Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313020 | KEH36560.1 | 93.056 | 720 | 33 | 6 | 178 | 892 | 184 | 891 | 0.0 | 1297 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313020 | sp|Q84VG7|FES1_ARATH | 30.902 | 521 | 260 | 21 | 441 | 891 | 96 | 586 | 2.17e-40 | 161 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0313020 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0075360 | Msa0313020 | 0.803900 | 2.795410e-49 | -8.615850e-47 |
Msa0159930 | Msa0313020 | 0.800606 | 1.331834e-48 | -8.615850e-47 |
Msa0192270 | Msa0313020 | 0.891524 | 3.671472e-74 | -8.615850e-47 |
Msa0204770 | Msa0313020 | 0.859276 | 4.626687e-63 | -8.615850e-47 |
Msa0219590 | Msa0313020 | 0.810340 | 1.210399e-50 | -8.615850e-47 |
Msa0260780 | Msa0313020 | 0.805523 | 1.280908e-49 | -8.615850e-47 |
Msa0267920 | Msa0313020 | 0.826367 | 2.821074e-54 | -8.615850e-47 |
Msa0272770 | Msa0313020 | 0.926862 | 2.613697e-91 | -8.615850e-47 |
Msa0313020 | Msa0328390 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
Msa0313020 | Msa0376630 | 0.823714 | 1.193774e-53 | -8.615850e-47 |
Msa0313020 | Msa0411160 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
Msa0313020 | Msa0411190 | 0.812306 | 4.531289e-51 | -8.615850e-47 |
Msa0313020 | Msa0425170 | 0.803688 | 3.094095e-49 | -8.615850e-47 |
Msa0313020 | Msa0468270 | 0.813304 | 2.738558e-51 | -8.615850e-47 |
Msa0313020 | Msa0471670 | 0.827027 | 1.961904e-54 | -8.615850e-47 |
Msa0313020 | Msa0479170 | 0.804326 | 2.279713e-49 | -8.615850e-47 |
Msa0313020 | Msa0566310 | 0.822326 | 2.515153e-53 | -8.615850e-47 |
Msa0313020 | Msa0574390 | 0.809365 | 1.961835e-50 | -8.615850e-47 |
Msa0313020 | Msa0662340 | 0.807812 | 4.210571e-50 | -8.615850e-47 |
Msa0313020 | Msa0689250 | 0.807255 | 5.526300e-50 | -8.615850e-47 |
Msa0313020 | Msa0699280 | 0.817647 | 2.959006e-52 | -8.615850e-47 |
Msa0313020 | Msa0744000 | 0.822833 | 1.916659e-53 | -8.615850e-47 |
Msa0313020 | Msa0864300 | 0.815326 | 9.791148e-52 | -8.615850e-47 |
Msa0313020 | Msa0906690 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
Msa0313020 | Msa0935820 | 0.810161 | 1.322643e-50 | -8.615850e-47 |
Msa0313020 | Msa0945630 | 0.820898 | 5.378374e-53 | -8.615850e-47 |
Msa0313020 | Msa0964310 | 0.809215 | 2.112681e-50 | -8.615850e-47 |
Msa0313020 | Msa1004840 | 0.829245 | 5.732949e-55 | -8.615850e-47 |
Msa0313020 | Msa1035960 | 0.817885 | 2.614075e-52 | -8.615850e-47 |
Msa0313020 | Msa1173340 | 0.800206 | 1.606744e-48 | -8.615850e-47 |
Msa0313020 | Msa1203100 | 0.825778 | 3.893467e-54 | -8.615850e-47 |
Msa0313020 | Msa1205370 | 0.802040 | 6.774402e-49 | -8.615850e-47 |
Msa0313020 | Msa1250290 | 0.812888 | 3.380393e-51 | -8.615850e-47 |
Msa0313020 | Msa1295910 | 0.829486 | 5.011447e-55 | -8.615850e-47 |
Msa0313020 | Msa1313280 | 0.802423 | 5.650984e-49 | -8.615850e-47 |
Msa0313020 | Msa1328260 | 0.802798 | 4.728381e-49 | -8.615850e-47 |
Msa0313020 | Msa1435890 | 0.822122 | 2.804792e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313020 | MtrunA17_Chr2g0282581 | 93.194 | 720 | 33 | 6 | 178 | 892 | 183 | 891 | 0.0 | 1294 |
Msa0313020 | MtrunA17_Chr3g0129941 | 45.455 | 88 | 48 | 0 | 801 | 888 | 879 | 966 | 3.66e-16 | 83.6 |
Msa0313020 | MtrunA17_Chr2g0308451 | 40.698 | 86 | 51 | 0 | 806 | 891 | 1362 | 1447 | 5.23e-15 | 80.1 |
Msa0313020 | MtrunA17_Chr8g0384131 | 40.964 | 83 | 49 | 0 | 806 | 888 | 693 | 775 | 2.28e-14 | 77.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313020 | AT2G33835.1 | 30.902 | 521 | 260 | 21 | 441 | 891 | 96 | 586 | 2.20e-41 | 161 |
Msa0313020 | AT3G26850.2 | 42.353 | 85 | 49 | 0 | 808 | 892 | 181 | 265 | 8.19e-17 | 82.0 |
Msa0313020 | AT3G26850.1 | 42.353 | 85 | 49 | 0 | 808 | 892 | 181 | 265 | 8.19e-17 | 82.0 |
Msa0313020 | AT3G18640.3 | 44.578 | 83 | 46 | 0 | 806 | 888 | 590 | 672 | 2.71e-16 | 84.0 |
Msa0313020 | AT3G18640.1 | 44.578 | 83 | 46 | 0 | 806 | 888 | 590 | 672 | 2.71e-16 | 84.0 |
Msa0313020 | AT3G18640.2 | 44.578 | 83 | 46 | 0 | 806 | 888 | 590 | 672 | 2.71e-16 | 84.0 |
Msa0313020 | AT2G10553.1 | 42.683 | 82 | 47 | 0 | 811 | 892 | 1 | 82 | 1.04e-14 | 70.5 |
Find 203 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTGAAAACCCGTTCTAAT+TGG | 0.146947 | 2_4:+8303479 | Msa0313020:CDS |
GTTACTTGTTTAGCAATATT+TGG | 0.193189 | 2_4:+8304660 | Msa0313020:three_prime_UTR |
AGAGACCCATCTCCAATATT+TGG | 0.208217 | 2_4:-8303601 | None:intergenic |
AACGTTGATGTTGAATATTC+TGG | 0.211774 | 2_4:+8302306 | Msa0313020:CDS |
AAGAGTTGCTAAAACCATTT+TGG | 0.214650 | 2_4:+8304097 | Msa0313020:CDS |
CTGAAGAGAAAGAGGATTTA+TGG | 0.227339 | 2_4:-8303396 | None:intergenic |
TCTACCGAAGAATCTGAATT+TGG | 0.230409 | 2_4:-8298188 | None:intergenic |
CTTGAATTGCATGGTTTATA+AGG | 0.231183 | 2_4:+8304607 | Msa0313020:three_prime_UTR |
TAATGTGATGGCCGTACTTC+AGG | 0.259079 | 2_4:-8302120 | None:intergenic |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.262685 | 2_4:+8298475 | Msa0313020:CDS |
CCACACCTATGTCACCATTT+TGG | 0.265214 | 2_4:-8303855 | None:intergenic |
TTTCAAAGTCAAGGTTGATT+TGG | 0.276666 | 2_4:+8304503 | Msa0313020:three_prime_UTR |
ACCTTTAGGTGCAAGTGCTT+TGG | 0.308934 | 2_4:+8303363 | Msa0313020:CDS |
TATCTTCAGTGGTCGGAATT+TGG | 0.312793 | 2_4:-8304203 | None:intergenic |
AGAGAATTGGAATTGGAAAA+AGG | 0.326337 | 2_4:+8302925 | Msa0313020:CDS |
GGAAGAAGAGGAGGAGGAGG+AGG | 0.326894 | 2_4:+8299508 | Msa0313020:CDS |
TCCTGATGTTATCTCTGCTT+TGG | 0.335129 | 2_4:-8303818 | None:intergenic |
TCTGCATCGGGCAGAGAATC+TGG | 0.335633 | 2_4:-8300897 | None:intergenic |
AGTACGGCCATCACATTATA+TGG | 0.337928 | 2_4:+8302125 | Msa0313020:CDS |
AGAAGAGGAAGAAGAAGATC+AGG | 0.346185 | 2_4:+8298268 | Msa0313020:CDS |
TCAGGAAGAAGAAGAGGAAA+TGG | 0.351275 | 2_4:+8298286 | Msa0313020:CDS |
TTAAATGCAGATTTATTCTC+TGG | 0.353007 | 2_4:-8303220 | None:intergenic |
AAAGCTTCCCTTCTAATTAG+AGG | 0.355973 | 2_4:+8303625 | Msa0313020:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.358190 | 2_4:+8298472 | Msa0313020:CDS |
AATTAGAGGGTCATCCGTTC+AGG | 0.358517 | 2_4:+8303639 | Msa0313020:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 2_4:+8298469 | Msa0313020:CDS |
CTTTCAACCCCTGCTAGTAT+TGG | 0.367586 | 2_4:+8304688 | Msa0313020:three_prime_UTR |
TGTTCCATTCTGAAGTAAAC+TGG | 0.367677 | 2_4:+8304584 | Msa0313020:three_prime_UTR |
AGACGACCCTCATGCCAAAA+TGG | 0.368470 | 2_4:-8304111 | None:intergenic |
AGAAGAAGAGGAGGAGGAAG+AGG | 0.369873 | 2_4:+8298463 | Msa0313020:CDS |
ATGCCTTTGGTGTTGAAGAT+AGG | 0.370980 | 2_4:+8303884 | Msa0313020:CDS |
AGCAGTGGAGGAGGAGGAGG+AGG | 0.372563 | 2_4:+8298391 | Msa0313020:CDS |
AGCATTGAGATACCAAATAT+TGG | 0.373167 | 2_4:+8303589 | Msa0313020:CDS |
GGATAATAAATTTCATGAAA+TGG | 0.373961 | 2_4:+8303990 | Msa0313020:CDS |
TTTCAACCCCTGCTAGTATT+GGG | 0.376372 | 2_4:+8304689 | Msa0313020:three_prime_UTR |
TGGCCGTACTTCAGGGTTCT+CGG | 0.379969 | 2_4:-8302112 | None:intergenic |
AGCTTCTTTATCTGATGTTA+AGG | 0.382480 | 2_4:+8302383 | Msa0313020:CDS |
ACGGGAAAAGATGTGGTTAC+TGG | 0.386220 | 2_4:+8302429 | Msa0313020:CDS |
AGACGGAAGTTGTCATGAAT+TGG | 0.388494 | 2_4:-8304469 | None:intergenic |
AGAGGAAGAAGAGGAGGAGG+AGG | 0.389090 | 2_4:+8299505 | Msa0313020:CDS |
GGAGGAAGAAGAAGAGGAAG+AGG | 0.390224 | 2_4:+8299529 | Msa0313020:CDS |
TCAGAAGAGAGAATTGGAAT+TGG | 0.391834 | 2_4:+8302918 | Msa0313020:CDS |
AATATTCAACATCAACGTTT+AGG | 0.392579 | 2_4:-8302302 | None:intergenic |
AGAAGAAGAGGAAGAGGAAG+AGG | 0.394447 | 2_4:+8299535 | Msa0313020:CDS |
CGAGGAACAGAACTTCTGTT+TGG | 0.394825 | 2_4:-8303775 | None:intergenic |
CGGATGACCCTCTAATTAGA+AGG | 0.396020 | 2_4:-8303633 | None:intergenic |
GAAGCTTTGCTATTGCAATC+TGG | 0.406483 | 2_4:-8302366 | None:intergenic |
TGAAGAGAAAGAGGATTTAT+GGG | 0.410865 | 2_4:-8303395 | None:intergenic |
AAGAGGGTCATAAAGATCTC+TGG | 0.414544 | 2_4:-8303560 | None:intergenic |
ACTGAAAACCCGTTCTAATT+GGG | 0.418464 | 2_4:+8303480 | Msa0313020:CDS |
AGTTGTGCAAACTACCAAAA+TGG | 0.421565 | 2_4:+8303841 | Msa0313020:CDS |
AGAGACAGTAGAGGTGGAAA+AGG | 0.421723 | 2_4:+8300779 | Msa0313020:intron |
CGAAGAAGAGATGGAGGATG+AGG | 0.426234 | 2_4:+8299562 | Msa0313020:CDS |
CTACCATGACCAGACCTTGA+TGG | 0.426349 | 2_4:-8302558 | None:intergenic |
GGAAGAGGAAGAAGAGGAGG+AGG | 0.431954 | 2_4:+8299502 | Msa0313020:CDS |
TTTCCCTGTAACAGGTGTTA+AGG | 0.435675 | 2_4:+8303015 | Msa0313020:intron |
AACTTGATTTCTGCTGAAGA+TGG | 0.439277 | 2_4:+8302267 | Msa0313020:CDS |
TGTAGATTCAAGCCAACATA+TGG | 0.439592 | 2_4:+8302044 | Msa0313020:intron |
TCCATCTTTAATCTCAGCAC+TGG | 0.439675 | 2_4:-8302758 | None:intergenic |
AGGGTTGCACCACATGCTAA+TGG | 0.439793 | 2_4:+8303451 | Msa0313020:CDS |
GACAGTAGAGGTGGAAAAGG+AGG | 0.442579 | 2_4:+8300782 | Msa0313020:CDS |
TGCACATCAGAAGAGAGAAT+TGG | 0.443524 | 2_4:+8302912 | Msa0313020:CDS |
ATCCTCTTTCTCTTCAGATC+GGG | 0.443545 | 2_4:+8303402 | Msa0313020:CDS |
AGATGAAGAGGAAGAGGAAG+AGG | 0.443963 | 2_4:+8298349 | Msa0313020:CDS |
AGCAATATGTTTCTTTATGT+CGG | 0.448405 | 2_4:+8304232 | Msa0313020:CDS |
GGAGGAGGAGGAAGAAGAAG+AGG | 0.449096 | 2_4:+8299523 | Msa0313020:CDS |
TGAACAAGAAGAAGAGGAGG+AGG | 0.449416 | 2_4:+8298316 | Msa0313020:CDS |
TTCATCTAGTTGGTTCATCT+AGG | 0.451325 | 2_4:+8303431 | Msa0313020:CDS |
TCATCTAGTTGGTTCATCTA+GGG | 0.454338 | 2_4:+8303432 | Msa0313020:CDS |
TGAAGAAGTAGAAGTAGAAG+AGG | 0.455443 | 2_4:+8298253 | Msa0313020:CDS |
TGATTGCATAACTTTCTCCT+TGG | 0.455572 | 2_4:-8302502 | None:intergenic |
TCATGAGATGGATGCCAACT+TGG | 0.456645 | 2_4:-8303163 | None:intergenic |
GCTAGTATTGGGCAGCAACT+TGG | 0.456742 | 2_4:+8304700 | Msa0313020:three_prime_UTR |
AGTTGAAGATGAAGAGGAAG+AGG | 0.457272 | 2_4:+8298343 | Msa0313020:CDS |
AAAGGTGGAAGAGGAAGAAG+AGG | 0.457510 | 2_4:+8299496 | Msa0313020:CDS |
TTGCTACGTTTATCTGCATC+GGG | 0.457556 | 2_4:-8300909 | None:intergenic |
CAAGCCAGTTTACTTCAGAA+TGG | 0.458118 | 2_4:-8304588 | None:intergenic |
GGCCGTACTTCAGGGTTCTC+GGG | 0.459568 | 2_4:-8302111 | None:intergenic |
AGAGGAAGACGAAGAAGAGA+TGG | 0.459731 | 2_4:+8299553 | Msa0313020:CDS |
AGTAGCAGTGGAGGAGGAGG+AGG | 0.459867 | 2_4:+8298388 | Msa0313020:CDS |
TTGCTATGTTTATCCGCATC+GGG | 0.462152 | 2_4:-8299650 | None:intergenic |
AGAAGGTTCCCAATTAGAAC+GGG | 0.465289 | 2_4:-8303488 | None:intergenic |
AATGCCAAATTCAGATTCTT+CGG | 0.475047 | 2_4:+8298184 | None:intergenic |
CACCAAGTCATCTAGTGATA+CGG | 0.475093 | 2_4:+8302410 | Msa0313020:CDS |
TGATGTGAAAGAGGAGAACT+TGG | 0.477135 | 2_4:+8302071 | Msa0313020:CDS |
CCCAGTGCTGAGATTAAAGA+TGG | 0.477210 | 2_4:+8302757 | Msa0313020:CDS |
AGAAGAGGAGGAGGAAGAGG+AGG | 0.479774 | 2_4:+8298466 | Msa0313020:CDS |
CTCTGCACGGGATGAATATG+AGG | 0.483485 | 2_4:-8303275 | None:intergenic |
TTTGCTACGTTTATCTGCAT+CGG | 0.483721 | 2_4:-8300910 | None:intergenic |
AACAGTAGTAGCAGTGGAGG+AGG | 0.484846 | 2_4:+8298382 | Msa0313020:CDS |
GAGATACCAAATATTGGAGA+TGG | 0.486987 | 2_4:+8303595 | Msa0313020:CDS |
AGAAGATCAGGAAGAAGAAG+AGG | 0.489830 | 2_4:+8298280 | Msa0313020:CDS |
ACTTGATTTCTGCTGAAGAT+GGG | 0.490752 | 2_4:+8302268 | Msa0313020:CDS |
AATGTGATGGCCGTACTTCA+GGG | 0.491889 | 2_4:-8302119 | None:intergenic |
TGGTTCACTGCATCCTTCAG+TGG | 0.492124 | 2_4:-8302346 | None:intergenic |
AGTAGTAGCAGTGGAGGAGG+AGG | 0.494508 | 2_4:+8298385 | Msa0313020:CDS |
AGAAACAATAAAGGTGGAAG+AGG | 0.494566 | 2_4:+8299487 | Msa0313020:CDS |
TTCCCGATCTGAAGAGAAAG+AGG | 0.494946 | 2_4:-8303404 | None:intergenic |
TCATCATCATCTTGAAGTGA+TGG | 0.499072 | 2_4:-8298218 | None:intergenic |
GGAAGACGAAGAAGAGATGG+AGG | 0.501523 | 2_4:+8299556 | Msa0313020:CDS |
TCCCGTATCACTAGATGACT+TGG | 0.504697 | 2_4:-8302412 | None:intergenic |
CCATCTTTAATCTCAGCACT+GGG | 0.507231 | 2_4:-8302757 | None:intergenic |
GGAAGAAGTTGAAGATGAAG+AGG | 0.509317 | 2_4:+8298337 | Msa0313020:CDS |
TATATCCTCTGTACATATGT+TGG | 0.511338 | 2_4:-8303318 | None:intergenic |
TGAAGAGGAAGAGGAAGAGG+AGG | 0.511492 | 2_4:+8298352 | Msa0313020:CDS |
AGAGGGTCATAAAGATCTCT+GGG | 0.511884 | 2_4:-8303559 | None:intergenic |
AGAAGTTGAACAAGAAGAAG+AGG | 0.511986 | 2_4:+8298310 | Msa0313020:CDS |
AGTTGCTGCCCAATACTAGC+AGG | 0.512817 | 2_4:-8304697 | None:intergenic |
GGCTATCTGTTTCAAAGTCA+AGG | 0.513697 | 2_4:+8304494 | Msa0313020:three_prime_UTR |
GGGCAGCAACTTGGAAAGAC+TGG | 0.513753 | 2_4:+8304709 | Msa0313020:three_prime_UTR |
TCCAAAGCACTTGCACCTAA+AGG | 0.515626 | 2_4:-8303364 | None:intergenic |
AATCCTCTTTCTCTTCAGAT+CGG | 0.517995 | 2_4:+8303401 | Msa0313020:CDS |
GAAAGTTATGCAATCAGAGA+TGG | 0.522327 | 2_4:+8302509 | Msa0313020:CDS |
TCCTCAACAAAATTATCTCT+CGG | 0.531272 | 2_4:-8302459 | None:intergenic |
TCACATCAAGCTCCATATGT+TGG | 0.531391 | 2_4:-8302056 | None:intergenic |
ATGTGAAACAAAAGCCATCA+AGG | 0.533118 | 2_4:+8302544 | Msa0313020:CDS |
ACCAAGTCATCTAGTGATAC+GGG | 0.535354 | 2_4:+8302411 | Msa0313020:CDS |
AGTTGAACAAGAAGAAGAGG+AGG | 0.536993 | 2_4:+8298313 | Msa0313020:CDS |
TTTGCTATGTTTATCCGCAT+CGG | 0.537493 | 2_4:-8299651 | None:intergenic |
ACCAAAGCAGAGATAACATC+AGG | 0.539299 | 2_4:+8303817 | Msa0313020:CDS |
TTCAAATTCTCTTCCCGATG+CGG | 0.540154 | 2_4:+8299637 | Msa0313020:CDS |
TATGGAGCTTGATGTGAAAG+AGG | 0.541245 | 2_4:+8302062 | Msa0313020:CDS |
TGCCCGAGAACCCTGAAGTA+CGG | 0.541918 | 2_4:+8302109 | Msa0313020:CDS |
GGTGGAAGAGGAAGAAGAGG+AGG | 0.543397 | 2_4:+8299499 | Msa0313020:CDS |
AGCAATCATTTCCTCTGCAC+GGG | 0.546220 | 2_4:-8303287 | None:intergenic |
AGAACAAGAAACAGTTGTAG+AGG | 0.548644 | 2_4:+8300848 | Msa0313020:CDS |
GGAAACAAGCTGTCCCTCAT+CGG | 0.553716 | 2_4:-8303199 | None:intergenic |
TATGATGATTCTGCTGCAGT+TGG | 0.555386 | 2_4:+8303682 | Msa0313020:CDS |
AAGCTTCCCTTCTAATTAGA+GGG | 0.556317 | 2_4:+8303626 | Msa0313020:CDS |
TTCTCTTCCATATAATGTGA+TGG | 0.556995 | 2_4:-8302132 | None:intergenic |
CGTATCACTAGATGACTTGG+TGG | 0.557776 | 2_4:-8302409 | None:intergenic |
TAGCAATCATTTCCTCTGCA+CGG | 0.558599 | 2_4:-8303288 | None:intergenic |
GGTGTGGGACAATATGCCTT+TGG | 0.558890 | 2_4:+8303871 | Msa0313020:CDS |
GAGGTTGACTTTCAGACAGA+TGG | 0.560149 | 2_4:+8304012 | Msa0313020:CDS |
TAATAAATTTCATGAAATGG+AGG | 0.564842 | 2_4:+8303993 | Msa0313020:CDS |
AGTAGAAACAGTAGTAGCAG+TGG | 0.565045 | 2_4:+8298376 | Msa0313020:CDS |
CAGAAGGTTCCCAATTAGAA+CGG | 0.565372 | 2_4:-8303489 | None:intergenic |
AGTAGAGGTGGAAAAGGAGG+AGG | 0.568285 | 2_4:+8300785 | Msa0313020:CDS |
AGATGCTTTACTCATGCTCA+TGG | 0.570346 | 2_4:-8302160 | None:intergenic |
CTCATATTCATCCCGTGCAG+AGG | 0.570912 | 2_4:+8303276 | Msa0313020:CDS |
AGCAATAGACATGGAAGTGG+AGG | 0.572253 | 2_4:+8300824 | Msa0313020:CDS |
AAAAGAGAAGTTTCCGATGA+GGG | 0.572557 | 2_4:+8303186 | Msa0313020:CDS |
GATGGTCGAAATGGAACAGA+AGG | 0.573242 | 2_4:-8303505 | None:intergenic |
TAGTGTGAATAATACTGACC+AGG | 0.573605 | 2_4:+8302867 | Msa0313020:CDS |
AGAAGCAATAGACATGGAAG+TGG | 0.577567 | 2_4:+8300821 | Msa0313020:CDS |
AACTACCAAAATGGTGACAT+AGG | 0.578382 | 2_4:+8303850 | Msa0313020:CDS |
TATCCTATCTTCAACACCAA+AGG | 0.584215 | 2_4:-8303887 | None:intergenic |
CAGGGATATGTCAATAAACA+TGG | 0.586684 | 2_4:+8304387 | Msa0313020:intron |
AATGTCAATTCCTCATGCAA+CGG | 0.586889 | 2_4:-8302186 | None:intergenic |
AGAAACAGTAGTAGCAGTGG+AGG | 0.587172 | 2_4:+8298379 | Msa0313020:CDS |
AATATTCTGGACATCTTCAG+AGG | 0.588957 | 2_4:+8302319 | Msa0313020:CDS |
CAAGATCAACAAGGACTGCA+TGG | 0.589786 | 2_4:-8304071 | None:intergenic |
TGCAATCAGAGATGGAGTCA+AGG | 0.591805 | 2_4:+8302517 | Msa0313020:CDS |
AGATACCAAATATTGGAGAT+GGG | 0.592018 | 2_4:+8303596 | Msa0313020:CDS |
GCAATCAGAGATGGAGTCAA+GGG | 0.592070 | 2_4:+8302518 | Msa0313020:CDS |
GTGTTAAGGAAAATGTTGAC+AGG | 0.595611 | 2_4:+8303029 | Msa0313020:CDS |
GTAAACTGGCTTGAATTGCA+TGG | 0.597041 | 2_4:+8304598 | Msa0313020:three_prime_UTR |
AGCAACTTGGAAAGACTGGT+AGG | 0.598173 | 2_4:+8304713 | Msa0313020:three_prime_UTR |
TTCATGACAACTTCCGTCTG+AGG | 0.598992 | 2_4:+8304473 | Msa0313020:three_prime_UTR |
ATGATGATTCTGCTGCAGTT+GGG | 0.600513 | 2_4:+8303683 | Msa0313020:CDS |
TGGAAGAAGCAAGTCCAAGT+TGG | 0.600753 | 2_4:+8303149 | Msa0313020:CDS |
AGTGTGAATAATACTGACCA+GGG | 0.602883 | 2_4:+8302868 | Msa0313020:CDS |
CCAAAATGGTGACATAGGTG+TGG | 0.606094 | 2_4:+8303855 | Msa0313020:CDS |
TTAGCAGTATCTTCAGTGGT+CGG | 0.606678 | 2_4:-8304210 | None:intergenic |
TTTGGCATTTACAGCCTCTG+AGG | 0.609481 | 2_4:-8299032 | None:intergenic |
GAAAGATAAATACAATGATG+AGG | 0.609702 | 2_4:+8299613 | Msa0313020:CDS |
AACTTGTGATGAAGCCTGAA+CGG | 0.612804 | 2_4:-8303653 | None:intergenic |
AACGGACTGAGCATGATGCT+AGG | 0.615927 | 2_4:+8303923 | Msa0313020:CDS |
ACAGAGAGTGAACATATCAA+AGG | 0.616234 | 2_4:+8298515 | Msa0313020:CDS |
GTTGCTGCCCAATACTAGCA+GGG | 0.617855 | 2_4:-8304696 | None:intergenic |
CTTCAGAGGAAAACCACTGA+AGG | 0.618372 | 2_4:+8302333 | Msa0313020:CDS |
GGATGACCCTCTAATTAGAA+GGG | 0.619254 | 2_4:-8303632 | None:intergenic |
AAATGTTGACAGGTCAAGAA+CGG | 0.621080 | 2_4:+8303039 | Msa0313020:CDS |
GATGTGAAAGAGGAGAACTT+GGG | 0.624477 | 2_4:+8302072 | Msa0313020:CDS |
GCAACTTGGAAAGACTGGTA+GGG | 0.626594 | 2_4:+8304714 | Msa0313020:three_prime_UTR |
GCTAAAGGTTGGTGCATCCG+AGG | 0.627168 | 2_4:+8302814 | Msa0313020:CDS |
AGCATCTGTTCCGTTGCATG+AGG | 0.628622 | 2_4:+8302176 | Msa0313020:CDS |
TAGTGATACGGGAAAAGATG+TGG | 0.628779 | 2_4:+8302422 | Msa0313020:CDS |
ATCTCAATGCTATCACGAAG+AGG | 0.632520 | 2_4:-8303577 | None:intergenic |
AGTGTATATCCATTAGCATG+TGG | 0.634510 | 2_4:-8303460 | None:intergenic |
GAATGGAACAAGAGAAAATG+CGG | 0.634955 | 2_4:-8304571 | None:intergenic |
TTGCTTAGCAGTATCTTCAG+TGG | 0.635718 | 2_4:-8304214 | None:intergenic |
AAACGAAGAAGCAATAGACA+TGG | 0.638605 | 2_4:+8300815 | Msa0313020:CDS |
GATGCAGATAAACGTAGCAA+AGG | 0.640040 | 2_4:+8300912 | Msa0313020:CDS |
TTGCTGCCCAATACTAGCAG+GGG | 0.641067 | 2_4:-8304695 | None:intergenic |
TCTCAATGCTATCACGAAGA+GGG | 0.642743 | 2_4:-8303576 | None:intergenic |
GCATGAGGGTCGTCTCAGCA+AGG | 0.648486 | 2_4:+8304119 | Msa0313020:CDS |
TCAGTGGTCGGAATTTGGCG+TGG | 0.649706 | 2_4:-8304198 | None:intergenic |
GGAAGCTACAAGAACTACCT+CGG | 0.649982 | 2_4:-8302831 | None:intergenic |
ATGTGAAAGAGGAGAACTTG+GGG | 0.650828 | 2_4:+8302073 | Msa0313020:CDS |
CAAAATGGTGACATAGGTGT+GGG | 0.653939 | 2_4:+8303856 | Msa0313020:CDS |
TTTGTTGAGGATGCTGATGG+TGG | 0.658081 | 2_4:+8302471 | Msa0313020:CDS |
GATGCGGATAAACATAGCAA+AGG | 0.661684 | 2_4:+8299653 | Msa0313020:CDS |
TGATGGTGGTCAGAACTCCA+AGG | 0.667489 | 2_4:+8302485 | Msa0313020:CDS |
TTGAAACAGATAGCCTCAGA+CGG | 0.676400 | 2_4:-8304486 | None:intergenic |
AACAGAAGTTCTGTTCCTCG+CGG | 0.678826 | 2_4:+8303778 | Msa0313020:CDS |
CGAAACCAACATATGTACAG+AGG | 0.688687 | 2_4:+8303313 | Msa0313020:CDS |
GTGTGAATAATACTGACCAG+GGG | 0.693529 | 2_4:+8302869 | Msa0313020:CDS |
AGGGTCATAAAGATCTCTGG+GGG | 0.694830 | 2_4:-8303557 | None:intergenic |
CTGAATTCGAAGAACCTCAG+AGG | 0.698347 | 2_4:+8299018 | Msa0313020:CDS |
TGTGAATAATACTGACCAGG+GGG | 0.709375 | 2_4:+8302870 | Msa0313020:CDS |
ACTCTTTCACAAGATCAACA+AGG | 0.723096 | 2_4:-8304080 | None:intergenic |
GAGGGTCATAAAGATCTCTG+GGG | 0.728908 | 2_4:-8303558 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATAAACTATAAAAATAT+TGG | - | chr2_4:8301929-8301948 | None:intergenic | 10.0% |
!!! | TATTTTTGTAGAAACAATAA+AGG | + | chr2_4:8299478-8299497 | Msa0313020:CDS | 15.0% |
!! | CTAATAATTCATTAATGAAT+TGG | - | chr2_4:8300942-8300961 | None:intergenic | 15.0% |
!!! | ATTTTCATAAAACTTATGAT+GGG | - | chr2_4:8303752-8303771 | None:intergenic | 15.0% |
!! | AGAATTGGATTAAATCAATA+TGG | - | chr2_4:8298571-8298590 | None:intergenic | 20.0% |
!!! | TAATGGTATTGAATATTGAT+AGG | + | chr2_4:8298704-8298723 | Msa0313020:intron | 20.0% |
!! | TTGAATTTGCCTAATTTAAA+GGG | - | chr2_4:8299912-8299931 | None:intergenic | 20.0% |
!! | ACATCATAATTCAAAAAAGA+TGG | - | chr2_4:8300725-8300744 | None:intergenic | 20.0% |
!!! | TCTTTTTTGAATTATGATGT+TGG | + | chr2_4:8300725-8300744 | Msa0313020:intron | 20.0% |
!! | AATACTATGAACAAATAAAG+GGG | - | chr2_4:8301096-8301115 | None:intergenic | 20.0% |
!! | CAATACTATGAACAAATAAA+GGG | - | chr2_4:8301097-8301116 | None:intergenic | 20.0% |
!! | TCAATACTATGAACAAATAA+AGG | - | chr2_4:8301098-8301117 | None:intergenic | 20.0% |
!!! | TCATAGTATTGAATATTGAT+AGG | + | chr2_4:8301106-8301125 | Msa0313020:intron | 20.0% |
!! | TCAAAATTACTAAACATTGA+GGG | - | chr2_4:8301565-8301584 | None:intergenic | 20.0% |
!! | TTCAAAATTACTAAACATTG+AGG | - | chr2_4:8301566-8301585 | None:intergenic | 20.0% |
!! | ACATCACAATTAAAAAATGA+TGG | - | chr2_4:8301681-8301700 | None:intergenic | 20.0% |
!!! | TCATTTTTTAATTGTGATGT+TGG | + | chr2_4:8301681-8301700 | Msa0313020:intron | 20.0% |
!! | TATGAAATGATTTAAAGAAG+AGG | + | chr2_4:8301981-8302000 | Msa0313020:intron | 20.0% |
!!! | ATGCAGTGTAAATTAAATTT+TGG | - | chr2_4:8302619-8302638 | None:intergenic | 20.0% |
!!! | GGTATATCAAATAATTTGTT+TGG | + | chr2_4:8302946-8302965 | Msa0313020:intron | 20.0% |
!! | TTATTAGAAATATGCACAAA+GGG | - | chr2_4:8302990-8303009 | None:intergenic | 20.0% |
!! | TTTATTAGAAATATGCACAA+AGG | - | chr2_4:8302991-8303010 | None:intergenic | 20.0% |
!!! | TTTGTGCATATTTCTAATAA+AGG | + | chr2_4:8302990-8303009 | Msa0313020:intron | 20.0% |
!! | ATTCATAGAAGTGATAAAAA+AGG | - | chr2_4:8303530-8303549 | None:intergenic | 20.0% |
!!! | CATTTTCATAAAACTTATGA+TGG | - | chr2_4:8303753-8303772 | None:intergenic | 20.0% |
!! | GGATAATAAATTTCATGAAA+TGG | + | chr2_4:8303990-8304009 | Msa0313020:CDS | 20.0% |
!! | TAATAAATTTCATGAAATGG+AGG | + | chr2_4:8303993-8304012 | Msa0313020:CDS | 20.0% |
! | CCAGATTACGAAATTTATTA+AGG | - | chr2_4:8298608-8298627 | None:intergenic | 25.0% |
! | CCTTAATAAATTTCGTAATC+TGG | + | chr2_4:8298605-8298624 | Msa0313020:intron | 25.0% |
! | ATTAACTTTGCGAAATGATT+AGG | + | chr2_4:8298765-8298784 | Msa0313020:intron | 25.0% |
! | AAGTTATAGACTAGAAAACA+CGG | + | chr2_4:8299172-8299191 | Msa0313020:intron | 25.0% |
! | TCAAAATTACTAACGATTGA+AGG | - | chr2_4:8299321-8299340 | None:intergenic | 25.0% |
!!! | TCATTTTTCAATTGTGATGT+TGG | + | chr2_4:8299433-8299452 | Msa0313020:intron | 25.0% |
!! | TTTTGTAGAAACAATAAAGG+TGG | + | chr2_4:8299481-8299500 | Msa0313020:CDS | 25.0% |
! | ACAAGAAAAAATAGTAGTAG+AGG | + | chr2_4:8299589-8299608 | Msa0313020:CDS | 25.0% |
! | GAAAGATAAATACAATGATG+AGG | + | chr2_4:8299613-8299632 | Msa0313020:CDS | 25.0% |
! | CAAAAAACAGTATCAAAACT+AGG | - | chr2_4:8299771-8299790 | None:intergenic | 25.0% |
! | GTTGAATTTGCCTAATTTAA+AGG | - | chr2_4:8299913-8299932 | None:intergenic | 25.0% |
!!! | AAAGAGTAGTTTTTTAGAGA+AGG | + | chr2_4:8300108-8300127 | Msa0313020:intron | 25.0% |
! | GAAAGATAAAGAGAAAAATG+AGG | + | chr2_4:8300872-8300891 | Msa0313020:CDS | 25.0% |
! | CATTTATTATGAGAACTATG+TGG | - | chr2_4:8301396-8301415 | None:intergenic | 25.0% |
! | AAAATCATAAAGCACAAGAT+AGG | - | chr2_4:8301656-8301675 | None:intergenic | 25.0% |
! | CTTCGTAATAAAGTAAATCA+CGG | - | chr2_4:8301726-8301745 | None:intergenic | 25.0% |
!! | GACTTCACTCATAAATTTTT+GGG | - | chr2_4:8301847-8301866 | None:intergenic | 25.0% |
!! | AGACTTCACTCATAAATTTT+TGG | - | chr2_4:8301848-8301867 | None:intergenic | 25.0% |
! | AAATTTATGAGTGAAGTCTA+TGG | + | chr2_4:8301849-8301868 | Msa0313020:intron | 25.0% |
! | TTTATAGTTTATCTTGTGAG+AGG | + | chr2_4:8301934-8301953 | Msa0313020:intron | 25.0% |
!!! | ACTAGAAACTTTTTGTTTCA+GGG | - | chr2_4:8302229-8302248 | None:intergenic | 25.0% |
! | AATATTCAACATCAACGTTT+AGG | - | chr2_4:8302305-8302324 | None:intergenic | 25.0% |
!! | AAAAAAGCACATATAATTGC+AGG | - | chr2_4:8302793-8302812 | None:intergenic | 25.0% |
!!! | ATATGTGCTTTTTTTGCTAA+AGG | + | chr2_4:8302799-8302818 | Msa0313020:CDS | 25.0% |
! | TATTAGAAATATGCACAAAG+GGG | - | chr2_4:8302989-8303008 | None:intergenic | 25.0% |
! | TTAAATGCAGATTTATTCTC+TGG | - | chr2_4:8303223-8303242 | None:intergenic | 25.0% |
!!! | AAAGATTTTAGTTCACCTTT+AGG | + | chr2_4:8303349-8303368 | Msa0313020:CDS | 25.0% |
! | ATAGAAGTGATAAAAAAGGA+TGG | - | chr2_4:8303526-8303545 | None:intergenic | 25.0% |
! | CAAAAAAAATAGAGTAGCAA+AGG | + | chr2_4:8303969-8303988 | Msa0313020:CDS | 25.0% |
! | AGTTAAAAAATCAGTTGACA+AGG | + | chr2_4:8304158-8304177 | Msa0313020:CDS | 25.0% |
! | AGCAATATGTTTCTTTATGT+CGG | + | chr2_4:8304232-8304251 | Msa0313020:CDS | 25.0% |
! | AACAAAAACTGTGCAAAAAA+AGG | - | chr2_4:8304290-8304309 | None:intergenic | 25.0% |
!!! | CAGTTTTTGTTATTTGTCAA+TGG | + | chr2_4:8304299-8304318 | Msa0313020:intron | 25.0% |
! | ATCTATTCTGTCAAATCAAA+CGG | - | chr2_4:8304352-8304371 | None:intergenic | 25.0% |
!!! | AGATATATATTTTTGTGTGC+AGG | + | chr2_4:8304368-8304387 | Msa0313020:intron | 25.0% |
!!! | GATATATATTTTTGTGTGCA+GGG | + | chr2_4:8304369-8304388 | Msa0313020:intron | 25.0% |
!!! | TGTACAAAAAAGAGGTATTT+GGG | - | chr2_4:8304431-8304450 | None:intergenic | 25.0% |
!!! | TTTTTTGTACAGTTTCTGTT+TGG | + | chr2_4:8304440-8304459 | Msa0313020:three_prime_UTR | 25.0% |
! | GTTACTTGTTTAGCAATATT+TGG | + | chr2_4:8304660-8304679 | Msa0313020:three_prime_UTR | 25.0% |
! | TTTCATGCATATGAAAAATC+TGG | + | chr2_4:8304754-8304773 | Msa0313020:three_prime_UTR | 25.0% |
GAAAACAAATGTGCAAGAAT+TGG | - | chr2_4:8298586-8298605 | None:intergenic | 30.0% | |
AACTAATACAAGTGCTTGAA+TGG | - | chr2_4:8298685-8298704 | None:intergenic | 30.0% | |
CAAGCACTTGTATTAGTTAA+TGG | + | chr2_4:8298687-8298706 | Msa0313020:intron | 30.0% | |
AATGATTAGGTATCCCTTAT+AGG | + | chr2_4:8298778-8298797 | Msa0313020:intron | 30.0% | |
!! | ATTTTTGAGCTTATGCAACA+CGG | - | chr2_4:8298815-8298834 | None:intergenic | 30.0% |
TTACACAAAACCAGGATATA+GGG | - | chr2_4:8298855-8298874 | None:intergenic | 30.0% | |
CTATACTTCATCCTTTAACT+AGG | + | chr2_4:8298929-8298948 | Msa0313020:intron | 30.0% | |
TGTTAATAATGAGAACTACG+CGG | - | chr2_4:8299152-8299171 | None:intergenic | 30.0% | |
ATTACTAACGATTGAAGGAT+TGG | - | chr2_4:8299316-8299335 | None:intergenic | 30.0% | |
AAATTCATAAAGCACGAGAT+AGG | - | chr2_4:8299409-8299428 | None:intergenic | 30.0% | |
CTAGGTCACGAAATTTATTT+AGG | - | chr2_4:8299753-8299772 | None:intergenic | 30.0% | |
TTCAATGCCTATCAATATTG+AGG | - | chr2_4:8299828-8299847 | None:intergenic | 30.0% | |
ACAACTCAACCCTTTAAATT+AGG | + | chr2_4:8299900-8299919 | Msa0313020:intron | 30.0% | |
TGAGGAAGTCAAAATTGTAT+TGG | - | chr2_4:8300221-8300240 | None:intergenic | 30.0% | |
!!! | ATTTTGACTTCCTCAAAATG+AGG | + | chr2_4:8300226-8300245 | Msa0313020:intron | 30.0% |
TGGAAGAAATAGAGGAAAAT+GGG | - | chr2_4:8300299-8300318 | None:intergenic | 30.0% | |
TTGACTATTAGATACACCTA+TGG | - | chr2_4:8300424-8300443 | None:intergenic | 30.0% | |
GGATTCAAATGAATAATGCT+AGG | - | chr2_4:8300618-8300637 | None:intergenic | 30.0% | |
TCAAAATTAGTACAGATCGA+GGG | - | chr2_4:8300664-8300683 | None:intergenic | 30.0% | |
TTCAAAATTAGTACAGATCG+AGG | - | chr2_4:8300665-8300684 | None:intergenic | 30.0% | |
GATGGAAAAGTTAGAACTAA+TGG | - | chr2_4:8300707-8300726 | None:intergenic | 30.0% | |
TTTGAATTATGATGTTGGTC+TGG | + | chr2_4:8300730-8300749 | Msa0313020:intron | 30.0% | |
!! | TATTTTTGTAGAGACAGTAG+AGG | + | chr2_4:8300770-8300789 | Msa0313020:intron | 30.0% |
! | TTCTTGATTTGATCCTTTAC+TGG | + | chr2_4:8300974-8300993 | Msa0313020:intron | 30.0% |
AACAAATAAAGGGGTTTGAA+GGG | - | chr2_4:8301087-8301106 | None:intergenic | 30.0% | |
!! | GATAGGTATTGAATATATCC+TGG | + | chr2_4:8301123-8301142 | Msa0313020:intron | 30.0% |
TTGAATGCTAGATACATCTA+TGG | - | chr2_4:8301333-8301352 | None:intergenic | 30.0% | |
TCTAGCATTCAACTTTGTAA+AGG | + | chr2_4:8301341-8301360 | Msa0313020:intron | 30.0% | |
! | AAGTTTGAAATGAACCTGAT+AGG | + | chr2_4:8301455-8301474 | Msa0313020:intron | 30.0% |
ATTACTAAACATTGAGGGAT+TGG | - | chr2_4:8301560-8301579 | None:intergenic | 30.0% | |
!! | TTTTAATTGTGATGTTGGTC+TGG | + | chr2_4:8301686-8301705 | Msa0313020:intron | 30.0% |
CATTTCATACAGACAATAGA+CGG | - | chr2_4:8301970-8301989 | None:intergenic | 30.0% | |
TTCTCTTCCATATAATGTGA+TGG | - | chr2_4:8302135-8302154 | None:intergenic | 30.0% | |
!! | CTAGAAACTTTTTGTTTCAG+GGG | - | chr2_4:8302228-8302247 | None:intergenic | 30.0% |
!! | GACTAGAAACTTTTTGTTTC+AGG | - | chr2_4:8302230-8302249 | None:intergenic | 30.0% |
! | ATCAAGTTTTCACTTGGTTT+TGG | - | chr2_4:8302255-8302274 | None:intergenic | 30.0% |
AACGTTGATGTTGAATATTC+TGG | + | chr2_4:8302306-8302325 | Msa0313020:CDS | 30.0% | |
AGCTTCTTTATCTGATGTTA+AGG | + | chr2_4:8302383-8302402 | Msa0313020:CDS | 30.0% | |
TCCTCAACAAAATTATCTCT+CGG | - | chr2_4:8302462-8302481 | None:intergenic | 30.0% | |
GGACTAATTTATGTTGTTAG+AGG | - | chr2_4:8302670-8302689 | None:intergenic | 30.0% | |
ATAATGATAGAGACTATGTG+TGG | - | chr2_4:8302691-8302710 | None:intergenic | 30.0% | |
! | TCACACTATCTTTTACATGA+AGG | - | chr2_4:8302855-8302874 | None:intergenic | 30.0% |
AGAGAATTGGAATTGGAAAA+AGG | + | chr2_4:8302925-8302944 | Msa0313020:CDS | 30.0% | |
CTTCTATGAAAAGCAGTAAA+TGG | - | chr2_4:8303079-8303098 | None:intergenic | 30.0% | |
!! | AACTTCTCTTTTTCATGAGA+TGG | - | chr2_4:8303178-8303197 | None:intergenic | 30.0% |
TATATCCTCTGTACATATGT+TGG | - | chr2_4:8303321-8303340 | None:intergenic | 30.0% | |
TGAAGAGAAAGAGGATTTAT+GGG | - | chr2_4:8303398-8303417 | None:intergenic | 30.0% | |
ATAAAAAAGGATGGTCGAAA+TGG | - | chr2_4:8303517-8303536 | None:intergenic | 30.0% | |
! | AGCATTGAGATACCAAATAT+TGG | + | chr2_4:8303589-8303608 | Msa0313020:CDS | 30.0% |
AGATACCAAATATTGGAGAT+GGG | + | chr2_4:8303596-8303615 | Msa0313020:CDS | 30.0% | |
GGATAGAAACACTGAAAAAA+CGG | + | chr2_4:8303905-8303924 | Msa0313020:CDS | 30.0% | |
! | AAGAGTTGCTAAAACCATTT+TGG | + | chr2_4:8304097-8304116 | Msa0313020:CDS | 30.0% |
! | TGGACTAACTTTGCAATTTT+TGG | - | chr2_4:8304258-8304277 | None:intergenic | 30.0% |
! | TATTTGTCAATGGAAGTACA+TGG | + | chr2_4:8304309-8304328 | Msa0313020:intron | 30.0% |
!! | CTGTACAAAAAAGAGGTATT+TGG | - | chr2_4:8304432-8304451 | None:intergenic | 30.0% |
ACAGAAACTGTACAAAAAAG+AGG | - | chr2_4:8304439-8304458 | None:intergenic | 30.0% | |
! | TTTCAAAGTCAAGGTTGATT+TGG | + | chr2_4:8304503-8304522 | Msa0313020:three_prime_UTR | 30.0% |
CTTGAATTGCATGGTTTATA+AGG | + | chr2_4:8304607-8304626 | Msa0313020:three_prime_UTR | 30.0% | |
TCTACCGAAGAATCTGAATT+TGG | - | chr2_4:8298191-8298210 | None:intergenic | 35.0% | |
TCATCATCATCTTGAAGTGA+TGG | - | chr2_4:8298221-8298240 | None:intergenic | 35.0% | |
TGAAGAAGTAGAAGTAGAAG+AGG | + | chr2_4:8298253-8298272 | Msa0313020:CDS | 35.0% | |
AGAAGTTGAACAAGAAGAAG+AGG | + | chr2_4:8298310-8298329 | Msa0313020:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | + | chr2_4:8298427-8298446 | Msa0313020:CDS | 35.0% | |
ACAGAGAGTGAACATATCAA+AGG | + | chr2_4:8298515-8298534 | Msa0313020:CDS | 35.0% | |
!!! | TTTTGTTTGACACTGACTTG+AGG | + | chr2_4:8298628-8298647 | Msa0313020:intron | 35.0% |
!! | TTTGTTTGACACTGACTTGA+GGG | + | chr2_4:8298629-8298648 | Msa0313020:intron | 35.0% |
TTAGGTATCCCTTATAGGAT+AGG | + | chr2_4:8298783-8298802 | Msa0313020:intron | 35.0% | |
! | GGCTATTTCCTATCCTATAA+GGG | - | chr2_4:8298794-8298813 | None:intergenic | 35.0% |
CTTACACAAAACCAGGATAT+AGG | - | chr2_4:8298856-8298875 | None:intergenic | 35.0% | |
!!! | CTATATCCTGGTTTTGTGTA+AGG | + | chr2_4:8298854-8298873 | Msa0313020:intron | 35.0% |
!! | TTCTACAGATGGATTGAAGT+TGG | - | chr2_4:8299095-8299114 | None:intergenic | 35.0% |
TTGTTCATCTCTTCTACAGA+TGG | - | chr2_4:8299106-8299125 | None:intergenic | 35.0% | |
AAGTTTGCAGTGAACCTAAT+AGG | + | chr2_4:8299211-8299230 | Msa0313020:intron | 35.0% | |
TGTTTCTTCTCATCAGAGTT+GGG | - | chr2_4:8299254-8299273 | None:intergenic | 35.0% | |
TTTCAATTGTGATGTTGGTC+AGG | + | chr2_4:8299438-8299457 | Msa0313020:intron | 35.0% | |
AGAAACAATAAAGGTGGAAG+AGG | + | chr2_4:8299487-8299506 | Msa0313020:CDS | 35.0% | |
! | TTTGCTATGTTTATCCGCAT+CGG | - | chr2_4:8299654-8299673 | None:intergenic | 35.0% |
GAAAACAAATGTGCAAGTAG+TGG | - | chr2_4:8299731-8299750 | None:intergenic | 35.0% | |
GTGCTTTCCTCAATATTGAT+AGG | + | chr2_4:8299818-8299837 | Msa0313020:intron | 35.0% | |
!! | GATAGGCATTGAATATATCC+TGG | + | chr2_4:8299835-8299854 | Msa0313020:intron | 35.0% |
AGGCAAATTCAACATTGTAG+TGG | + | chr2_4:8299920-8299939 | Msa0313020:intron | 35.0% | |
ACATTGTAGTGGCTCAAAAA+AGG | + | chr2_4:8299931-8299950 | Msa0313020:intron | 35.0% | |
TCTTTGACAGCTCATATAGA+AGG | + | chr2_4:8299963-8299982 | Msa0313020:intron | 35.0% | |
CTTTGACAGCTCATATAGAA+GGG | + | chr2_4:8299964-8299983 | Msa0313020:intron | 35.0% | |
AACAAAGCCTTAGACTATCT+GGG | - | chr2_4:8299996-8300015 | None:intergenic | 35.0% | |
AAACAAAGCCTTAGACTATC+TGG | - | chr2_4:8299997-8300016 | None:intergenic | 35.0% | |
!! | AGATAGTCTAAGGCTTTGTT+TGG | + | chr2_4:8299996-8300015 | Msa0313020:intron | 35.0% |
!! | GATAGTCTAAGGCTTTGTTT+GGG | + | chr2_4:8299997-8300016 | Msa0313020:intron | 35.0% |
TTGGGAAATATGGGAGAAAA+TGG | + | chr2_4:8300065-8300084 | Msa0313020:intron | 35.0% | |
GGAAGTCAAAATTGTATTGG+AGG | - | chr2_4:8300218-8300237 | None:intergenic | 35.0% | |
! | ACAAAACTCTCCTCATTTTG+AGG | - | chr2_4:8300239-8300258 | None:intergenic | 35.0% |
AGAAATAGAGGAAAATGGGA+GGG | - | chr2_4:8300295-8300314 | None:intergenic | 35.0% | |
AAGAAATAGAGGAAAATGGG+AGG | - | chr2_4:8300296-8300315 | None:intergenic | 35.0% | |
GTGGAAGAAATAGAGGAAAA+TGG | - | chr2_4:8300300-8300319 | None:intergenic | 35.0% | |
AAGCTACATAAGTTTGGCAT+TGG | - | chr2_4:8300395-8300414 | None:intergenic | 35.0% | |
AGTCAGAAGCTACATAAGTT+TGG | - | chr2_4:8300401-8300420 | None:intergenic | 35.0% | |
AAACGAAGAAGCAATAGACA+TGG | + | chr2_4:8300815-8300834 | Msa0313020:CDS | 35.0% | |
AGAACAAGAAACAGTTGTAG+AGG | + | chr2_4:8300848-8300867 | Msa0313020:CDS | 35.0% | |
TTTGCTACGTTTATCTGCAT+CGG | - | chr2_4:8300913-8300932 | None:intergenic | 35.0% | |
GAAAACAAATGTGCCAGTAA+AGG | - | chr2_4:8300990-8301009 | None:intergenic | 35.0% | |
CCAGGTCACGTAATTTATTA+AGG | - | chr2_4:8301012-8301031 | None:intergenic | 35.0% | |
CCTTAATAAATTACGTGACC+TGG | + | chr2_4:8301009-8301028 | Msa0313020:intron | 35.0% | |
GAACAAATAAAGGGGTTTGA+AGG | - | chr2_4:8301088-8301107 | None:intergenic | 35.0% | |
ATATATCCTGGTTATGCCTT+TGG | + | chr2_4:8301135-8301154 | Msa0313020:intron | 35.0% | |
!!! | GTTGAATTTTCCTGGTTCTA+GGG | - | chr2_4:8301199-8301218 | None:intergenic | 35.0% |
! | ACTACAAGGTTGAATTTTCC+TGG | - | chr2_4:8301207-8301226 | None:intergenic | 35.0% |
AGGAAAATTCAACCTTGTAG+TGG | + | chr2_4:8301206-8301225 | Msa0313020:intron | 35.0% | |
! | TCTTTTGCAGCTCTTATAGA+AGG | + | chr2_4:8301250-8301269 | Msa0313020:intron | 35.0% |
! | CTTTTGCAGCTCTTATAGAA+GGG | + | chr2_4:8301251-8301270 | Msa0313020:intron | 35.0% |
AGCATTCAACTTTGTAAAGG+AGG | + | chr2_4:8301344-8301363 | Msa0313020:intron | 35.0% | |
ATTCAACTTTGTAAAGGAGG+TGG | + | chr2_4:8301347-8301366 | Msa0313020:intron | 35.0% | |
GGATTCAACTGAATAAAGCT+AGG | - | chr2_4:8301519-8301538 | None:intergenic | 35.0% | |
! | GGAGATTTTACGAGTTTACT+TGG | + | chr2_4:8301870-8301889 | Msa0313020:intron | 35.0% |
TGTAGATTCAAGCCAACATA+TGG | + | chr2_4:8302044-8302063 | Msa0313020:intron | 35.0% | |
AATGTCAATTCCTCATGCAA+CGG | - | chr2_4:8302189-8302208 | None:intergenic | 35.0% | |
!!! | AAGTTTTCACTTGGTTTTGG+AGG | - | chr2_4:8302252-8302271 | None:intergenic | 35.0% |
! | GCAGAAATCAAGTTTTCACT+TGG | - | chr2_4:8302261-8302280 | None:intergenic | 35.0% |
AACTTGATTTCTGCTGAAGA+TGG | + | chr2_4:8302267-8302286 | Msa0313020:CDS | 35.0% | |
ACTTGATTTCTGCTGAAGAT+GGG | + | chr2_4:8302268-8302287 | Msa0313020:CDS | 35.0% | |
AATATTCTGGACATCTTCAG+AGG | + | chr2_4:8302319-8302338 | Msa0313020:CDS | 35.0% | |
! | ACCGAGAGATAATTTTGTTG+AGG | + | chr2_4:8302458-8302477 | Msa0313020:CDS | 35.0% |
! | AATTTTGTTGAGGATGCTGA+TGG | + | chr2_4:8302468-8302487 | Msa0313020:CDS | 35.0% |
TGATTGCATAACTTTCTCCT+TGG | - | chr2_4:8302505-8302524 | None:intergenic | 35.0% | |
GAAAGTTATGCAATCAGAGA+TGG | + | chr2_4:8302509-8302528 | Msa0313020:CDS | 35.0% | |
ATGTGAAACAAAAGCCATCA+AGG | + | chr2_4:8302544-8302563 | Msa0313020:CDS | 35.0% | |
!!! | GTGCTTTTTTTGCTAAAGGT+TGG | + | chr2_4:8302803-8302822 | Msa0313020:CDS | 35.0% |
TAGTGTGAATAATACTGACC+AGG | + | chr2_4:8302867-8302886 | Msa0313020:CDS | 35.0% | |
AGTGTGAATAATACTGACCA+GGG | + | chr2_4:8302868-8302887 | Msa0313020:CDS | 35.0% | |
TCAGAAGAGAGAATTGGAAT+TGG | + | chr2_4:8302918-8302937 | Msa0313020:CDS | 35.0% | |
TTTCCTTAACACCTGTTACA+GGG | - | chr2_4:8303021-8303040 | None:intergenic | 35.0% | |
! | TTTTCCTTAACACCTGTTAC+AGG | - | chr2_4:8303022-8303041 | None:intergenic | 35.0% |
GTGTTAAGGAAAATGTTGAC+AGG | + | chr2_4:8303029-8303048 | Msa0313020:CDS | 35.0% | |
AAATGTTGACAGGTCAAGAA+CGG | + | chr2_4:8303039-8303058 | Msa0313020:CDS | 35.0% | |
TGAAAAGCAGTAAATGGAAC+TGG | - | chr2_4:8303073-8303092 | None:intergenic | 35.0% | |
AAAAAGAGAAGTTTCCGATG+AGG | + | chr2_4:8303185-8303204 | Msa0313020:CDS | 35.0% | |
AAAAGAGAAGTTTCCGATGA+GGG | + | chr2_4:8303186-8303205 | Msa0313020:CDS | 35.0% | |
CTGAAGAGAAAGAGGATTTA+TGG | - | chr2_4:8303399-8303418 | None:intergenic | 35.0% | |
AATCCTCTTTCTCTTCAGAT+CGG | + | chr2_4:8303401-8303420 | Msa0313020:CDS | 35.0% | |
! | TTCATCTAGTTGGTTCATCT+AGG | + | chr2_4:8303431-8303450 | Msa0313020:CDS | 35.0% |
! | TCATCTAGTTGGTTCATCTA+GGG | + | chr2_4:8303432-8303451 | Msa0313020:CDS | 35.0% |
AGTGTATATCCATTAGCATG+TGG | - | chr2_4:8303463-8303482 | None:intergenic | 35.0% | |
ACTGAAAACCCGTTCTAATT+GGG | + | chr2_4:8303480-8303499 | Msa0313020:CDS | 35.0% | |
GAGATACCAAATATTGGAGA+TGG | + | chr2_4:8303595-8303614 | Msa0313020:CDS | 35.0% | |
AAAGCTTCCCTTCTAATTAG+AGG | + | chr2_4:8303625-8303644 | Msa0313020:CDS | 35.0% | |
AAGCTTCCCTTCTAATTAGA+GGG | + | chr2_4:8303626-8303645 | Msa0313020:CDS | 35.0% | |
AGTTGTGCAAACTACCAAAA+TGG | + | chr2_4:8303841-8303860 | Msa0313020:CDS | 35.0% | |
AACTACCAAAATGGTGACAT+AGG | + | chr2_4:8303850-8303869 | Msa0313020:CDS | 35.0% | |
TATCCTATCTTCAACACCAA+AGG | - | chr2_4:8303890-8303909 | None:intergenic | 35.0% | |
ACTCTTTCACAAGATCAACA+AGG | - | chr2_4:8304083-8304102 | None:intergenic | 35.0% | |
!! | CTAAAACCATTTTGGCATGA+GGG | + | chr2_4:8304105-8304124 | Msa0313020:CDS | 35.0% |
GCAAAAAAAGGACACTTACA+TGG | - | chr2_4:8304278-8304297 | None:intergenic | 35.0% | |
TATTCTGTCAAATCAAACGG+AGG | - | chr2_4:8304349-8304368 | None:intergenic | 35.0% | |
CAGGGATATGTCAATAAACA+TGG | + | chr2_4:8304387-8304406 | Msa0313020:intron | 35.0% | |
GAATGGAACAAGAGAAAATG+CGG | - | chr2_4:8304574-8304593 | None:intergenic | 35.0% | |
!! | TGTTCCATTCTGAAGTAAAC+TGG | + | chr2_4:8304584-8304603 | Msa0313020:three_prime_UTR | 35.0% |
AGAAGAGGAAGAAGAAGATC+AGG | + | chr2_4:8298268-8298287 | Msa0313020:CDS | 40.0% | |
AGAAGATCAGGAAGAAGAAG+AGG | + | chr2_4:8298280-8298299 | Msa0313020:CDS | 40.0% | |
TCAGGAAGAAGAAGAGGAAA+TGG | + | chr2_4:8298286-8298305 | Msa0313020:CDS | 40.0% | |
AGTTGAACAAGAAGAAGAGG+AGG | + | chr2_4:8298313-8298332 | Msa0313020:CDS | 40.0% | |
GGAAGAAGTTGAAGATGAAG+AGG | + | chr2_4:8298337-8298356 | Msa0313020:CDS | 40.0% | |
AGTTGAAGATGAAGAGGAAG+AGG | + | chr2_4:8298343-8298362 | Msa0313020:CDS | 40.0% | |
AGTAGAAACAGTAGTAGCAG+TGG | + | chr2_4:8298376-8298395 | Msa0313020:CDS | 40.0% | |
AGAAGAAGAAGAAGAAGAGG+AGG | + | chr2_4:8298454-8298473 | Msa0313020:CDS | 40.0% | |
TGAATGGAAACCTTGTGCAA+CGG | - | chr2_4:8298669-8298688 | None:intergenic | 40.0% | |
! | CGGCTATTTCCTATCCTATA+AGG | - | chr2_4:8298795-8298814 | None:intergenic | 40.0% |
GATATAGGGTCTGTTTGGAT+GGG | - | chr2_4:8298841-8298860 | None:intergenic | 40.0% | |
!! | GGTTGGCTTTACCTAGTTAA+AGG | - | chr2_4:8298943-8298962 | None:intergenic | 40.0% |
! | CCTTATTTCGAGCTACTACA+GGG | - | chr2_4:8298964-8298983 | None:intergenic | 40.0% |
! | ACCTTATTTCGAGCTACTAC+AGG | - | chr2_4:8298965-8298984 | None:intergenic | 40.0% |
! | TCTTTTGCAGCTCATACAGT+AGG | + | chr2_4:8298993-8299012 | Msa0313020:intron | 40.0% |
! | CTTTTGCAGCTCATACAGTA+GGG | + | chr2_4:8298994-8299013 | Msa0313020:intron | 40.0% |
GTTAGATGCACATACGAAGT+CGG | - | chr2_4:8299070-8299089 | None:intergenic | 40.0% | |
GTGAACCTAATAGGTCAATG+TGG | + | chr2_4:8299220-8299239 | Msa0313020:intron | 40.0% | |
TTGCACCACATTGACCTATT+AGG | - | chr2_4:8299228-8299247 | None:intergenic | 40.0% | |
GTGTTTCTTCTCATCAGAGT+TGG | - | chr2_4:8299255-8299274 | None:intergenic | 40.0% | |
!! | AAGGATTGGTTCCACTCATT+GGG | - | chr2_4:8299302-8299321 | None:intergenic | 40.0% |
AGAGCATGACAAGTTTAGAG+CGG | - | chr2_4:8299365-8299384 | None:intergenic | 40.0% | |
TTCAAATTCTCTTCCCGATG+CGG | + | chr2_4:8299637-8299656 | Msa0313020:CDS | 40.0% | |
TTGCTATGTTTATCCGCATC+GGG | - | chr2_4:8299653-8299672 | None:intergenic | 40.0% | |
GATGCGGATAAACATAGCAA+AGG | + | chr2_4:8299653-8299672 | Msa0313020:CDS | 40.0% | |
!!! | ATATATCCTGGTTTTGCCTC+AGG | + | chr2_4:8299847-8299866 | Msa0313020:intron | 40.0% |
GATTGAACCCAGATAGTCTA+AGG | + | chr2_4:8299986-8300005 | Msa0313020:intron | 40.0% | |
GAAATAGAGGAAAATGGGAG+GGG | - | chr2_4:8300294-8300313 | None:intergenic | 40.0% | |
TGAGCAAGTGGAAGAAATAG+AGG | - | chr2_4:8300307-8300326 | None:intergenic | 40.0% | |
GGAAAAAAGGAATGAGCAAG+TGG | - | chr2_4:8300319-8300338 | None:intergenic | 40.0% | |
!! | TTAGGCTTTGTTTGCGAGTT+TGG | - | chr2_4:8300365-8300384 | None:intergenic | 40.0% |
TATGTAGCTTCTGACTCCAT+AGG | + | chr2_4:8300405-8300424 | Msa0313020:intron | 40.0% | |
TGTTCACCTCCTTTACAGAT+GGG | - | chr2_4:8300453-8300472 | None:intergenic | 40.0% | |
TTGTTCACCTCCTTTACAGA+TGG | - | chr2_4:8300454-8300473 | None:intergenic | 40.0% | |
! | AAGTTTGAAATGAACCCGAC+AGG | + | chr2_4:8300554-8300573 | Msa0313020:intron | 40.0% |
AGGGATTGGATTCAACTCAT+TGG | - | chr2_4:8300645-8300664 | None:intergenic | 40.0% | |
ATTAGTACAGATCGAGGGAT+TGG | - | chr2_4:8300659-8300678 | None:intergenic | 40.0% | |
! | TTTTGTAGAGACAGTAGAGG+TGG | + | chr2_4:8300773-8300792 | Msa0313020:intron | 40.0% |
AGAAGCAATAGACATGGAAG+TGG | + | chr2_4:8300821-8300840 | Msa0313020:CDS | 40.0% | |
TTGCTACGTTTATCTGCATC+GGG | - | chr2_4:8300912-8300931 | None:intergenic | 40.0% | |
GATGCAGATAAACGTAGCAA+AGG | + | chr2_4:8300912-8300931 | Msa0313020:CDS | 40.0% | |
CTCAATACAGAGTCAAAACC+AGG | - | chr2_4:8301030-8301049 | None:intergenic | 40.0% | |
AACTACACATGCTGATCCAA+AGG | - | chr2_4:8301154-8301173 | None:intergenic | 40.0% | |
!! | GGTTGAATTTTCCTGGTTCT+AGG | - | chr2_4:8301200-8301219 | None:intergenic | 40.0% |
TTGAACCCAAAGAGTCTAAG+AGG | + | chr2_4:8301275-8301294 | Msa0313020:intron | 40.0% | |
ACGATACAGAAGTTTGGCAT+TGG | - | chr2_4:8301304-8301323 | None:intergenic | 40.0% | |
AGTCAGACGATACAGAAGTT+TGG | - | chr2_4:8301310-8301329 | None:intergenic | 40.0% | |
ATGAACCTGATAGGTCAATG+CGG | + | chr2_4:8301464-8301483 | Msa0313020:intron | 40.0% | |
ATACAGACAATAGACGGAAG+TGG | - | chr2_4:8301964-8301983 | None:intergenic | 40.0% | |
TCACATCAAGCTCCATATGT+TGG | - | chr2_4:8302059-8302078 | None:intergenic | 40.0% | |
TATGGAGCTTGATGTGAAAG+AGG | + | chr2_4:8302062-8302081 | Msa0313020:CDS | 40.0% | |
TGATGTGAAAGAGGAGAACT+TGG | + | chr2_4:8302071-8302090 | Msa0313020:CDS | 40.0% | |
GATGTGAAAGAGGAGAACTT+GGG | + | chr2_4:8302072-8302091 | Msa0313020:CDS | 40.0% | |
ATGTGAAAGAGGAGAACTTG+GGG | + | chr2_4:8302073-8302092 | Msa0313020:CDS | 40.0% | |
AGTACGGCCATCACATTATA+TGG | + | chr2_4:8302125-8302144 | Msa0313020:CDS | 40.0% | |
AGATGCTTTACTCATGCTCA+TGG | - | chr2_4:8302163-8302182 | None:intergenic | 40.0% | |
GCTGAAGATGGGAAAAATCA+AGG | + | chr2_4:8302279-8302298 | Msa0313020:CDS | 40.0% | |
!! | GAAGCTTTGCTATTGCAATC+TGG | - | chr2_4:8302369-8302388 | None:intergenic | 40.0% |
CACCAAGTCATCTAGTGATA+CGG | + | chr2_4:8302410-8302429 | Msa0313020:CDS | 40.0% | |
ACCAAGTCATCTAGTGATAC+GGG | + | chr2_4:8302411-8302430 | Msa0313020:CDS | 40.0% | |
TAGTGATACGGGAAAAGATG+TGG | + | chr2_4:8302422-8302441 | Msa0313020:CDS | 40.0% | |
AAACAAAAGCCATCAAGGTC+TGG | + | chr2_4:8302549-8302568 | Msa0313020:intron | 40.0% | |
CCATCTTTAATCTCAGCACT+GGG | - | chr2_4:8302760-8302779 | None:intergenic | 40.0% | |
TCCATCTTTAATCTCAGCAC+TGG | - | chr2_4:8302761-8302780 | None:intergenic | 40.0% | |
GTGTGAATAATACTGACCAG+GGG | + | chr2_4:8302869-8302888 | Msa0313020:CDS | 40.0% | |
TGTGAATAATACTGACCAGG+GGG | + | chr2_4:8302870-8302889 | Msa0313020:CDS | 40.0% | |
TGCACATCAGAAGAGAGAAT+TGG | + | chr2_4:8302912-8302931 | Msa0313020:CDS | 40.0% | |
TTTGTTTGGTCAACCTCTTC+AGG | + | chr2_4:8302960-8302979 | Msa0313020:intron | 40.0% | |
!! | TAAAGGCATTTCCCTGTAAC+AGG | + | chr2_4:8303007-8303026 | Msa0313020:intron | 40.0% |
TTTCCCTGTAACAGGTGTTA+AGG | + | chr2_4:8303015-8303034 | Msa0313020:intron | 40.0% | |
TTCTGCATGCTCATTTGCAA+AGG | - | chr2_4:8303127-8303146 | None:intergenic | 40.0% | |
TAGCAATCATTTCCTCTGCA+CGG | - | chr2_4:8303291-8303310 | None:intergenic | 40.0% | |
CGAAACCAACATATGTACAG+AGG | + | chr2_4:8303313-8303332 | Msa0313020:CDS | 40.0% | |
ATCCTCTTTCTCTTCAGATC+GGG | + | chr2_4:8303402-8303421 | Msa0313020:CDS | 40.0% | |
! | CGGGAAGATTTTCATCTAGT+TGG | + | chr2_4:8303421-8303440 | Msa0313020:CDS | 40.0% |
CACTGAAAACCCGTTCTAAT+TGG | + | chr2_4:8303479-8303498 | Msa0313020:CDS | 40.0% | |
AGAAGGTTCCCAATTAGAAC+GGG | - | chr2_4:8303491-8303510 | None:intergenic | 40.0% | |
CAGAAGGTTCCCAATTAGAA+CGG | - | chr2_4:8303492-8303511 | None:intergenic | 40.0% | |
AGAGGGTCATAAAGATCTCT+GGG | - | chr2_4:8303562-8303581 | None:intergenic | 40.0% | |
AAGAGGGTCATAAAGATCTC+TGG | - | chr2_4:8303563-8303582 | None:intergenic | 40.0% | |
TCTCAATGCTATCACGAAGA+GGG | - | chr2_4:8303579-8303598 | None:intergenic | 40.0% | |
ATCTCAATGCTATCACGAAG+AGG | - | chr2_4:8303580-8303599 | None:intergenic | 40.0% | |
AGAGACCCATCTCCAATATT+TGG | - | chr2_4:8303604-8303623 | None:intergenic | 40.0% | |
GGATGACCCTCTAATTAGAA+GGG | - | chr2_4:8303635-8303654 | None:intergenic | 40.0% | |
AACTTGTGATGAAGCCTGAA+CGG | - | chr2_4:8303656-8303675 | None:intergenic | 40.0% | |
TATGATGATTCTGCTGCAGT+TGG | + | chr2_4:8303682-8303701 | Msa0313020:CDS | 40.0% | |
ATGATGATTCTGCTGCAGTT+GGG | + | chr2_4:8303683-8303702 | Msa0313020:CDS | 40.0% | |
ACCAAAGCAGAGATAACATC+AGG | + | chr2_4:8303817-8303836 | Msa0313020:CDS | 40.0% | |
TCCTGATGTTATCTCTGCTT+TGG | - | chr2_4:8303821-8303840 | None:intergenic | 40.0% | |
CAAAATGGTGACATAGGTGT+GGG | + | chr2_4:8303856-8303875 | Msa0313020:CDS | 40.0% | |
!! | ATGCCTTTGGTGTTGAAGAT+AGG | + | chr2_4:8303884-8303903 | Msa0313020:CDS | 40.0% |
!! | GCTAAAACCATTTTGGCATG+AGG | + | chr2_4:8304104-8304123 | Msa0313020:CDS | 40.0% |
TATCTTCAGTGGTCGGAATT+TGG | - | chr2_4:8304206-8304225 | None:intergenic | 40.0% | |
TTAGCAGTATCTTCAGTGGT+CGG | - | chr2_4:8304213-8304232 | None:intergenic | 40.0% | |
TTGCTTAGCAGTATCTTCAG+TGG | - | chr2_4:8304217-8304236 | None:intergenic | 40.0% | |
!! | CAAAAAAGAGGTATTTGGGC+TGG | - | chr2_4:8304427-8304446 | None:intergenic | 40.0% |
AGACGGAAGTTGTCATGAAT+TGG | - | chr2_4:8304472-8304491 | None:intergenic | 40.0% | |
TTGAAACAGATAGCCTCAGA+CGG | - | chr2_4:8304489-8304508 | None:intergenic | 40.0% | |
GGCTATCTGTTTCAAAGTCA+AGG | + | chr2_4:8304494-8304513 | Msa0313020:three_prime_UTR | 40.0% | |
CAAGCCAGTTTACTTCAGAA+TGG | - | chr2_4:8304591-8304610 | None:intergenic | 40.0% | |
!! | GTAAACTGGCTTGAATTGCA+TGG | + | chr2_4:8304598-8304617 | Msa0313020:three_prime_UTR | 40.0% |
TTTCAACCCCTGCTAGTATT+GGG | + | chr2_4:8304689-8304708 | Msa0313020:three_prime_UTR | 40.0% | |
TGAACAAGAAGAAGAGGAGG+AGG | + | chr2_4:8298316-8298335 | Msa0313020:CDS | 45.0% | |
AGATGAAGAGGAAGAGGAAG+AGG | + | chr2_4:8298349-8298368 | Msa0313020:CDS | 45.0% | |
AGAAACAGTAGTAGCAGTGG+AGG | + | chr2_4:8298379-8298398 | Msa0313020:CDS | 45.0% | |
AGAAGAAGAAGAAGAGGAGG+AGG | + | chr2_4:8298457-8298476 | Msa0313020:CDS | 45.0% | |
GGATATAGGGTCTGTTTGGA+TGG | - | chr2_4:8298842-8298861 | None:intergenic | 45.0% | |
TCCAAACAGACCCTATATCC+TGG | + | chr2_4:8298842-8298861 | Msa0313020:intron | 45.0% | |
ACCAGGATATAGGGTCTGTT+TGG | - | chr2_4:8298846-8298865 | None:intergenic | 45.0% | |
GCTGATCCTTACACAAAACC+AGG | - | chr2_4:8298863-8298882 | None:intergenic | 45.0% | |
CTCCTAATTGCACCAACTCT+AGG | + | chr2_4:8298894-8298913 | Msa0313020:intron | 45.0% | |
!! | CACCTAGAGTTGGTGCAATT+AGG | - | chr2_4:8298899-8298918 | None:intergenic | 45.0% |
CGATTAGCAACACCTAGAGT+TGG | - | chr2_4:8298909-8298928 | None:intergenic | 45.0% | |
ATTTCGAGCTACTACAGGGT+TGG | - | chr2_4:8298960-8298979 | None:intergenic | 45.0% | |
CCCTGTAGTAGCTCGAAATA+AGG | + | chr2_4:8298961-8298980 | Msa0313020:intron | 45.0% | |
CTGAATTCGAAGAACCTCAG+AGG | + | chr2_4:8299018-8299037 | Msa0313020:CDS | 45.0% | |
TTTGGCATTTACAGCCTCTG+AGG | - | chr2_4:8299035-8299054 | None:intergenic | 45.0% | |
AGTCGGACACTACAGAAGTT+TGG | - | chr2_4:8299053-8299072 | None:intergenic | 45.0% | |
!! | GAAGGATTGGTTCCACTCAT+TGG | - | chr2_4:8299303-8299322 | None:intergenic | 45.0% |
AAAGGTGGAAGAGGAAGAAG+AGG | + | chr2_4:8299496-8299515 | Msa0313020:CDS | 45.0% | |
AGAAGAAGAGGAAGAGGAAG+AGG | + | chr2_4:8299535-8299554 | Msa0313020:CDS | 45.0% | |
AGAGGAAGACGAAGAAGAGA+TGG | + | chr2_4:8299553-8299572 | Msa0313020:CDS | 45.0% | |
!! | TAAGGCTTTGTTTGGGAGTG+TGG | + | chr2_4:8300004-8300023 | Msa0313020:intron | 45.0% |
! | CTTTGGGGGTTGGGAAATAT+GGG | + | chr2_4:8300056-8300075 | Msa0313020:intron | 45.0% |
! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr2_4:8300360-8300379 | None:intergenic | 45.0% |
!! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr2_4:8300361-8300380 | None:intergenic | 45.0% |
ACTCGCAAACAAAGCCTAAG+AGG | + | chr2_4:8300366-8300385 | Msa0313020:intron | 45.0% | |
CAACTCGAACCCATCTGTAA+AGG | + | chr2_4:8300441-8300460 | Msa0313020:intron | 45.0% | |
TTTCACCACATTGACCTGTC+GGG | - | chr2_4:8300571-8300590 | None:intergenic | 45.0% | |
CTTTCACCACATTGACCTGT+CGG | - | chr2_4:8300572-8300591 | None:intergenic | 45.0% | |
ATGTGGTGAAAGAACCCAAC+TGG | + | chr2_4:8300580-8300599 | Msa0313020:intron | 45.0% | |
TGTGGTGAAAGAACCCAACT+GGG | + | chr2_4:8300581-8300600 | Msa0313020:intron | 45.0% | |
GGTTTCAACTCATCCCAGTT+GGG | - | chr2_4:8300597-8300616 | None:intergenic | 45.0% | |
AGGTTTCAACTCATCCCAGT+TGG | - | chr2_4:8300598-8300617 | None:intergenic | 45.0% | |
TGGATTCAACTCATTGGAGC+TGG | - | chr2_4:8300639-8300658 | None:intergenic | 45.0% | |
AGAGACAGTAGAGGTGGAAA+AGG | + | chr2_4:8300779-8300798 | Msa0313020:intron | 45.0% | |
AGCAATAGACATGGAAGTGG+AGG | + | chr2_4:8300824-8300843 | Msa0313020:CDS | 45.0% | |
! | AGGGTTGAGTTGCAGCAATT+GGG | - | chr2_4:8301180-8301199 | None:intergenic | 45.0% |
! | TAGGGTTGAGTTGCAGCAAT+TGG | - | chr2_4:8301181-8301200 | None:intergenic | 45.0% |
CTTGTAGTGGCTCACAGAAA+GGG | + | chr2_4:8301219-8301238 | Msa0313020:intron | 45.0% | |
TGTGGTTGAGCTTCAATGCA+GGG | - | chr2_4:8301378-8301397 | None:intergenic | 45.0% | |
ATGTGGTTGAGCTTCAATGC+AGG | - | chr2_4:8301379-8301398 | None:intergenic | 45.0% | |
! | TTTCACCGCATTGACCTATC+AGG | - | chr2_4:8301472-8301491 | None:intergenic | 45.0% |
GGTTTCAACTCGTCAGAGTT+GGG | - | chr2_4:8301498-8301517 | None:intergenic | 45.0% | |
AGGTTTCAACTCGTCAGAGT+TGG | - | chr2_4:8301499-8301518 | None:intergenic | 45.0% | |
TTGAATCCAGCTCCAATGAG+TGG | + | chr2_4:8300630-8300649 | Msa0313020:intron | 45.0% | |
AGGGATTGGATTCCACTCAT+TGG | - | chr2_4:8301546-8301565 | None:intergenic | 45.0% | |
AATGTGATGGCCGTACTTCA+GGG | - | chr2_4:8302122-8302141 | None:intergenic | 45.0% | |
TAATGTGATGGCCGTACTTC+AGG | - | chr2_4:8302123-8302142 | None:intergenic | 45.0% | |
CTTCAGAGGAAAACCACTGA+AGG | + | chr2_4:8302333-8302352 | Msa0313020:CDS | 45.0% | |
! | CGTATCACTAGATGACTTGG+TGG | - | chr2_4:8302412-8302431 | None:intergenic | 45.0% |
TCCCGTATCACTAGATGACT+TGG | - | chr2_4:8302415-8302434 | None:intergenic | 45.0% | |
ACGGGAAAAGATGTGGTTAC+TGG | + | chr2_4:8302429-8302448 | Msa0313020:CDS | 45.0% | |
TTTGTTGAGGATGCTGATGG+TGG | + | chr2_4:8302471-8302490 | Msa0313020:CDS | 45.0% | |
TGCAATCAGAGATGGAGTCA+AGG | + | chr2_4:8302517-8302536 | Msa0313020:CDS | 45.0% | |
GCAATCAGAGATGGAGTCAA+GGG | + | chr2_4:8302518-8302537 | Msa0313020:CDS | 45.0% | |
GATTAACTCCTCCTGATAGC+AGG | + | chr2_4:8302719-8302738 | Msa0313020:intron | 45.0% | |
AGACTTCTAGTCCTGCTATC+AGG | - | chr2_4:8302733-8302752 | None:intergenic | 45.0% | |
! | CCCAGTGCTGAGATTAAAGA+TGG | + | chr2_4:8302757-8302776 | Msa0313020:CDS | 45.0% |
GGAAGCTACAAGAACTACCT+CGG | - | chr2_4:8302834-8302853 | None:intergenic | 45.0% | |
GCAAATGAGCATGCAGAATG+TGG | + | chr2_4:8303129-8303148 | Msa0313020:intron | 45.0% | |
TGGAAGAAGCAAGTCCAAGT+TGG | + | chr2_4:8303149-8303168 | Msa0313020:CDS | 45.0% | |
TCATGAGATGGATGCCAACT+TGG | - | chr2_4:8303166-8303185 | None:intergenic | 45.0% | |
AGCAATCATTTCCTCTGCAC+GGG | - | chr2_4:8303290-8303309 | None:intergenic | 45.0% | |
ACCTTTAGGTGCAAGTGCTT+TGG | + | chr2_4:8303363-8303382 | Msa0313020:CDS | 45.0% | |
! | TCCAAAGCACTTGCACCTAA+AGG | - | chr2_4:8303367-8303386 | None:intergenic | 45.0% |
TTCCCGATCTGAAGAGAAAG+AGG | - | chr2_4:8303407-8303426 | None:intergenic | 45.0% | |
GATGGTCGAAATGGAACAGA+AGG | - | chr2_4:8303508-8303527 | None:intergenic | 45.0% | |
AGGGTCATAAAGATCTCTGG+GGG | - | chr2_4:8303560-8303579 | None:intergenic | 45.0% | |
GAGGGTCATAAAGATCTCTG+GGG | - | chr2_4:8303561-8303580 | None:intergenic | 45.0% | |
CGGATGACCCTCTAATTAGA+AGG | - | chr2_4:8303636-8303655 | None:intergenic | 45.0% | |
AATTAGAGGGTCATCCGTTC+AGG | + | chr2_4:8303639-8303658 | Msa0313020:CDS | 45.0% | |
CGAGGAACAGAACTTCTGTT+TGG | - | chr2_4:8303778-8303797 | None:intergenic | 45.0% | |
AACAGAAGTTCTGTTCCTCG+CGG | + | chr2_4:8303778-8303797 | Msa0313020:CDS | 45.0% | |
! | CCACACCTATGTCACCATTT+TGG | - | chr2_4:8303858-8303877 | None:intergenic | 45.0% |
CCAAAATGGTGACATAGGTG+TGG | + | chr2_4:8303855-8303874 | Msa0313020:CDS | 45.0% | |
! | GAGGTTGACTTTCAGACAGA+TGG | + | chr2_4:8304012-8304031 | Msa0313020:CDS | 45.0% |
CAAGATCAACAAGGACTGCA+TGG | - | chr2_4:8304074-8304093 | None:intergenic | 45.0% | |
TTCATGACAACTTCCGTCTG+AGG | + | chr2_4:8304473-8304492 | Msa0313020:three_prime_UTR | 45.0% | |
CTTTCAACCCCTGCTAGTAT+TGG | + | chr2_4:8304688-8304707 | Msa0313020:three_prime_UTR | 45.0% | |
AGCAACTTGGAAAGACTGGT+AGG | + | chr2_4:8304713-8304732 | Msa0313020:three_prime_UTR | 45.0% | |
GCAACTTGGAAAGACTGGTA+GGG | + | chr2_4:8304714-8304733 | Msa0313020:three_prime_UTR | 45.0% | |
TGAAGAGGAAGAGGAAGAGG+AGG | + | chr2_4:8298352-8298371 | Msa0313020:CDS | 50.0% | |
AACAGTAGTAGCAGTGGAGG+AGG | + | chr2_4:8298382-8298401 | Msa0313020:CDS | 50.0% | |
AGAAGAAGAGGAGGAGGAAG+AGG | + | chr2_4:8298322-8298341 | Msa0313020:CDS | 50.0% | |
AGATGAACAACGCTGCATCG+AGG | + | chr2_4:8299116-8299135 | Msa0313020:intron | 50.0% | |
TGAATCCAGCTCCCAATGAG+TGG | + | chr2_4:8299288-8299307 | Msa0313020:intron | 50.0% | |
GGAGGAAGAAGAAGAGGAAG+AGG | + | chr2_4:8299529-8299548 | Msa0313020:CDS | 50.0% | |
GGAAGACGAAGAAGAGATGG+AGG | + | chr2_4:8299556-8299575 | Msa0313020:CDS | 50.0% | |
CGAAGAAGAGATGGAGGATG+AGG | + | chr2_4:8299562-8299581 | Msa0313020:CDS | 50.0% | |
AACTGCACATGCTGATCCTG+AGG | - | chr2_4:8299866-8299885 | None:intergenic | 50.0% | |
!! | GCTTTGTTTGGGAGTGTGGA+GGG | + | chr2_4:8300008-8300027 | Msa0313020:intron | 50.0% |
! | CTTTGTTTGGGAGTGTGGAG+GGG | + | chr2_4:8300009-8300028 | Msa0313020:intron | 50.0% |
!! | GCTTTGGGGGTTGGGAAATA+TGG | + | chr2_4:8300055-8300074 | Msa0313020:intron | 50.0% |
TAGAGGAAAATGGGAGGGGA+GGG | - | chr2_4:8300290-8300309 | None:intergenic | 50.0% | |
ATAGAGGAAAATGGGAGGGG+AGG | - | chr2_4:8300291-8300310 | None:intergenic | 50.0% | |
!! | AGGGGAGGGCTTTGGAAAAA+AGG | - | chr2_4:8300332-8300351 | None:intergenic | 50.0% |
TTTGCGAGTTTGGAGGGGAA+GGG | - | chr2_4:8300355-8300374 | None:intergenic | 50.0% | |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr2_4:8300362-8300381 | None:intergenic | 50.0% |
!! | TTTGGCATTGGCAGCCTCTT+AGG | - | chr2_4:8300383-8300402 | None:intergenic | 50.0% |
CTCGAACCCATCTGTAAAGG+AGG | + | chr2_4:8300444-8300463 | Msa0313020:intron | 50.0% | |
ATGAACCCGACAGGTCAATG+TGG | + | chr2_4:8300563-8300582 | Msa0313020:intron | 50.0% | |
GACAGTAGAGGTGGAAAAGG+AGG | + | chr2_4:8300782-8300801 | Msa0313020:CDS | 50.0% | |
AGTAGAGGTGGAAAAGGAGG+AGG | + | chr2_4:8300785-8300804 | Msa0313020:CDS | 50.0% | |
TGCAACTGTTGCAGCTGTTG+CGG | - | chr2_4:8301055-8301074 | None:intergenic | 50.0% | |
AGGGGTTTGAAGGGAAACCA+TGG | - | chr2_4:8301078-8301097 | None:intergenic | 50.0% | |
! | GCTGATCCAAAGGCATAACC+AGG | - | chr2_4:8301144-8301163 | None:intergenic | 50.0% |
TGCAACTCAACCCTAGAACC+AGG | + | chr2_4:8301186-8301205 | Msa0313020:intron | 50.0% | |
CCTTTCTGTGAGCCACTACA+AGG | - | chr2_4:8301221-8301240 | None:intergenic | 50.0% | |
CCTTGTAGTGGCTCACAGAA+AGG | + | chr2_4:8301218-8301237 | Msa0313020:intron | 50.0% | |
GGCAGCCTCTTAGACTCTTT+GGG | - | chr2_4:8301283-8301302 | None:intergenic | 50.0% | |
TGGCAGCCTCTTAGACTCTT+TGG | - | chr2_4:8301284-8301303 | None:intergenic | 50.0% | |
TGGATTCCACTCATTGGAGC+TGG | - | chr2_4:8301540-8301559 | None:intergenic | 50.0% | |
TGGTTCACTGCATCCTTCAG+TGG | - | chr2_4:8302349-8302368 | None:intergenic | 50.0% | |
!! | TGATGGTGGTCAGAACTCCA+AGG | + | chr2_4:8302485-8302504 | Msa0313020:CDS | 50.0% |
AAGCCATCAAGGTCTGGTCA+TGG | + | chr2_4:8302555-8302574 | Msa0313020:intron | 50.0% | |
CTACCATGACCAGACCTTGA+TGG | - | chr2_4:8302561-8302580 | None:intergenic | 50.0% | |
CTTCTAGTCCTGCTATCAGG+AGG | - | chr2_4:8302730-8302749 | None:intergenic | 50.0% | |
AATACTGACCAGGGGGATGA+AGG | + | chr2_4:8302877-8302896 | Msa0313020:CDS | 50.0% | |
CACAAAGGGGATACCTGAAG+AGG | - | chr2_4:8302976-8302995 | None:intergenic | 50.0% | |
GGAAACAAGCTGTCCCTCAT+CGG | - | chr2_4:8303202-8303221 | None:intergenic | 50.0% | |
CTCTGCACGGGATGAATATG+AGG | - | chr2_4:8303278-8303297 | None:intergenic | 50.0% | |
CTCATATTCATCCCGTGCAG+AGG | + | chr2_4:8303276-8303295 | Msa0313020:CDS | 50.0% | |
AGGGTTGCACCACATGCTAA+TGG | + | chr2_4:8303451-8303470 | Msa0313020:CDS | 50.0% | |
! | GCAAGACAATCTTTTCCGCG+AGG | - | chr2_4:8303796-8303815 | None:intergenic | 50.0% |
GGTGTGGGACAATATGCCTT+TGG | + | chr2_4:8303871-8303890 | Msa0313020:CDS | 50.0% | |
!! | AACGGACTGAGCATGATGCT+AGG | + | chr2_4:8303923-8303942 | Msa0313020:CDS | 50.0% |
AGACGACCCTCATGCCAAAA+TGG | - | chr2_4:8304114-8304133 | None:intergenic | 50.0% | |
TTGCTGCCCAATACTAGCAG+GGG | - | chr2_4:8304698-8304717 | None:intergenic | 50.0% | |
GTTGCTGCCCAATACTAGCA+GGG | - | chr2_4:8304699-8304718 | None:intergenic | 50.0% | |
AGTTGCTGCCCAATACTAGC+AGG | - | chr2_4:8304700-8304719 | None:intergenic | 50.0% | |
! | GCTAGTATTGGGCAGCAACT+TGG | + | chr2_4:8304700-8304719 | Msa0313020:three_prime_UTR | 50.0% |
AGTAGTAGCAGTGGAGGAGG+AGG | + | chr2_4:8298385-8298404 | Msa0313020:CDS | 55.0% | |
AGAAGAGGAGGAGGAAGAGG+AGG | + | chr2_4:8298466-8298485 | Msa0313020:CDS | 55.0% | |
GTCTCTGCAACCGTTGCACA+AGG | + | chr2_4:8298656-8298675 | Msa0313020:intron | 55.0% | |
TGGTTCCACTCATTGGGAGC+TGG | - | chr2_4:8299296-8299315 | None:intergenic | 55.0% | |
GGTGGAAGAGGAAGAAGAGG+AGG | + | chr2_4:8299499-8299518 | Msa0313020:CDS | 55.0% | |
GGAAGAGGAAGAAGAGGAGG+AGG | + | chr2_4:8299502-8299521 | Msa0313020:CDS | 55.0% | |
AGAGGAAGAAGAGGAGGAGG+AGG | + | chr2_4:8299505-8299524 | Msa0313020:CDS | 55.0% | |
GGAGGAGGAGGAAGAAGAAG+AGG | + | chr2_4:8298415-8298434 | Msa0313020:CDS | 55.0% | |
GCTGATCCTGAGGCAAAACC+AGG | - | chr2_4:8299856-8299875 | None:intergenic | 55.0% | |
!! | GGCTTTGTTTGGGAGTGTGG+AGG | + | chr2_4:8300007-8300026 | Msa0313020:intron | 55.0% |
AAATGGGAGGGGAGGGCTTT+GGG | - | chr2_4:8300283-8300302 | None:intergenic | 55.0% | |
AAAATGGGAGGGGAGGGCTT+TGG | - | chr2_4:8300284-8300303 | None:intergenic | 55.0% | |
GTTTGCGAGTTTGGAGGGGA+AGG | - | chr2_4:8300356-8300375 | None:intergenic | 55.0% | |
AGGTGAACAACGCTGCATCG+AGG | + | chr2_4:8300464-8300483 | Msa0313020:intron | 55.0% | |
TCTGCATCGGGCAGAGAATC+TGG | - | chr2_4:8300900-8300919 | None:intergenic | 55.0% | |
CAGCTGCAACAGTTGCACCA+TGG | + | chr2_4:8301058-8301077 | Msa0313020:intron | 55.0% | |
TGCCCGAGAACCCTGAAGTA+CGG | + | chr2_4:8302109-8302128 | Msa0313020:CDS | 55.0% | |
TGGCCGTACTTCAGGGTTCT+CGG | - | chr2_4:8302115-8302134 | None:intergenic | 55.0% | |
!! | GCTAAAGGTTGGTGCATCCG+AGG | + | chr2_4:8302814-8302833 | Msa0313020:CDS | 55.0% |
TCAGTGGTCGGAATTTGGCG+TGG | - | chr2_4:8304201-8304220 | None:intergenic | 55.0% | |
GGGCAGCAACTTGGAAAGAC+TGG | + | chr2_4:8304709-8304728 | Msa0313020:three_prime_UTR | 55.0% | |
AGTAGCAGTGGAGGAGGAGG+AGG | + | chr2_4:8298388-8298407 | Msa0313020:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | + | chr2_4:8298469-8298488 | Msa0313020:CDS | 60.0% | |
GGAAGAAGAGGAGGAGGAGG+AGG | + | chr2_4:8299508-8299527 | Msa0313020:CDS | 60.0% | |
AGAAGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8299511-8299530 | Msa0313020:CDS | 60.0% | |
! | TGTTTGGGAGTGTGGAGGGG+AGG | + | chr2_4:8300012-8300031 | Msa0313020:intron | 60.0% |
! | GTTTGGGAGTGTGGAGGGGA+GGG | + | chr2_4:8300013-8300032 | Msa0313020:intron | 60.0% |
! | TTTGGGAGTGTGGAGGGGAG+GGG | + | chr2_4:8300014-8300033 | Msa0313020:intron | 60.0% |
!! | AAGGGAGGGCTTTGGGGGTT+GGG | + | chr2_4:8300047-8300066 | Msa0313020:intron | 60.0% |
AATGGGAGGGGAGGGCTTTG+GGG | - | chr2_4:8300282-8300301 | None:intergenic | 60.0% | |
GAGTTTGGAGGGGAAGGGAG+GGG | - | chr2_4:8300350-8300369 | None:intergenic | 60.0% | |
CGAGTTTGGAGGGGAAGGGA+GGG | - | chr2_4:8300351-8300370 | None:intergenic | 60.0% | |
GGCCGTACTTCAGGGTTCTC+GGG | - | chr2_4:8302114-8302133 | None:intergenic | 60.0% | |
CTACGTCTCCTTCATCCCCC+TGG | - | chr2_4:8302888-8302907 | None:intergenic | 60.0% | |
GCATGAGGGTCGTCTCAGCA+AGG | + | chr2_4:8304119-8304138 | Msa0313020:CDS | 60.0% | |
AGCAGTGGAGGAGGAGGAGG+AGG | + | chr2_4:8298391-8298410 | Msa0313020:CDS | 65.0% | |
AGTGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298394-8298413 | Msa0313020:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | + | chr2_4:8298472-8298491 | Msa0313020:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | + | chr2_4:8298475-8298494 | Msa0313020:CDS | 65.0% | |
GGAAGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298478-8298497 | Msa0313020:CDS | 65.0% | |
AGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298481-8298500 | Msa0313020:CDS | 65.0% | |
GGAGGGGAAGGGAGGGCTTT+GGG | + | chr2_4:8300040-8300059 | Msa0313020:intron | 65.0% | |
GAGGGGAAGGGAGGGCTTTG+GGG | + | chr2_4:8300041-8300060 | Msa0313020:intron | 65.0% | |
! | AGGGGAAGGGAGGGCTTTGG+GGG | + | chr2_4:8300042-8300061 | Msa0313020:intron | 65.0% |
!! | GAAGGGAGGGCTTTGGGGGT+TGG | + | chr2_4:8300046-8300065 | Msa0313020:intron | 65.0% |
! | ATGGGAGGGGAGGGCTTTGG+GGG | - | chr2_4:8300281-8300300 | None:intergenic | 65.0% |
TTGGAGGGGAAGGGAGGGGA+GGG | - | chr2_4:8300346-8300365 | None:intergenic | 65.0% | |
TTTGGAGGGGAAGGGAGGGG+AGG | - | chr2_4:8300347-8300366 | None:intergenic | 65.0% | |
GCGAGTTTGGAGGGGAAGGG+AGG | - | chr2_4:8300352-8300371 | None:intergenic | 65.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298397-8298416 | Msa0313020:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298397-8298416 | Msa0313020:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298397-8298416 | Msa0313020:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298397-8298416 | Msa0313020:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298397-8298416 | Msa0313020:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:8298397-8298416 | Msa0313020:CDS | 70.0% | |
GGAGTGTGGAGGGGAGGGGA+GGG | + | chr2_4:8300018-8300037 | Msa0313020:intron | 70.0% | |
GAGTGTGGAGGGGAGGGGAG+GGG | + | chr2_4:8300019-8300038 | Msa0313020:intron | 70.0% | |
GGGAGGGGAAGGGAGGGCTT+TGG | + | chr2_4:8300039-8300058 | Msa0313020:intron | 70.0% | |
!! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr2_4:8300280-8300299 | None:intergenic | 70.0% |
GGGAAGGGAGGGGAGGGCTT+TGG | - | chr2_4:8300340-8300359 | None:intergenic | 70.0% | |
! | GGGAGTGTGGAGGGGAGGGG+AGG | + | chr2_4:8300017-8300036 | Msa0313020:intron | 75.0% |
TGTGGAGGGGAGGGGAGGGG+AGG | + | chr2_4:8300022-8300041 | Msa0313020:intron | 75.0% | |
GTGGAGGGGAGGGGAGGGGA+GGG | + | chr2_4:8300023-8300042 | Msa0313020:intron | 75.0% | |
TGGAGGGGAGGGGAGGGGAG+GGG | + | chr2_4:8300024-8300043 | Msa0313020:intron | 75.0% | |
GGGAGGGGAGGGGAGGGGAA+GGG | + | chr2_4:8300029-8300048 | Msa0313020:intron | 75.0% | |
AGGGGAGGGGAGGGGAAGGG+AGG | + | chr2_4:8300032-8300051 | Msa0313020:intron | 75.0% | |
GGGGAGGGGAGGGGAAGGGA+GGG | + | chr2_4:8300033-8300052 | Msa0313020:intron | 75.0% | |
! | GGGGAGGGGAGGGGAGGGGA+AGG | + | chr2_4:8300028-8300047 | Msa0313020:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 8298185 | 8304797 | 8298185 | ID=Msa0313020;Name=Msa0313020 |
chr2_4 | mRNA | 8298185 | 8304797 | 8298185 | ID=Msa0313020-mRNA-1;Parent=Msa0313020;Name=Msa0313020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.75|0.66|0.77|0.62|0.66|9|378|892 |
chr2_4 | exon | 8298185 | 8298536 | 8298185 | ID=Msa0313020-mRNA-1:exon:3204;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8299003 | 8299042 | 8299003 | ID=Msa0313020-mRNA-1:exon:3205;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8299460 | 8299674 | 8299460 | ID=Msa0313020-mRNA-1:exon:3206;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8300781 | 8300933 | 8300781 | ID=Msa0313020-mRNA-1:exon:3207;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8302049 | 8302565 | 8302049 | ID=Msa0313020-mRNA-1:exon:3208;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8302741 | 8302946 | 8302741 | ID=Msa0313020-mRNA-1:exon:3209;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8303029 | 8303060 | 8303029 | ID=Msa0313020-mRNA-1:exon:3210;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8303145 | 8304278 | 8303145 | ID=Msa0313020-mRNA-1:exon:3211;Parent=Msa0313020-mRNA-1 |
chr2_4 | exon | 8304390 | 8304797 | 8304390 | ID=Msa0313020-mRNA-1:exon:3212;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8298185 | 8298536 | 8298185 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8299003 | 8299042 | 8299003 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8299460 | 8299674 | 8299460 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8300781 | 8300933 | 8300781 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8302049 | 8302565 | 8302049 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8302741 | 8302946 | 8302741 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8303029 | 8303060 | 8303029 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8303145 | 8304278 | 8303145 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | CDS | 8304390 | 8304419 | 8304390 | ID=Msa0313020-mRNA-1:cds;Parent=Msa0313020-mRNA-1 |
chr2_4 | three_prime_UTR | 8304420 | 8304797 | 8304420 | ID=Msa0313020-mRNA-1:three_prime_utr;Parent=Msa0313020-mRNA-1 |
Gene Sequence |
Protein sequence |