AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0311070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311070 MtrunA17_Chr2g0279901 96.603 677 22 1 1 677 1 676 0.0 1328
Msa0311070 MtrunA17_Chr4g0049501 88.559 673 76 1 6 677 3 675 0.0 1199
Msa0311070 MtrunA17_Chr2g0277021 54.134 641 285 4 31 664 46 684 0.0 688
Msa0311070 MtrunA17_Chr7g0262821 50.000 634 287 11 57 668 10 635 0.0 588
Msa0311070 MtrunA17_Chr4g0031321 51.667 600 261 10 57 634 10 602 0.0 583
Msa0311070 MtrunA17_Chr4g0031301 51.667 600 261 10 57 634 10 602 0.0 582
Msa0311070 MtrunA17_Chr7g0223181 51.500 600 262 10 57 634 10 602 0.0 580
Msa0311070 MtrunA17_Chr8g0388671 52.730 586 251 11 56 623 38 615 0.0 577
Msa0311070 MtrunA17_Chr7g0223291 50.400 625 276 13 57 656 10 625 0.0 575
Msa0311070 MtrunA17_Chr8g0388761 52.389 586 253 10 56 623 38 615 0.0 575
Msa0311070 MtrunA17_Chr4g0073741 51.092 595 261 10 57 630 9 594 0.0 568
Msa0311070 MtrunA17_Chr2g0284681 46.897 580 274 12 57 615 9 575 6.94e-168 494
Msa0311070 MtrunA17_Chr7g0223721 46.712 593 292 12 49 623 2 588 4.06e-164 485
Msa0311070 MtrunA17_Chr7g0233311 47.849 558 266 10 57 596 10 560 5.31e-164 484
Msa0311070 MtrunA17_Chr7g0223781 45.017 602 299 11 57 632 10 605 5.05e-162 479
Msa0311070 MtrunA17_Chr7g0223711 45.907 562 274 10 57 598 10 561 7.59e-162 479
Msa0311070 MtrunA17_Chr7g0221661 45.608 592 298 12 57 630 10 595 1.04e-161 479
Msa0311070 MtrunA17_Chr7g0223751 46.416 558 276 11 57 598 10 560 2.00e-161 478
Msa0311070 MtrunA17_Chr2g0298851 44.915 590 297 13 57 626 10 591 6.96e-160 474
Msa0311070 MtrunA17_Chr7g0223621 44.874 595 295 14 57 629 10 593 5.66e-159 471
Msa0311070 MtrunA17_Chr8g0350731 45.455 594 298 13 24 598 2 588 2.55e-158 471
Msa0311070 MtrunA17_Chr4g0040931 45.946 592 288 15 57 626 10 591 1.81e-157 468
Msa0311070 MtrunA17_Chr6g0462601 43.836 584 305 11 57 623 10 587 3.02e-157 468
Msa0311070 MtrunA17_Chr7g0223851 44.137 614 311 15 57 648 19 622 8.11e-157 466
Msa0311070 MtrunA17_Chr5g0427901 43.178 623 314 14 57 648 10 623 1.95e-155 463
Msa0311070 MtrunA17_Chr7g0223741 45.357 560 280 11 57 598 10 561 3.28e-155 461
Msa0311070 MtrunA17_Chr2g0298861 44.983 598 293 14 49 616 2 593 7.65e-155 461
Msa0311070 MtrunA17_Chr2g0293581 44.634 587 298 11 57 623 11 590 2.43e-154 460
Msa0311070 MtrunA17_Chr7g0223731 44.803 558 285 11 57 598 10 560 1.61e-152 455
Msa0311070 MtrunA17_Chr7g0223801 43.993 591 307 13 57 630 10 593 2.88e-152 454
Msa0311070 MtrunA17_Chr7g0225671 45.238 588 292 15 55 623 15 591 1.13e-151 453
Msa0311070 MtrunA17_Chr2g0287631 44.590 610 288 11 57 623 10 612 1.93e-151 452
Msa0311070 MtrunA17_Chr7g0248131 45.455 561 280 14 57 598 10 563 4.07e-150 449
Msa0311070 MtrunA17_Chr6g0462681 44.165 557 290 9 57 598 10 560 4.09e-150 451
Msa0311070 MtrunA17_Chr7g0223031 44.624 558 286 11 57 598 10 560 4.98e-150 449
Msa0311070 MtrunA17_Chr7g0223701 44.444 567 283 13 57 598 10 569 6.94e-150 449
Msa0311070 MtrunA17_Chr7g0223631 43.784 555 281 12 57 598 10 546 3.18e-148 443
Msa0311070 MtrunA17_Chr2g0296391 44.802 529 267 9 57 567 10 531 1.55e-147 439
Msa0311070 MtrunA17_Chr7g0233301 44.563 561 253 12 57 598 10 531 2.56e-144 433
Msa0311070 MtrunA17_Chr6g0462641 41.815 562 301 9 57 598 10 565 1.07e-142 432
Msa0311070 MtrunA17_Chr6g0462711 41.541 597 318 12 57 629 11 600 1.82e-142 431
Msa0311070 MtrunA17_Chr7g0248151 44.365 559 287 12 57 598 10 561 3.01e-142 429
Msa0311070 MtrunA17_Chr6g0462771 41.815 562 301 9 57 598 10 565 6.29e-142 429
Msa0311070 MtrunA17_Chr7g0223821 48.190 525 237 15 43 547 1 510 8.91e-142 431
Msa0311070 MtrunA17_Chr7g0217971 42.275 589 297 13 57 630 10 570 1.14e-141 426
Msa0311070 MtrunA17_Chr4g0012541 40.554 614 324 15 57 648 10 604 8.94e-139 419
Msa0311070 MtrunA17_Chr7g0223541 44.332 494 256 9 119 598 30 518 1.50e-132 402
Msa0311070 MtrunA17_Chr6g0462611 43.539 503 266 8 109 598 11 508 2.11e-131 401
Msa0311070 MtrunA17_Chr2g0293601 43.811 509 232 8 57 550 10 479 3.93e-131 395
Msa0311070 MtrunA17_Chr7g0223831 42.959 561 264 16 57 598 10 533 4.98e-131 399
Msa0311070 MtrunA17_Chr7g0228281 39.409 609 302 13 57 648 71 629 3.76e-129 395
Msa0311070 MtrunA17_Chr7g0215261 42.857 560 260 15 57 598 10 527 6.81e-129 393
Msa0311070 MtrunA17_Chr8g0390821 38.138 666 320 20 53 648 7 650 1.33e-125 387
Msa0311070 MtrunA17_Chr7g0223681 45.223 471 238 8 140 596 5 469 2.40e-125 382
Msa0311070 MtrunA17_Chr2g0331381 39.963 543 240 13 56 581 6 479 5.40e-119 364
Msa0311070 MtrunA17_Chr6g0462861 37.222 540 304 12 54 580 7 524 6.48e-106 335
Msa0311070 MtrunA17_Chr2g0293561 45.312 384 189 7 57 426 10 386 1.59e-105 326
Msa0311070 MtrunA17_Chr2g0299791 47.656 384 184 7 57 430 1043 1419 1.28e-104 347
Msa0311070 MtrunA17_Chr2g0299921 48.092 393 187 6 46 428 1019 1404 2.07e-104 349
Msa0311070 MtrunA17_Chr2g0299921 47.222 396 189 8 57 439 1414 1802 1.36e-94 321
Msa0311070 MtrunA17_Chr2g0299851 47.368 380 187 5 57 428 1039 1413 1.69e-102 341
Msa0311070 MtrunA17_Chr2g0299821 45.932 381 185 7 57 423 10 383 3.71e-100 315
Msa0311070 MtrunA17_Chr2g0299821 50.562 89 36 1 496 576 396 484 2.07e-19 92.0
Msa0311070 MtrunA17_Chr2g0299881 45.995 387 192 8 56 430 1038 1419 6.81e-97 326
Msa0311070 MtrunA17_Chr1g0151991 52.364 275 119 6 57 320 10 283 4.04e-86 272
Msa0311070 MtrunA17_Chr1g0166551 34.116 554 239 15 55 596 4 443 1.35e-80 265
Msa0311070 MtrunA17_Chr7g0245521 50.379 264 119 4 57 309 10 272 3.04e-79 253
Msa0311070 MtrunA17_Chr2g0293271 37.296 429 185 9 77 494 54 409 1.82e-73 243
Msa0311070 MtrunA17_Chr5g0394391 30.784 523 300 11 49 532 22 521 5.61e-69 235
Msa0311070 MtrunA17_Chr3g0098761 34.483 406 249 6 56 449 3 403 2.86e-68 238
Msa0311070 MtrunA17_Chr7g0245531 46.094 256 132 4 346 596 2 256 3.87e-67 223
Msa0311070 MtrunA17_Chr4g0004331 34.069 408 252 5 56 451 3 405 4.19e-67 236
Msa0311070 MtrunA17_Chr2g0331901 32.673 404 255 5 56 447 3 401 7.62e-64 227
Msa0311070 MtrunA17_Chr5g0444001 30.114 528 309 11 56 544 3 509 4.12e-63 219
Msa0311070 MtrunA17_Chr7g0223671 52.356 191 82 3 118 299 6 196 4.45e-59 197
Msa0311070 MtrunA17_Chr1g0188601 52.128 188 81 3 138 316 1 188 1.93e-55 187
Msa0311070 MtrunA17_Chr1g0152001 39.286 280 156 8 354 626 3 275 2.75e-52 183
Msa0311070 MtrunA17_Chr4g0060241 30.492 528 293 16 48 534 12 506 5.02e-52 189
Msa0311070 MtrunA17_Chr6g0462631 38.614 303 132 6 160 453 40 297 1.85e-51 180
Msa0311070 MtrunA17_Chr6g0462791 53.333 165 73 1 160 320 11 175 2.61e-51 176
Msa0311070 MtrunA17_Chr6g0462751 34.561 353 160 11 110 449 9 303 7.60e-50 176
Msa0311070 MtrunA17_Chr7g0223761 35.474 327 154 6 278 596 3 280 1.21e-49 177
Msa0311070 MtrunA17_Chr4g0064621 30.524 534 314 13 51 543 135 652 1.39e-47 178
Msa0311070 MtrunA17_Chr4g0046881 57.037 135 53 1 177 306 14 148 5.87e-45 157
Msa0311070 MtrunA17_Chr1g0188611 43.548 248 123 7 368 603 6 248 1.91e-44 160
Msa0311070 MtrunA17_Chr7g0223771 55.333 150 58 3 142 282 4 153 4.47e-44 155
Msa0311070 MtrunA17_Chr3g0120101 28.329 413 265 9 47 433 17 424 4.00e-41 161
Msa0311070 MtrunA17_Chr5g0442171 31.157 337 193 9 212 526 1 320 2.49e-40 150
Msa0311070 MtrunA17_Chr7g0223861 50.382 131 56 3 124 245 4 134 1.13e-33 125
Msa0311070 MtrunA17_Chr6g0462691 46.377 138 69 2 367 499 5 142 8.31e-33 124
Msa0311070 MtrunA17_Chr7g0245541 46.809 141 73 2 457 596 4 143 2.38e-32 124
Msa0311070 MtrunA17_Chr5g0394221 30.544 239 161 5 342 576 71 308 9.42e-32 127
Msa0311070 MtrunA17_Chr6g0462701 42.484 153 59 3 160 307 40 168 2.64e-29 114
Msa0311070 MtrunA17_Chr4g0046871 50.515 97 44 2 380 472 9 105 9.86e-24 96.3
Msa0311070 MtrunA17_Chr4g0064651 44.565 92 51 0 435 526 30 121 2.46e-19 84.3
Msa0311070 MtrunA17_Chr5g0394231 29.817 218 95 6 121 329 6 174 3.34e-19 85.9
Msa0311070 MtrunA17_Chr2g0284661 53.571 84 35 2 407 486 60 143 5.39e-19 84.0
Msa0311070 MtrunA17_Chr6g0481381 52.703 74 30 1 218 286 1 74 7.87e-17 79.3
Msa0311070 MtrunA17_Chr6g0481391 32.520 123 75 2 83 201 13 131 2.69e-16 75.9
Msa0311070 MtrunA17_Chr7g0223691 57.576 66 25 2 57 120 10 74 1.26e-13 66.6
Msa0311070 MtrunA17_Chr1g0188591 50.000 66 30 2 57 120 10 74 1.56e-12 63.9
Msa0311070 MtrunA17_Chr6g0462621 48.438 64 32 1 57 120 10 72 1.61e-12 63.2
Msa0311070 MtrunA17_Chr2g0299941 52.113 71 31 1 423 490 7 77 1.61e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311070 AT5G09590.1 83.994 681 103 2 3 677 2 682 0.0 1168
Msa0311070 AT4G37910.1 81.065 676 123 2 3 674 2 676 0.0 1092
Msa0311070 AT4G37910.2 81.065 676 123 2 3 674 2 676 0.0 1092
Msa0311070 AT4G24280.1 57.309 602 252 3 50 648 74 673 0.0 684
Msa0311070 AT5G49910.1 55.259 637 262 5 50 665 74 708 0.0 684
Msa0311070 AT5G02500.1 51.839 598 263 11 57 634 10 602 0.0 585
Msa0311070 AT5G02490.1 51.505 598 265 10 57 634 10 602 0.0 582
Msa0311070 AT5G42020.1 50.319 626 282 12 56 660 37 654 0.0 580
Msa0311070 AT5G42020.3 50.319 626 282 12 56 660 42 659 0.0 580
Msa0311070 AT1G56410.1 50.894 615 275 11 57 651 10 617 0.0 580
Msa0311070 AT3G12580.1 49.762 631 286 11 57 665 10 631 0.0 580
Msa0311070 AT5G28540.1 51.236 607 269 12 56 644 37 634 0.0 576
Msa0311070 AT3G09440.1 52.076 578 251 9 57 615 10 580 0.0 573
Msa0311070 AT3G09440.4 52.076 578 251 9 57 615 10 580 0.0 573
Msa0311070 AT3G09440.2 52.076 578 251 9 57 615 10 580 0.0 573
Msa0311070 AT3G09440.3 52.076 578 251 9 57 615 10 580 0.0 573
Msa0311070 AT1G16030.1 47.678 646 299 12 57 671 9 646 0.0 558
Msa0311070 AT1G09080.2 52.641 568 248 9 56 610 42 601 0.0 545
Msa0311070 AT1G09080.1 52.641 568 248 9 56 610 52 611 0.0 545
Msa0311070 AT5G42020.2 55.967 486 191 10 56 526 37 514 5.83e-176 515
Msa0311070 AT5G02500.2 51.407 391 175 7 57 437 10 395 1.32e-126 385
Msa0311070 AT1G79920.1 33.252 409 256 5 56 452 3 406 1.22e-67 236
Msa0311070 AT1G79920.3 33.252 409 256 5 56 452 3 406 1.80e-67 235
Msa0311070 AT1G79920.2 33.252 409 256 5 56 452 3 406 1.80e-67 235
Msa0311070 AT1G79920.4 33.252 409 256 5 56 452 3 406 1.80e-67 235
Msa0311070 AT1G79930.2 32.763 409 258 5 56 452 3 406 1.06e-65 231
Msa0311070 AT2G32120.1 31.660 518 298 14 48 534 21 513 1.19e-65 226
Msa0311070 AT2G32120.2 31.660 518 298 14 48 534 21 513 1.19e-65 226
Msa0311070 AT1G79930.1 32.763 409 258 5 56 452 3 406 1.52e-65 232
Msa0311070 AT1G11660.4 26.837 667 404 15 56 651 3 656 6.66e-63 223
Msa0311070 AT1G11660.3 26.837 667 404 15 56 651 3 656 6.66e-63 223
Msa0311070 AT1G11660.1 26.837 667 404 15 56 651 3 656 6.66e-63 223
Msa0311070 AT1G11660.2 26.582 632 380 15 91 651 1 619 4.77e-55 201
Msa0311070 AT4G16660.1 27.133 457 293 11 51 472 21 472 1.10e-40 160
Msa0311070 AT4G16660.2 27.133 457 293 11 51 472 45 496 1.32e-40 160
Msa0311070 AT4G32208.1 68.468 111 33 1 569 677 43 153 5.54e-37 135
Msa0311070 AT5G09600.3 39.796 98 44 2 3 96 2 88 2.66e-15 75.9
Msa0311070 AT5G09600.1 39.796 98 44 2 3 96 2 88 2.66e-15 75.9
Msa0311070 AT4G32210.1 39.796 98 44 2 3 96 2 88 2.66e-15 75.9

Find 212 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATCAGACTCTTTCTTTCT+TGG 0.190361 2_4:-5938446 None:intergenic
ACCATTAGAAATTTCTAAAA+TGG 0.193947 2_4:-5936638 None:intergenic
TTCTGCAGTTTCCTTCATTT+TGG 0.221735 2_4:-5936398 None:intergenic
ATTAACTAGAGCCTCAAATT+TGG 0.226202 2_4:-5937021 None:intergenic
GCTGGCTGATCCTGTTTCTT+TGG 0.234971 2_4:+5934559 Msa0311070:five_prime_UTR
TCAGAATTCTCGATGACTTT+TGG 0.243473 2_4:-5936106 None:intergenic
GGATGTTACACCACTCTCTT+TGG 0.249560 2_4:+5937289 Msa0311070:CDS
GAAACCACCTCCTGGACTTT+TGG 0.260284 2_4:-5937152 None:intergenic
GATGTTATTGGTATTGATTT+AGG 0.271435 2_4:+5935948 Msa0311070:CDS
TGTCGTATCGTGTCATTATA+TGG 0.304691 2_4:-5934506 None:intergenic
TAATTCATGTGTTTCTGTTA+TGG 0.305065 2_4:+5935977 Msa0311070:CDS
CTCTTTGGGTATTGAGACTT+TGG 0.311216 2_4:+5937304 Msa0311070:CDS
TCAACAGTTCTTTAAATAAC+AGG 0.314850 2_4:+5938800 Msa0311070:three_prime_UTR
GAGCATGCAACTCGGCTTCT+TGG 0.317503 2_4:-5938416 None:intergenic
TTTAGTTTAGTAGAAATATA+AGG 0.319125 2_4:+5938842 Msa0311070:three_prime_UTR
TCTTTGACTGTATCTTATGT+TGG 0.325559 2_4:+5939149 Msa0311070:three_prime_UTR
CAAGTTTGTCTCGACCATTC+AGG 0.327999 2_4:+5935828 Msa0311070:CDS
AAAGATGCTGGTAGAATTGC+AGG 0.328628 2_4:+5936499 Msa0311070:CDS
ACTGCTGCTGCACTTTCATA+TGG 0.336051 2_4:+5936553 Msa0311070:CDS
AACAAACGGTGACACTTTCT+TGG 0.336793 2_4:+5936773 Msa0311070:CDS
CTTCTTCTTGCCAAAGAAAC+AGG 0.337191 2_4:-5934569 None:intergenic
CTATATATGAGGGTTTAGTT+AGG 0.342365 2_4:-5934628 None:intergenic
TTCCTTCTCCGCCTATCGTT+CGG 0.349225 2_4:+5934797 Msa0311070:CDS
CTTGGAGAATTTGAGCTTGT+TGG 0.355478 2_4:+5938228 Msa0311070:CDS
AATGTGCAAAATAAAATAAA+TGG 0.358161 2_4:-5938984 None:intergenic
TATATGGATCTTTCATCAAT+TGG 0.361445 2_4:-5934490 None:intergenic
ACCTCTTCATATTCTGCCTC+TGG 0.365485 2_4:-5938732 None:intergenic
CTTTGACTGTATCTTATGTT+GGG 0.365493 2_4:+5939150 Msa0311070:three_prime_UTR
CCTGCTGGAAATGATGTTAT+TGG 0.368167 2_4:+5935936 Msa0311070:CDS
GCACCAGAGATAGTGTTTAC+TGG 0.372090 2_4:-5936220 None:intergenic
TATCCTCCAATTGTGATGAT+TGG 0.377696 2_4:+5938958 Msa0311070:three_prime_UTR
GACTGTATCTTATGTTGGGT+TGG 0.384292 2_4:+5939154 Msa0311070:three_prime_UTR
GGAGCCTTAACTATCTTGTA+TGG 0.386249 2_4:-5936304 None:intergenic
TTCATCACTGCTGATGCATC+TGG 0.388351 2_4:+5936966 Msa0311070:CDS
CCCATTGCAACTGCCTCGTC+AGG 0.392371 2_4:-5937212 None:intergenic
GATGTTACACCACTCTCTTT+GGG 0.394078 2_4:+5937290 Msa0311070:CDS
TTTGCCAGTGGACTTGTCCT+TGG 0.394178 2_4:-5938331 None:intergenic
CCCTCATCTGGTGGTTCTCA+AGG 0.394266 2_4:+5938696 Msa0311070:CDS
TGCAATGGGAGCAGCACTCC+AGG 0.396933 2_4:+5937226 Msa0311070:CDS
CATATTCTGCCTCTGGAGCC+TGG 0.397768 2_4:-5938725 None:intergenic
ATTGACGAAGTTCTTCTTGT+TGG 0.398755 2_4:+5937113 Msa0311070:CDS
TGACATGTGCTCTCCAATCT+TGG 0.405711 2_4:-5938655 None:intergenic
TCAACCCATGCATCTCCATT+TGG 0.408724 2_4:-5936325 None:intergenic
TCTAGTAGTGGTCCCTCATC+TGG 0.410197 2_4:+5938684 Msa0311070:CDS
GATGCATGGGTTGAAGCTAA+TGG 0.412898 2_4:+5936334 Msa0311070:CDS
CAAATTACTATTAAGTCATC+TGG 0.413673 2_4:+5938360 Msa0311070:CDS
CAGAAAGGGGAGCTGCTTGT+AGG 0.414196 2_4:+5936166 Msa0311070:CDS
AACAAGGCCGTCTCCAAGAT+TGG 0.416194 2_4:+5938642 Msa0311070:CDS
TTTGCACATTAACAAATGAA+TGG 0.416767 2_4:+5938997 Msa0311070:three_prime_UTR
TGGTTCTCAAGGTGGGGACC+AGG 0.421379 2_4:+5938707 Msa0311070:CDS
TATATATGAGGGTTTAGTTA+GGG 0.427224 2_4:-5934627 None:intergenic
AAAGAGAGAACTACAATAGT+AGG 0.428866 2_4:-5939131 None:intergenic
GGACTTCGACAATGCCTTGT+TGG 0.429600 2_4:+5936803 Msa0311070:CDS
CATCTGGTGGTTCTCAAGGT+GGG 0.431284 2_4:+5938700 Msa0311070:CDS
ACTGTATCTTATGTTGGGTT+GGG 0.431491 2_4:+5939155 Msa0311070:three_prime_UTR
TCTTTGGGTATTGAGACTTT+GGG 0.432640 2_4:+5937305 Msa0311070:CDS
TTGCTACTAGAGGGTAATAC+TGG 0.435103 2_4:+5939041 Msa0311070:three_prime_UTR
GAAACTGCAGAAGCTTATCT+TGG 0.436148 2_4:+5936409 Msa0311070:CDS
TGATAGAAAGAGAGAGAGAA+GGG 0.437584 2_4:-5934655 None:intergenic
AGAAAAGCCTAAGTGAATAC+AGG 0.439138 2_4:+5938508 Msa0311070:CDS
TGGTTGCCTTCTCTCAGAAA+GGG 0.442402 2_4:+5936152 Msa0311070:CDS
CACCAGAGATAGTGTTTACT+GGG 0.445183 2_4:-5936219 None:intergenic
CTTGATTGGTAGGCGATTTG+AGG 0.446705 2_4:+5936249 Msa0311070:CDS
CTTTGGGTGGTATCTTTACA+AGG 0.447010 2_4:+5937321 Msa0311070:CDS
TGATGATGATATTCAAAAGA+TGG 0.452234 2_4:+5938392 Msa0311070:CDS
TCTGGTGCCAAGCGCTTGAT+TGG 0.452993 2_4:+5936235 Msa0311070:CDS
ATGCATGGGTTGAAGCTAAT+GGG 0.454653 2_4:+5936335 Msa0311070:CDS
TGGTAACCAATCATCACAAT+TGG 0.457036 2_4:-5938964 None:intergenic
GTTACAAGGTGAGCGGGAAA+TGG 0.461798 2_4:+5938188 Msa0311070:CDS
TAACTTGATCGAACGAACTA+AGG 0.462881 2_4:+5937043 Msa0311070:CDS
AGAAGCGCACTAGAATAATC+TGG 0.463431 2_4:+5934587 Msa0311070:five_prime_UTR
TTTGGCAAGTCTCCTTGTAA+AGG 0.465703 2_4:+5937182 Msa0311070:CDS
CTGGTAAGAGTAATGAAGAA+AGG 0.466055 2_4:+5939060 Msa0311070:three_prime_UTR
TGTCAAAGAGCTCCTACTCT+TGG 0.466602 2_4:+5937268 Msa0311070:CDS
CTCAATCTGAGGCATACCTC+TGG 0.468854 2_4:-5938265 None:intergenic
TGAGCATCATTGAAATAAGC+TGG 0.470119 2_4:-5936463 None:intergenic
AAATTGACGAAACCACCTCC+TGG 0.475624 2_4:-5937160 None:intergenic
AACCCAGTAAACACTATCTC+TGG 0.477225 2_4:+5936217 Msa0311070:CDS
CTGCACATGTAGGTCACAAT+TGG 0.478779 2_4:+5935804 Msa0311070:CDS
TGTTACAAATGTTACCTGAA+TGG 0.478863 2_4:-5935842 None:intergenic
ATCTGGTGGTTCTCAAGGTG+GGG 0.483027 2_4:+5938701 Msa0311070:CDS
CAAAAGAAGATTCTAGATCA+TGG 0.484679 2_4:-5934537 None:intergenic
GACTCGTGTGCCAAAAGTCC+AGG 0.485324 2_4:+5937142 Msa0311070:CDS
ATTTCCTTAGCCACTTCGGC+AGG 0.485366 2_4:-5938540 None:intergenic
GACGAAGTTCTTCTTGTTGG+AGG 0.486215 2_4:+5937116 Msa0311070:CDS
TCCTGACGAGGCAGTTGCAA+TGG 0.487005 2_4:+5937211 Msa0311070:CDS
AGGCACACCAGCCAAGCGTC+AGG 0.487979 2_4:+5936186 Msa0311070:CDS
GTTACAGCCTGACGCTTGGC+TGG 0.490075 2_4:-5936193 None:intergenic
CTCGATTTCCTTAGCCACTT+CGG 0.491099 2_4:-5938544 None:intergenic
TGGTAAGAGTAATGAAGAAA+GGG 0.492979 2_4:+5939061 Msa0311070:three_prime_UTR
AAGATAGTTAAGGCTCCAAA+TGG 0.493974 2_4:+5936310 Msa0311070:CDS
ATTAACTAGATCCAAATTTG+AGG 0.495332 2_4:+5937010 Msa0311070:CDS
GACTCCTAGTGGTTTCTAGC+TGG 0.495520 2_4:+5938765 Msa0311070:three_prime_UTR
GTGATAGAAAGAGAGAGAGA+AGG 0.499015 2_4:-5934656 None:intergenic
AGAGCGGAGCAAGGCAGTAG+CGG 0.499313 2_4:-5934748 None:intergenic
AAGAACTTCGTCAATGTCCT+TGG 0.502218 2_4:-5937105 None:intergenic
CTGCTGCTGCACTTTCATAT+GGG 0.503676 2_4:+5936554 Msa0311070:CDS
TCATCTGGTGGTTCTCAAGG+TGG 0.506147 2_4:+5938699 Msa0311070:CDS
GTGGTTGCCTTCTCTCAGAA+AGG 0.507218 2_4:+5936151 Msa0311070:CDS
TCTTCTCCCTGTATTCACTT+AGG 0.507892 2_4:-5938515 None:intergenic
ACAAACGGTGACACTTTCTT+GGG 0.511382 2_4:+5936774 Msa0311070:CDS
CAGAGGTATGCCTCAGATTG+AGG 0.511942 2_4:+5938266 Msa0311070:CDS
AAGATTGGAGAGCACATGTC+AGG 0.512685 2_4:+5938657 Msa0311070:CDS
TTGGGTATTGAGACTTTGGG+TGG 0.516399 2_4:+5937308 Msa0311070:CDS
GGTTCCATACAAGATAGTTA+AGG 0.518279 2_4:+5936300 Msa0311070:CDS
TCATGTGTTTCTGTTATGGA+AGG 0.518374 2_4:+5935981 Msa0311070:CDS
TCCATGTCAGAGCTGTTTGA+AGG 0.522642 2_4:+5937067 Msa0311070:CDS
TACCTCTGGGAGCAGGAGGA+AGG 0.523025 2_4:-5938251 None:intergenic
CCTGACGAGGCAGTTGCAAT+GGG 0.524301 2_4:+5937212 Msa0311070:CDS
GTGCCAAGCGCTTGATTGGT+AGG 0.526086 2_4:+5936239 Msa0311070:CDS
GATACCTGCCGAAGTGGCTA+AGG 0.526914 2_4:+5938536 Msa0311070:CDS
GCTTCCGACAACAAAATGCT+TGG 0.527578 2_4:+5938210 Msa0311070:CDS
GTTAGTTACAGCCTGACGCT+TGG 0.527720 2_4:-5936197 None:intergenic
ACGAAGTTCTTCTTGTTGGA+GGG 0.529005 2_4:+5937117 Msa0311070:CDS
GGCTCCAAATGGAGATGCAT+GGG 0.531898 2_4:+5936321 Msa0311070:CDS
TACCGAACGATAGGCGGAGA+AGG 0.532205 2_4:-5934799 None:intergenic
TGAGGCATACCTCTGGGAGC+AGG 0.532207 2_4:-5938258 None:intergenic
TCTGCCAAGGACAAGTCCAC+TGG 0.532923 2_4:+5938327 Msa0311070:CDS
CAGTATTCACCTAGTCAGAT+TGG 0.534024 2_4:+5936361 Msa0311070:CDS
CAAAGTGTTACAAGGTGAGC+GGG 0.534641 2_4:+5938182 Msa0311070:CDS
CGTCACGGCGTCGGAGAGAG+CGG 0.537213 2_4:-5934764 None:intergenic
TTCTGGTGAATGAGTTCAAG+AGG 0.539567 2_4:+5936829 Msa0311070:CDS
CAGCTCCCCTTTCTGAGAGA+AGG 0.539797 2_4:-5936158 None:intergenic
TGAGAGAAGGCAACCACAGA+TGG 0.539928 2_4:-5936145 None:intergenic
CTTCGTTCTCACCAAAATGA+AGG 0.540528 2_4:+5936387 Msa0311070:CDS
TCCTTCAAACAGCTCTGACA+TGG 0.540643 2_4:-5937068 None:intergenic
TCAGGATTTACTCCTTTACA+AGG 0.541474 2_4:-5937194 None:intergenic
TTGTAGGAATAGTAGTGTTG+CGG 0.541766 2_4:-5937352 None:intergenic
TTTCAATGATGCTCAAAGGC+AGG 0.541897 2_4:+5936471 Msa0311070:CDS
GAAACTTGATGCTGCAAACA+AGG 0.543023 2_4:+5938626 Msa0311070:CDS
GCGGAGCAAGGCAGTAGCGG+CGG 0.543480 2_4:-5934745 None:intergenic
AGCTTCACGAAGCCTTTGCA+AGG 0.544891 2_4:-5936886 None:intergenic
AATTTGCTGCTCTTTGCCAG+TGG 0.545585 2_4:-5938343 None:intergenic
AGGATAAGCTTGCCTTGCAA+AGG 0.547010 2_4:+5936874 Msa0311070:CDS
ATTTGAGAAGTGCGATGGAT+GGG 0.547476 2_4:+5938580 Msa0311070:CDS
TCGCCTACCAATCAAGCGCT+TGG 0.551371 2_4:-5936242 None:intergenic
GATTCTAGATCATGGCAAAA+CGG 0.551590 2_4:-5934529 None:intergenic
GTCTTTCTGAGCATGCAACT+CGG 0.554207 2_4:-5938424 None:intergenic
GCGTCGGAGAGAGCGGAGCA+AGG 0.557757 2_4:-5934757 None:intergenic
AGGCAAGCTTATCCTTTGAA+AGG 0.559186 2_4:-5936866 None:intergenic
TAACCAATCATCACAATTGG+AGG 0.559190 2_4:-5938961 None:intergenic
AGGTGGGGACCAGGCTCCAG+AGG 0.561460 2_4:+5938716 Msa0311070:CDS
ACCTTGAGAACCACCAGATG+AGG 0.562067 2_4:-5938697 None:intergenic
GATTTGAGAAGTGCGATGGA+TGG 0.562641 2_4:+5938579 Msa0311070:CDS
AAGAAGCAACGTCACGGCGT+CGG 0.562747 2_4:-5934773 None:intergenic
GATGCATCAGCAGTGATGAA+AGG 0.563187 2_4:-5936963 None:intergenic
ATGTCAGGTGGCTCTAGTAG+TGG 0.564590 2_4:+5938672 Msa0311070:CDS
TTCAAGGTGAAAGCAACAAA+CGG 0.565535 2_4:+5936759 Msa0311070:intron
TGTTTCTGTTATGGAAGGAA+AGG 0.568885 2_4:+5935986 Msa0311070:CDS
AGGCAGGCAACAAAAGATGC+TGG 0.572362 2_4:+5936487 Msa0311070:CDS
ACCTTTGACATTGATGCCAA+CGG 0.572611 2_4:+5938291 Msa0311070:CDS
AGATGTTACCGAACGATAGG+CGG 0.574124 2_4:-5934805 None:intergenic
TGAGAGTATTGACCTTTCAA+AGG 0.575285 2_4:+5936854 Msa0311070:CDS
AGGCTCCAAATGGAGATGCA+TGG 0.577676 2_4:+5936320 Msa0311070:CDS
CCAATAACATCATTTCCAGC+AGG 0.577923 2_4:-5935936 None:intergenic
ATATGAAAGTGCAGCAGCAG+TGG 0.582158 2_4:-5936551 None:intergenic
AAGAGATGTTACCGAACGAT+AGG 0.583070 2_4:-5934808 None:intergenic
ACCGTTGGCATCAATGTCAA+AGG 0.584830 2_4:-5938292 None:intergenic
TCAAAGTGTTACAAGGTGAG+CGG 0.588467 2_4:+5938181 Msa0311070:CDS
GTGGTGTAACATCCAAGAGT+AGG 0.589218 2_4:-5937280 None:intergenic
ATTACTATTAAGTCATCTGG+TGG 0.593329 2_4:+5938363 Msa0311070:CDS
AGTAGTGGTCCCTCATCTGG+TGG 0.593581 2_4:+5938687 Msa0311070:CDS
CTTATTTCAATGATGCTCAA+AGG 0.594949 2_4:+5936467 Msa0311070:CDS
TCAATCTGAGGCATACCTCT+GGG 0.595029 2_4:-5938264 None:intergenic
GCTGACAATCAAACACAAGT+AGG 0.598347 2_4:+5938156 Msa0311070:CDS
GGTTGCCTTCTCTCAGAAAG+GGG 0.599666 2_4:+5936153 Msa0311070:CDS
TTTGAGAAGTGCGATGGATG+GGG 0.599804 2_4:+5938581 Msa0311070:CDS
TTCTGATTTGAGAAGTGCGA+TGG 0.600338 2_4:+5938575 Msa0311070:CDS
TATGAAAGTGCAGCAGCAGT+GGG 0.600491 2_4:-5936550 None:intergenic
TTACTATTAAGTCATCTGGT+GGG 0.600855 2_4:+5938364 Msa0311070:CDS
TGACACTTTCTTGGGAGGAG+AGG 0.601649 2_4:+5936782 Msa0311070:CDS
GGACTTGTCCTTGGCAGACA+CGG 0.604046 2_4:-5938322 None:intergenic
CAATTGTGACCTACATGTGC+AGG 0.606157 2_4:-5935803 None:intergenic
AACGGTGACACTTTCTTGGG+AGG 0.609522 2_4:+5936777 Msa0311070:CDS
TATTGTTACCGTGTCTGCCA+AGG 0.609868 2_4:+5938314 Msa0311070:CDS
GAAAAGCCTAAGTGAATACA+GGG 0.610643 2_4:+5938509 Msa0311070:CDS
GGCATACCTCTGGGAGCAGG+AGG 0.611402 2_4:-5938255 None:intergenic
CCTTGAGAACCACCAGATGA+GGG 0.613822 2_4:-5938696 None:intergenic
CAATTGGAGGATAAACCACT+AGG 0.618412 2_4:-5938948 None:intergenic
GCAATGGGAGCAGCACTCCA+GGG 0.620916 2_4:+5937227 Msa0311070:CDS
GCGTCCAGCTAGAAACCACT+AGG 0.621801 2_4:-5938769 None:intergenic
TGGTAGAATTGCAGGTCTTG+AGG 0.622522 2_4:+5936507 Msa0311070:CDS
GGCCTTCCTCCTGCTCCCAG+AGG 0.622811 2_4:+5938249 Msa0311070:CDS
AAAGTCATCGAGAATTCTGA+AGG 0.626296 2_4:+5936109 Msa0311070:CDS
GTCTCAATACCCAAAGAGAG+TGG 0.627222 2_4:-5937299 None:intergenic
TGTGCCAAAAGTCCAGGAGG+TGG 0.629804 2_4:+5937148 Msa0311070:CDS
GGAGAAGATACCTGCCGAAG+TGG 0.630286 2_4:+5938530 Msa0311070:CDS
ACGAAGGCACCAATCTGACT+AGG 0.630672 2_4:-5936370 None:intergenic
TGCACGAACTACACCATCTG+TGG 0.631245 2_4:+5936132 Msa0311070:CDS
AGACACGGTAACAATACCGT+TGG 0.636553 2_4:-5938307 None:intergenic
TCCAGAGGCAGAATATGAAG+AGG 0.637119 2_4:+5938731 Msa0311070:CDS
GGATGCAAATATTTCTACCA+AGG 0.638342 2_4:+5937088 Msa0311070:CDS
GTAGGAATCAAAGTGTTACA+AGG 0.639471 2_4:+5938174 Msa0311070:CDS
ATTGGAGAGCACATGTCAGG+TGG 0.645198 2_4:+5938660 Msa0311070:CDS
TTCATATGGGATGACAAACA+AGG 0.648584 2_4:+5936567 Msa0311070:CDS
GTGCTCTCCAATCTTGGAGA+CGG 0.649417 2_4:-5938649 None:intergenic
CGAAGTGGCTAAGGAAATCG+AGG 0.649728 2_4:+5938545 Msa0311070:CDS
ATATTGAAATCTGTGCCTAG+TGG 0.650410 2_4:+5938933 Msa0311070:three_prime_UTR
TATGGGATGACAAACAAGGA+AGG 0.655329 2_4:+5936571 Msa0311070:CDS
TCAAAGGTGACCTCAATCTG+AGG 0.661059 2_4:-5938276 None:intergenic
AGGAAGAAGAAGCAACGTCA+CGG 0.662284 2_4:-5934779 None:intergenic
AACACTAAGCCTGCACATGT+AGG 0.670184 2_4:+5935794 Msa0311070:CDS
CATCAAATGTTCCACCACCA+AGG 0.676130 2_4:-5936612 None:intergenic
GCGGCCATAGCGAGAAAACG+AGG 0.677813 2_4:-5934726 None:intergenic
CTCCAGGGTGGTATCCTACG+TGG 0.686633 2_4:+5937242 Msa0311070:CDS
TAAAGGAGTAAATCCTGACG+AGG 0.713039 2_4:+5937199 Msa0311070:CDS
TCGTGTGCCAAAAGTCCAGG+AGG 0.724781 2_4:+5937145 Msa0311070:CDS
TGAAGAAGTGAGACTCCTAG+TGG 0.725677 2_4:+5938754 Msa0311070:exon
GCTCTTTGACATCTCCACGT+AGG 0.729469 2_4:-5937256 None:intergenic
CTCCACGTAGGATACCACCC+TGG 0.737006 2_4:-5937244 None:intergenic
ATGGGAGCAGCACTCCAGGG+TGG 0.741120 2_4:+5937230 Msa0311070:CDS
ATTCACCAGAAAATCCAACA+AGG 0.754480 2_4:-5936817 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAGCTAAAA+CGG - chr2_4:5934883-5934902 None:intergenic 10.0%
!!! TTTTATTTTTTGTTAATTGA+AGG + chr2_4:5935409-5935428 Msa0311070:intron 10.0%
!!! TTTATTTTTTGTTAATTGAA+GGG + chr2_4:5935410-5935429 Msa0311070:intron 10.0%
!! AAAAGATCTATTCTATAAAA+TGG - chr2_4:5935027-5935046 None:intergenic 15.0%
!!! AAACATTTTAGGATAATTAT+TGG - chr2_4:5935291-5935310 None:intergenic 15.0%
!!! TAATAACATTTTTCATTTCA+AGG + chr2_4:5936743-5936762 Msa0311070:intron 15.0%
!!! TTTTGATAAATATAAATGTG+TGG - chr2_4:5937490-5937509 None:intergenic 15.0%
!! ACATTTATGTTTATTAGAAA+CGG + chr2_4:5937839-5937858 Msa0311070:intron 15.0%
!! AATTATTATTTGACAATCAT+CGG - chr2_4:5937925-5937944 None:intergenic 15.0%
!!! TTTAGTTTAGTAGAAATATA+AGG + chr2_4:5938842-5938861 Msa0311070:three_prime_UTR 15.0%
!! AATGTGCAAAATAAAATAAA+TGG - chr2_4:5938987-5939006 None:intergenic 15.0%
!!! TTATCCTAAAATGTTTTCAT+AGG + chr2_4:5935295-5935314 Msa0311070:intron 20.0%
!!! TTTTGTTTTTGTCAATCAAA+GGG + chr2_4:5935539-5935558 Msa0311070:intron 20.0%
!!! AACTTTGTTTTTCTCATTTA+CGG + chr2_4:5935631-5935650 Msa0311070:intron 20.0%
!!! AGCATAGTATTATTTTATGA+AGG + chr2_4:5935731-5935750 Msa0311070:intron 20.0%
!!! TCCATTTTAGAAATTTCTAA+TGG + chr2_4:5936637-5936656 Msa0311070:CDS 20.0%
!!! ACCATTAGAAATTTCTAAAA+TGG - chr2_4:5936641-5936660 None:intergenic 20.0%
!!! TTCAGTTTTTACAAAGTAAT+TGG + chr2_4:5937975-5937994 Msa0311070:intron 20.0%
!!! TTATTTTTGTATCTAATGCT+GGG + chr2_4:5938869-5938888 Msa0311070:three_prime_UTR 20.0%
! TATATGGATCTTTCATCAAT+TGG - chr2_4:5934493-5934512 None:intergenic 25.0%
! TATATATGAGGGTTTAGTTA+GGG - chr2_4:5934630-5934649 None:intergenic 25.0%
! AGATCTATTCTATAAAATGG+AGG - chr2_4:5935024-5935043 None:intergenic 25.0%
!!! TTATTTTTGTGCATGCTATA+AGG + chr2_4:5935214-5935233 Msa0311070:intron 25.0%
!!! GGTGTTTTTATAAGCTATAT+TGG + chr2_4:5935235-5935254 Msa0311070:intron 25.0%
!! AGAACCTATGAAAACATTTT+AGG - chr2_4:5935302-5935321 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGACTATT+CGG - chr2_4:5935326-5935345 None:intergenic 25.0%
!!! TTGCTTTTGTTTTTGTCAAT+CGG + chr2_4:5935462-5935481 Msa0311070:intron 25.0%
!!! CTTTTGTTTTTGTCAATCAA+AGG + chr2_4:5935538-5935557 Msa0311070:intron 25.0%
! GAAAAACAAAGTTGTAGATT+AGG - chr2_4:5935624-5935643 None:intergenic 25.0%
!!! GATGTTATTGGTATTGATTT+AGG + chr2_4:5935948-5935967 Msa0311070:CDS 25.0%
!! TAATTCATGTGTTTCTGTTA+TGG + chr2_4:5935977-5935996 Msa0311070:CDS 25.0%
! AATCCAATCAATGGAAATAT+TGG - chr2_4:5936055-5936074 None:intergenic 25.0%
! AACTCAAAAAGAGATGAAAA+TGG + chr2_4:5936279-5936298 Msa0311070:CDS 25.0%
!!! AATTTCTAATGGTGTTTTTG+AGG + chr2_4:5936648-5936667 Msa0311070:CDS 25.0%
! ATTAACTAGATCCAAATTTG+AGG + chr2_4:5937010-5937029 Msa0311070:CDS 25.0%
! TTCTAACAAACATAAACGTA+TGG - chr2_4:5937623-5937642 None:intergenic 25.0%
! CTGAATACAATTCCAAAAAT+GGG - chr2_4:5937745-5937764 None:intergenic 25.0%
! ACTGAATACAATTCCAAAAA+TGG - chr2_4:5937746-5937765 None:intergenic 25.0%
! TTCAGTCTTTACAAAGTAAT+TGG + chr2_4:5937760-5937779 Msa0311070:intron 25.0%
! AAGTAATTGGACATTCAAAA+TGG + chr2_4:5937773-5937792 Msa0311070:intron 25.0%
! CTATAATACACATACATTTG+AGG + chr2_4:5938033-5938052 Msa0311070:intron 25.0%
! CAAATTACTATTAAGTCATC+TGG + chr2_4:5938360-5938379 Msa0311070:CDS 25.0%
!! TGATGATGATATTCAAAAGA+TGG + chr2_4:5938392-5938411 Msa0311070:CDS 25.0%
! TCAACAGTTCTTTAAATAAC+AGG + chr2_4:5938800-5938819 Msa0311070:three_prime_UTR 25.0%
!!! CTTATTTTTGTATCTAATGC+TGG + chr2_4:5938868-5938887 Msa0311070:three_prime_UTR 25.0%
!!! TATTTTTGTATCTAATGCTG+GGG + chr2_4:5938870-5938889 Msa0311070:three_prime_UTR 25.0%
! TTTGCACATTAACAAATGAA+TGG + chr2_4:5938997-5939016 Msa0311070:three_prime_UTR 25.0%
! AGAAAAAAAAAAAGAGCAGA+TGG + chr2_4:5939086-5939105 Msa0311070:three_prime_UTR 25.0%
! GAAAAAAAAAAAGAGCAGAT+GGG + chr2_4:5939087-5939106 Msa0311070:three_prime_UTR 25.0%
! AAAAAAAAAAAGAGCAGATG+GGG + chr2_4:5939088-5939107 Msa0311070:three_prime_UTR 25.0%
CAAAAGAAGATTCTAGATCA+TGG - chr2_4:5934540-5934559 None:intergenic 30.0%
CTATATATGAGGGTTTAGTT+AGG - chr2_4:5934631-5934650 None:intergenic 30.0%
! GAAGGGTTTTCTATATATGA+GGG - chr2_4:5934641-5934660 None:intergenic 30.0%
! AGAAGGGTTTTCTATATATG+AGG - chr2_4:5934642-5934661 None:intergenic 30.0%
ACAAAGAAAGCTGAAAATCA+AGG - chr2_4:5934859-5934878 None:intergenic 30.0%
!! CATGTGTATTGCTTTTGTTT+AGG + chr2_4:5934932-5934951 Msa0311070:intron 30.0%
!! TAAGTTTTGTGAGACTATTC+GGG - chr2_4:5935325-5935344 None:intergenic 30.0%
TGTTACAAATGTTACCTGAA+TGG - chr2_4:5935845-5935864 None:intergenic 30.0%
GTTCCAATATTTCCATTGAT+TGG + chr2_4:5936049-5936068 Msa0311070:intron 30.0%
CTTATTTCAATGATGCTCAA+AGG + chr2_4:5936467-5936486 Msa0311070:CDS 30.0%
ATTAACTAGAGCCTCAAATT+TGG - chr2_4:5937024-5937043 None:intergenic 30.0%
TATTCCTACAAAAAAGAGTC+AGG + chr2_4:5937364-5937383 Msa0311070:CDS 30.0%
!!! ATTACCTGACTCTTTTTTGT+AGG - chr2_4:5937371-5937390 None:intergenic 30.0%
TGTTATATAACAATCAGCAG+TGG - chr2_4:5937402-5937421 None:intergenic 30.0%
TGATTACACTTACACATCTA+AGG + chr2_4:5937669-5937688 Msa0311070:intron 30.0%
TATTAGTTGACAATCATCAG+TGG - chr2_4:5937707-5937726 None:intergenic 30.0%
AATTCCAAAAATGGGAAACT+CGG - chr2_4:5937737-5937756 None:intergenic 30.0%
AAGTCAACAAAATACGTCAA+CGG - chr2_4:5937865-5937884 None:intergenic 30.0%
TGATTACACTTACACATCTA+AGG + chr2_4:5937669-5937688 Msa0311070:intron 30.0%
TATTATTTGACAATCATCGG+TGG - chr2_4:5937922-5937941 None:intergenic 30.0%
CTGAATACACTTCCAAAAAT+GGG - chr2_4:5937960-5937979 None:intergenic 30.0%
ACTGAATACACTTCCAAAAA+TGG - chr2_4:5937961-5937980 None:intergenic 30.0%
! AGCTTTGTGTATTTATGTCA+TGG + chr2_4:5938080-5938099 Msa0311070:intron 30.0%
CTTTGTAATATCATTGTTCC+AGG + chr2_4:5938119-5938138 Msa0311070:intron 30.0%
ATTACTATTAAGTCATCTGG+TGG + chr2_4:5938363-5938382 Msa0311070:CDS 30.0%
TTACTATTAAGTCATCTGGT+GGG + chr2_4:5938364-5938383 Msa0311070:CDS 30.0%
!!! TGTTTTGAAATTGCTACTAG+AGG + chr2_4:5939031-5939050 Msa0311070:three_prime_UTR 30.0%
!!! GTTTTGAAATTGCTACTAGA+GGG + chr2_4:5939032-5939051 Msa0311070:three_prime_UTR 30.0%
TGGTAAGAGTAATGAAGAAA+GGG + chr2_4:5939061-5939080 Msa0311070:three_prime_UTR 30.0%
AAAAAAAAAAGAGCAGATGG+GGG + chr2_4:5939089-5939108 Msa0311070:three_prime_UTR 30.0%
AAAGAGAGAACTACAATAGT+AGG - chr2_4:5939134-5939153 None:intergenic 30.0%
TCTTTGACTGTATCTTATGT+TGG + chr2_4:5939149-5939168 Msa0311070:three_prime_UTR 30.0%
CTTTGACTGTATCTTATGTT+GGG + chr2_4:5939150-5939169 Msa0311070:three_prime_UTR 30.0%
! TGTCGTATCGTGTCATTATA+TGG - chr2_4:5934509-5934528 None:intergenic 35.0%
GATTCTAGATCATGGCAAAA+CGG - chr2_4:5934532-5934551 None:intergenic 35.0%
!! GATCTAGAATCTTCTTTTGC+TGG + chr2_4:5934541-5934560 Msa0311070:five_prime_UTR 35.0%
TGATAGAAAGAGAGAGAGAA+GGG - chr2_4:5934658-5934677 None:intergenic 35.0%
!! GAACTGATTTTGAGCTTGTT+TGG + chr2_4:5935111-5935130 Msa0311070:intron 35.0%
!! CTTCTACAGCTTATTTTCGT+AGG - chr2_4:5935265-5935284 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr2_4:5935358-5935377 Msa0311070:intron 35.0%
!!! GATGTTGTTTTGCAGTTGAT+AGG + chr2_4:5935770-5935789 Msa0311070:intron 35.0%
! TCATGTGTTTCTGTTATGGA+AGG + chr2_4:5935981-5936000 Msa0311070:CDS 35.0%
! TGTTTCTGTTATGGAAGGAA+AGG + chr2_4:5935986-5936005 Msa0311070:CDS 35.0%
! TCAGAATTCTCGATGACTTT+TGG - chr2_4:5936109-5936128 None:intergenic 35.0%
AAAGTCATCGAGAATTCTGA+AGG + chr2_4:5936109-5936128 Msa0311070:CDS 35.0%
GGTTCCATACAAGATAGTTA+AGG + chr2_4:5936300-5936319 Msa0311070:CDS 35.0%
AAGATAGTTAAGGCTCCAAA+TGG + chr2_4:5936310-5936329 Msa0311070:CDS 35.0%
! TTCTGCAGTTTCCTTCATTT+TGG - chr2_4:5936401-5936420 None:intergenic 35.0%
TGAGCATCATTGAAATAAGC+TGG - chr2_4:5936466-5936485 None:intergenic 35.0%
TTCATATGGGATGACAAACA+AGG + chr2_4:5936567-5936586 Msa0311070:CDS 35.0%
!!! TCCTTTTTTAACCTGTCTGA+AGG + chr2_4:5936695-5936714 Msa0311070:intron 35.0%
TCCTTCAGACAGGTTAAAAA+AGG - chr2_4:5936699-5936718 None:intergenic 35.0%
TTCAAGGTGAAAGCAACAAA+CGG + chr2_4:5936759-5936778 Msa0311070:intron 35.0%
ATTCACCAGAAAATCCAACA+AGG - chr2_4:5936820-5936839 None:intergenic 35.0%
!! TGAGAGTATTGACCTTTCAA+AGG + chr2_4:5936854-5936873 Msa0311070:CDS 35.0%
TAACTTGATCGAACGAACTA+AGG + chr2_4:5937043-5937062 Msa0311070:CDS 35.0%
! GGATGCAAATATTTCTACCA+AGG + chr2_4:5937088-5937107 Msa0311070:CDS 35.0%
ATTGACGAAGTTCTTCTTGT+TGG + chr2_4:5937113-5937132 Msa0311070:CDS 35.0%
TCAGGATTTACTCCTTTACA+AGG - chr2_4:5937197-5937216 None:intergenic 35.0%
!! TCTTTGGGTATTGAGACTTT+GGG + chr2_4:5937305-5937324 Msa0311070:CDS 35.0%
TTGTAGGAATAGTAGTGTTG+CGG - chr2_4:5937355-5937374 None:intergenic 35.0%
GTCTCTAAGTTGCTAATCTT+TGG + chr2_4:5937425-5937444 Msa0311070:intron 35.0%
TTCTGTCTTTACGAAGTAAC+TGG + chr2_4:5937455-5937474 Msa0311070:intron 35.0%
ACTCATTACGCACACATTTA+AGG + chr2_4:5937565-5937584 Msa0311070:intron 35.0%
ACTTCCAAAAATGGGAAACT+CGG - chr2_4:5937952-5937971 None:intergenic 35.0%
! CATTCAAACCATTTTGCTTG+AGG + chr2_4:5937999-5938018 Msa0311070:intron 35.0%
ACAAGATACCTCAAGCAAAA+TGG - chr2_4:5938010-5938029 None:intergenic 35.0%
! ATTGTTCCAGGTCTTTTCAA+CGG + chr2_4:5938131-5938150 Msa0311070:intron 35.0%
! GTAGGAATCAAAGTGTTACA+AGG + chr2_4:5938174-5938193 Msa0311070:CDS 35.0%
!! TTCTCCAAGCATTTTGTTGT+CGG - chr2_4:5938217-5938236 None:intergenic 35.0%
AGAAAAGCCTAAGTGAATAC+AGG + chr2_4:5938508-5938527 Msa0311070:CDS 35.0%
GAAAAGCCTAAGTGAATACA+GGG + chr2_4:5938509-5938528 Msa0311070:CDS 35.0%
! TCTAATGCTGGGGATTTTAT+TGG + chr2_4:5938880-5938899 Msa0311070:three_prime_UTR 35.0%
!! GGGGATTTTATTGGTGTTTT+TGG + chr2_4:5938889-5938908 Msa0311070:three_prime_UTR 35.0%
ATATTGAAATCTGTGCCTAG+TGG + chr2_4:5938933-5938952 Msa0311070:three_prime_UTR 35.0%
TATCCTCCAATTGTGATGAT+TGG + chr2_4:5938958-5938977 Msa0311070:three_prime_UTR 35.0%
TAACCAATCATCACAATTGG+AGG - chr2_4:5938964-5938983 None:intergenic 35.0%
TGGTAACCAATCATCACAAT+TGG - chr2_4:5938967-5938986 None:intergenic 35.0%
CTGGTAAGAGTAATGAAGAA+AGG + chr2_4:5939060-5939079 Msa0311070:three_prime_UTR 35.0%
CTTCTTCTTGCCAAAGAAAC+AGG - chr2_4:5934572-5934591 None:intergenic 40.0%
! AGAAGCGCACTAGAATAATC+TGG + chr2_4:5934587-5934606 Msa0311070:five_prime_UTR 40.0%
! GAGGGTTTAGTTAGGGTTTT+TGG - chr2_4:5934623-5934642 None:intergenic 40.0%
GTGATAGAAAGAGAGAGAGA+AGG - chr2_4:5934659-5934678 None:intergenic 40.0%
! TTTTCCTCGTTTTCTCGCTA+TGG + chr2_4:5934722-5934741 Msa0311070:exon 40.0%
AAGAGATGTTACCGAACGAT+AGG - chr2_4:5934811-5934830 None:intergenic 40.0%
TAAAGTGCACGACAGTGAAA+GGG - chr2_4:5934836-5934855 None:intergenic 40.0%
!!! CTCTCTTGTTTTGCAGTTCA+AGG + chr2_4:5935913-5935932 Msa0311070:intron 40.0%
CCAATAACATCATTTCCAGC+AGG - chr2_4:5935939-5935958 None:intergenic 40.0%
CCTGCTGGAAATGATGTTAT+TGG + chr2_4:5935936-5935955 Msa0311070:CDS 40.0%
GTCAGCACAAATCCAATCAA+TGG - chr2_4:5936064-5936083 None:intergenic 40.0%
AACCCAGTAAACACTATCTC+TGG + chr2_4:5936217-5936236 Msa0311070:CDS 40.0%
CACCAGAGATAGTGTTTACT+GGG - chr2_4:5936222-5936241 None:intergenic 40.0%
GGAGCCTTAACTATCTTGTA+TGG - chr2_4:5936307-5936326 None:intergenic 40.0%
! ATGCATGGGTTGAAGCTAAT+GGG + chr2_4:5936335-5936354 Msa0311070:CDS 40.0%
CAGTATTCACCTAGTCAGAT+TGG + chr2_4:5936361-5936380 Msa0311070:CDS 40.0%
!! CTTCATTTTGGTGAGAACGA+AGG - chr2_4:5936389-5936408 None:intergenic 40.0%
CTTCGTTCTCACCAAAATGA+AGG + chr2_4:5936387-5936406 Msa0311070:CDS 40.0%
GAAACTGCAGAAGCTTATCT+TGG + chr2_4:5936409-5936428 Msa0311070:CDS 40.0%
TTTCAATGATGCTCAAAGGC+AGG + chr2_4:5936471-5936490 Msa0311070:CDS 40.0%
AAAGATGCTGGTAGAATTGC+AGG + chr2_4:5936499-5936518 Msa0311070:CDS 40.0%
TATGGGATGACAAACAAGGA+AGG + chr2_4:5936571-5936590 Msa0311070:CDS 40.0%
!!! CTCATTGCTGTTTTTGACCT+TGG + chr2_4:5936595-5936614 Msa0311070:CDS 40.0%
!!! ATTGCTGTTTTTGACCTTGG+TGG + chr2_4:5936598-5936617 Msa0311070:CDS 40.0%
CTCATACTATTCCTTCAGAC+AGG - chr2_4:5936709-5936728 None:intergenic 40.0%
GTCTGAAGGAATAGTATGAG+AGG + chr2_4:5936709-5936728 Msa0311070:intron 40.0%
AACAAACGGTGACACTTTCT+TGG + chr2_4:5936773-5936792 Msa0311070:CDS 40.0%
ACAAACGGTGACACTTTCTT+GGG + chr2_4:5936774-5936793 Msa0311070:CDS 40.0%
!! CAATGCCTTGTTGGATTTTC+TGG + chr2_4:5936812-5936831 Msa0311070:CDS 40.0%
TTCTGGTGAATGAGTTCAAG+AGG + chr2_4:5936829-5936848 Msa0311070:CDS 40.0%
AGGCAAGCTTATCCTTTGAA+AGG - chr2_4:5936869-5936888 None:intergenic 40.0%
AAGAACTTCGTCAATGTCCT+TGG - chr2_4:5937108-5937127 None:intergenic 40.0%
ACGAAGTTCTTCTTGTTGGA+GGG + chr2_4:5937117-5937136 Msa0311070:CDS 40.0%
! GAGGTGGTTTCGTCAATTTT+TGG + chr2_4:5937164-5937183 Msa0311070:CDS 40.0%
TTTGGCAAGTCTCCTTGTAA+AGG + chr2_4:5937182-5937201 Msa0311070:CDS 40.0%
TAAAGGAGTAAATCCTGACG+AGG + chr2_4:5937199-5937218 Msa0311070:CDS 40.0%
GATGTTACACCACTCTCTTT+GGG + chr2_4:5937290-5937309 Msa0311070:CDS 40.0%
!! CTCTTTGGGTATTGAGACTT+TGG + chr2_4:5937304-5937323 Msa0311070:CDS 40.0%
CTTTGGGTGGTATCTTTACA+AGG + chr2_4:5937321-5937340 Msa0311070:CDS 40.0%
!! AACAATCAGCAGTGGATTGA+AGG - chr2_4:5937394-5937413 None:intergenic 40.0%
AATGTGTGCGTAATGAGTGA+GGG - chr2_4:5937563-5937582 None:intergenic 40.0%
AAATGTGTGCGTAATGAGTG+AGG - chr2_4:5937564-5937583 None:intergenic 40.0%
! GTTTCCGAGTTTCCCATTTT+TGG + chr2_4:5937730-5937749 Msa0311070:intron 40.0%
! GTTTCCGAGTTTCCCATTTT+TGG + chr2_4:5937730-5937749 Msa0311070:intron 40.0%
GCTGACAATCAAACACAAGT+AGG + chr2_4:5938156-5938175 Msa0311070:CDS 40.0%
! TCAAAGTGTTACAAGGTGAG+CGG + chr2_4:5938181-5938200 Msa0311070:CDS 40.0%
CTTGGAGAATTTGAGCTTGT+TGG + chr2_4:5938228-5938247 Msa0311070:CDS 40.0%
ACCTTTGACATTGATGCCAA+CGG + chr2_4:5938291-5938310 Msa0311070:CDS 40.0%
CGATCAGACTCTTTCTTTCT+TGG - chr2_4:5938449-5938468 None:intergenic 40.0%
TCTTCTCCCTGTATTCACTT+AGG - chr2_4:5938518-5938537 None:intergenic 40.0%
! TTCTGATTTGAGAAGTGCGA+TGG + chr2_4:5938575-5938594 Msa0311070:CDS 40.0%
! ATTTGAGAAGTGCGATGGAT+GGG + chr2_4:5938580-5938599 Msa0311070:CDS 40.0%
GAAACTTGATGCTGCAAACA+AGG + chr2_4:5938626-5938645 Msa0311070:CDS 40.0%
CAATTGGAGGATAAACCACT+AGG - chr2_4:5938951-5938970 None:intergenic 40.0%
TTGCTACTAGAGGGTAATAC+TGG + chr2_4:5939041-5939060 Msa0311070:three_prime_UTR 40.0%
GACTGTATCTTATGTTGGGT+TGG + chr2_4:5939154-5939173 Msa0311070:three_prime_UTR 40.0%
AGGAAGAAGAAGCAACGTCA+CGG - chr2_4:5934782-5934801 None:intergenic 45.0%
AGATGTTACCGAACGATAGG+CGG - chr2_4:5934808-5934827 None:intergenic 45.0%
AAAGTGCACGACAGTGAAAG+GGG - chr2_4:5934835-5934854 None:intergenic 45.0%
GTAAAGTGCACGACAGTGAA+AGG - chr2_4:5934837-5934856 None:intergenic 45.0%
AACAACGAGCCTGTTTGGAT+TGG - chr2_4:5935370-5935389 None:intergenic 45.0%
CAACAAACAACGAGCCTGTT+TGG - chr2_4:5935375-5935394 None:intergenic 45.0%
AACACTAAGCCTGCACATGT+AGG + chr2_4:5935794-5935813 Msa0311070:CDS 45.0%
CAATTGTGACCTACATGTGC+AGG - chr2_4:5935806-5935825 None:intergenic 45.0%
CTGCACATGTAGGTCACAAT+TGG + chr2_4:5935804-5935823 Msa0311070:CDS 45.0%
CAAGTTTGTCTCGACCATTC+AGG + chr2_4:5935828-5935847 Msa0311070:CDS 45.0%
TGGTTGCCTTCTCTCAGAAA+GGG + chr2_4:5936152-5936171 Msa0311070:CDS 45.0%
GCACCAGAGATAGTGTTTAC+TGG - chr2_4:5936223-5936242 None:intergenic 45.0%
CTTGATTGGTAGGCGATTTG+AGG + chr2_4:5936249-5936268 Msa0311070:CDS 45.0%
TCAACCCATGCATCTCCATT+TGG - chr2_4:5936328-5936347 None:intergenic 45.0%
! GATGCATGGGTTGAAGCTAA+TGG + chr2_4:5936334-5936353 Msa0311070:CDS 45.0%
TGGTAGAATTGCAGGTCTTG+AGG + chr2_4:5936507-5936526 Msa0311070:CDS 45.0%
! TATGAAAGTGCAGCAGCAGT+GGG - chr2_4:5936553-5936572 None:intergenic 45.0%
! ATATGAAAGTGCAGCAGCAG+TGG - chr2_4:5936554-5936573 None:intergenic 45.0%
ACTGCTGCTGCACTTTCATA+TGG + chr2_4:5936553-5936572 Msa0311070:CDS 45.0%
CTGCTGCTGCACTTTCATAT+GGG + chr2_4:5936554-5936573 Msa0311070:CDS 45.0%
CATCAAATGTTCCACCACCA+AGG - chr2_4:5936615-5936634 None:intergenic 45.0%
AGGATAAGCTTGCCTTGCAA+AGG + chr2_4:5936874-5936893 Msa0311070:CDS 45.0%
GATGCATCAGCAGTGATGAA+AGG - chr2_4:5936966-5936985 None:intergenic 45.0%
TTCATCACTGCTGATGCATC+TGG + chr2_4:5936966-5936985 Msa0311070:CDS 45.0%
TCCATGTCAGAGCTGTTTGA+AGG + chr2_4:5937067-5937086 Msa0311070:CDS 45.0%
! TCCTTCAAACAGCTCTGACA+TGG - chr2_4:5937071-5937090 None:intergenic 45.0%
GACGAAGTTCTTCTTGTTGG+AGG + chr2_4:5937116-5937135 Msa0311070:CDS 45.0%
AAATTGACGAAACCACCTCC+TGG - chr2_4:5937163-5937182 None:intergenic 45.0%
TGTCAAAGAGCTCCTACTCT+TGG + chr2_4:5937268-5937287 Msa0311070:CDS 45.0%
GTGGTGTAACATCCAAGAGT+AGG - chr2_4:5937283-5937302 None:intergenic 45.0%
GGATGTTACACCACTCTCTT+TGG + chr2_4:5937289-5937308 Msa0311070:CDS 45.0%
GTCTCAATACCCAAAGAGAG+TGG - chr2_4:5937302-5937321 None:intergenic 45.0%
!! TTGGGTATTGAGACTTTGGG+TGG + chr2_4:5937308-5937327 Msa0311070:CDS 45.0%
ATGTGTGCGTAATGAGTGAG+GGG - chr2_4:5937562-5937581 None:intergenic 45.0%
! CAAAGTGTTACAAGGTGAGC+GGG + chr2_4:5938182-5938201 Msa0311070:CDS 45.0%
GCTTCCGACAACAAAATGCT+TGG + chr2_4:5938210-5938229 Msa0311070:CDS 45.0%
! TCAATCTGAGGCATACCTCT+GGG - chr2_4:5938267-5938286 None:intergenic 45.0%
TCAAAGGTGACCTCAATCTG+AGG - chr2_4:5938279-5938298 None:intergenic 45.0%
ACCGTTGGCATCAATGTCAA+AGG - chr2_4:5938295-5938314 None:intergenic 45.0%
AGACACGGTAACAATACCGT+TGG - chr2_4:5938310-5938329 None:intergenic 45.0%
TATTGTTACCGTGTCTGCCA+AGG + chr2_4:5938314-5938333 Msa0311070:CDS 45.0%
!! AATTTGCTGCTCTTTGCCAG+TGG - chr2_4:5938346-5938365 None:intergenic 45.0%
GTCTTTCTGAGCATGCAACT+CGG - chr2_4:5938427-5938446 None:intergenic 45.0%
CTCGATTTCCTTAGCCACTT+CGG - chr2_4:5938547-5938566 None:intergenic 45.0%
! GATTTGAGAAGTGCGATGGA+TGG + chr2_4:5938579-5938598 Msa0311070:CDS 45.0%
! TTTGAGAAGTGCGATGGATG+GGG + chr2_4:5938581-5938600 Msa0311070:CDS 45.0%
TGACATGTGCTCTCCAATCT+TGG - chr2_4:5938658-5938677 None:intergenic 45.0%
! AAGATTGGAGAGCACATGTC+AGG + chr2_4:5938657-5938676 Msa0311070:CDS 45.0%
TCCAGAGGCAGAATATGAAG+AGG + chr2_4:5938731-5938750 Msa0311070:CDS 45.0%
ACCTCTTCATATTCTGCCTC+TGG - chr2_4:5938735-5938754 None:intergenic 45.0%
TGAAGAAGTGAGACTCCTAG+TGG + chr2_4:5938754-5938773 Msa0311070:exon 45.0%
! GCTGGCTGATCCTGTTTCTT+TGG + chr2_4:5934559-5934578 Msa0311070:five_prime_UTR 50.0%
TTCCTTCTCCGCCTATCGTT+CGG + chr2_4:5934797-5934816 Msa0311070:CDS 50.0%
! TTTTGCAGTTCAAGGCCTGC+TGG + chr2_4:5935921-5935940 Msa0311070:intron 50.0%
TGCACGAACTACACCATCTG+TGG + chr2_4:5936132-5936151 Msa0311070:CDS 50.0%
TGAGAGAAGGCAACCACAGA+TGG - chr2_4:5936148-5936167 None:intergenic 50.0%
GTGGTTGCCTTCTCTCAGAA+AGG + chr2_4:5936151-5936170 Msa0311070:CDS 50.0%
GGTTGCCTTCTCTCAGAAAG+GGG + chr2_4:5936153-5936172 Msa0311070:CDS 50.0%
GTTAGTTACAGCCTGACGCT+TGG - chr2_4:5936200-5936219 None:intergenic 50.0%
AGGCTCCAAATGGAGATGCA+TGG + chr2_4:5936320-5936339 Msa0311070:CDS 50.0%
GGCTCCAAATGGAGATGCAT+GGG + chr2_4:5936321-5936340 Msa0311070:CDS 50.0%
!! ACGAAGGCACCAATCTGACT+AGG - chr2_4:5936373-5936392 None:intergenic 50.0%
AGGCAGGCAACAAAAGATGC+TGG + chr2_4:5936487-5936506 Msa0311070:CDS 50.0%
!!! GCTGTTTTTGACCTTGGTGG+TGG + chr2_4:5936601-5936620 Msa0311070:CDS 50.0%
AACGGTGACACTTTCTTGGG+AGG + chr2_4:5936777-5936796 Msa0311070:CDS 50.0%
TGACACTTTCTTGGGAGGAG+AGG + chr2_4:5936782-5936801 Msa0311070:CDS 50.0%
GGACTTCGACAATGCCTTGT+TGG + chr2_4:5936803-5936822 Msa0311070:CDS 50.0%
AGCTTCACGAAGCCTTTGCA+AGG - chr2_4:5936889-5936908 None:intergenic 50.0%
! GAAACCACCTCCTGGACTTT+TGG - chr2_4:5937155-5937174 None:intergenic 50.0%
GCTCTTTGACATCTCCACGT+AGG - chr2_4:5937259-5937278 None:intergenic 50.0%
TGTGTGCGTAATGAGTGAGG+GGG - chr2_4:5937561-5937580 None:intergenic 50.0%
GTTACAAGGTGAGCGGGAAA+TGG + chr2_4:5938188-5938207 Msa0311070:CDS 50.0%
! CTCAATCTGAGGCATACCTC+TGG - chr2_4:5938268-5938287 None:intergenic 50.0%
! CAGAGGTATGCCTCAGATTG+AGG + chr2_4:5938266-5938285 Msa0311070:CDS 50.0%
! TTTGCCAGTGGACTTGTCCT+TGG - chr2_4:5938334-5938353 None:intergenic 50.0%
ATTTCCTTAGCCACTTCGGC+AGG - chr2_4:5938543-5938562 None:intergenic 50.0%
CGAAGTGGCTAAGGAAATCG+AGG + chr2_4:5938545-5938564 Msa0311070:CDS 50.0%
AACAAGGCCGTCTCCAAGAT+TGG + chr2_4:5938642-5938661 Msa0311070:CDS 50.0%
GTGCTCTCCAATCTTGGAGA+CGG - chr2_4:5938652-5938671 None:intergenic 50.0%
! ATTGGAGAGCACATGTCAGG+TGG + chr2_4:5938660-5938679 Msa0311070:CDS 50.0%
!! ATGTCAGGTGGCTCTAGTAG+TGG + chr2_4:5938672-5938691 Msa0311070:CDS 50.0%
TCTAGTAGTGGTCCCTCATC+TGG + chr2_4:5938684-5938703 Msa0311070:CDS 50.0%
CCTTGAGAACCACCAGATGA+GGG - chr2_4:5938699-5938718 None:intergenic 50.0%
ACCTTGAGAACCACCAGATG+AGG - chr2_4:5938700-5938719 None:intergenic 50.0%
TCATCTGGTGGTTCTCAAGG+TGG + chr2_4:5938699-5938718 Msa0311070:CDS 50.0%
CATCTGGTGGTTCTCAAGGT+GGG + chr2_4:5938700-5938719 Msa0311070:CDS 50.0%
ATCTGGTGGTTCTCAAGGTG+GGG + chr2_4:5938701-5938720 Msa0311070:CDS 50.0%
!! GACTCCTAGTGGTTTCTAGC+TGG + chr2_4:5938765-5938784 Msa0311070:three_prime_UTR 50.0%
AAGAAGCAACGTCACGGCGT+CGG - chr2_4:5934776-5934795 None:intergenic 55.0%
TACCGAACGATAGGCGGAGA+AGG - chr2_4:5934802-5934821 None:intergenic 55.0%
! CAGCTCCCCTTTCTGAGAGA+AGG - chr2_4:5936161-5936180 None:intergenic 55.0%
CAGAAAGGGGAGCTGCTTGT+AGG + chr2_4:5936166-5936185 Msa0311070:CDS 55.0%
! TCTGGTGCCAAGCGCTTGAT+TGG + chr2_4:5936235-5936254 Msa0311070:CDS 55.0%
GTGCCAAGCGCTTGATTGGT+AGG + chr2_4:5936239-5936258 Msa0311070:CDS 55.0%
TCGCCTACCAATCAAGCGCT+TGG - chr2_4:5936245-5936264 None:intergenic 55.0%
GACTCGTGTGCCAAAAGTCC+AGG + chr2_4:5937142-5937161 Msa0311070:CDS 55.0%
TCGTGTGCCAAAAGTCCAGG+AGG + chr2_4:5937145-5937164 Msa0311070:CDS 55.0%
TGTGCCAAAAGTCCAGGAGG+TGG + chr2_4:5937148-5937167 Msa0311070:CDS 55.0%
TCCTGACGAGGCAGTTGCAA+TGG + chr2_4:5937211-5937230 Msa0311070:CDS 55.0%
CCTGACGAGGCAGTTGCAAT+GGG + chr2_4:5937212-5937231 Msa0311070:CDS 55.0%
! GTAATGAGTGAGGGGGTGTG+GGG - chr2_4:5937554-5937573 None:intergenic 55.0%
! CGTAATGAGTGAGGGGGTGT+GGG - chr2_4:5937555-5937574 None:intergenic 55.0%
CAGCTGCCGTTGAAAAGACC+TGG - chr2_4:5938140-5938159 None:intergenic 55.0%
GGACTTGTCCTTGGCAGACA+CGG - chr2_4:5938325-5938344 None:intergenic 55.0%
TCTGCCAAGGACAAGTCCAC+TGG + chr2_4:5938327-5938346 Msa0311070:CDS 55.0%
GAGCATGCAACTCGGCTTCT+TGG - chr2_4:5938419-5938438 None:intergenic 55.0%
GGAGAAGATACCTGCCGAAG+TGG + chr2_4:5938530-5938549 Msa0311070:CDS 55.0%
GATACCTGCCGAAGTGGCTA+AGG + chr2_4:5938536-5938555 Msa0311070:CDS 55.0%
AGTAGTGGTCCCTCATCTGG+TGG + chr2_4:5938687-5938706 Msa0311070:CDS 55.0%
CCCTCATCTGGTGGTTCTCA+AGG + chr2_4:5938696-5938715 Msa0311070:CDS 55.0%
!! CATATTCTGCCTCTGGAGCC+TGG - chr2_4:5938728-5938747 None:intergenic 55.0%
GCGTCCAGCTAGAAACCACT+AGG - chr2_4:5938772-5938791 None:intergenic 55.0%
GCGGCCATAGCGAGAAAACG+AGG - chr2_4:5934729-5934748 None:intergenic 60.0%
AGAGCGGAGCAAGGCAGTAG+CGG - chr2_4:5934751-5934770 None:intergenic 60.0%
GTTACAGCCTGACGCTTGGC+TGG - chr2_4:5936196-5936215 None:intergenic 60.0%
CCCATTGCAACTGCCTCGTC+AGG - chr2_4:5937215-5937234 None:intergenic 60.0%
TGCAATGGGAGCAGCACTCC+AGG + chr2_4:5937226-5937245 Msa0311070:CDS 60.0%
GCAATGGGAGCAGCACTCCA+GGG + chr2_4:5937227-5937246 Msa0311070:CDS 60.0%
CTCCAGGGTGGTATCCTACG+TGG + chr2_4:5937242-5937261 Msa0311070:CDS 60.0%
CTCCACGTAGGATACCACCC+TGG - chr2_4:5937247-5937266 None:intergenic 60.0%
GCGTAATGAGTGAGGGGGTG+TGG - chr2_4:5937556-5937575 None:intergenic 60.0%
! TACCTCTGGGAGCAGGAGGA+AGG - chr2_4:5938254-5938273 None:intergenic 60.0%
! TGAGGCATACCTCTGGGAGC+AGG - chr2_4:5938261-5938280 None:intergenic 60.0%
TGGTTCTCAAGGTGGGGACC+AGG + chr2_4:5938707-5938726 Msa0311070:CDS 60.0%
AGGCACACCAGCCAAGCGTC+AGG + chr2_4:5936186-5936205 Msa0311070:CDS 65.0%
ATGGGAGCAGCACTCCAGGG+TGG + chr2_4:5937230-5937249 Msa0311070:CDS 65.0%
! GGCATACCTCTGGGAGCAGG+AGG - chr2_4:5938258-5938277 None:intergenic 65.0%
GCGGAGCAAGGCAGTAGCGG+CGG - chr2_4:5934748-5934767 None:intergenic 70.0%
GCGTCGGAGAGAGCGGAGCA+AGG - chr2_4:5934760-5934779 None:intergenic 70.0%
! CGTCACGGCGTCGGAGAGAG+CGG - chr2_4:5934767-5934786 None:intergenic 70.0%
! GAGGGGGTGTGGGGTGTGGT+GGG - chr2_4:5937545-5937564 None:intergenic 70.0%
! TGAGGGGGTGTGGGGTGTGG+TGG - chr2_4:5937546-5937565 None:intergenic 70.0%
! GAGTGAGGGGGTGTGGGGTG+TGG - chr2_4:5937549-5937568 None:intergenic 70.0%
GGCCTTCCTCCTGCTCCCAG+AGG + chr2_4:5938249-5938268 Msa0311070:CDS 70.0%
AGGTGGGGACCAGGCTCCAG+AGG + chr2_4:5938716-5938735 Msa0311070:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 5934489 5939177 5934489 ID=Msa0311070;Name=Msa0311070
chr2_4 mRNA 5934489 5939177 5934489 ID=Msa0311070-mRNA-1;Parent=Msa0311070;Name=Msa0311070-mRNA-1;_AED=0.09;_eAED=0.09;_QI=252|1|1|1|1|1|6|413|677
chr2_4 exon 5934489 5934818 5934489 ID=Msa0311070-mRNA-1:exon:2238;Parent=Msa0311070-mRNA-1
chr2_4 exon 5935785 5935849 5935785 ID=Msa0311070-mRNA-1:exon:2239;Parent=Msa0311070-mRNA-1
chr2_4 exon 5935929 5936007 5935929 ID=Msa0311070-mRNA-1:exon:2240;Parent=Msa0311070-mRNA-1
chr2_4 exon 5936103 5936669 5936103 ID=Msa0311070-mRNA-1:exon:2241;Parent=Msa0311070-mRNA-1
chr2_4 exon 5936765 5937385 5936765 ID=Msa0311070-mRNA-1:exon:2242;Parent=Msa0311070-mRNA-1
chr2_4 exon 5938141 5939177 5938141 ID=Msa0311070-mRNA-1:exon:2243;Parent=Msa0311070-mRNA-1
chr2_4 five_prime_UTR 5934489 5934740 5934489 ID=Msa0311070-mRNA-1:five_prime_utr;Parent=Msa0311070-mRNA-1
chr2_4 CDS 5934741 5934818 5934741 ID=Msa0311070-mRNA-1:cds;Parent=Msa0311070-mRNA-1
chr2_4 CDS 5935785 5935849 5935785 ID=Msa0311070-mRNA-1:cds;Parent=Msa0311070-mRNA-1
chr2_4 CDS 5935929 5936007 5935929 ID=Msa0311070-mRNA-1:cds;Parent=Msa0311070-mRNA-1
chr2_4 CDS 5936103 5936669 5936103 ID=Msa0311070-mRNA-1:cds;Parent=Msa0311070-mRNA-1
chr2_4 CDS 5936765 5937385 5936765 ID=Msa0311070-mRNA-1:cds;Parent=Msa0311070-mRNA-1
chr2_4 CDS 5938141 5938764 5938141 ID=Msa0311070-mRNA-1:cds;Parent=Msa0311070-mRNA-1
chr2_4 three_prime_UTR 5938765 5939177 5938765 ID=Msa0311070-mRNA-1:three_prime_utr;Parent=Msa0311070-mRNA-1
Gene Sequence

>Msa0311070

ATGGCCGCCGCTACTGCCTTGCTCCGCTCTCTCCGACGCCGTGACGTTGCTTCTTCTTCCTTCTCCGCCTATCGTTCGTTGATAGGTAACACTAAGCCTGCACATGTAGGTCACAATTGGTCAAGTTTGTCTCGACCATTCAGTTCAAGGCCTGCTGGAAATGATGTTATTGGTATTGATTTAGGTACAACTAATTCATGTGTTTCTGTTATGGAAGGAAAGAATCCAAAAGTCATCGAGAATTCTGAAGGTGCACGAACTACACCATCTGTGGTTGCCTTCTCTCAGAAAGGGGAGCTGCTTGTAGGCACACCAGCCAAGCGTCAGGCTGTAACTAACCCAGTAAACACTATCTCTGGTGCCAAGCGCTTGATTGGTAGGCGATTTGAGGACGCTCAAACTCAAAAAGAGATGAAAATGGTTCCATACAAGATAGTTAAGGCTCCAAATGGAGATGCATGGGTTGAAGCTAATGGGCAGCAGTATTCACCTAGTCAGATTGGTGCCTTCGTTCTCACCAAAATGAAGGAAACTGCAGAAGCTTATCTTGGAAAGAGCGTTTCTAAAGCTGTTATTACTGTTCCAGCTTATTTCAATGATGCTCAAAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGAGGTGCTTAGAATCATCAATGAGCCCACTGCTGCTGCACTTTCATATGGGATGACAAACAAGGAAGGTCTCATTGCTGTTTTTGACCTTGGTGGTGGAACATTTGATGTTTCCATTTTAGAAATTTCTAATGGTGTTTTTGAGGTGAAAGCAACAAACGGTGACACTTTCTTGGGAGGAGAGGACTTCGACAATGCCTTGTTGGATTTTCTGGTGAATGAGTTCAAGAGGTCTGAGAGTATTGACCTTTCAAAGGATAAGCTTGCCTTGCAAAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAACTGTCTTCAACATCTCAGACAGAAATTAACTTGCCTTTCATCACTGCTGATGCATCTGGTGCAAAACATCTCAACATCACATTAACTAGATCCAAATTTGAGGCTCTAGTTAATAACTTGATCGAACGAACTAAGGCTCCATGTCAGAGCTGTTTGAAGGATGCAAATATTTCTACCAAGGACATTGACGAAGTTCTTCTTGTTGGAGGGATGACTCGTGTGCCAAAAGTCCAGGAGGTGGTTTCGTCAATTTTTGGCAAGTCTCCTTGTAAAGGAGTAAATCCTGACGAGGCAGTTGCAATGGGAGCAGCACTCCAGGGTGGTATCCTACGTGGAGATGTCAAAGAGCTCCTACTCTTGGATGTTACACCACTCTCTTTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGGTTAATCAACCGCAACACTACTATTCCTACAAAAAAGAGTCAGGTCTTTTCAACGGCAGCTGACAATCAAACACAAGTAGGAATCAAAGTGTTACAAGGTGAGCGGGAAATGGCTTCCGACAACAAAATGCTTGGAGAATTTGAGCTTGTTGGCCTTCCTCCTGCTCCCAGAGGTATGCCTCAGATTGAGGTCACCTTTGACATTGATGCCAACGGTATTGTTACCGTGTCTGCCAAGGACAAGTCCACTGGCAAAGAGCAGCAAATTACTATTAAGTCATCTGGTGGGCTTTCTGATGATGATATTCAAAAGATGGTCCAAGAAGCCGAGTTGCATGCTCAGAAAGACCAAGAAAGAAAGAGTCTGATCGATATTAGAAACTCTGCAGACACATCAATTTACAGCATTGAGAAAAGCCTAAGTGAATACAGGGAGAAGATACCTGCCGAAGTGGCTAAGGAAATCGAGGATGCTGTTTCTGATTTGAGAAGTGCGATGGATGGGGACAGTGCAGATGAAATCAAGTCGAAACTTGATGCTGCAAACAAGGCCGTCTCCAAGATTGGAGAGCACATGTCAGGTGGCTCTAGTAGTGGTCCCTCATCTGGTGGTTCTCAAGGTGGGGACCAGGCTCCAGAGGCAGAATATGAAGAGGTGAAGAAGTGA
Protein sequence

>Msa0311070

MAAATALLRSLRRRDVASSSFSAYRSLIGNTKPAHVGHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFSQKGELLVGTPAKRQAVTNPVNTISGAKRLIGRRFEDAQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALSYGMTNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRSESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNNLIERTKAPCQSCLKDANISTKDIDEVLLVGGMTRVPKVQEVVSSIFGKSPCKGVNPDEAVAMGAALQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFELVGLPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIKSSGGLSDDDIQKMVQEAELHAQKDQERKSLIDIRNSADTSIYSIEKSLSEYREKIPAEVAKEIEDAVSDLRSAMDGDSADEIKSKLDAANKAVSKIGEHMSGGSSSGPSSGGSQGGDQAPEAEYEEVKK*