
TGCACACATAGAAATGGACA+AGG 0.697085 3_2:+91540727 Msa0437330:CDS
GCACACATAGAAATGGACAA+GGG 0.758330 3_2:+91540728 Msa0437330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATAATATTTGTTTTAG+TGG + chr3_2:91540226-91540245 Msa0437330:intron 10.0%
!!! ACTTTTTTGTTAAATATTTA+AGG + chr3_2:91540401-91540420 Msa0437330:intron 10.0%
!!! ATTAATAATATTTGTTTTAG+TGG + chr3_2:91540226-91540245 Msa0437330:intron 10.0%
!!! ACTTTTTTGTTAAATATTTA+AGG + chr3_2:91540401-91540420 Msa0437330:intron 10.0%
!!! CATTATCATTTTACAAAAAA+TGG + chr3_2:91539425-91539444 Msa0437330:exon 15.0%
!! CTATGTTAATAAAAAAGTTA+AGG - chr3_2:91539823-91539842 None:intergenic 15.0%
!! AAATGATACTTGTAATAAAA+CGG + chr3_2:91539897-91539916 Msa0437330:intron 15.0%
!!! AAATGTTTTCACAATTTTAT+TGG + chr3_2:91540679-91540698 Msa0437330:intron 15.0%
!!! CATTATCATTTTACAAAAAA+TGG + chr3_2:91539425-91539444 Msa0437330:exon 15.0%
!! CTATGTTAATAAAAAAGTTA+AGG - chr3_2:91539823-91539842 None:intergenic 15.0%
!! AAATGATACTTGTAATAAAA+CGG + chr3_2:91539897-91539916 Msa0437330:intron 15.0%
!!! AAATGTTTTCACAATTTTAT+TGG + chr3_2:91540679-91540698 Msa0437330:intron 15.0%
!!! TGTAAAATGATAATGAAGAT+GGG - chr3_2:91539420-91539439 None:intergenic 20.0%
!!! TTGTAAAATGATAATGAAGA+TGG - chr3_2:91539421-91539440 None:intergenic 20.0%
!! CATTGGATGATATAATTATA+TGG - chr3_2:91539530-91539549 None:intergenic 20.0%
!! TATGTAATCATTTGAATTTG+TGG + chr3_2:91540004-91540023 Msa0437330:intron 20.0%
!!! ATATTGCTCAACTATTTTTT+TGG + chr3_2:91540362-91540381 Msa0437330:intron 20.0%
!!! TGCACTATTTGTTAATAATA+AGG + chr3_2:91540471-91540490 Msa0437330:intron 20.0%
!!! TTCAACATTTGTATTGTTTT+CGG + chr3_2:91540570-91540589 Msa0437330:intron 20.0%
!!! TTTTCACAATTTTATTGGTT+TGG + chr3_2:91540684-91540703 Msa0437330:intron 20.0%
!!! TGTAAAATGATAATGAAGAT+GGG - chr3_2:91539420-91539439 None:intergenic 20.0%
!!! TTGTAAAATGATAATGAAGA+TGG - chr3_2:91539421-91539440 None:intergenic 20.0%
!! CATTGGATGATATAATTATA+TGG - chr3_2:91539530-91539549 None:intergenic 20.0%
!! TATGTAATCATTTGAATTTG+TGG + chr3_2:91540004-91540023 Msa0437330:intron 20.0%
!!! ATATTGCTCAACTATTTTTT+TGG + chr3_2:91540362-91540381 Msa0437330:intron 20.0%
!!! TGCACTATTTGTTAATAATA+AGG + chr3_2:91540471-91540490 Msa0437330:intron 20.0%
!!! TTCAACATTTGTATTGTTTT+CGG + chr3_2:91540570-91540589 Msa0437330:intron 20.0%
!!! TTTTCACAATTTTATTGGTT+TGG + chr3_2:91540684-91540703 Msa0437330:intron 20.0%
! ATAACCAATGAATTAATCCA+AGG + chr3_2:91539477-91539496 Msa0437330:CDS 25.0%
! TTTGTCAATCAAGAATTCAT+TGG - chr3_2:91539556-91539575 None:intergenic 25.0%
!!! AAGCGTTTTGAATTTGATAT+AGG + chr3_2:91540264-91540283 Msa0437330:intron 25.0%
!!! CAATATTGATTTGGTTAACA+GGG - chr3_2:91540348-91540367 None:intergenic 25.0%
!! ATAGTTGAGCAATATTGATT+TGG - chr3_2:91540357-91540376 None:intergenic 25.0%
! ATCTTGAGTAATGAAATAGA+AGG - chr3_2:91540450-91540469 None:intergenic 25.0%
! TAAGTTACCTCAATTATTGT+TGG - chr3_2:91540793-91540812 None:intergenic 25.0%
!! TCATTTTCTGATTCAATTGA+TGG - chr3_2:91541041-91541060 None:intergenic 25.0%
! ATAACCAATGAATTAATCCA+AGG + chr3_2:91539477-91539496 Msa0437330:CDS 25.0%
! TTTGTCAATCAAGAATTCAT+TGG - chr3_2:91539556-91539575 None:intergenic 25.0%
!!! AAGCGTTTTGAATTTGATAT+AGG + chr3_2:91540264-91540283 Msa0437330:intron 25.0%
!!! CAATATTGATTTGGTTAACA+GGG - chr3_2:91540348-91540367 None:intergenic 25.0%
!! ATAGTTGAGCAATATTGATT+TGG - chr3_2:91540357-91540376 None:intergenic 25.0%
! ATCTTGAGTAATGAAATAGA+AGG - chr3_2:91540450-91540469 None:intergenic 25.0%
! TAAGTTACCTCAATTATTGT+TGG - chr3_2:91540793-91540812 None:intergenic 25.0%
!! TCATTTTCTGATTCAATTGA+TGG - chr3_2:91541041-91541060 None:intergenic 25.0%
CTTTCCTTGGATTAATTCAT+TGG - chr3_2:91539484-91539503 None:intergenic 30.0%
CAATGAATTAATCCAAGGAA+AGG + chr3_2:91539482-91539501 Msa0437330:CDS 30.0%
!! CAAGAATTCATTGGTTTCAT+TGG - chr3_2:91539547-91539566 None:intergenic 30.0%
! ATCCTTCATTTTACCATCAA+TGG - chr3_2:91539640-91539659 None:intergenic 30.0%
GAATATAGCTGGAGAAAATA+TGG + chr3_2:91540108-91540127 Msa0437330:CDS 30.0%
TATGGTCAAAAGGATATTCT+TGG + chr3_2:91540126-91540145 Msa0437330:CDS 30.0%
!! GCAATATTGATTTGGTTAAC+AGG - chr3_2:91540349-91540368 None:intergenic 30.0%
! AGAAGACAAAGTGCTTATTA+AGG + chr3_2:91540520-91540539 Msa0437330:intron 30.0%
TGAAGATCCAACAATAATTG+AGG + chr3_2:91540783-91540802 Msa0437330:CDS 30.0%
ATAATTGAGGTAACTTACAG+AGG + chr3_2:91540796-91540815 Msa0437330:CDS 30.0%
! TCAAGCTAAGCCTTTAAAAA+GGG + chr3_2:91540840-91540859 Msa0437330:CDS 30.0%
TCCCTCAAAGTTAAAGATAA+AGG + chr3_2:91540867-91540886 Msa0437330:CDS 30.0%
! CCCTTTATCTTTAACTTTGA+GGG - chr3_2:91540871-91540890 None:intergenic 30.0%
CCCTCAAAGTTAAAGATAAA+GGG + chr3_2:91540868-91540887 Msa0437330:CDS 30.0%
CTTTCCTTGGATTAATTCAT+TGG - chr3_2:91539484-91539503 None:intergenic 30.0%
CAATGAATTAATCCAAGGAA+AGG + chr3_2:91539482-91539501 Msa0437330:CDS 30.0%
!! CAAGAATTCATTGGTTTCAT+TGG - chr3_2:91539547-91539566 None:intergenic 30.0%
! ATCCTTCATTTTACCATCAA+TGG - chr3_2:91539640-91539659 None:intergenic 30.0%
GAATATAGCTGGAGAAAATA+TGG + chr3_2:91540108-91540127 Msa0437330:CDS 30.0%
TATGGTCAAAAGGATATTCT+TGG + chr3_2:91540126-91540145 Msa0437330:CDS 30.0%
!! GCAATATTGATTTGGTTAAC+AGG - chr3_2:91540349-91540368 None:intergenic 30.0%
! AGAAGACAAAGTGCTTATTA+AGG + chr3_2:91540520-91540539 Msa0437330:intron 30.0%
TGAAGATCCAACAATAATTG+AGG + chr3_2:91540783-91540802 Msa0437330:CDS 30.0%
ATAATTGAGGTAACTTACAG+AGG + chr3_2:91540796-91540815 Msa0437330:CDS 30.0%
! TCAAGCTAAGCCTTTAAAAA+GGG + chr3_2:91540840-91540859 Msa0437330:CDS 30.0%
TCCCTCAAAGTTAAAGATAA+AGG + chr3_2:91540867-91540886 Msa0437330:CDS 30.0%
! CCCTTTATCTTTAACTTTGA+GGG - chr3_2:91540871-91540890 None:intergenic 30.0%
CCCTCAAAGTTAAAGATAAA+GGG + chr3_2:91540868-91540887 Msa0437330:CDS 30.0%
GAGTGTGAAATAATAGACAG+AGG - chr3_2:91539374-91539393 None:intergenic 35.0%
TCAACATAGTAAGTGCTTTC+TGG - chr3_2:91539593-91539612 None:intergenic 35.0%
CTTACTATGTTGAATGTGAG+AGG + chr3_2:91539600-91539619 Msa0437330:CDS 35.0%
! GACCATTGATGGTAAAATGA+AGG + chr3_2:91539635-91539654 Msa0437330:CDS 35.0%
!! TCTATGATGACCTCACTTTT+GGG - chr3_2:91539690-91539709 None:intergenic 35.0%
!!! TTTTCTTGAAGAGAGCATTG+TGG - chr3_2:91539725-91539744 None:intergenic 35.0%
ACAATGCTCTCTTCAAGAAA+AGG + chr3_2:91539724-91539743 Msa0437330:CDS 35.0%
TTCATGTGTGTGAATTGTCA+AGG + chr3_2:91539953-91539972 Msa0437330:intron 35.0%
ACTGAAATACGTTCAAGCTA+GGG - chr3_2:91539985-91540004 None:intergenic 35.0%
TACTGAAATACGTTCAAGCT+AGG - chr3_2:91539986-91540005 None:intergenic 35.0%
TTCACTTGTTCCTTCCATTT+AGG - chr3_2:91540045-91540064 None:intergenic 35.0%
ACAAACACAGGATTATCTGA+AGG + chr3_2:91540072-91540091 Msa0437330:CDS 35.0%
CAAACACAGGATTATCTGAA+GGG + chr3_2:91540073-91540092 Msa0437330:CDS 35.0%
CTTTGGATGATGAATATAGC+TGG + chr3_2:91540097-91540116 Msa0437330:CDS 35.0%
CTGGAGAAAATATGGTCAAA+AGG + chr3_2:91540116-91540135 Msa0437330:CDS 35.0%
! TTCTTGGAGCTAAGTTTTCA+AGG + chr3_2:91540142-91540161 Msa0437330:CDS 35.0%
!! TTTATTGGTTTGGATTGCAG+AGG + chr3_2:91540694-91540713 Msa0437330:intron 35.0%
TACAGATGCACACATAGAAA+TGG + chr3_2:91540721-91540740 Msa0437330:CDS 35.0%
!! CTTTTTAAAGGCTTAGCTTG+AGG - chr3_2:91540841-91540860 None:intergenic 35.0%
! CTCAAGCTAAGCCTTTAAAA+AGG + chr3_2:91540839-91540858 Msa0437330:CDS 35.0%
! GAGGGAAATTCCCTTTTTAA+AGG - chr3_2:91540853-91540872 None:intergenic 35.0%
! GCCCTTTATCTTTAACTTTG+AGG - chr3_2:91540872-91540891 None:intergenic 35.0%
TTTAACATCAAGTTCTGCCT+TGG - chr3_2:91540962-91540981 None:intergenic 35.0%
TGACTTAGAAGAAACCAAAG+AGG + chr3_2:91540987-91541006 Msa0437330:CDS 35.0%
GACTTAGAAGAAACCAAAGA+GGG + chr3_2:91540988-91541007 Msa0437330:CDS 35.0%
TCTGATTCAATTGATGGAGA+AGG - chr3_2:91541035-91541054 None:intergenic 35.0%
GAGTGTGAAATAATAGACAG+AGG - chr3_2:91539374-91539393 None:intergenic 35.0%
TCAACATAGTAAGTGCTTTC+TGG - chr3_2:91539593-91539612 None:intergenic 35.0%
CTTACTATGTTGAATGTGAG+AGG + chr3_2:91539600-91539619 Msa0437330:CDS 35.0%
! GACCATTGATGGTAAAATGA+AGG + chr3_2:91539635-91539654 Msa0437330:CDS 35.0%
!! TCTATGATGACCTCACTTTT+GGG - chr3_2:91539690-91539709 None:intergenic 35.0%
!!! TTTTCTTGAAGAGAGCATTG+TGG - chr3_2:91539725-91539744 None:intergenic 35.0%
ACAATGCTCTCTTCAAGAAA+AGG + chr3_2:91539724-91539743 Msa0437330:CDS 35.0%
TTCATGTGTGTGAATTGTCA+AGG + chr3_2:91539953-91539972 Msa0437330:intron 35.0%
ACTGAAATACGTTCAAGCTA+GGG - chr3_2:91539985-91540004 None:intergenic 35.0%
TACTGAAATACGTTCAAGCT+AGG - chr3_2:91539986-91540005 None:intergenic 35.0%
TTCACTTGTTCCTTCCATTT+AGG - chr3_2:91540045-91540064 None:intergenic 35.0%
ACAAACACAGGATTATCTGA+AGG + chr3_2:91540072-91540091 Msa0437330:CDS 35.0%
CAAACACAGGATTATCTGAA+GGG + chr3_2:91540073-91540092 Msa0437330:CDS 35.0%
CTTTGGATGATGAATATAGC+TGG + chr3_2:91540097-91540116 Msa0437330:CDS 35.0%
CTGGAGAAAATATGGTCAAA+AGG + chr3_2:91540116-91540135 Msa0437330:CDS 35.0%
! TTCTTGGAGCTAAGTTTTCA+AGG + chr3_2:91540142-91540161 Msa0437330:CDS 35.0%
!! TTTATTGGTTTGGATTGCAG+AGG + chr3_2:91540694-91540713 Msa0437330:intron 35.0%
TACAGATGCACACATAGAAA+TGG + chr3_2:91540721-91540740 Msa0437330:CDS 35.0%
!! CTTTTTAAAGGCTTAGCTTG+AGG - chr3_2:91540841-91540860 None:intergenic 35.0%
! CTCAAGCTAAGCCTTTAAAA+AGG + chr3_2:91540839-91540858 Msa0437330:CDS 35.0%
! GAGGGAAATTCCCTTTTTAA+AGG - chr3_2:91540853-91540872 None:intergenic 35.0%
! GCCCTTTATCTTTAACTTTG+AGG - chr3_2:91540872-91540891 None:intergenic 35.0%
TTTAACATCAAGTTCTGCCT+TGG - chr3_2:91540962-91540981 None:intergenic 35.0%
TGACTTAGAAGAAACCAAAG+AGG + chr3_2:91540987-91541006 Msa0437330:CDS 35.0%
GACTTAGAAGAAACCAAAGA+GGG + chr3_2:91540988-91541007 Msa0437330:CDS 35.0%
TCTGATTCAATTGATGGAGA+AGG - chr3_2:91541035-91541054 None:intergenic 35.0%
TTAGTGAAAGGTGAGACGAA+GGG - chr3_2:91539345-91539364 None:intergenic 40.0%
GCACTTAAGTGGAGTAATGA+AGG - chr3_2:91539398-91539417 None:intergenic 40.0%
AATGAAGATGGGCACTTAAG+TGG - chr3_2:91539409-91539428 None:intergenic 40.0%
! CATAGTAAGTGCTTTCTGGT+AGG - chr3_2:91539589-91539608 None:intergenic 40.0%
ACTATGTTGAATGTGAGAGG+AGG + chr3_2:91539603-91539622 Msa0437330:CDS 40.0%
GGACTCTCGTTTGTAAAAGA+AGG - chr3_2:91539669-91539688 None:intergenic 40.0%
! GTCTATGATGACCTCACTTT+TGG - chr3_2:91539691-91539710 None:intergenic 40.0%
TGTGTGAATTGTCAAGGTCA+AGG + chr3_2:91539959-91539978 Msa0437330:intron 40.0%
! AAAGAGCATGCCTAAATGGA+AGG + chr3_2:91540032-91540051 Msa0437330:CDS 40.0%
GTGAAGATTTGCACAAACAC+AGG + chr3_2:91540060-91540079 Msa0437330:CDS 40.0%
AGGATTATCTGAAGGGTCTT+TGG + chr3_2:91540080-91540099 Msa0437330:CDS 40.0%
TGTAAGCATCTTAGTGTCAC+AGG + chr3_2:91540294-91540313 Msa0437330:intron 40.0%
GGTTAACAGGGCTAAAAACA+GGG - chr3_2:91540336-91540355 None:intergenic 40.0%
TGGTTAACAGGGCTAAAAAC+AGG - chr3_2:91540337-91540356 None:intergenic 40.0%
TGCACACATAGAAATGGACA+AGG + chr3_2:91540727-91540746 Msa0437330:CDS 40.0%
GCACACATAGAAATGGACAA+GGG + chr3_2:91540728-91540747 Msa0437330:CDS 40.0%
! TTTGAACCTGCTTTGTTGCT+AGG - chr3_2:91540756-91540775 None:intergenic 40.0%
TAGCAACAAAGCAGGTTCAA+AGG + chr3_2:91540755-91540774 Msa0437330:CDS 40.0%
!! AGAGACTAGTTTCACTTCCA+AGG + chr3_2:91540942-91540961 Msa0437330:CDS 40.0%
TTAGTGAAAGGTGAGACGAA+GGG - chr3_2:91539345-91539364 None:intergenic 40.0%
GCACTTAAGTGGAGTAATGA+AGG - chr3_2:91539398-91539417 None:intergenic 40.0%
AATGAAGATGGGCACTTAAG+TGG - chr3_2:91539409-91539428 None:intergenic 40.0%
! CATAGTAAGTGCTTTCTGGT+AGG - chr3_2:91539589-91539608 None:intergenic 40.0%
ACTATGTTGAATGTGAGAGG+AGG + chr3_2:91539603-91539622 Msa0437330:CDS 40.0%
GGACTCTCGTTTGTAAAAGA+AGG - chr3_2:91539669-91539688 None:intergenic 40.0%
! GTCTATGATGACCTCACTTT+TGG - chr3_2:91539691-91539710 None:intergenic 40.0%
TGTGTGAATTGTCAAGGTCA+AGG + chr3_2:91539959-91539978 Msa0437330:intron 40.0%
! AAAGAGCATGCCTAAATGGA+AGG + chr3_2:91540032-91540051 Msa0437330:CDS 40.0%
GTGAAGATTTGCACAAACAC+AGG + chr3_2:91540060-91540079 Msa0437330:CDS 40.0%
AGGATTATCTGAAGGGTCTT+TGG + chr3_2:91540080-91540099 Msa0437330:CDS 40.0%
TGTAAGCATCTTAGTGTCAC+AGG + chr3_2:91540294-91540313 Msa0437330:intron 40.0%
GGTTAACAGGGCTAAAAACA+GGG - chr3_2:91540336-91540355 None:intergenic 40.0%
TGGTTAACAGGGCTAAAAAC+AGG - chr3_2:91540337-91540356 None:intergenic 40.0%
TGCACACATAGAAATGGACA+AGG + chr3_2:91540727-91540746 Msa0437330:CDS 40.0%
GCACACATAGAAATGGACAA+GGG + chr3_2:91540728-91540747 Msa0437330:CDS 40.0%
! TTTGAACCTGCTTTGTTGCT+AGG - chr3_2:91540756-91540775 None:intergenic 40.0%
TAGCAACAAAGCAGGTTCAA+AGG + chr3_2:91540755-91540774 Msa0437330:CDS 40.0%
!! AGAGACTAGTTTCACTTCCA+AGG + chr3_2:91540942-91540961 Msa0437330:CDS 40.0%
TAGTGAAAGGTGAGACGAAG+GGG - chr3_2:91539344-91539363 None:intergenic 45.0%
CTTAGTGAAAGGTGAGACGA+AGG - chr3_2:91539346-91539365 None:intergenic 45.0%
CAGAGGAGTTGCTTAGTGAA+AGG - chr3_2:91539357-91539376 None:intergenic 45.0%
GCTTTGCTAACTCCTTTCCT+TGG - chr3_2:91539497-91539516 None:intergenic 45.0%
GGAGAGACTAAGACCATTGA+TGG + chr3_2:91539624-91539643 Msa0437330:CDS 45.0%
AAACGAGAGTCCCAAAAGTG+AGG + chr3_2:91539677-91539696 Msa0437330:CDS 45.0%
AAGTGAGGTCATCATAGACC+AGG + chr3_2:91539692-91539711 Msa0437330:CDS 45.0%
! GAGCATTGTGGTTAAACTCC+TGG - chr3_2:91539713-91539732 None:intergenic 45.0%
! GCAGAAAGAGCATGCCTAAA+TGG + chr3_2:91540028-91540047 Msa0437330:intron 45.0%
!!! CCAAAGAGGGTATTTTCCCT+CGG + chr3_2:91541001-91541020 Msa0437330:CDS 45.0%
GGAGAAGGAAACAAAACCGA+GGG - chr3_2:91541020-91541039 None:intergenic 45.0%
TGGAGAAGGAAACAAAACCG+AGG - chr3_2:91541021-91541040 None:intergenic 45.0%
TAGTGAAAGGTGAGACGAAG+GGG - chr3_2:91539344-91539363 None:intergenic 45.0%
CTTAGTGAAAGGTGAGACGA+AGG - chr3_2:91539346-91539365 None:intergenic 45.0%
CAGAGGAGTTGCTTAGTGAA+AGG - chr3_2:91539357-91539376 None:intergenic 45.0%
GCTTTGCTAACTCCTTTCCT+TGG - chr3_2:91539497-91539516 None:intergenic 45.0%
GGAGAGACTAAGACCATTGA+TGG + chr3_2:91539624-91539643 Msa0437330:CDS 45.0%
AAACGAGAGTCCCAAAAGTG+AGG + chr3_2:91539677-91539696 Msa0437330:CDS 45.0%
AAGTGAGGTCATCATAGACC+AGG + chr3_2:91539692-91539711 Msa0437330:CDS 45.0%
! GAGCATTGTGGTTAAACTCC+TGG - chr3_2:91539713-91539732 None:intergenic 45.0%
! GCAGAAAGAGCATGCCTAAA+TGG + chr3_2:91540028-91540047 Msa0437330:intron 45.0%
!!! CCAAAGAGGGTATTTTCCCT+CGG + chr3_2:91541001-91541020 Msa0437330:CDS 45.0%
GGAGAAGGAAACAAAACCGA+GGG - chr3_2:91541020-91541039 None:intergenic 45.0%
TGGAGAAGGAAACAAAACCG+AGG - chr3_2:91541021-91541040 None:intergenic 45.0%
CCGAGGGAAAATACCCTCTT+TGG - chr3_2:91541004-91541023 None:intergenic 50.0%
CCGAGGGAAAATACCCTCTT+TGG - chr3_2:91541004-91541023 None:intergenic 50.0%
! AGGGTGCCTAGCAACAAAGC+AGG + chr3_2:91540747-91540766 Msa0437330:CDS 55.0%
! AGGGTGCCTAGCAACAAAGC+AGG + chr3_2:91540747-91540766 Msa0437330:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 91539340 91541065 91539340 ID=Msa0437330;Name=Msa0437330
chr3_2 mRNA 91539340 91541065 91539340 ID=Msa0437330-mRNA-1;Parent=Msa0437330;Name=Msa0437330-mRNA-1;_AED=0.23;_eAED=0.23;_QI=104|1|0.66|1|1|1|3|0|261
chr3_2 exon 91539340 91539745 91539340 ID=Msa0437330-mRNA-1:exon:27375;Parent=Msa0437330-mRNA-1
chr3_2 exon 91540032 91540163 91540032 ID=Msa0437330-mRNA-1:exon:27376;Parent=Msa0437330-mRNA-1
chr3_2 exon 91540714 91541065 91540714 ID=Msa0437330-mRNA-1:exon:27377;Parent=Msa0437330-mRNA-1
chr3_2 five_prime_UTR 91539340 91539443 91539340 ID=Msa0437330-mRNA-1:five_prime_utr;Parent=Msa0437330-mRNA-1
chr3_2 CDS 91539444 91539745 91539444 ID=Msa0437330-mRNA-1:cds;Parent=Msa0437330-mRNA-1
chr3_2 CDS 91540032 91540163 91540032 ID=Msa0437330-mRNA-1:cds;Parent=Msa0437330-mRNA-1
chr3_2 CDS 91540714 91541065 91540714 ID=Msa0437330-mRNA-1:cds;Parent=Msa0437330-mRNA-1
Gene Sequence

>Msa0437330

ATGGAAGAGACTACAAAGAGAAAACGTGTTAGTATAACCAATGAATTAATCCAAGGAAAGGAGTTAGCAAAGCAGCTAAGTAACCATATAATTATATCATCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCAACCTACCAGAAAGCACTTACTATGTTGAATGTGAGAGGAGGAGAGACTAAGACCATTGATGGTAAAATGAAGGATTCTCATCCTTCTTTTACAAACGAGAGTCCCAAAAGTGAGGTCATCATAGACCAGGAGTTTAACCACAATGCTCTCTTCAAGAAAAGAAAGAGCATGCCTAAATGGAAGGAACAAGTGAAGATTTGCACAAACACAGGATTATCTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTACAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAGGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTAACTTACAGAGGAAGACACACATGCACTCATCCTCAAGCTAAGCCTTTAAAAAGGGAATTTCCCTCAAAGTTAAAGATAAAGGGCTTAGAGAAAAATAAACTTCACAATGATAAAAAGAATCAACTACAAACTCAAGAGACTAGTTTCACTTCCAAGGCAGAACTTGATGTTAAAAGAAATGACTTAGAAGAAACCAAAGAGGGTATTTTCCCTCGGTTTTGTTTCCTTCTCCATCAATTGAATCAGAAAATGAGATAA
Protein sequence

>Msa0437330

MEETTKRKRVSITNELIQGKELAKQLSNHIIISSNETNEFLIDKIISTYQKALTMLNVRGGETKTIDGKMKDSHPSFTNESPKSEVIIDQEFNHNALFKKRKSMPKWKEQVKICTNTGLSEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHPQAKPLKREFPSKLKIKGLEKNKLHNDKKNQLQTQETSFTSKAELDVKRNDLEETKEGIFPRFCFLLHQLNQKMR*