AlfalfaGEDB | Msa1427810

M. sativa cultivar zhongmu-4 / Msa1427810

KEGG: -
GO: GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0090696 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1990837 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427810	XP_003626559.1	81.544	298	15	4	1	265	1	291	2.31e-162	466

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427810	sp\|Q8H0Y8\|WRK41_ARATH	49.763	211	77	8	8	195	7	211	6.28e-48	166

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427810	G7L427	81.544	298	15	4	1	265	1	291	1.11e-162	466

TFs/TRs:

Gene ID	Type	Classification
Msa1427810	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0011760	Msa1427810	0.831494	1.616877e-55	-8.615850e-47
Msa0014790	Msa1427810	0.833692	4.607898e-56	-8.615850e-47
Msa0021980	Msa1427810	0.808725	2.689158e-50	-8.615850e-47
Msa0041000	Msa1427810	0.833169	6.223549e-56	-8.615850e-47
Msa0049330	Msa1427810	0.839941	1.172263e-57	-8.615850e-47
Msa0093440	Msa1427810	0.815905	7.274049e-52	-8.615850e-47
Msa0104360	Msa1427810	0.825671	4.127699e-54	-8.615850e-47
Msa1424510	Msa1427810	0.848053	7.831289e-60	-8.615850e-47
Msa1427810	Msa1441200	0.970764	4.086126e-132	-8.615850e-47
Msa1427810	Msa1445250	0.830468	2.887391e-55	-8.615850e-47
Msa1427810	Msa1454090	0.847592	1.049187e-59	-8.615850e-47
Msa1427810	Msa1459170	0.839983	1.143174e-57	-8.615850e-47
Msa1427810	Msa1460310	-0.805615	1.225689e-49	-8.615850e-47
Msa1427810	Msa1463560	-0.861010	1.385181e-63	-8.615850e-47
Msa0629890	Msa1427810	0.808546	2.937207e-50	-8.615850e-47
Msa0629960	Msa1427810	0.822090	2.852512e-53	-8.615850e-47
Msa0630060	Msa1427810	0.812310	4.521706e-51	-8.615850e-47
Msa0641020	Msa1427810	0.834162	3.514308e-56	-8.615850e-47
Msa0641030	Msa1427810	0.810168	1.318264e-50	-8.615850e-47
Msa0654020	Msa1427810	0.817183	3.762542e-52	-8.615850e-47
Msa0660870	Msa1427810	0.804537	2.059498e-49	-8.615850e-47
Msa0672850	Msa1427810	0.835088	2.056205e-56	-8.615850e-47
Msa0679560	Msa1427810	0.818652	1.752520e-52	-8.615850e-47
Msa0716750	Msa1427810	0.808027	3.788766e-50	-8.615850e-47
Msa0729920	Msa1427810	0.802288	6.024896e-49	-8.615850e-47
Msa0733400	Msa1427810	0.813672	2.273246e-51	-8.615850e-47
Msa0752580	Msa1427810	0.821638	3.630520e-53	-8.615850e-47
Msa0754500	Msa1427810	0.814704	1.345587e-51	-8.615850e-47
Msa0757980	Msa1427810	0.809035	2.308701e-50	-8.615850e-47
Msa0799280	Msa1427810	0.803776	2.966631e-49	-8.615850e-47
Msa0811940	Msa1427810	0.800482	1.411447e-48	-8.615850e-47
Msa0828900	Msa1427810	0.802042	6.768208e-49	-8.615850e-47
Msa0837500	Msa1427810	0.805411	1.352671e-49	-8.615850e-47
Msa0131090	Msa1427810	0.807991	3.856029e-50	-8.615850e-47
Msa0135590	Msa1427810	0.828004	1.144075e-54	-8.615850e-47
Msa0151870	Msa1427810	0.808367	3.207253e-50	-8.615850e-47
Msa0153440	Msa1427810	0.830549	2.758212e-55	-8.615850e-47
Msa0179860	Msa1427810	0.802525	5.382255e-49	-8.615850e-47
Msa0180290	Msa1427810	0.823987	1.030214e-53	-8.615850e-47
Msa0211670	Msa1427810	0.802297	5.998294e-49	-8.615850e-47
Msa0232860	Msa1427810	0.807197	5.684277e-50	-8.615850e-47
Msa1237260	Msa1427810	0.814594	1.422950e-51	-8.615850e-47
Msa1279330	Msa1427810	0.811950	5.417611e-51	-8.615850e-47
Msa1279850	Msa1427810	0.838567	2.663178e-57	-8.615850e-47
Msa1279860	Msa1427810	0.812506	4.096293e-51	-8.615850e-47
Msa1279870	Msa1427810	0.824398	8.248445e-54	-8.615850e-47
Msa1285820	Msa1427810	0.809810	1.573940e-50	-8.615850e-47
Msa1296650	Msa1427810	0.801799	7.591584e-49	-8.615850e-47
Msa1311150	Msa1427810	0.806164	9.393563e-50	-8.615850e-47
Msa1328600	Msa1427810	0.815369	9.578899e-52	-8.615850e-47
Msa1340530	Msa1427810	0.814365	1.598720e-51	-8.615850e-47
Msa1340880	Msa1427810	0.807612	4.642907e-50	-8.615850e-47
Msa0379340	Msa1427810	-0.844197	8.777319e-59	-8.615850e-47
Msa0389050	Msa1427810	0.829926	3.915822e-55	-8.615850e-47
Msa0428850	Msa1427810	-0.848998	4.287142e-60	-8.615850e-47
Msa0437330	Msa1427810	0.991081	8.561827e-186	-8.615850e-47
Msa0454940	Msa1427810	0.806546	7.803758e-50	-8.615850e-47
Msa0987860	Msa1427810	0.801922	7.164444e-49	-8.615850e-47
Msa1006680	Msa1427810	0.803145	4.009184e-49	-8.615850e-47
Msa1008340	Msa1427810	0.817294	3.552249e-52	-8.615850e-47
Msa1009170	Msa1427810	0.835524	1.596396e-56	-8.615850e-47
Msa1009200	Msa1427810	0.816343	5.807347e-52	-8.615850e-47
Msa1009220	Msa1427810	0.837056	6.508426e-57	-8.615850e-47
Msa1036360	Msa1427810	0.838343	3.043320e-57	-8.615850e-47
Msa1037710	Msa1427810	0.832880	7.345216e-56	-8.615850e-47
Msa1049950	Msa1427810	0.811698	6.147718e-51	-8.615850e-47
Msa1050500	Msa1427810	0.806540	7.827932e-50	-8.615850e-47
Msa1076640	Msa1427810	0.833557	4.980100e-56	-8.615850e-47
Msa1091730	Msa1427810	0.804631	1.969176e-49	-8.615850e-47
Msa1098340	Msa1427810	0.808935	2.425342e-50	-8.615850e-47
Msa1098380	Msa1427810	0.830196	3.364320e-55	-8.615850e-47
Msa0243940	Msa1427810	0.806191	9.273517e-50	-8.615850e-47
Msa0245870	Msa1427810	0.812707	3.702268e-51	-8.615850e-47
Msa0254190	Msa1427810	0.804982	1.662973e-49	-8.615850e-47
Msa0256270	Msa1427810	0.812515	4.077546e-51	-8.615850e-47
Msa0264940	Msa1427810	-0.800635	1.314178e-48	-8.615850e-47
Msa0302990	Msa1427810	-0.805543	1.268578e-49	-8.615850e-47
Msa0327860	Msa1427810	0.817082	3.964847e-52	-8.615850e-47
Msa1130350	Msa1427810	0.973982	2.321877e-137	-8.615850e-47
Msa1130630	Msa1427810	0.994332	2.153497e-206	-8.615850e-47
Msa1135660	Msa1427810	0.811597	6.464341e-51	-8.615850e-47
Msa1138450	Msa1427810	0.819992	8.676943e-53	-8.615850e-47
Msa1138480	Msa1427810	0.832307	1.018566e-55	-8.615850e-47
Msa1138490	Msa1427810	0.824899	6.286176e-54	-8.615850e-47
Msa1138500	Msa1427810	0.804618	1.981752e-49	-8.615850e-47
Msa1139240	Msa1427810	0.810963	8.877140e-51	-8.615850e-47
Msa1140460	Msa1427810	0.810784	9.704885e-51	-8.615850e-47
Msa1141250	Msa1427810	-0.808360	3.217718e-50	-8.615850e-47
Msa1181400	Msa1427810	0.813204	2.880852e-51	-8.615850e-47
Msa1182830	Msa1427810	0.802999	4.298020e-49	-8.615850e-47
Msa1199750	Msa1427810	0.802579	5.245928e-49	-8.615850e-47
Msa1204430	Msa1427810	0.819744	9.889795e-53	-8.615850e-47
Msa0501470	Msa1427810	0.823269	1.516816e-53	-8.615850e-47
Msa0544930	Msa1427810	0.800098	1.690387e-48	-8.615850e-47
Msa0563140	Msa1427810	0.805312	1.418770e-49	-8.615850e-47
Msa0589610	Msa1427810	0.847101	1.430916e-59	-8.615850e-47
Msa0849130	Msa1427810	0.803386	3.572746e-49	-8.615850e-47
Msa0867810	Msa1427810	0.817746	2.810340e-52	-8.615850e-47
Msa0883350	Msa1427810	0.848235	6.976009e-60	-8.615850e-47
Msa0883390	Msa1427810	0.813970	1.954300e-51	-8.615850e-47
Msa0883410	Msa1427810	0.822069	2.884436e-53	-8.615850e-47
Msa0883450	Msa1427810	0.800427	1.448957e-48	-8.615850e-47
Msa0883660	Msa1427810	0.855004	8.434299e-62	-8.615850e-47
Msa0883670	Msa1427810	0.810026	1.414219e-50	-8.615850e-47
Msa0906360	Msa1427810	0.811746	6.002117e-51	-8.615850e-47
Msa0912160	Msa1427810	0.801693	7.984310e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427810	MtrunA17_Chr7g0275531	81.544	298	15	4	1	265	1	291	2.13e-166	466
Msa1427810	MtrunA17_Chr8g0347251	45.977	261	112	7	1	245	1	248	3.67e-62	201
Msa1427810	MtrunA17_Chr3g0126391	53.125	192	67	9	12	185	7	193	1.70e-53	178
Msa1427810	MtrunA17_Chr8g0387981	44.103	195	98	5	1	186	1	193	1.03e-41	148
Msa1427810	MtrunA17_Chr7g0244981	30.363	303	156	11	9	297	11	272	2.14e-26	105
Msa1427810	MtrunA17_Chr7g0244971	32.275	189	97	5	9	184	12	182	6.14e-25	102
Msa1427810	MtrunA17_Chr8g0334541	36.364	176	85	5	15	184	8	162	4.96e-24	99.4
Msa1427810	MtrunA17_Chr2g0315371	30.882	204	105	6	5	184	9	200	1.18e-20	90.5
Msa1427810	MtrunA17_Chr8g0350621	30.556	180	96	7	15	184	10	170	4.09e-20	88.2
Msa1427810	MtrunA17_Chr3g0128671	31.492	181	93	5	18	184	23	186	1.11e-19	87.8
Msa1427810	MtrunA17_Chr5g0428351	31.892	185	101	6	7	189	87	248	1.82e-19	87.4
Msa1427810	MtrunA17_Chr2g0315381	45.349	86	37	2	100	184	127	203	1.69e-18	84.3
Msa1427810	MtrunA17_Chr2g0315361	45.349	86	38	2	99	184	131	207	2.62e-17	80.9
Msa1427810	MtrunA17_Chr1g0147881	43.529	85	44	2	98	182	237	317	2.14e-16	79.0
Msa1427810	MtrunA17_Chr7g0270051	40.870	115	63	3	78	189	3	115	2.75e-16	77.4
Msa1427810	MtrunA17_Chr7g0224801	55.224	67	25	2	124	190	92	153	1.63e-15	73.2
Msa1427810	MtrunA17_Chr7g0270191	40.594	101	56	2	88	187	107	204	2.30e-15	75.5
Msa1427810	MtrunA17_Chr4g0071521	32.624	141	72	3	42	182	183	300	3.83e-15	75.1
Msa1427810	MtrunA17_Chr8g0348311	53.226	62	25	2	126	187	156	213	4.59e-15	75.1
Msa1427810	MtrunA17_Chr8g0387501	47.297	74	33	3	121	194	125	192	4.83e-15	73.9
Msa1427810	MtrunA17_Chr8g0379461	36.885	122	65	3	99	215	45	159	5.18e-15	73.6
Msa1427810	MtrunA17_Chr7g0248691	36.184	152	80	6	95	244	131	267	2.50e-14	72.8
Msa1427810	MtrunA17_Chr5g0401821	54.386	57	24	1	126	182	200	254	3.31e-14	71.6
Msa1427810	MtrunA17_Chr2g0319961	43.750	96	48	3	99	190	50	143	5.18e-14	70.9
Msa1427810	MtrunA17_Chr2g0293481	41.748	103	52	4	126	222	268	368	5.56e-14	72.4
Msa1427810	MtrunA17_Chr5g0418781	50.000	68	30	2	124	191	123	186	9.41e-14	70.5
Msa1427810	MtrunA17_Chr2g0284321	46.479	71	32	2	126	196	36	100	9.70e-14	69.3
Msa1427810	MtrunA17_Chr1g0184691	52.632	57	25	1	126	182	294	348	2.46e-13	70.1
Msa1427810	MtrunA17_Chr8g0386241	46.269	67	31	2	124	190	102	163	3.49e-13	67.0
Msa1427810	MtrunA17_Chr1g0194481	50.000	64	27	2	124	187	157	215	5.25e-13	68.9
Msa1427810	MtrunA17_Chr7g0228941	52.632	57	25	1	126	182	53	107	5.60e-13	65.1
Msa1427810	MtrunA17_Chr5g0443131	49.153	59	27	1	124	182	156	211	5.85e-13	68.6
Msa1427810	MtrunA17_Chr4g0053281	50.877	57	26	1	126	182	267	321	6.43e-13	68.6
Msa1427810	MtrunA17_Chr3g0079691	42.308	78	39	3	117	194	272	343	6.44e-13	69.3
Msa1427810	MtrunA17_Chr4g0051881	47.143	70	32	2	124	193	177	241	6.86e-13	68.6
Msa1427810	MtrunA17_Chr4g0042831	44.118	68	35	1	125	192	145	209	7.13e-13	68.9
Msa1427810	MtrunA17_Chr4g0042831	44.776	67	34	1	124	190	277	340	1.92e-11	64.3
Msa1427810	MtrunA17_Chr2g0294231	48.438	64	30	1	124	187	202	262	9.29e-13	68.6
Msa1427810	MtrunA17_Chr3g0129361	44.444	72	37	1	112	183	131	199	1.30e-12	66.2
Msa1427810	MtrunA17_Chr7g0238921	46.753	77	33	3	106	182	110	178	1.39e-12	67.4
Msa1427810	MtrunA17_Chr8g0383351	50.847	59	26	1	124	182	159	214	1.52e-12	66.2
Msa1427810	MtrunA17_Chr7g0263531	32.824	131	78	4	126	254	190	312	1.55e-12	67.8
Msa1427810	MtrunA17_Chr5g0418191	46.269	67	33	1	124	190	319	382	1.68e-12	67.8
Msa1427810	MtrunA17_Chr5g0418191	35.652	115	65	4	125	239	151	256	5.16e-11	63.2
Msa1427810	MtrunA17_Chr5g0431811	39.535	86	47	2	125	206	672	756	2.19e-12	68.2
Msa1427810	MtrunA17_Chr7g0218081	46.875	64	30	2	125	188	228	287	2.44e-12	67.4
Msa1427810	MtrunA17_Chr7g0218081	44.776	67	34	1	124	190	409	472	7.27e-12	66.2
Msa1427810	MtrunA17_Chr5g0445311	44.776	67	34	1	124	190	363	426	3.45e-12	67.0
Msa1427810	MtrunA17_Chr5g0445311	45.833	72	33	3	123	194	198	263	5.64e-12	66.6
Msa1427810	MtrunA17_Chr3g0139021	52.632	57	25	1	126	182	315	369	3.67e-12	66.6
Msa1427810	MtrunA17_Chr1g0202461	44.928	69	32	2	126	194	262	324	3.94e-12	66.6
Msa1427810	MtrunA17_Chr3g0101131	47.143	70	31	3	125	194	243	306	4.60e-12	66.6
Msa1427810	MtrunA17_Chr3g0101131	44.776	67	34	1	124	190	414	477	8.22e-12	65.9
Msa1427810	MtrunA17_Chr8g0335811	45.070	71	36	1	112	182	141	208	6.02e-12	64.3
Msa1427810	MtrunA17_Chr4g0068541	45.312	64	32	1	124	187	207	267	7.89e-12	65.9
Msa1427810	MtrunA17_Chr7g0249311	44.615	65	32	2	125	189	179	239	2.08e-11	64.7
Msa1427810	MtrunA17_Chr7g0248721	50.000	64	26	3	124	187	140	197	2.78e-11	62.4
Msa1427810	MtrunA17_Chr5g0432161	44.776	67	34	1	124	190	420	483	5.59e-11	63.5
Msa1427810	MtrunA17_Chr2g0322391	48.485	66	32	1	124	189	348	411	5.95e-11	63.5
Msa1427810	MtrunA17_Chr1g0150801	38.824	85	45	3	107	189	82	161	7.37e-11	60.1
Msa1427810	MtrunA17_Chr3g0106491	43.284	67	35	1	124	190	364	427	9.56e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1427810	AT4G11070.1	49.763	211	77	8	8	195	7	211	6.39e-49	166
Msa1427810	AT4G11070.2	48.691	191	77	6	8	195	7	179	1.99e-44	153
Msa1427810	AT4G23810.1	40.948	232	80	8	11	195	13	234	3.14e-43	151
Msa1427810	AT5G24110.1	42.929	198	90	6	12	209	17	191	9.74e-43	150
Msa1427810	AT2G46400.1	37.975	237	123	6	12	246	8	222	1.15e-35	131
Msa1427810	AT3G56400.1	32.995	197	98	5	3	184	2	179	9.05e-27	107
Msa1427810	AT2G40750.1	27.500	280	161	8	5	246	8	283	7.26e-24	100
Msa1427810	AT2G40740.1	42.202	109	61	1	99	205	145	253	2.85e-22	95.1
Msa1427810	AT2G40740.3	42.202	109	61	1	99	205	154	262	3.32e-22	95.1
Msa1427810	AT5G45260.1	47.423	97	41	4	99	195	1188	1274	1.22e-18	87.4
Msa1427810	AT1G66550.1	29.282	181	90	6	16	184	13	167	6.32e-16	76.6
Msa1427810	AT1G66600.1	40.909	88	45	1	104	184	75	162	1.94e-15	75.1
Msa1427810	AT5G52830.1	54.839	62	26	1	126	187	166	225	2.40e-15	76.3
Msa1427810	AT1G29280.1	53.226	62	25	2	126	187	75	132	5.97e-15	73.9
Msa1427810	AT1G66550.2	28.333	180	88	6	16	184	13	162	1.16e-14	73.2
Msa1427810	AT4G31550.2	44.048	84	43	2	99	182	221	300	1.52e-14	73.6
Msa1427810	AT5G49520.1	50.000	64	29	1	124	187	220	280	1.85e-14	73.9
Msa1427810	AT4G31550.1	54.386	57	24	1	126	182	247	301	4.65e-14	72.4
Msa1427810	AT4G01250.1	51.613	62	26	2	126	187	129	186	9.03e-14	71.2
Msa1427810	AT2G30590.1	50.794	63	27	2	126	188	314	372	1.07e-13	71.6
Msa1427810	AT1G30650.1	41.905	105	48	6	95	194	184	280	1.09e-13	71.6
Msa1427810	AT2G34830.1	35.938	128	58	6	78	187	152	273	1.40e-13	71.6
Msa1427810	AT2G34830.2	35.938	128	58	6	78	187	161	282	1.42e-13	71.6
Msa1427810	AT1G66560.1	46.667	60	32	0	125	184	103	162	1.67e-13	69.7
Msa1427810	AT1G69310.4	40.476	84	47	1	99	182	121	201	2.77e-13	69.7
Msa1427810	AT1G69310.2	40.476	84	47	1	99	182	121	201	2.77e-13	69.7
Msa1427810	AT1G69310.1	40.476	84	47	1	99	182	121	201	2.77e-13	69.7
Msa1427810	AT2G37260.2	35.345	116	60	3	72	182	216	321	4.64e-13	69.3
Msa1427810	AT2G37260.3	35.345	116	60	3	72	182	218	323	4.74e-13	69.3
Msa1427810	AT2G24570.1	54.386	57	24	1	126	182	244	298	4.80e-13	69.3
Msa1427810	AT2G37260.1	35.345	116	60	3	72	182	298	403	5.75e-13	69.7
Msa1427810	AT3G58710.2	41.053	95	50	3	99	189	40	132	8.70e-13	67.8
Msa1427810	AT5G13080.1	51.562	64	26	2	124	187	66	124	9.40e-13	65.5
Msa1427810	AT1G29860.1	40.476	84	45	2	110	193	121	199	1.29e-12	67.4
Msa1427810	AT4G24240.1	41.667	84	45	2	99	182	257	336	1.37e-12	68.2
Msa1427810	AT3G58710.1	46.875	64	32	1	126	189	72	133	1.41e-12	67.4
Msa1427810	AT2G23320.1	50.877	57	26	1	126	182	241	295	1.56e-12	67.8
Msa1427810	AT2G47260.1	37.778	90	53	1	98	187	147	233	1.93e-12	67.4
Msa1427810	AT4G23550.1	47.458	59	29	1	124	182	139	195	2.10e-12	67.4
Msa1427810	AT5G41570.1	43.421	76	38	2	112	187	85	155	2.23e-12	65.1
Msa1427810	AT5G01900.1	29.412	153	97	5	126	274	111	256	2.30e-12	66.6
Msa1427810	AT2G46130.1	48.438	64	28	2	124	187	29	87	2.33e-12	63.2
Msa1427810	AT5G28650.1	52.632	57	25	1	126	182	263	317	2.38e-12	67.4
Msa1427810	AT1G64000.1	40.659	91	43	3	112	196	101	186	2.76e-12	65.1
Msa1427810	AT4G18170.1	35.238	105	63	2	83	187	130	229	3.33e-12	66.6
Msa1427810	AT1G80590.1	39.241	79	45	1	112	187	69	147	3.57e-12	65.5
Msa1427810	AT2G44745.1	45.070	71	36	1	112	182	132	199	8.16e-12	64.3
Msa1427810	AT3G01970.1	48.529	68	30	2	124	191	64	126	8.94e-12	62.8
Msa1427810	AT2G25000.2	44.776	67	35	1	123	189	101	165	9.19e-12	64.3
Msa1427810	AT2G25000.4	44.776	67	35	1	123	189	101	165	9.19e-12	64.3
Msa1427810	AT3G62340.1	48.438	64	30	1	124	187	117	177	9.22e-12	65.1
Msa1427810	AT4G26640.7	45.714	70	32	3	125	194	171	234	9.90e-12	66.2
Msa1427810	AT4G26640.7	44.776	67	34	1	124	190	340	403	1.97e-11	65.1
Msa1427810	AT4G26640.5	45.070	71	33	3	124	194	34	98	1.02e-11	65.9
Msa1427810	AT4G26640.5	44.776	67	34	1	124	190	204	267	2.28e-11	64.7
Msa1427810	AT4G26640.6	45.070	71	33	3	124	194	34	98	1.02e-11	65.9
Msa1427810	AT4G26640.6	44.776	67	34	1	124	190	204	267	2.28e-11	64.7
Msa1427810	AT4G26640.4	45.070	71	33	3	124	194	34	98	1.02e-11	65.9
Msa1427810	AT4G26640.4	44.776	67	34	1	124	190	204	267	2.28e-11	64.7
Msa1427810	AT4G26640.3	45.070	71	33	3	124	194	34	98	1.02e-11	65.9
Msa1427810	AT4G26640.3	44.776	67	34	1	124	190	204	267	2.28e-11	64.7
Msa1427810	AT5G46350.1	46.875	64	29	2	124	187	182	240	1.02e-11	65.5
Msa1427810	AT2G25000.3	44.776	67	35	1	123	189	123	187	1.05e-11	64.3
Msa1427810	AT4G26640.2	45.714	70	32	3	125	194	211	274	1.06e-11	65.9
Msa1427810	AT4G26640.2	44.776	67	34	1	124	190	380	443	2.28e-11	65.1
Msa1427810	AT2G25000.1	44.776	67	35	1	123	189	144	208	1.11e-11	64.7
Msa1427810	AT1G13960.1	46.875	64	30	2	125	188	229	288	1.14e-11	65.9
Msa1427810	AT1G13960.1	47.458	59	28	1	124	182	408	463	1.52e-11	65.5
Msa1427810	AT3G04670.1	50.877	57	26	1	126	182	263	317	1.15e-11	65.1
Msa1427810	AT4G26640.1	45.714	70	32	3	125	194	139	202	1.17e-11	65.9
Msa1427810	AT4G26640.1	44.776	67	34	1	124	190	308	371	2.41e-11	64.7
Msa1427810	AT4G26440.1	50.794	63	27	2	125	187	178	236	1.40e-11	65.9
Msa1427810	AT4G26440.1	46.269	67	33	1	124	190	371	434	2.94e-11	64.7
Msa1427810	AT1G13960.2	46.875	64	30	2	125	188	76	135	1.57e-11	65.1
Msa1427810	AT1G13960.2	47.458	59	28	1	124	182	255	310	1.80e-11	64.7
Msa1427810	AT3G01080.3	48.438	64	29	2	125	188	205	264	1.71e-11	64.7
Msa1427810	AT2G04880.2	44.304	79	36	4	119	197	105	175	1.71e-11	65.1
Msa1427810	AT2G04880.2	40.299	67	37	1	124	190	282	345	4.86e-11	63.9
Msa1427810	AT2G04880.1	44.304	79	36	4	119	197	105	175	1.71e-11	65.5
Msa1427810	AT2G04880.1	40.299	67	37	1	124	190	306	369	5.84e-11	63.5
Msa1427810	AT2G03340.1	45.455	66	32	2	125	190	250	311	1.73e-11	65.5
Msa1427810	AT2G03340.1	43.284	67	35	1	124	190	414	477	3.51e-11	64.3
Msa1427810	AT3G01080.2	46.970	66	31	2	125	190	205	266	2.20e-11	65.1
Msa1427810	AT3G01080.1	46.970	66	31	2	125	190	167	228	2.23e-11	64.7
Msa1427810	AT4G39410.1	41.667	84	45	2	99	182	198	277	2.89e-11	63.9
Msa1427810	AT5G45050.4	39.759	83	46	2	108	190	1026	1104	3.99e-11	64.7
Msa1427810	AT5G45050.1	39.759	83	46	2	108	190	1165	1243	4.00e-11	64.7
Msa1427810	AT5G45050.2	39.759	83	46	2	108	190	1137	1215	4.44e-11	64.7
Msa1427810	AT5G07100.2	47.458	59	28	1	124	182	140	195	5.07e-11	62.0
Msa1427810	AT5G07100.2	42.857	70	35	2	125	194	24	88	8.50e-11	61.2
Msa1427810	AT5G07100.4	47.458	59	28	1	124	182	140	195	5.07e-11	62.0
Msa1427810	AT5G07100.4	42.857	70	35	2	125	194	24	88	8.50e-11	61.2
Msa1427810	AT5G07100.5	47.458	59	28	1	124	182	140	195	5.07e-11	62.0
Msa1427810	AT5G07100.5	42.857	70	35	2	125	194	24	88	8.50e-11	61.2
Msa1427810	AT5G07100.3	47.458	59	28	1	124	182	140	195	5.07e-11	62.0
Msa1427810	AT5G07100.3	42.857	70	35	2	125	194	24	88	8.50e-11	61.2
Msa1427810	AT5G07100.1	47.458	59	28	1	124	182	233	288	5.22e-11	63.2
Msa1427810	AT4G01720.1	37.963	108	60	4	81	187	196	297	5.54e-11	63.9
Msa1427810	AT2G21900.1	40.299	67	37	1	123	189	107	170	6.83e-11	61.2
Msa1427810	AT2G40740.2	45.902	61	33	0	145	205	149	209	7.41e-11	62.0

Find 73 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTCTATGATGACCTCACTTT+TGG	0.188414	tig0026223:+8807	None:intergenic
TCAACATAGTAAGTGCTTTC+TGG	0.207919	tig0026223:+8905	None:intergenic
TCCCTCAAAGTTAAAGATAA+AGG	0.227041	tig0026223:-7628	Msa1427810:CDS
CTCAAGCTAAGCCTTTAAAA+AGG	0.231958	tig0026223:-7656	Msa1427810:CDS
ATTCTGAAGTTGGTCCATTT+TGG	0.232813	tig0026223:+7377	Msa1427800:CDS
CAAGAATTCATTGGTTTCAT+TGG	0.239108	tig0026223:+8951	None:intergenic
TTCACTTGTTCCTTCCATTT+AGG	0.269402	tig0026223:+8452	None:intergenic
CATTGGATGATATAATTATA+TGG	0.275590	tig0026223:+8968	None:intergenic
AGGATTATCTGAAGGGTCTT+TGG	0.285031	tig0026223:-8414	Msa1427810:CDS
CCGAGGGAAAATACCCTCTT+TGG	0.291656	tig0026223:+7494	None:intergenic
CTTTCCTTGGATTAATTCAT+TGG	0.302740	tig0026223:+9014	None:intergenic
TGCAATGGATTATGCCAAAA+TGG	0.316401	tig0026223:-7391	Msa1427810:CDS
CCCTCAAAGTTAAAGATAAA+GGG	0.333691	tig0026223:-7627	Msa1427810:CDS
CCCTTTATCTTTAACTTTGA+GGG	0.337711	tig0026223:+7627	None:intergenic
GCAGAAAGAGCATGCCTAAA+TGG	0.338464	tig0026223:-8466	Msa1427810:intron
TCTATCATATCTGAAGATTC+TGG	0.355512	tig0026223:+7301	Msa1427800:CDS
TATGGTCAAAAGGATATTCT+TGG	0.360560	tig0026223:-8368	Msa1427810:CDS
TTGTAAAATGATAATGAAGA+TGG	0.362503	tig0026223:+9077	None:intergenic
GAATATAGCTGGAGAAAATA+TGG	0.367378	tig0026223:-8386	Msa1427810:CDS
GCCCTTTATCTTTAACTTTG+AGG	0.367772	tig0026223:+7626	None:intergenic
TTTGAACCTGCTTTGTTGCT+AGG	0.370195	tig0026223:+7742	None:intergenic
TAAGTTACCTCAATTATTGT+TGG	0.376442	tig0026223:+7705	None:intergenic
TACAGTGGAATTACACCAAA+TGG	0.381883	tig0026223:-7341	Msa1427810:CDS
CACAATTCTAGATAATGAAA+TGG	0.400967	tig0026223:-7200	Msa1427810:CDS
TTTGTCAATCAAGAATTCAT+TGG	0.407531	tig0026223:+8942	None:intergenic
GCTTTGCTAACTCCTTTCCT+TGG	0.408135	tig0026223:+9001	None:intergenic
TGTGAAATTGTTGCAGAAGT+TGG	0.430734	tig0026223:+7219	Msa1427800:intron
GGACTCTCGTTTGTAAAAGA+AGG	0.431784	tig0026223:+8829	None:intergenic
GTGATATCAGATTCTGAAGT+TGG	0.434696	tig0026223:+7367	Msa1427800:CDS
TACAGATGCACACATAGAAA+TGG	0.436912	tig0026223:-7774	Msa1427810:CDS
AATGAAGATGGGCACTTAAG+TGG	0.450326	tig0026223:+9089	None:intergenic
GTGAAATTGTTGCAGAAGTT+GGG	0.458089	tig0026223:+7220	Msa1427800:intron
TATGCCAAGTTGGACCCATT+TGG	0.459164	tig0026223:+7326	Msa1427800:CDS
TTTAACATCAAGTTCTGCCT+TGG	0.466903	tig0026223:+7536	None:intergenic
CTGGAGAAAATATGGTCAAA+AGG	0.471109	tig0026223:-8378	Msa1427810:CDS
GGAGAGACTAAGACCATTGA+TGG	0.480847	tig0026223:-8871	Msa1427810:CDS
GACCATTGATGGTAAAATGA+AGG	0.490394	tig0026223:-8860	Msa1427810:CDS
TGTAAAATGATAATGAAGAT+GGG	0.499849	tig0026223:+9078	None:intergenic
ACAATGCTCTCTTCAAGAAA+AGG	0.501466	tig0026223:-8771	Msa1427810:intron
TACACCAAATGGGTCCAACT+TGG	0.504596	tig0026223:-7330	Msa1427810:CDS
TTGTCAGAATATCAATGCAA+TGG	0.515691	tig0026223:-7406	Msa1427810:intron
CTTTGGATGATGAATATAGC+TGG	0.515960	tig0026223:-8397	Msa1427810:CDS
GAGCATTGTGGTTAAACTCC+TGG	0.533299	tig0026223:+8785	None:intergenic
TGAAGATCCAACAATAATTG+AGG	0.540253	tig0026223:-7712	Msa1427810:CDS
AGAGACTAGTTTCACTTCCA+AGG	0.541625	tig0026223:-7553	Msa1427810:CDS
ACAGTGGAATTACACCAAAT+GGG	0.546883	tig0026223:-7340	Msa1427810:CDS
GATTCTGGTATATGCCAAGT+TGG	0.548854	tig0026223:+7316	Msa1427800:CDS
ATCTGATATCACTGATACAG+TGG	0.554755	tig0026223:-7356	Msa1427810:CDS
CAGAGGAGTTGCTTAGTGAA+AGG	0.561520	tig0026223:+9141	None:intergenic
GCACTTAAGTGGAGTAATGA+AGG	0.561732	tig0026223:+9100	None:intergenic
TAGCAACAAAGCAGGTTCAA+AGG	0.565187	tig0026223:-7740	Msa1427810:CDS
CAATTTCAGAAATCGAAGAC+TGG	0.566565	tig0026223:-7252	Msa1427810:CDS
CATAGTAAGTGCTTTCTGGT+AGG	0.575281	tig0026223:+8909	None:intergenic
CAATGAATTAATCCAAGGAA+AGG	0.585373	tig0026223:-9013	Msa1427810:CDS
CTTACTATGTTGAATGTGAG+AGG	0.591736	tig0026223:-8895	Msa1427810:CDS
GAGTGTGAAATAATAGACAG+AGG	0.601050	tig0026223:+9124	None:intergenic
AAAGAGCATGCCTAAATGGA+AGG	0.601574	tig0026223:-8462	Msa1427810:CDS
GTGAAGATTTGCACAAACAC+AGG	0.602509	tig0026223:-8434	Msa1427810:CDS
ATAACCAATGAATTAATCCA+AGG	0.604601	tig0026223:-9018	Msa1427810:CDS
AGGGTGCCTAGCAACAAAGC+AGG	0.623925	tig0026223:-7748	Msa1427810:CDS
ACAAACACAGGATTATCTGA+AGG	0.625241	tig0026223:-8422	Msa1427810:CDS
TAGTGAAAGGTGAGACGAAG+GGG	0.627360	tig0026223:+9154	None:intergenic
AAGTGAGGTCATCATAGACC+AGG	0.627405	tig0026223:-8803	Msa1427810:CDS
CTTAGTGAAAGGTGAGACGA+AGG	0.627674	tig0026223:+9152	None:intergenic
CAAACACAGGATTATCTGAA+GGG	0.645284	tig0026223:-8421	Msa1427810:CDS
AAACGAGAGTCCCAAAAGTG+AGG	0.654222	tig0026223:-8818	Msa1427810:CDS
ATAATTGAGGTAACTTACAG+AGG	0.655185	tig0026223:-7699	Msa1427810:CDS
GACTTAGAAGAAACCAAAGA+GGG	0.656480	tig0026223:-7507	Msa1427810:intron
TTAGTGAAAGGTGAGACGAA+GGG	0.668436	tig0026223:+9153	None:intergenic
ACTATGTTGAATGTGAGAGG+AGG	0.670945	tig0026223:-8892	Msa1427810:CDS
TGACTTAGAAGAAACCAAAG+AGG	0.672282	tig0026223:-7508	Msa1427810:CDS
TGCACACATAGAAATGGACA+AGG	0.697085	tig0026223:-7768	Msa1427810:CDS
GCACACATAGAAATGGACAA+GGG	0.758330	tig0026223:-7767	Msa1427810:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTAATAATATTTGTTTTAG+TGG	-	tig0026223:8064-8083	Msa1427810:intron	10.0%
!!!	ACTTTTTTGTTAAATATTTA+AGG	-	tig0026223:8238-8257	Msa1427810:intron	10.0%
!!!	ATTAATAATATTTGTTTTAG+TGG	-	tig0026223:8064-8083	Msa1427810:intron	10.0%
!!!	ACTTTTTTGTTAAATATTTA+AGG	-	tig0026223:8238-8257	Msa1427810:intron	10.0%
!!!	CATTATCATTTTACAAAAAA+TGG	-	tig0026223:7262-7281	Msa1427810:CDS	15.0%
!!	CTATGTTAATAAAAAAGTTA+AGG	+	tig0026223:7661-7680	None:intergenic	15.0%
!!	AAATGATACTTGTAATAAAA+CGG	-	tig0026223:7735-7754	Msa1427810:CDS	15.0%
!!!	AAATGTTTTCACAATTTTAT+TGG	-	tig0026223:8516-8535	Msa1427810:intron	15.0%
!!!	CATTATCATTTTACAAAAAA+TGG	-	tig0026223:7262-7281	Msa1427810:CDS	15.0%
!!	CTATGTTAATAAAAAAGTTA+AGG	+	tig0026223:7661-7680	None:intergenic	15.0%
!!	AAATGATACTTGTAATAAAA+CGG	-	tig0026223:7735-7754	Msa1427810:CDS	15.0%
!!!	AAATGTTTTCACAATTTTAT+TGG	-	tig0026223:8516-8535	Msa1427810:intron	15.0%
!!!	TGTAAAATGATAATGAAGAT+GGG	+	tig0026223:7257-7276	Msa1427800:CDS	20.0%
!!!	TTGTAAAATGATAATGAAGA+TGG	+	tig0026223:7258-7277	Msa1427800:CDS	20.0%
!!	CATTGGATGATATAATTATA+TGG	+	tig0026223:7367-7386	Msa1427800:CDS	20.0%
!!	TATGTAATCATTTGAATTTG+TGG	-	tig0026223:7842-7861	Msa1427810:intron	20.0%
!!!	ATATTGCTCAACTATTTTTT+TGG	-	tig0026223:8199-8218	Msa1427810:intron	20.0%
!!!	TGCACTATTTGTTAATAATA+AGG	-	tig0026223:8308-8327	Msa1427810:intron	20.0%
!!!	TTCAACATTTGTATTGTTTT+CGG	-	tig0026223:8407-8426	Msa1427810:CDS	20.0%
!!!	TTTTCACAATTTTATTGGTT+TGG	-	tig0026223:8521-8540	Msa1427810:intron	20.0%
!!!	TGTAAAATGATAATGAAGAT+GGG	+	tig0026223:7257-7276	Msa1427800:CDS	20.0%
!!!	TTGTAAAATGATAATGAAGA+TGG	+	tig0026223:7258-7277	Msa1427800:CDS	20.0%
!!	CATTGGATGATATAATTATA+TGG	+	tig0026223:7367-7386	Msa1427800:CDS	20.0%
!!	TATGTAATCATTTGAATTTG+TGG	-	tig0026223:7842-7861	Msa1427810:intron	20.0%
!!!	ATATTGCTCAACTATTTTTT+TGG	-	tig0026223:8199-8218	Msa1427810:intron	20.0%
!!!	TGCACTATTTGTTAATAATA+AGG	-	tig0026223:8308-8327	Msa1427810:intron	20.0%
!!!	TTCAACATTTGTATTGTTTT+CGG	-	tig0026223:8407-8426	Msa1427810:CDS	20.0%
!!!	TTTTCACAATTTTATTGGTT+TGG	-	tig0026223:8521-8540	Msa1427810:intron	20.0%
!	ATAACCAATGAATTAATCCA+AGG	-	tig0026223:7314-7333	Msa1427810:CDS	25.0%
!	TTTGTCAATCAAGAATTCAT+TGG	+	tig0026223:7393-7412	Msa1427800:CDS	25.0%
!!!	AAGCGTTTTGAATTTGATAT+AGG	-	tig0026223:8102-8121	Msa1427810:intron	25.0%
!!!	CAATATTGATTTGGTTAACA+TGG	+	tig0026223:8185-8204	None:intergenic	25.0%
!!	ATAGTTGAGCAATATTGATT+TGG	+	tig0026223:8194-8213	None:intergenic	25.0%
!	ATCTTGAGTAATGAAATAGA+AGG	+	tig0026223:8287-8306	None:intergenic	25.0%
!	TAAGTTACCTCAATTATTGT+TGG	+	tig0026223:8630-8649	None:intergenic	25.0%
!!	TCATTTTCTGATTCAATTGA+TGG	+	tig0026223:8879-8898	None:intergenic	25.0%
!	ATCAGAAAATGAGATAATGA+TGG	-	tig0026223:8887-8906	Msa1427810:CDS	25.0%
!	CACAATTCTAGATAATGAAA+TGG	-	tig0026223:9132-9151	Msa1427810:five_prime_UTR	25.0%
!	ATAACCAATGAATTAATCCA+AGG	-	tig0026223:7314-7333	Msa1427810:CDS	25.0%
!	TTTGTCAATCAAGAATTCAT+TGG	+	tig0026223:7393-7412	Msa1427800:CDS	25.0%
!!!	AAGCGTTTTGAATTTGATAT+AGG	-	tig0026223:8102-8121	Msa1427810:intron	25.0%
!!!	CAATATTGATTTGGTTAACA+TGG	+	tig0026223:8185-8204	None:intergenic	25.0%
!!	ATAGTTGAGCAATATTGATT+TGG	+	tig0026223:8194-8213	None:intergenic	25.0%
!	ATCTTGAGTAATGAAATAGA+AGG	+	tig0026223:8287-8306	None:intergenic	25.0%
!	TAAGTTACCTCAATTATTGT+TGG	+	tig0026223:8630-8649	None:intergenic	25.0%
!!	TCATTTTCTGATTCAATTGA+TGG	+	tig0026223:8879-8898	None:intergenic	25.0%
!	ATCAGAAAATGAGATAATGA+TGG	-	tig0026223:8887-8906	Msa1427810:CDS	25.0%
!	CACAATTCTAGATAATGAAA+TGG	-	tig0026223:9132-9151	Msa1427810:five_prime_UTR	25.0%
	CTTTCCTTGGATTAATTCAT+TGG	+	tig0026223:7321-7340	Msa1427800:CDS	30.0%
	CAATGAATTAATCCAAGGAA+AGG	-	tig0026223:7319-7338	Msa1427810:CDS	30.0%
!!	CAAGAATTCATTGGTTTCAT+TGG	+	tig0026223:7384-7403	Msa1427800:CDS	30.0%
!	ATCCTTCATTTTACCATCAA+TGG	+	tig0026223:7477-7496	None:intergenic	30.0%
	GAATATAGCTGGAGAAAATA+TGG	-	tig0026223:7946-7965	Msa1427810:intron	30.0%
	TATGGTCAAAAGGATATTCT+TGG	-	tig0026223:7964-7983	Msa1427810:intron	30.0%
!	AGAAGACAAAGTGCTTATTA+AGG	-	tig0026223:8357-8376	Msa1427810:CDS	30.0%
	TGAAGATCCAACAATAATTG+AGG	-	tig0026223:8620-8639	Msa1427810:intron	30.0%
	ATAATTGAGGTAACTTACAG+AGG	-	tig0026223:8633-8652	Msa1427810:intron	30.0%
!	TCAAGCTAAGCCTTTAAAAA+GGG	-	tig0026223:8677-8696	Msa1427810:intron	30.0%
	TCCCTCAAAGTTAAAGATAA+AGG	-	tig0026223:8704-8723	Msa1427810:intron	30.0%
!	CCCTTTATCTTTAACTTTGA+GGG	+	tig0026223:8708-8727	None:intergenic	30.0%
	CCCTCAAAGTTAAAGATAAA+GGG	-	tig0026223:8705-8724	Msa1427810:intron	30.0%
	TTGTCAGAATATCAATGCAA+TGG	-	tig0026223:8926-8945	Msa1427810:CDS	30.0%
	TCTATCATATCTGAAGATTC+TGG	+	tig0026223:9034-9053	None:intergenic	30.0%
	CTTTCCTTGGATTAATTCAT+TGG	+	tig0026223:7321-7340	Msa1427800:CDS	30.0%
	CAATGAATTAATCCAAGGAA+AGG	-	tig0026223:7319-7338	Msa1427810:CDS	30.0%
!!	CAAGAATTCATTGGTTTCAT+TGG	+	tig0026223:7384-7403	Msa1427800:CDS	30.0%
!	ATCCTTCATTTTACCATCAA+TGG	+	tig0026223:7477-7496	None:intergenic	30.0%
	GAATATAGCTGGAGAAAATA+TGG	-	tig0026223:7946-7965	Msa1427810:intron	30.0%
	TATGGTCAAAAGGATATTCT+TGG	-	tig0026223:7964-7983	Msa1427810:intron	30.0%
!	AGAAGACAAAGTGCTTATTA+AGG	-	tig0026223:8357-8376	Msa1427810:CDS	30.0%
	TGAAGATCCAACAATAATTG+AGG	-	tig0026223:8620-8639	Msa1427810:intron	30.0%
	ATAATTGAGGTAACTTACAG+AGG	-	tig0026223:8633-8652	Msa1427810:intron	30.0%
!	TCAAGCTAAGCCTTTAAAAA+GGG	-	tig0026223:8677-8696	Msa1427810:intron	30.0%
	TCCCTCAAAGTTAAAGATAA+AGG	-	tig0026223:8704-8723	Msa1427810:intron	30.0%
!	CCCTTTATCTTTAACTTTGA+GGG	+	tig0026223:8708-8727	None:intergenic	30.0%
	CCCTCAAAGTTAAAGATAAA+GGG	-	tig0026223:8705-8724	Msa1427810:intron	30.0%
	TTGTCAGAATATCAATGCAA+TGG	-	tig0026223:8926-8945	Msa1427810:CDS	30.0%
	TCTATCATATCTGAAGATTC+TGG	+	tig0026223:9034-9053	None:intergenic	30.0%
	GAGTGTGAAATAATAGACAG+AGG	+	tig0026223:7211-7230	Msa1427800:intron	35.0%
	TCAACATAGTAAGTGCTTTC+TGG	+	tig0026223:7430-7449	None:intergenic	35.0%
	CTTACTATGTTGAATGTGAG+AGG	-	tig0026223:7437-7456	Msa1427810:intron	35.0%
!	GACCATTGATGGTAAAATGA+AGG	-	tig0026223:7472-7491	Msa1427810:intron	35.0%
!!	TCTATGATGACCTCACTTTT+GGG	+	tig0026223:7527-7546	None:intergenic	35.0%
!!!	TTTTCTTGAAGAGAGCATTG+TGG	+	tig0026223:7562-7581	None:intergenic	35.0%
	ACAATGCTCTCTTCAAGAAA+AGG	-	tig0026223:7561-7580	Msa1427810:CDS	35.0%
	TTCATGTGTGTGAATTGTCA+AGG	-	tig0026223:7791-7810	Msa1427810:intron	35.0%
	ACTGAAATACGTTCAAGCTA+GGG	+	tig0026223:7823-7842	None:intergenic	35.0%
	TACTGAAATACGTTCAAGCT+AGG	+	tig0026223:7824-7843	None:intergenic	35.0%
	TTCACTTGTTCCTTCCATTT+AGG	+	tig0026223:7883-7902	None:intergenic	35.0%
	ACAAACACAGGATTATCTGA+AGG	-	tig0026223:7910-7929	Msa1427810:intron	35.0%
	CAAACACAGGATTATCTGAA+GGG	-	tig0026223:7911-7930	Msa1427810:intron	35.0%
	CTTTGGATGATGAATATAGC+TGG	-	tig0026223:7935-7954	Msa1427810:intron	35.0%
	CTGGAGAAAATATGGTCAAA+AGG	-	tig0026223:7954-7973	Msa1427810:intron	35.0%
!	TTCTTGGAGCTAAGTTTTCA+AGG	-	tig0026223:7980-7999	Msa1427810:intron	35.0%
	GGTTAACATGGCTAAAAACA+GGG	+	tig0026223:8173-8192	None:intergenic	35.0%
	TGGTTAACATGGCTAAAAAC+AGG	+	tig0026223:8174-8193	None:intergenic	35.0%
!!	TTTATTGGTTTGGATTGCAG+AGG	-	tig0026223:8531-8550	Msa1427810:intron	35.0%
	TACAGATGCACACATAGAAA+TGG	-	tig0026223:8558-8577	Msa1427810:intron	35.0%
!!	CTTTTTAAAGGCTTAGCTTG+AGG	+	tig0026223:8678-8697	None:intergenic	35.0%
!	CTCAAGCTAAGCCTTTAAAA+AGG	-	tig0026223:8676-8695	Msa1427810:intron	35.0%
!	GAGGGAAATTCCCTTTTTAA+AGG	+	tig0026223:8690-8709	None:intergenic	35.0%
!	GCCCTTTATCTTTAACTTTG+AGG	+	tig0026223:8709-8728	None:intergenic	35.0%
	TTTAACATCAAGTTCTGCCT+TGG	+	tig0026223:8799-8818	None:intergenic	35.0%
	TGACTTAGAAGAAACCAAAG+AGG	-	tig0026223:8824-8843	Msa1427810:CDS	35.0%
	GACTTAGAAGAAACCAAAGA+GGG	-	tig0026223:8825-8844	Msa1427810:CDS	35.0%
	TCTGATTCAATTGATGGAGA+AGG	+	tig0026223:8873-8892	None:intergenic	35.0%
!!	TGCAATGGATTATGCCAAAA+TGG	-	tig0026223:8941-8960	Msa1427810:CDS	35.0%
!!!	ATTCTGAAGTTGGTCCATTT+TGG	+	tig0026223:8958-8977	None:intergenic	35.0%
!!	GTGATATCAGATTCTGAAGT+TGG	+	tig0026223:8968-8987	None:intergenic	35.0%
	ATCTGATATCACTGATACAG+TGG	-	tig0026223:8976-8995	Msa1427810:CDS	35.0%
	TACAGTGGAATTACACCAAA+TGG	-	tig0026223:8991-9010	Msa1427810:CDS	35.0%
	ACAGTGGAATTACACCAAAT+GGG	-	tig0026223:8992-9011	Msa1427810:CDS	35.0%
	CAATTTCAGAAATCGAAGAC+TGG	-	tig0026223:9080-9099	Msa1427810:five_prime_UTR	35.0%
	GTGAAATTGTTGCAGAAGTT+GGG	+	tig0026223:9115-9134	None:intergenic	35.0%
	TGTGAAATTGTTGCAGAAGT+TGG	+	tig0026223:9116-9135	None:intergenic	35.0%
	GAGTGTGAAATAATAGACAG+AGG	+	tig0026223:7211-7230	Msa1427800:intron	35.0%
	TCAACATAGTAAGTGCTTTC+TGG	+	tig0026223:7430-7449	None:intergenic	35.0%
	CTTACTATGTTGAATGTGAG+AGG	-	tig0026223:7437-7456	Msa1427810:intron	35.0%
!	GACCATTGATGGTAAAATGA+AGG	-	tig0026223:7472-7491	Msa1427810:intron	35.0%
!!	TCTATGATGACCTCACTTTT+GGG	+	tig0026223:7527-7546	None:intergenic	35.0%
!!!	TTTTCTTGAAGAGAGCATTG+TGG	+	tig0026223:7562-7581	None:intergenic	35.0%
	ACAATGCTCTCTTCAAGAAA+AGG	-	tig0026223:7561-7580	Msa1427810:CDS	35.0%
	TTCATGTGTGTGAATTGTCA+AGG	-	tig0026223:7791-7810	Msa1427810:intron	35.0%
	ACTGAAATACGTTCAAGCTA+GGG	+	tig0026223:7823-7842	None:intergenic	35.0%
	TACTGAAATACGTTCAAGCT+AGG	+	tig0026223:7824-7843	None:intergenic	35.0%
	TTCACTTGTTCCTTCCATTT+AGG	+	tig0026223:7883-7902	None:intergenic	35.0%
	ACAAACACAGGATTATCTGA+AGG	-	tig0026223:7910-7929	Msa1427810:intron	35.0%
	CAAACACAGGATTATCTGAA+GGG	-	tig0026223:7911-7930	Msa1427810:intron	35.0%
	CTTTGGATGATGAATATAGC+TGG	-	tig0026223:7935-7954	Msa1427810:intron	35.0%
	CTGGAGAAAATATGGTCAAA+AGG	-	tig0026223:7954-7973	Msa1427810:intron	35.0%
!	TTCTTGGAGCTAAGTTTTCA+AGG	-	tig0026223:7980-7999	Msa1427810:intron	35.0%
	GGTTAACATGGCTAAAAACA+GGG	+	tig0026223:8173-8192	None:intergenic	35.0%
	TGGTTAACATGGCTAAAAAC+AGG	+	tig0026223:8174-8193	None:intergenic	35.0%
!!	TTTATTGGTTTGGATTGCAG+AGG	-	tig0026223:8531-8550	Msa1427810:intron	35.0%
	TACAGATGCACACATAGAAA+TGG	-	tig0026223:8558-8577	Msa1427810:intron	35.0%
!!	CTTTTTAAAGGCTTAGCTTG+AGG	+	tig0026223:8678-8697	None:intergenic	35.0%
!	CTCAAGCTAAGCCTTTAAAA+AGG	-	tig0026223:8676-8695	Msa1427810:intron	35.0%
!	GAGGGAAATTCCCTTTTTAA+AGG	+	tig0026223:8690-8709	None:intergenic	35.0%
!	GCCCTTTATCTTTAACTTTG+AGG	+	tig0026223:8709-8728	None:intergenic	35.0%
	TTTAACATCAAGTTCTGCCT+TGG	+	tig0026223:8799-8818	None:intergenic	35.0%
	TGACTTAGAAGAAACCAAAG+AGG	-	tig0026223:8824-8843	Msa1427810:CDS	35.0%
	GACTTAGAAGAAACCAAAGA+GGG	-	tig0026223:8825-8844	Msa1427810:CDS	35.0%
	TCTGATTCAATTGATGGAGA+AGG	+	tig0026223:8873-8892	None:intergenic	35.0%
!!	TGCAATGGATTATGCCAAAA+TGG	-	tig0026223:8941-8960	Msa1427810:CDS	35.0%
!!!	ATTCTGAAGTTGGTCCATTT+TGG	+	tig0026223:8958-8977	None:intergenic	35.0%
!!	GTGATATCAGATTCTGAAGT+TGG	+	tig0026223:8968-8987	None:intergenic	35.0%
	ATCTGATATCACTGATACAG+TGG	-	tig0026223:8976-8995	Msa1427810:CDS	35.0%
	TACAGTGGAATTACACCAAA+TGG	-	tig0026223:8991-9010	Msa1427810:CDS	35.0%
	ACAGTGGAATTACACCAAAT+GGG	-	tig0026223:8992-9011	Msa1427810:CDS	35.0%
	CAATTTCAGAAATCGAAGAC+TGG	-	tig0026223:9080-9099	Msa1427810:five_prime_UTR	35.0%
	GTGAAATTGTTGCAGAAGTT+GGG	+	tig0026223:9115-9134	None:intergenic	35.0%
	TGTGAAATTGTTGCAGAAGT+TGG	+	tig0026223:9116-9135	None:intergenic	35.0%
	TTAGTGAAAGGTGAGACGAA+GGG	+	tig0026223:7182-7201	Msa1427800:intron	40.0%
	GCACTTAAGTGGAGTAATGA+AGG	+	tig0026223:7235-7254	Msa1427800:CDS	40.0%
	AATGAAGATGGGCACTTAAG+TGG	+	tig0026223:7246-7265	Msa1427800:CDS	40.0%
!	CATAGTAAGTGCTTTCTGGT+AGG	+	tig0026223:7426-7445	None:intergenic	40.0%
	ACTATGTTGAATGTGAGAGG+AGG	-	tig0026223:7440-7459	Msa1427810:intron	40.0%
	GGACTCTCGTTTGTAAAAGA+AGG	+	tig0026223:7506-7525	None:intergenic	40.0%
!	GTCTATGATGACCTCACTTT+TGG	+	tig0026223:7528-7547	None:intergenic	40.0%
	TGTGTGAATTGTCAAGGTCA+AGG	-	tig0026223:7797-7816	Msa1427810:intron	40.0%
!	AAAGAGCATGCCTAAATGGA+AGG	-	tig0026223:7870-7889	Msa1427810:intron	40.0%
	GTGAAGATTTGCACAAACAC+AGG	-	tig0026223:7898-7917	Msa1427810:intron	40.0%
	AGGATTATCTGAAGGGTCTT+TGG	-	tig0026223:7918-7937	Msa1427810:intron	40.0%
	AGTAAGCATCTTAGTGTCAC+AGG	-	tig0026223:8131-8150	Msa1427810:intron	40.0%
	TGCACACATAGAAATGGACA+AGG	-	tig0026223:8564-8583	Msa1427810:intron	40.0%
	GCACACATAGAAATGGACAA+GGG	-	tig0026223:8565-8584	Msa1427810:intron	40.0%
!	TTTGAACCTGCTTTGTTGCT+AGG	+	tig0026223:8593-8612	None:intergenic	40.0%
	TAGCAACAAAGCAGGTTCAA+AGG	-	tig0026223:8592-8611	Msa1427810:intron	40.0%
!!	AGAGACTAGTTTCACTTCCA+AGG	-	tig0026223:8779-8798	Msa1427810:CDS	40.0%
	GAGAAGGAAAACAAAACCGA+GGG	+	tig0026223:8857-8876	None:intergenic	40.0%
	GATTCTGGTATATGCCAAGT+TGG	+	tig0026223:9019-9038	None:intergenic	40.0%
	TTAGTGAAAGGTGAGACGAA+GGG	+	tig0026223:7182-7201	Msa1427800:intron	40.0%
	GCACTTAAGTGGAGTAATGA+AGG	+	tig0026223:7235-7254	Msa1427800:CDS	40.0%
	AATGAAGATGGGCACTTAAG+TGG	+	tig0026223:7246-7265	Msa1427800:CDS	40.0%
!	CATAGTAAGTGCTTTCTGGT+AGG	+	tig0026223:7426-7445	None:intergenic	40.0%
	ACTATGTTGAATGTGAGAGG+AGG	-	tig0026223:7440-7459	Msa1427810:intron	40.0%
	GGACTCTCGTTTGTAAAAGA+AGG	+	tig0026223:7506-7525	None:intergenic	40.0%
!	GTCTATGATGACCTCACTTT+TGG	+	tig0026223:7528-7547	None:intergenic	40.0%
	TGTGTGAATTGTCAAGGTCA+AGG	-	tig0026223:7797-7816	Msa1427810:intron	40.0%
!	AAAGAGCATGCCTAAATGGA+AGG	-	tig0026223:7870-7889	Msa1427810:intron	40.0%
	GTGAAGATTTGCACAAACAC+AGG	-	tig0026223:7898-7917	Msa1427810:intron	40.0%
	AGGATTATCTGAAGGGTCTT+TGG	-	tig0026223:7918-7937	Msa1427810:intron	40.0%
	AGTAAGCATCTTAGTGTCAC+AGG	-	tig0026223:8131-8150	Msa1427810:intron	40.0%
	TGCACACATAGAAATGGACA+AGG	-	tig0026223:8564-8583	Msa1427810:intron	40.0%
	GCACACATAGAAATGGACAA+GGG	-	tig0026223:8565-8584	Msa1427810:intron	40.0%
!	TTTGAACCTGCTTTGTTGCT+AGG	+	tig0026223:8593-8612	None:intergenic	40.0%
	TAGCAACAAAGCAGGTTCAA+AGG	-	tig0026223:8592-8611	Msa1427810:intron	40.0%
!!	AGAGACTAGTTTCACTTCCA+AGG	-	tig0026223:8779-8798	Msa1427810:CDS	40.0%
	GAGAAGGAAAACAAAACCGA+GGG	+	tig0026223:8857-8876	None:intergenic	40.0%
	GATTCTGGTATATGCCAAGT+TGG	+	tig0026223:9019-9038	None:intergenic	40.0%
	TAGTGAAAGGTGAGACGAAG+GGG	+	tig0026223:7181-7200	Msa1427800:intron	45.0%
	CTTAGTGAAAGGTGAGACGA+AGG	+	tig0026223:7183-7202	Msa1427800:intron	45.0%
	CAGAGGAGTTGCTTAGTGAA+AGG	+	tig0026223:7194-7213	Msa1427800:intron	45.0%
	GCTTTGCTAACTCCTTTCCT+TGG	+	tig0026223:7334-7353	Msa1427800:CDS	45.0%
	GGAGAGACTAAGACCATTGA+TGG	-	tig0026223:7461-7480	Msa1427810:intron	45.0%
	AAACGAGAGTCCCAAAAGTG+AGG	-	tig0026223:7514-7533	Msa1427810:CDS	45.0%
	AAGTGAGGTCATCATAGACC+AGG	-	tig0026223:7529-7548	Msa1427810:CDS	45.0%
!	GAGCATTGTGGTTAAACTCC+TGG	+	tig0026223:7550-7569	None:intergenic	45.0%
!	GCAGAAAGAGCATGCCTAAA+TGG	-	tig0026223:7866-7885	Msa1427810:intron	45.0%
!!!	CCAAAGAGGGTATTTTCCCT+CGG	-	tig0026223:8838-8857	Msa1427810:CDS	45.0%
	GGAGAAGGAAAACAAAACCG+AGG	+	tig0026223:8858-8877	None:intergenic	45.0%
	TACACCAAATGGGTCCAACT+TGG	-	tig0026223:9002-9021	Msa1427810:CDS	45.0%
!	TATGCCAAGTTGGACCCATT+TGG	+	tig0026223:9009-9028	None:intergenic	45.0%
	TAGTGAAAGGTGAGACGAAG+GGG	+	tig0026223:7181-7200	Msa1427800:intron	45.0%
	CTTAGTGAAAGGTGAGACGA+AGG	+	tig0026223:7183-7202	Msa1427800:intron	45.0%
	CAGAGGAGTTGCTTAGTGAA+AGG	+	tig0026223:7194-7213	Msa1427800:intron	45.0%
	GCTTTGCTAACTCCTTTCCT+TGG	+	tig0026223:7334-7353	Msa1427800:CDS	45.0%
	GGAGAGACTAAGACCATTGA+TGG	-	tig0026223:7461-7480	Msa1427810:intron	45.0%
	AAACGAGAGTCCCAAAAGTG+AGG	-	tig0026223:7514-7533	Msa1427810:CDS	45.0%
	AAGTGAGGTCATCATAGACC+AGG	-	tig0026223:7529-7548	Msa1427810:CDS	45.0%
!	GAGCATTGTGGTTAAACTCC+TGG	+	tig0026223:7550-7569	None:intergenic	45.0%
!	GCAGAAAGAGCATGCCTAAA+TGG	-	tig0026223:7866-7885	Msa1427810:intron	45.0%
!!!	CCAAAGAGGGTATTTTCCCT+CGG	-	tig0026223:8838-8857	Msa1427810:CDS	45.0%
	GGAGAAGGAAAACAAAACCG+AGG	+	tig0026223:8858-8877	None:intergenic	45.0%
	TACACCAAATGGGTCCAACT+TGG	-	tig0026223:9002-9021	Msa1427810:CDS	45.0%
!	TATGCCAAGTTGGACCCATT+TGG	+	tig0026223:9009-9028	None:intergenic	45.0%
	CCGAGGGAAAATACCCTCTT+TGG	+	tig0026223:8841-8860	None:intergenic	50.0%
	CCGAGGGAAAATACCCTCTT+TGG	+	tig0026223:8841-8860	None:intergenic	50.0%
!	AGGGTGCCTAGCAACAAAGC+AGG	-	tig0026223:8584-8603	Msa1427810:intron	55.0%
!	AGGGTGCCTAGCAACAAAGC+AGG	-	tig0026223:8584-8603	Msa1427810:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
tig0026223	gene	7177	9177	7177	ID=Msa1427810;Name=Msa1427810
tig0026223	mRNA	7177	9177	7177	ID=Msa1427810-mRNA-1;Parent=Msa1427810;Name=Msa1427810-mRNA-1;_AED=0.30;_eAED=0.30;_QI=104\|0.66\|0.5\|1\|1\|1\|4\|0\|324
tig0026223	exon	7177	7421	7177	ID=Msa1427810-mRNA-1:exon:5654;Parent=Msa1427810-mRNA-1
tig0026223	exon	7508	7803	7508	ID=Msa1427810-mRNA-1:exon:5653;Parent=Msa1427810-mRNA-1
tig0026223	exon	8353	8484	8353	ID=Msa1427810-mRNA-1:exon:5652;Parent=Msa1427810-mRNA-1
tig0026223	exon	8772	9177	8772	ID=Msa1427810-mRNA-1:exon:5651;Parent=Msa1427810-mRNA-1
tig0026223	five_prime_UTR	9074	9177	9074	ID=Msa1427810-mRNA-1:five_prime_utr;Parent=Msa1427810-mRNA-1
tig0026223	CDS	8772	9073	8772	ID=Msa1427810-mRNA-1:cds;Parent=Msa1427810-mRNA-1
tig0026223	CDS	8353	8484	8353	ID=Msa1427810-mRNA-1:cds;Parent=Msa1427810-mRNA-1
tig0026223	CDS	7508	7803	7508	ID=Msa1427810-mRNA-1:cds;Parent=Msa1427810-mRNA-1
tig0026223	CDS	7177	7421	7177	ID=Msa1427810-mRNA-1:cds;Parent=Msa1427810-mRNA-1

Gene Sequence

>Msa1427810

ATGGAAGAGACTACAAAGAGAAAACGTGTTAGTATAACCAATGAATTAATCCAAGGAAAGGAGTTAGCAAAGCAGCTAAGTAACCATATAATTATATCATCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCAACCTACCAGAAAGCACTTACTATGTTGAATGTGAGAGGAGGAGAGACTAAGACCATTGATGGTAAAATGAAGGATTCTCATCCTTCTTTTACAAACGAGAGTCCCAAAAGTGAGGTCATCATAGACCAGGAGTTTAACCACAATGCTCTCTTCAAGAAAAGAAAGAGCATGCCTAAATGGAAGGAACAAGTGAAGATTTGCACAAACACAGGATTATCTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAGAGGATATTACAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAGGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTAACTTACAGAGGAAGACACACATGCACTCATCCTCAAGCTAAGCCTTTAAAAAGGGAATTTCCCTCAAAGTTAAAGATAAAGGGCTTAGAGAAAAATAAACTTCACAATGATAAAAAGAATCAACTACAAACTCAAGAGACTAGTTTCACTTCCAAGGCAGAACTTGATGTTAAAAGAAATGACTTAGAAGAAACCAAAGAGGAATATCAATGCAATGGATTATGCCAAAATGGACCAACTTCAGAATCTGATATCACTGATACAGTGGAATTACACCAAATGGGTCCAACTTGGCATATACCAGAATCTTCAGATATGATAGATACACATGATTGCATCTTTTCACATGCAATTTCAGAAATCGAAGACTGGATCTTAGCTCCCAACTTCTGCAACAATTTCACAATTCTAGATAATGAAATGGATCACATTGACACTGTATTGTAA

Protein sequence

>Msa1427810

MEETTKRKRVSITNELIQGKELAKQLSNHIIISSNETNEFLIDKIISTYQKALTMLNVRGGETKTIDGKMKDSHPSFTNESPKSEVIIDQEFNHNALFKKRKSMPKWKEQVKICTNTGLSEGSLDDEYSWRKYGQKDILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHPQAKPLKREFPSKLKIKGLEKNKLHNDKKNQLQTQETSFTSKAELDVKRNDLEETKEEYQCNGLCQNGPTSESDITDTVELHQMGPTWHIPESSDMIDTHDCIFSHAISEIEDWILAPNFCNNFTILDNEMDHIDTVL*