AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0906690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0906690 MtrunA17_Chr6g0454711 93.688 1204 50 6 1 1179 1 1203 0.0 2073
Msa0906690 MtrunA17_Chr7g0220961 38.375 1243 636 25 1 1179 1 1177 0.0 664
Msa0906690 MtrunA17_Chr7g0274701 60.150 266 60 8 797 1048 8 241 1.12e-79 261
Msa0906690 MtrunA17_Chr4g0054401 28.370 853 558 8 11 837 3 828 7.99e-79 281
Msa0906690 MtrunA17_Chr6g0454681 96.063 127 4 1 1053 1179 36 161 5.09e-74 242
Msa0906690 MtrunA17_Chr1g0184641 63.194 144 22 3 912 1048 1 120 7.59e-44 155
Msa0906690 MtrunA17_Chr1g0184651 46.111 180 51 6 336 486 100 262 7.24e-21 95.9
Msa0906690 MtrunA17_Chr1g0184651 63.636 88 24 4 797 884 257 336 1.58e-20 94.7
Msa0906690 MtrunA17_Chr5g0421221 92.857 42 3 0 103 144 1 42 2.57e-19 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0906690 AT1G13220.3 39.896 1158 577 26 1 1114 1 1083 0.0 633
Msa0906690 AT1G67230.1 37.949 1170 636 20 43 1179 20 1132 0.0 627
Msa0906690 AT1G13220.2 39.685 1144 573 25 13 1114 2 1070 0.0 620
Msa0906690 AT1G68790.1 38.194 1207 596 20 1 1179 1 1085 0.0 596
Msa0906690 AT1G13220.1 49.223 386 173 6 1 368 1 381 4.35e-95 310
Msa0906690 AT5G65770.1 28.256 860 569 7 1 837 1 835 5.06e-78 278
Msa0906690 AT5G65770.3 28.256 860 569 7 1 837 1 835 5.06e-78 278
Msa0906690 AT5G65780.2 27.995 868 569 8 1 837 1 843 1.26e-74 269
Msa0906690 AT5G65770.2 27.621 887 567 9 1 837 1 862 1.42e-72 263

Find 261 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGTTCTTTCTTTACTTTC+TGG 0.120358 6_2:-5348292 None:intergenic
TTGGGTTCTTTGACTGATTC+TGG 0.169904 6_2:+5343520 Msa0906690:CDS
TTTGCTCATCAAGAAGTTTC+TGG 0.198103 6_2:-5347194 None:intergenic
TGGCTACTCTCCTATTTAAA+AGG 0.236080 6_2:-5351230 None:intergenic
AGTAGCCATAATCTAATCTT+TGG 0.256657 6_2:+5351245 Msa0906690:three_prime_UTR
TTTGATCTCCACAGACTTTA+CGG 0.257512 6_2:-5350822 None:intergenic
CCCTTTGCGAGGGCAGATTT+AGG 0.259378 6_2:-5343460 None:intergenic
TCTCAACAAGTGCGAGAAAA+TGG 0.273616 6_2:-5348337 None:intergenic
GGAAAGAGAGAGAAAATTTC+AGG 0.282006 6_2:+5348082 Msa0906690:CDS
ACTATCGGTCCTTCTATATT+AGG 0.297956 6_2:-5348683 None:intergenic
GATTTGAGATTTATTAATAA+AGG 0.307397 6_2:+5351292 Msa0906690:three_prime_UTR
CATGTAGCTGTGTTCATCTA+TGG 0.309600 6_2:-5348795 None:intergenic
AAGGACAATGTTATCGCTTC+TGG 0.315795 6_2:+5348482 Msa0906690:CDS
GTCTTTGTCGACCAACCTTT+GGG 0.317806 6_2:-5348862 None:intergenic
TTGCTTTATCTAGCTTTGTA+TGG 0.318702 6_2:-5345986 None:intergenic
TTAACCCAAAGATTAGATTA+TGG 0.339623 6_2:-5351250 None:intergenic
TCAGCTACCACTGCTACTTC+AGG 0.340563 6_2:-5350761 None:intergenic
TGGAAGAGGTTTAGAGATGT+TGG 0.343963 6_2:+5343580 Msa0906690:CDS
CAAACCATTCTGGATCTAAA+TGG 0.344630 6_2:+5348507 Msa0906690:CDS
GGTCTTTGTCGACCAACCTT+TGG 0.346536 6_2:-5348863 None:intergenic
TAGCAGCAAGGAGGAGGCCT+TGG 0.353756 6_2:+5347293 Msa0906690:CDS
GCTCCACCCACACAAGTTAC+AGG 0.356842 6_2:+5349178 Msa0906690:CDS
GCTTGCTGATCGGAAGAGTT+TGG 0.358553 6_2:+5347503 Msa0906690:CDS
GCTTCTGGCTCAAACCATTC+TGG 0.360128 6_2:+5348497 Msa0906690:CDS
GGAGCTTGAAAAGCTTGAAT+TGG 0.363341 6_2:+5347899 Msa0906690:CDS
GGCTTAGGTTTGAGAAAGAA+TGG 0.365881 6_2:+5347733 Msa0906690:CDS
CTCAGTGAAGGCTGTGGTTA+AGG 0.366251 6_2:+5348922 Msa0906690:CDS
CGATGAACCTCCGCCGCCGT+TGG 0.371742 6_2:+5343501 Msa0906690:CDS
CCTGTTTACCTCAGCAAGCC+TGG 0.372253 6_2:-5346075 None:intergenic
CCTGGGAGGAAAAGCAAATC+TGG 0.372959 6_2:+5348884 Msa0906690:CDS
AGGAGGAGGCCTTGGAGTAT+AGG 0.374167 6_2:+5347301 Msa0906690:CDS
AGAGAAAGAATTACATGAAC+TGG 0.379629 6_2:+5346698 Msa0906690:CDS
AGGACTGTGGGGAAGTTGTC+AGG 0.383083 6_2:+5348375 Msa0906690:CDS
CCAGGCTTGCTGAGGTAAAC+AGG 0.384351 6_2:+5346075 Msa0906690:CDS
GAGAATTTAAATGCTGAACT+TGG 0.385406 6_2:+5347525 Msa0906690:CDS
GGAGGAGGCCTTGGAGTATA+GGG 0.387491 6_2:+5347302 Msa0906690:CDS
AGAGCATTCTCGTTTGCAAT+TGG 0.391507 6_2:+5347632 Msa0906690:CDS
AGAAGCTTCTGGTGGTAAAC+AGG 0.391572 6_2:+5350721 Msa0906690:CDS
TCATTCACACCGCGTCGAAT+TGG 0.391919 6_2:+5343430 Msa0906690:CDS
GAAAGTGCTACACTGGAGTA+TGG 0.395439 6_2:+5351019 Msa0906690:CDS
TTGCCTCAGCCGATCAAACT+TGG 0.395495 6_2:-5344838 None:intergenic
ATTGGTACTTCAAATATAGC+TGG 0.403690 6_2:+5348599 Msa0906690:CDS
CTTGAAAGATGCTGCTGAAA+AGG 0.408230 6_2:+5348139 Msa0906690:CDS
CTTCTAGTTATGCTGAAGAT+TGG 0.410249 6_2:+5343560 Msa0906690:CDS
GAAAAGAGAGAAGCAAGATA+TGG 0.411646 6_2:+5347860 Msa0906690:CDS
TGACATTAGTGCAGAACAAC+AGG 0.416949 6_2:+5347779 Msa0906690:CDS
ATAGAATCTGTGTTAGTACT+AGG 0.419932 6_2:-5348578 None:intergenic
GCAGCAGTTTGAGCTTGAAA+TGG 0.421853 6_2:+5347239 Msa0906690:CDS
GTAGCCATAATCTAATCTTT+GGG 0.423050 6_2:+5351246 Msa0906690:three_prime_UTR
GAAAGATGATGAAGCGATGT+TGG 0.423626 6_2:+5343730 Msa0906690:CDS
GCTAGATAAAGCAAATGAAT+TGG 0.425018 6_2:+5345995 Msa0906690:CDS
TCGTGAAAGTTTGCTTCAAA+AGG 0.425567 6_2:+5346139 Msa0906690:CDS
ATTATCCATTAGCATTAGAA+TGG 0.425621 6_2:-5351398 None:intergenic
TACGAAGTCTGAGAGAATAA+AGG 0.426804 6_2:+5347380 Msa0906690:CDS
AGAGAGAGATCTAGAAGTGT+TGG 0.427600 6_2:+5346446 Msa0906690:CDS
AGGGGATAAACTGAAAATCT+TGG 0.429491 6_2:-5348558 None:intergenic
GATGAACCTCCGCCGCCGTT+GGG 0.430407 6_2:+5343502 Msa0906690:CDS
AAGATTTGAAGGAGTGGGAG+AGG 0.432343 6_2:+5346325 Msa0906690:CDS
GTGTCATCTCCTAATATAGA+AGG 0.432781 6_2:+5348674 Msa0906690:CDS
TGAGAAAGAATGGGAAGAAC+TGG 0.433982 6_2:+5347743 Msa0906690:CDS
TCGCACTTGTTGAGAAGCTC+AGG 0.436977 6_2:+5348345 Msa0906690:CDS
AACAAAGTTGAAATCATTGA+AGG 0.439065 6_2:+5347422 Msa0906690:CDS
GAGAAAATTTCAGGAGGAGA+TGG 0.442944 6_2:+5348091 Msa0906690:CDS
GAGAGAGCTGGAGAAGGAAA+AGG 0.444660 6_2:+5347473 Msa0906690:CDS
TTCCAACCTTGGTTTCCCTA+TGG 0.449849 6_2:-5347338 None:intergenic
ACTTGAGGGATGAGAGGCTT+AGG 0.450821 6_2:+5347718 Msa0906690:CDS
AGAGGAAGACGAAGAGGAGG+AGG 0.451006 6_2:+5351099 Msa0906690:CDS
CAAACAAAGGGAAGATTTGA+AGG 0.454244 6_2:+5346314 Msa0906690:CDS
AGATATGAAGTTGCGAGAGC+TGG 0.455780 6_2:+5346112 Msa0906690:CDS
GCAAATTAAATGTACTGCTT+AGG 0.458093 6_2:+5351362 Msa0906690:three_prime_UTR
GCAGAAAGATTTAATTATGA+AGG 0.459481 6_2:+5347686 Msa0906690:CDS
GCTTAGGTTTGAGAAAGAAT+GGG 0.462231 6_2:+5347734 Msa0906690:CDS
TCAGAAAAGGAAAGAGGAGA+TGG 0.464571 6_2:+5348046 Msa0906690:CDS
GAAAATAAAAGAGAGAGAGC+TGG 0.465720 6_2:+5347461 Msa0906690:CDS
AGTACTAACACAGATTCTAT+TGG 0.467255 6_2:+5348581 Msa0906690:CDS
TCTGCACTAGAGTCGTGGTT+TGG 0.467680 6_2:-5350793 None:intergenic
GATTTCGAGACTGGAGAAAG+AGG 0.467834 6_2:+5343757 Msa0906690:CDS
GAAGAGGAGGAGGAGGATCC+CGG 0.468527 6_2:+5351109 Msa0906690:CDS
TCAAAGATGATCGAGTTGTA+AGG 0.470013 6_2:+5350840 Msa0906690:CDS
GCTTCAAATTCTCAGTCTCT+TGG 0.471592 6_2:-5347590 None:intergenic
GTTGGAGAAGATTTCGAGAC+TGG 0.473700 6_2:+5343748 Msa0906690:CDS
ACATGTACTCACACTTTCTC+TGG 0.475174 6_2:-5346736 None:intergenic
AAATCTTGGACGTGCATTTG+CGG 0.475636 6_2:-5348544 None:intergenic
TAATTCTTTATTAAAAGAAA+AGG 0.478156 6_2:+5346488 Msa0906690:CDS
AACTGCATGATGCAGAAGCC+AGG 0.479517 6_2:+5346057 Msa0906690:CDS
CAGCTACCACTGCTACTTCA+GGG 0.480342 6_2:-5350760 None:intergenic
AGCTACATGGAAAGTTTGAC+AGG 0.482662 6_2:+5348809 Msa0906690:CDS
AAAGAACCCAACGGCGGCGG+AGG 0.486387 6_2:-5343508 None:intergenic
TGTCCGTTATGACTGTCCTC+TGG 0.488777 6_2:+5351340 Msa0906690:three_prime_UTR
ACTGACTGTTGAGAATCATC+TGG 0.493393 6_2:-5348839 None:intergenic
TGCTTTATCTAGCTTTGTAT+GGG 0.494171 6_2:-5345985 None:intergenic
TGAAATTCAGAAAAGGAAAG+AGG 0.498030 6_2:+5348040 Msa0906690:CDS
GAGTTCTCAAGAGGAGATGT+AGG 0.498345 6_2:-5348458 None:intergenic
AAAAGAGAGAGAGCTGGAGA+AGG 0.499778 6_2:+5347467 Msa0906690:CDS
TTCTCCCCTGTAACTTGTGT+GGG 0.500234 6_2:-5349184 None:intergenic
TTTGCAATTGGAACTAAAGC+AGG 0.501696 6_2:+5347644 Msa0906690:CDS
TATGGAAGATAATTTAAAGA+AGG 0.502698 6_2:+5347878 Msa0906690:CDS
GAGAATAAAGGAGCAAGATA+AGG 0.504185 6_2:+5347392 Msa0906690:CDS
CAGGCCATTTAGATCCAGAA+TGG 0.505160 6_2:-5348511 None:intergenic
TTGAGAATGAAATTCAGAAA+AGG 0.505300 6_2:+5348033 Msa0906690:CDS
TTCAATGCGGTCCACAGAGT+TGG 0.507071 6_2:-5350996 None:intergenic
GAAGGAAGCTGAAAACTTGA+GGG 0.507185 6_2:+5347704 Msa0906690:CDS
ACCTAAATCTGCCCTCGCAA+AGG 0.507616 6_2:+5343459 Msa0906690:CDS
GTCAAAGAACCCAACGGCGG+CGG 0.508443 6_2:-5343511 None:intergenic
AGGGGATCAGATTAGAGAAT+GGG 0.508665 6_2:+5348183 Msa0906690:CDS
GCTTTGTATGGGAAGAAGAC+TGG 0.510495 6_2:-5345974 None:intergenic
CCTAAATCTGCCCTCGCAAA+GGG 0.513002 6_2:+5343460 Msa0906690:CDS
ATCAGTATTCTACAAACAAA+GGG 0.513188 6_2:+5346302 Msa0906690:CDS
GGAAGACGAAGAGGAGGAGG+AGG 0.513977 6_2:+5351102 Msa0906690:CDS
TAGAATCTGTGTTAGTACTA+GGG 0.514155 6_2:-5348577 None:intergenic
CAACGGCGGCGGAGGTTCAT+CGG 0.515294 6_2:-5343500 None:intergenic
TCAGGAATTGCAAGGACTGT+GGG 0.515834 6_2:+5348363 Msa0906690:CDS
GAGGGGATCAGATTAGAGAA+TGG 0.517472 6_2:+5348182 Msa0906690:CDS
TGAAGAGGAAGACGAAGAGG+AGG 0.518337 6_2:+5351096 Msa0906690:CDS
AATCAGTATTCTACAAACAA+AGG 0.518377 6_2:+5346301 Msa0906690:CDS
AAGGGAAGATTTGAAGGAGT+GGG 0.519187 6_2:+5346320 Msa0906690:CDS
TAGTGATTCAATTAAACAAG+AGG 0.520601 6_2:+5347935 Msa0906690:CDS
AGTAGCTTTCTCAGTGTGAC+TGG 0.522329 6_2:-5349023 None:intergenic
ACCCCACACTCTTTACTGTC+AGG 0.524747 6_2:-5348425 None:intergenic
TTAACATTTACATCAGACTC+AGG 0.527946 6_2:-5348629 None:intergenic
CTGGAGTATGGAGATGAAGA+TGG 0.528626 6_2:+5351031 Msa0906690:CDS
TTTCCGATAGACACCTCACC+GGG 0.528768 6_2:-5351127 None:intergenic
AAAGGGAAGATTTGAAGGAG+TGG 0.529560 6_2:+5346319 Msa0906690:CDS
AGTCAATGACGTTGAAAATG+AGG 0.532131 6_2:+5351060 Msa0906690:CDS
AGTGATGGTAGGCAAAATCT+TGG 0.532235 6_2:+5346375 Msa0906690:CDS
GGGAAATCGAAGTCAACCAT+AGG 0.532315 6_2:+5347322 Msa0906690:CDS
GGAGATGGAGAAAGACCTGC+AGG 0.533102 6_2:+5348061 Msa0906690:CDS
CAGAGAAAATCACGACCTAT+CGG 0.533991 6_2:+5343397 Msa0906690:CDS
GGAGTTTAGCAGCAAGGAGG+AGG 0.534064 6_2:+5347287 Msa0906690:CDS
CTGGTGGGCGCAAGAAGAAA+AGG 0.535720 6_2:+5349146 Msa0906690:CDS
ACTCTTGCTTCTCAATAAGA+AGG 0.535766 6_2:-5344809 None:intergenic
CTCCACCCACACAAGTTACA+GGG 0.536013 6_2:+5349179 Msa0906690:CDS
TTGTCATCAACATTGTCTCT+TGG 0.538284 6_2:-5350962 None:intergenic
GCAAGAACTAGCTGAAACTC+AGG 0.538381 6_2:+5344857 Msa0906690:CDS
AGAATTTAAATGCTGAACTT+GGG 0.538482 6_2:+5347526 Msa0906690:CDS
AAGGAGGCCAATGAGTTCCT+AGG 0.539154 6_2:+5348941 Msa0906690:CDS
AAGGTTGGTCGACAAAGACC+TGG 0.539593 6_2:+5348866 Msa0906690:CDS
CATAGATGAACACAGCTACA+TGG 0.541220 6_2:+5348796 Msa0906690:CDS
TTGTCCTTTGAGTTCTCAAG+AGG 0.541562 6_2:-5348467 None:intergenic
GTTCCAAGTTTGATCGGCTG+AGG 0.541642 6_2:+5344835 Msa0906690:CDS
AAGCTACTGGTAACAGTACA+AGG 0.542179 6_2:+5349038 Msa0906690:CDS
GGGAGAAGCGTTACAACCTC+AGG 0.543273 6_2:+5349200 Msa0906690:CDS
TGAAGAACAGTGAAGAAGAA+AGG 0.543709 6_2:+5347835 Msa0906690:CDS
AGATGAAGAGGAAGACGAAG+AGG 0.545687 6_2:+5351093 Msa0906690:CDS
TGCTAGAACACGCTCAGTGA+AGG 0.548424 6_2:+5348910 Msa0906690:CDS
TCTCCTATTTAAAAGGAATG+AGG 0.550019 6_2:-5351223 None:intergenic
CTCAAGAGGAGATGTAGGCA+AGG 0.550578 6_2:-5348453 None:intergenic
AACCATAGGGAAACCAAGGT+TGG 0.551919 6_2:+5347336 Msa0906690:CDS
AGATGTAGATGCAGAAGAGA+AGG 0.555930 6_2:+5346536 Msa0906690:CDS
TGAAGGAAGCTGAAAACTTG+AGG 0.556071 6_2:+5347703 Msa0906690:CDS
TTCTTATTGAGAAGCAAGAG+TGG 0.556750 6_2:+5344811 Msa0906690:CDS
AGTGGAGTTCCAAGTTTGAT+CGG 0.557133 6_2:+5344829 Msa0906690:CDS
CTGAAAACTTGAGGGATGAG+AGG 0.558017 6_2:+5347712 Msa0906690:CDS
TCCCCTGTAACTTGTGTGGG+TGG 0.561225 6_2:-5349181 None:intergenic
CTTCTCCCCTGTAACTTGTG+TGG 0.561940 6_2:-5349185 None:intergenic
CAAAGATGATCGAGTTGTAA+GGG 0.564712 6_2:+5350841 Msa0906690:CDS
GTTATGCTGAAGATTGGAAG+AGG 0.565774 6_2:+5343566 Msa0906690:CDS
TCTGGTGGTAAACAGGAGGC+AGG 0.569608 6_2:+5350728 Msa0906690:CDS
AGGATATGCTAAGTGATGGT+AGG 0.570303 6_2:+5346364 Msa0906690:CDS
AGATAAAGCAAATGAATTGG+TGG 0.570947 6_2:+5345998 Msa0906690:CDS
TTGCCAGAGGACAGTCATAA+CGG 0.570969 6_2:-5351343 None:intergenic
CGCTGAGGAGTTTAGCAGCA+AGG 0.571506 6_2:+5347281 Msa0906690:CDS
AAAGCAAATGAATTGGTGGA+TGG 0.572221 6_2:+5346002 Msa0906690:CDS
TACCTGACAGTAAAGAGTGT+GGG 0.574126 6_2:+5348423 Msa0906690:CDS
AATGGTTTCTTTCAGCCACA+AGG 0.575417 6_2:-5348319 None:intergenic
CATTGAAGAAAGTGCTACAC+TGG 0.575960 6_2:+5351012 Msa0906690:CDS
AGAACAACAGGAAGTTGAGA+AGG 0.576331 6_2:+5347791 Msa0906690:CDS
AGTCACACTGAGAAAGCTAC+TGG 0.580719 6_2:+5349025 Msa0906690:CDS
TAACATTTACATCAGACTCA+GGG 0.580947 6_2:-5348628 None:intergenic
AGGAGAAATTGCTTGCTGAT+CGG 0.580962 6_2:+5347493 Msa0906690:CDS
TTGGTACTTCAAATATAGCT+GGG 0.581989 6_2:+5348600 Msa0906690:CDS
CGTTCTTGAAGAGTAACTAT+CGG 0.582739 6_2:-5348698 None:intergenic
TGACGTTGAAAATGAGGACG+AGG 0.582743 6_2:+5351066 Msa0906690:CDS
AGATGCTGCTGAAAAGGAAT+GGG 0.583771 6_2:+5348145 Msa0906690:CDS
CAAGAACGACAAATAGCAGA+TGG 0.584944 6_2:+5348713 Msa0906690:CDS
AAGATGCTGCTGAAAAGGAA+TGG 0.585528 6_2:+5348144 Msa0906690:CDS
TTCGATTTCCCTATACTCCA+AGG 0.586462 6_2:-5347310 None:intergenic
GGTGGATGGAATTGAAGAGA+AGG 0.587693 6_2:+5346016 Msa0906690:CDS
CTCAGGAATTGCAAGGACTG+TGG 0.588481 6_2:+5348362 Msa0906690:CDS
TGATTCTGGCGATGATGTTG+TGG 0.589665 6_2:+5343534 Msa0906690:CDS
TTCTGGCGATGATGTTGTGG+TGG 0.589684 6_2:+5343537 Msa0906690:CDS
GGAAATCGAAGTCAACCATA+GGG 0.591240 6_2:+5347323 Msa0906690:CDS
CATTCAGACAGTACAACAGC+TGG 0.591601 6_2:+5349127 Msa0906690:CDS
CAACAGTCAGTCCCAAAGGT+TGG 0.593294 6_2:+5348851 Msa0906690:CDS
AGAATCTGTGTTAGTACTAG+GGG 0.593869 6_2:-5348576 None:intergenic
GGAGTTATCCAGCGAAACAA+AGG 0.594698 6_2:+5350688 Msa0906690:intron
TGGGAAGAAGTCAAGTCTGA+GGG 0.596327 6_2:+5348164 Msa0906690:CDS
TCAGACAGTACAACAGCTGG+TGG 0.597261 6_2:+5349130 Msa0906690:CDS
TCAAATCTCAAAAGAAAACA+TGG 0.597369 6_2:-5351276 None:intergenic
TCTGATACAGCACACAGAGA+GGG 0.597587 6_2:+5348752 Msa0906690:CDS
AGCTTGAAATGGAACAAAAG+CGG 0.598423 6_2:+5347250 Msa0906690:CDS
ACAGGAAGTTGAGAAGGAGA+AGG 0.599786 6_2:+5347797 Msa0906690:CDS
TGCGAGGGCAGATTTAGGTG+TGG 0.604336 6_2:-5343455 None:intergenic
AGAGAGGATATGCTAAGTGA+TGG 0.606221 6_2:+5346360 Msa0906690:CDS
TCAAGAGGAGATGTAGGCAA+GGG 0.609994 6_2:-5348452 None:intergenic
AGTGAAGGCTGTGGTTAAGG+AGG 0.611402 6_2:+5348925 Msa0906690:CDS
AACACGCTCAGTGAAGGCTG+TGG 0.612656 6_2:+5348916 Msa0906690:CDS
TATGAAGTTGCGAGAGCTGG+AGG 0.612971 6_2:+5346115 Msa0906690:CDS
TGAGAAGCTCAGGAATTGCA+AGG 0.613927 6_2:+5348355 Msa0906690:CDS
GAAAGAACGTGAACGCCTTG+TGG 0.614870 6_2:+5348304 Msa0906690:CDS
AAAGTTTGCTTCAAAAGGAG+CGG 0.615802 6_2:+5346144 Msa0906690:CDS
TTCTCAACAGTCAGTCCCAA+AGG 0.615847 6_2:+5348847 Msa0906690:CDS
TATGATTATCAGTACAACAT+GGG 0.616422 6_2:+5344783 Msa0906690:CDS
GGACTGTGGGGAAGTTGTCA+GGG 0.618125 6_2:+5348376 Msa0906690:CDS
AAAGTTGAAATCATTGAAGG+AGG 0.620070 6_2:+5347425 Msa0906690:CDS
GATCTCAACCGTAAAGTCTG+TGG 0.620220 6_2:+5350814 Msa0906690:CDS
ATCTCCTCTTGAGAACTCAA+AGG 0.620651 6_2:+5348463 Msa0906690:CDS
ATGGGAAGAAGTCAAGTCTG+AGG 0.620671 6_2:+5348163 Msa0906690:CDS
TGAGATCTGCACTAGAGTCG+TGG 0.621822 6_2:-5350798 None:intergenic
GAGGAAGCTACGGCAAAGAG+AGG 0.623939 6_2:+5346344 Msa0906690:CDS
CGACGCGGTGTGAATGATGC+CGG 0.624761 6_2:-5343424 None:intergenic
AATGATGCCGGTGTACCGAT+AGG 0.624939 6_2:-5343412 None:intergenic
CTTACGTCTTATGCCGCCTG+AGG 0.630170 6_2:-5349216 None:intergenic
TGTTGGACTGCTTGATGAAG+CGG 0.630456 6_2:+5343597 Msa0906690:CDS
CTTTCCGATAGACACCTCAC+CGG 0.632952 6_2:-5351128 None:intergenic
TGAAGCTTACTCAAGATGAG+AGG 0.633299 6_2:+5347607 Msa0906690:CDS
GGATTCTGCAAAGAAAACGC+TGG 0.634610 6_2:+5346668 Msa0906690:CDS
CAGTACATTTAATTTGCCAG+AGG 0.636039 6_2:-5351356 None:intergenic
AAGAGAGAGAAAATTTCAGG+AGG 0.637039 6_2:+5348085 Msa0906690:CDS
CAAACTTCTAAGATTGCTGA+AGG 0.639219 6_2:+5349076 Msa0906690:CDS
TGCAGAAGCCAGGCTTGCTG+AGG 0.640040 6_2:+5346067 Msa0906690:CDS
CATTTGCGGAACACAGACAC+AGG 0.642105 6_2:-5348530 None:intergenic
CTGATACAGCACACAGAGAG+GGG 0.642923 6_2:+5348753 Msa0906690:CDS
AGCTTCTGGTGGTAAACAGG+AGG 0.643491 6_2:+5350724 Msa0906690:CDS
AGAAGCGTTACAACCTCAGG+CGG 0.644751 6_2:+5349203 Msa0906690:CDS
ACCTGACAGTAAAGAGTGTG+GGG 0.645197 6_2:+5348424 Msa0906690:CDS
TGGTGCTACAACCAACTCTG+TGG 0.647168 6_2:+5350985 Msa0906690:CDS
AGGAGTGGGAGAGGAAGCTA+CGG 0.647313 6_2:+5346334 Msa0906690:CDS
GACGTTGAAAATGAGGACGA+GGG 0.648902 6_2:+5351067 Msa0906690:CDS
TTCTGATACAGCACACAGAG+AGG 0.655597 6_2:+5348751 Msa0906690:CDS
ACGTTGAAAATGAGGACGAG+GGG 0.656363 6_2:+5351068 Msa0906690:CDS
AGGTTGGTCGACAAAGACCT+GGG 0.661364 6_2:+5348867 Msa0906690:CDS
TTACCTGACAGTAAAGAGTG+TGG 0.661921 6_2:+5348422 Msa0906690:CDS
ACGACAAATAGCAGATGGAG+TGG 0.664564 6_2:+5348718 Msa0906690:CDS
TTATGATTATCAGTACAACA+TGG 0.667050 6_2:+5344782 Msa0906690:CDS
AATCTTCATGCATCTCACGT+TGG 0.667214 6_2:-5348247 None:intergenic
GTGTAGCACTTTCTTCAATG+CGG 0.671316 6_2:-5351009 None:intergenic
TTGAGTTTAGAAAAGCAGTG+TGG 0.671606 6_2:+5344960 Msa0906690:CDS
ATGGGAAGAAGACTGGACTT+CGG 0.672228 6_2:-5345967 None:intergenic
AGTCAACCATAGGGAAACCA+AGG 0.673395 6_2:+5347332 Msa0906690:CDS
GAATCAGTCAAAGAACCCAA+CGG 0.677951 6_2:-5343517 None:intergenic
CAGAATGCTGCTGATAGTGA+AGG 0.678423 6_2:+5349103 Msa0906690:CDS
AACATTTACATCAGACTCAG+GGG 0.678589 6_2:-5348627 None:intergenic
CAGGAATTGCAAGGACTGTG+GGG 0.681894 6_2:+5348364 Msa0906690:CDS
AGAACTAGCTGAAACTCAGG+AGG 0.683450 6_2:+5344860 Msa0906690:CDS
GCTACATGGAAAGTTTGACA+GGG 0.685346 6_2:+5348810 Msa0906690:CDS
TACATGGAAAGTTTGACAGG+GGG 0.687457 6_2:+5348812 Msa0906690:CDS
AAAGCGGAAATCTCTCGCTG+AGG 0.695563 6_2:+5347266 Msa0906690:CDS
AATGTACTGCTTAGGCACAG+AGG 0.697733 6_2:+5351370 Msa0906690:three_prime_UTR
TCTATATTAGGAGATGACAC+AGG 0.699986 6_2:-5348671 None:intergenic
GGAGGAGGAGGATCCCGGTG+AGG 0.700171 6_2:+5351114 Msa0906690:CDS
TGAGGAGTTTAGCAGCAAGG+AGG 0.705004 6_2:+5347284 Msa0906690:CDS
CAGACAGTACAACAGCTGGT+GGG 0.705347 6_2:+5349131 Msa0906690:CDS
CGTTGAAAATGAGGACGAGG+GGG 0.709289 6_2:+5351069 Msa0906690:CDS
AGAGACAATGTTGATGACAA+TGG 0.709550 6_2:+5350965 Msa0906690:CDS
GGGAAGAAGTCAAGTCTGAG+GGG 0.719282 6_2:+5348165 Msa0906690:CDS
TCCACCCACACAAGTTACAG+GGG 0.722043 6_2:+5349180 Msa0906690:CDS
CTACATGGAAAGTTTGACAG+GGG 0.722540 6_2:+5348811 Msa0906690:CDS
TCAGTCAAAGAACCCAACGG+CGG 0.741668 6_2:-5343514 None:intergenic
TTGGTCGACAAAGACCTGGG+AGG 0.780419 6_2:+5348870 Msa0906690:CDS
GGTGTGGCACCAATTCGACG+CGG 0.794836 6_2:-5343439 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGATTTTTTTTTTGAA+TGG + chr6_2:5343799-5343818 Msa0906690:intron 10.0%
!!! TTCTGTTTTTTTTTTTTTTT+TGG + chr6_2:5343871-5343890 Msa0906690:intron 10.0%
!!! TCTGTTTTTTTTTTTTTTTT+GGG + chr6_2:5343872-5343891 Msa0906690:intron 10.0%
!!! TTTTACAGATTATAATTTAA+AGG - chr6_2:5344632-5344651 None:intergenic 10.0%
!!! CATAATTGAATTTTAAATAT+TGG + chr6_2:5345572-5345591 Msa0906690:intron 10.0%
!!! TATTCATAAAATTTAAAACA+AGG - chr6_2:5346194-5346213 None:intergenic 10.0%
!! TAATTCTTTATTAAAAGAAA+AGG + chr6_2:5346488-5346507 Msa0906690:CDS 10.0%
!!! TAAAGGTAAAAATATTTTTT+TGG + chr6_2:5351309-5351328 Msa0906690:three_prime_UTR 10.0%
!!! TAGATAAGTTGTTTTTTTTT+TGG + chr6_2:5344139-5344158 Msa0906690:intron 15.0%
!! TTAAAAGAAATGTCAATATA+CGG + chr6_2:5344579-5344598 Msa0906690:intron 15.0%
!! TAATCTGTAAAATAATTTCA+TGG + chr6_2:5344640-5344659 Msa0906690:intron 15.0%
!! TTAATCTTGTATAAAAAATG+TGG + chr6_2:5345423-5345442 Msa0906690:intron 15.0%
!!! AATTTTAAATATTGGATATC+CGG + chr6_2:5345580-5345599 Msa0906690:intron 15.0%
!! TAAAATTATATTATTTGGAC+TGG - chr6_2:5346865-5346884 None:intergenic 15.0%
!!! TTAGTTTTTTGAAATTTACT+TGG + chr6_2:5346956-5346975 Msa0906690:intron 15.0%
!!! AGTTATTACTTTTAAACTAT+CGG - chr6_2:5346985-5347004 None:intergenic 15.0%
!! AATGTTAATATAGAAAAAGT+AGG + chr6_2:5348644-5348663 Msa0906690:CDS 15.0%
!!! TGTTTTATATATAGATAGAT+TGG + chr6_2:5349405-5349424 Msa0906690:intron 15.0%
!!! ACTTTTCTTTATTTCTTATT+GGG - chr6_2:5349490-5349509 None:intergenic 15.0%
!!! AACTTTTCTTTATTTCTTAT+TGG - chr6_2:5349491-5349510 None:intergenic 15.0%
!!! TTAATTTTGGATTTTTTTAC+TGG + chr6_2:5350228-5350247 Msa0906690:intron 15.0%
!!! TAATTTTGGATTTTTTTACT+GGG + chr6_2:5350229-5350248 Msa0906690:intron 15.0%
!!! GATTTGAGATTTATTAATAA+AGG + chr6_2:5351292-5351311 Msa0906690:three_prime_UTR 15.0%
!!! TTTTTTTGAATGGTTTTTCT+AGG + chr6_2:5343809-5343828 Msa0906690:intron 20.0%
!!! TTTTTTGAATGGTTTTTCTA+GGG + chr6_2:5343810-5343829 Msa0906690:intron 20.0%
!!! TTTTTTTTTGGGTTTATAGA+TGG + chr6_2:5343883-5343902 Msa0906690:intron 20.0%
!!! GTTATTGTAACAAGTTATTT+TGG + chr6_2:5344691-5344710 Msa0906690:intron 20.0%
!! ATTAACAATTGATTAACTTC+TGG + chr6_2:5344736-5344755 Msa0906690:intron 20.0%
!!! AGTCTATAATTTTGTTGAAT+TGG + chr6_2:5345018-5345037 Msa0906690:intron 20.0%
!!! CTTTGTTTTTCTTTTTACAT+TGG + chr6_2:5345073-5345092 Msa0906690:intron 20.0%
!! TTATATCTATCTAATCATAG+GGG - chr6_2:5345644-5345663 None:intergenic 20.0%
!! CTTATATCTATCTAATCATA+GGG - chr6_2:5345645-5345664 None:intergenic 20.0%
!! ACTTATATCTATCTAATCAT+AGG - chr6_2:5345646-5345665 None:intergenic 20.0%
!!! ATTGCTTTCATTTGATTTTA+AGG + chr6_2:5345841-5345860 Msa0906690:intron 20.0%
!!! CAAATTACAAGTTTTACAAA+AGG - chr6_2:5346597-5346616 None:intergenic 20.0%
!!! GTTATTACTTTTAAACTATC+GGG - chr6_2:5346984-5347003 None:intergenic 20.0%
!! TTAATAATAATCACCACTTA+TGG + chr6_2:5347013-5347032 Msa0906690:intron 20.0%
!!! AAGTTATGTAAATTTGCTTT+CGG - chr6_2:5347102-5347121 None:intergenic 20.0%
!! TATGGAAGATAATTTAAAGA+AGG + chr6_2:5347878-5347897 Msa0906690:CDS 20.0%
!! TGAAAAGGTAAAAAATGAAA+AGG + chr6_2:5347971-5347990 Msa0906690:CDS 20.0%
!! TATATTGGCATTAATTCTAA+AGG + chr6_2:5349349-5349368 Msa0906690:intron 20.0%
!! TAAGAAATAAAGAAAAGTTG+TGG + chr6_2:5349492-5349511 Msa0906690:intron 20.0%
!!! TTTTTTTTGTTGCAAAAGTT+TGG + chr6_2:5349662-5349681 Msa0906690:intron 20.0%
!!! ACAATTTTCTTACAAATCTT+GGG - chr6_2:5349951-5349970 None:intergenic 20.0%
!!! TACAATTTTCTTACAAATCT+TGG - chr6_2:5349952-5349971 None:intergenic 20.0%
!! AGATTTGTAAGAAAATTGTA+TGG + chr6_2:5349952-5349971 Msa0906690:intron 20.0%
!!! AGTTCTAAAACTTACTATTT+TGG + chr6_2:5350023-5350042 Msa0906690:intron 20.0%
!! TGCTAGATTGATTATTTATA+TGG + chr6_2:5350061-5350080 Msa0906690:intron 20.0%
!!! TTTGTATAGTTTTTTGATTG+AGG + chr6_2:5350193-5350212 Msa0906690:intron 20.0%
!!! TTGTATAGTTTTTTGATTGA+GGG + chr6_2:5350194-5350213 Msa0906690:intron 20.0%
!!! GGCATTTGAATTATTAATTT+TGG + chr6_2:5350215-5350234 Msa0906690:intron 20.0%
!! AGTAAGATATTCTGTATTAT+TGG - chr6_2:5350300-5350319 None:intergenic 20.0%
!! ATTAAATCAACCATCAATAA+AGG - chr6_2:5350879-5350898 None:intergenic 20.0%
!!! TTATTGATGGTTGATTTAAT+TGG + chr6_2:5350879-5350898 Msa0906690:intron 20.0%
!! GTTTATAGATGGTTTTTCTA+GGG + chr6_2:5343894-5343913 Msa0906690:intron 25.0%
! TAGATATTACTGTAACTTTG+AGG + chr6_2:5343994-5344013 Msa0906690:intron 25.0%
!!! GGTTTTTTGTGAATTAGATA+CGG + chr6_2:5344160-5344179 Msa0906690:intron 25.0%
!!! GTTTTTTGTGAATTAGATAC+GGG + chr6_2:5344161-5344180 Msa0906690:intron 25.0%
!! TAATTTGCATTTGTTAGTTG+TGG + chr6_2:5344199-5344218 Msa0906690:intron 25.0%
! AATATTGTCATGATATTGCA+AGG + chr6_2:5344517-5344536 Msa0906690:intron 25.0%
! TTATGATTATCAGTACAACA+TGG + chr6_2:5344782-5344801 Msa0906690:CDS 25.0%
! TATGATTATCAGTACAACAT+GGG + chr6_2:5344783-5344802 Msa0906690:CDS 25.0%
!!! CTTTTTACATTGGTTAGTAT+TGG + chr6_2:5345083-5345102 Msa0906690:intron 25.0%
! ATAGTTCATAGTGATGTTAA+AGG - chr6_2:5345179-5345198 None:intergenic 25.0%
! TTACAAAAAAATTTGTGCAC+CGG + chr6_2:5345541-5345560 Msa0906690:intron 25.0%
! ATTCAATTATGCATTCTAAC+CGG - chr6_2:5345563-5345582 None:intergenic 25.0%
!! TTTGTCTAAAGTATCAAGTA+TGG - chr6_2:5345606-5345625 None:intergenic 25.0%
! CTTTAGACAAATTACTTCTT+AGG + chr6_2:5345615-5345634 Msa0906690:intron 25.0%
! ATGAAAAGACAACCAATTAA+TGG - chr6_2:5345736-5345755 None:intergenic 25.0%
!!! TTCATTGTGTTTGCTATTTT+AGG + chr6_2:5345751-5345770 Msa0906690:intron 25.0%
! AAACACAAGACTAAATATGA+TGG - chr6_2:5346224-5346243 None:intergenic 25.0%
! AATCAGTATTCTACAAACAA+AGG + chr6_2:5346301-5346320 Msa0906690:CDS 25.0%
! ATCAGTATTCTACAAACAAA+GGG + chr6_2:5346302-5346321 Msa0906690:CDS 25.0%
!!! GTAAAACTTGTAATTTGCTT+TGG + chr6_2:5346600-5346619 Msa0906690:intron 25.0%
!!! TTTTGGTCTTTCCATATTTA+TGG + chr6_2:5346623-5346642 Msa0906690:intron 25.0%
! TCATAACCATACCATAAATA+TGG - chr6_2:5346637-5346656 None:intergenic 25.0%
! ATTCAATTTCTTTCCATAAG+TGG - chr6_2:5347029-5347048 None:intergenic 25.0%
! ATTATATATCACAGGACTAT+GGG - chr6_2:5347072-5347091 None:intergenic 25.0%
! GAAAACACATTATATATCAC+AGG - chr6_2:5347080-5347099 None:intergenic 25.0%
! CTTGTACATATATTTCTTAC+AGG + chr6_2:5347164-5347183 Msa0906690:intron 25.0%
! TACATATATTTCTTACAGGA+AGG + chr6_2:5347168-5347187 Msa0906690:intron 25.0%
! ACATATATTTCTTACAGGAA+GGG + chr6_2:5347169-5347188 Msa0906690:intron 25.0%
! AACAAAGTTGAAATCATTGA+AGG + chr6_2:5347422-5347441 Msa0906690:CDS 25.0%
! AGAATTTAAATGCTGAACTT+GGG + chr6_2:5347526-5347545 Msa0906690:CDS 25.0%
! GCAGAAAGATTTAATTATGA+AGG + chr6_2:5347686-5347705 Msa0906690:CDS 25.0%
! TAGTGATTCAATTAAACAAG+AGG + chr6_2:5347935-5347954 Msa0906690:CDS 25.0%
!! GGAATTTCTTTTATCTGAAA+AGG + chr6_2:5347956-5347975 Msa0906690:CDS 25.0%
!! AAAAAATGAAAAGGCACAAA+TGG + chr6_2:5347980-5347999 Msa0906690:CDS 25.0%
!! AAATGGTTCAAGATTTTGAA+TGG + chr6_2:5347997-5348016 Msa0906690:CDS 25.0%
! TTGAGAATGAAATTCAGAAA+AGG + chr6_2:5348033-5348052 Msa0906690:CDS 25.0%
!!! CTGGTTGTATTTATTTTTTG+CGG + chr6_2:5349308-5349327 Msa0906690:intron 25.0%
!! GTTTTCTTGGATGTTTATAT+TGG + chr6_2:5349334-5349353 Msa0906690:intron 25.0%
!! TTTATTTCTTATTGGGAAGA+GGG - chr6_2:5349483-5349502 None:intergenic 25.0%
! ACTATATTAGAAACTGAAAG+GGG - chr6_2:5349559-5349578 None:intergenic 25.0%
! CACTATATTAGAAACTGAAA+GGG - chr6_2:5349560-5349579 None:intergenic 25.0%
! ACACTATATTAGAAACTGAA+AGG - chr6_2:5349561-5349580 None:intergenic 25.0%
! TTGCAACAAAAAAAAAAAGC+AGG - chr6_2:5349657-5349676 None:intergenic 25.0%
! TAATAATTATTACGTTCCCA+CGG + chr6_2:5349686-5349705 Msa0906690:intron 25.0%
! TTGGCTAAATCAATTAACAT+AGG - chr6_2:5349827-5349846 None:intergenic 25.0%
! TTGACTAATCAATTAACAGT+TGG - chr6_2:5349846-5349865 None:intergenic 25.0%
! TACAAATCTTGGGATAATTT+GGG - chr6_2:5349941-5349960 None:intergenic 25.0%
! TTACAAATCTTGGGATAATT+TGG - chr6_2:5349942-5349961 None:intergenic 25.0%
! AGAAAATTGTATGGTTACAA+CGG + chr6_2:5349961-5349980 Msa0906690:intron 25.0%
! AATATCTTACTGTGTGTAAT+AGG + chr6_2:5350309-5350328 Msa0906690:intron 25.0%
! CATTAAATAGTTTCTCAATC+GGG - chr6_2:5350349-5350368 None:intergenic 25.0%
! GCATTAAATAGTTTCTCAAT+CGG - chr6_2:5350350-5350369 None:intergenic 25.0%
! ATTGAGAAACTATTTAATGC+AGG + chr6_2:5350350-5350369 Msa0906690:intron 25.0%
! TTGGTATTTCAAACTGTAAA+AGG - chr6_2:5350946-5350965 None:intergenic 25.0%
! TTAACCCAAAGATTAGATTA+TGG - chr6_2:5351253-5351272 None:intergenic 25.0%
! TCAAATCTCAAAAGAAAACA+TGG - chr6_2:5351279-5351298 None:intergenic 25.0%
!! ATTTTCCATTCTAATGCTAA+TGG + chr6_2:5351393-5351412 Msa0906690:three_prime_UTR 25.0%
! ATTATCCATTAGCATTAGAA+TGG - chr6_2:5351401-5351420 None:intergenic 25.0%
! GGTTTATAGATGGTTTTTCT+AGG + chr6_2:5343893-5343912 Msa0906690:intron 30.0%
CATCAATATGCTACAAAACT+CGG - chr6_2:5343971-5343990 None:intergenic 30.0%
TTGAAGACTATAAACATGTC+TGG + chr6_2:5344051-5344070 Msa0906690:intron 30.0%
TATTCGACTCTGATACATAT+CGG - chr6_2:5344080-5344099 None:intergenic 30.0%
ATATGTATCAGAGTCGAATA+CGG + chr6_2:5344080-5344099 Msa0906690:intron 30.0%
TGTTGTTACTATTGAGTTTG+AGG + chr6_2:5344229-5344248 Msa0906690:intron 30.0%
ACTATTGAGTTTGAGGAATT+AGG + chr6_2:5344236-5344255 Msa0906690:intron 30.0%
!! CAATAGTTTTGCGAGTATTT+AGG + chr6_2:5344296-5344315 Msa0906690:intron 30.0%
AAAATTCAAGGAAATAACCC+AGG - chr6_2:5344443-5344462 None:intergenic 30.0%
GAAATTGAATCACATGGTTT+AGG - chr6_2:5344467-5344486 None:intergenic 30.0%
AACTTCTCATTATTCTACAG+TGG - chr6_2:5344561-5344580 None:intergenic 30.0%
AAAGAAATGTCAATATACGG+TGG + chr6_2:5344582-5344601 Msa0906690:intron 30.0%
TACTGATAATCATAAAGCTG+CGG - chr6_2:5344777-5344796 None:intergenic 30.0%
! TCAAATTTTCCTCTCGTTTT+TGG - chr6_2:5344932-5344951 None:intergenic 30.0%
AAAAACGAGAGGAAAATTTG+AGG + chr6_2:5344931-5344950 Msa0906690:CDS 30.0%
ATAGTGATGTTAAAGGAACA+GGG - chr6_2:5345172-5345191 None:intergenic 30.0%
TGTAAAAACATCGTATATGC+TGG + chr6_2:5345351-5345370 Msa0906690:intron 30.0%
ATGTCAAGGACAAAAATGTA+GGG - chr6_2:5345392-5345411 None:intergenic 30.0%
TTCCAACAAAAACACATGTT+TGG + chr6_2:5345487-5345506 Msa0906690:intron 30.0%
GTATCATTGCAGTATATAAC+AGG - chr6_2:5345685-5345704 None:intergenic 30.0%
!! TTTTAGGTGTTCATCTTGAA+TGG + chr6_2:5345767-5345786 Msa0906690:intron 30.0%
AAACTCTGATAAAAGTCTCA+AGG - chr6_2:5345815-5345834 None:intergenic 30.0%
! AGACTTTTATCAGAGTTTTG+AGG + chr6_2:5345817-5345836 Msa0906690:intron 30.0%
!! TGCTTTATCTAGCTTTGTAT+GGG - chr6_2:5345988-5346007 None:intergenic 30.0%
!! TTGCTTTATCTAGCTTTGTA+TGG - chr6_2:5345989-5346008 None:intergenic 30.0%
GCTAGATAAAGCAAATGAAT+TGG + chr6_2:5345995-5346014 Msa0906690:CDS 30.0%
AGATAAAGCAAATGAATTGG+TGG + chr6_2:5345998-5346017 Msa0906690:CDS 30.0%
! TTTAAAACAAGGTCCATACT+CGG - chr6_2:5346183-5346202 None:intergenic 30.0%
GTGACTCAATTAATTGAAGT+TGG + chr6_2:5346245-5346264 Msa0906690:intron 30.0%
!!! CTTGTAATTTGCTTTGGTTT+TGG + chr6_2:5346606-5346625 Msa0906690:intron 30.0%
GTCTTTCCATATTTATGGTA+TGG + chr6_2:5346628-5346647 Msa0906690:intron 30.0%
AGAGAAAGAATTACATGAAC+TGG + chr6_2:5346698-5346717 Msa0906690:CDS 30.0%
!! ATTATTTGGACTGGTTTGTT+TGG - chr6_2:5346856-5346875 None:intergenic 30.0%
!! AGTTGATTTGGTTTGAGTTT+GGG - chr6_2:5346894-5346913 None:intergenic 30.0%
CATTATATATCACAGGACTA+TGG - chr6_2:5347073-5347092 None:intergenic 30.0%
AAAGTTGAAATCATTGAAGG+AGG + chr6_2:5347425-5347444 Msa0906690:CDS 30.0%
GAGAATTTAAATGCTGAACT+TGG + chr6_2:5347525-5347544 Msa0906690:CDS 30.0%
TGAAATTCAGAAAAGGAAAG+AGG + chr6_2:5348040-5348059 Msa0906690:CDS 30.0%
TAGAATCTGTGTTAGTACTA+GGG - chr6_2:5348580-5348599 None:intergenic 30.0%
ATAGAATCTGTGTTAGTACT+AGG - chr6_2:5348581-5348600 None:intergenic 30.0%
AGTACTAACACAGATTCTAT+TGG + chr6_2:5348581-5348600 Msa0906690:CDS 30.0%
ATTGGTACTTCAAATATAGC+TGG + chr6_2:5348599-5348618 Msa0906690:CDS 30.0%
TTGGTACTTCAAATATAGCT+GGG + chr6_2:5348600-5348619 Msa0906690:CDS 30.0%
TAACATTTACATCAGACTCA+GGG - chr6_2:5348631-5348650 None:intergenic 30.0%
TTAACATTTACATCAGACTC+AGG - chr6_2:5348632-5348651 None:intergenic 30.0%
!!! TTTTTTGCGGATTGTTTTCT+TGG + chr6_2:5349321-5349340 Msa0906690:intron 30.0%
! CTTGCTAATTTTCACACTAA+AGG + chr6_2:5349430-5349449 Msa0906690:intron 30.0%
! TTATTTCTTATTGGGAAGAG+GGG - chr6_2:5349482-5349501 None:intergenic 30.0%
! CTTTATTTCTTATTGGGAAG+AGG - chr6_2:5349484-5349503 None:intergenic 30.0%
CTATATTAGAAACTGAAAGG+GGG - chr6_2:5349558-5349577 None:intergenic 30.0%
! AAGTCATCTGAATTGATTCT+TGG + chr6_2:5349592-5349611 Msa0906690:intron 30.0%
! AGTCATCTGAATTGATTCTT+GGG + chr6_2:5349593-5349612 Msa0906690:intron 30.0%
AATAATTATTACGTTCCCAC+GGG + chr6_2:5349687-5349706 Msa0906690:intron 30.0%
! TCTTTTATAAAAGTGAGGTG+TGG + chr6_2:5349710-5349729 Msa0906690:intron 30.0%
GTCTTCTTGTGTTTATTACA+AGG - chr6_2:5349764-5349783 None:intergenic 30.0%
!! AGTGTATGTTTAGTTTGCAA+TGG + chr6_2:5349895-5349914 Msa0906690:intron 30.0%
ACTATACAAACTAGATAACC+AGG - chr6_2:5350183-5350202 None:intergenic 30.0%
!!! TTTTTTACTGGGTTATCTGA+AGG + chr6_2:5350240-5350259 Msa0906690:intron 30.0%
TATTGTTTGTGTCTTTCATG+TGG + chr6_2:5350389-5350408 Msa0906690:intron 30.0%
AGGCATAACATTCTATCAAA+CGG - chr6_2:5350569-5350588 None:intergenic 30.0%
AATCAGTCTTCCTTTATTGA+TGG + chr6_2:5350866-5350885 Msa0906690:intron 30.0%
! CATCCTCATTCCTTTTAAAT+AGG + chr6_2:5351220-5351239 Msa0906690:three_prime_UTR 30.0%
TCTCCTATTTAAAAGGAATG+AGG - chr6_2:5351226-5351245 None:intergenic 30.0%
AGTAGCCATAATCTAATCTT+TGG + chr6_2:5351245-5351264 Msa0906690:three_prime_UTR 30.0%
GTAGCCATAATCTAATCTTT+GGG + chr6_2:5351246-5351265 Msa0906690:three_prime_UTR 30.0%
GCAAATTAAATGTACTGCTT+AGG + chr6_2:5351362-5351381 Msa0906690:three_prime_UTR 30.0%
! CTTCTAGTTATGCTGAAGAT+TGG + chr6_2:5343560-5343579 Msa0906690:CDS 35.0%
!!! TTTCTAGGGTCTGTTTTTCT+AGG + chr6_2:5343908-5343927 Msa0906690:intron 35.0%
!! TTTTTCTAGGAATTGGTCTC+CGG + chr6_2:5343921-5343940 Msa0906690:intron 35.0%
CTCGCAAAACTATTGACAAA+TGG - chr6_2:5344291-5344310 None:intergenic 35.0%
! AGTTTTGCGAGTATTTAGGA+TGG + chr6_2:5344300-5344319 Msa0906690:intron 35.0%
!! GTTTTGCGAGTATTTAGGAT+GGG + chr6_2:5344301-5344320 Msa0906690:intron 35.0%
!! TTTTGCGAGTATTTAGGATG+GGG + chr6_2:5344302-5344321 Msa0906690:intron 35.0%
! GGGGATATATTCTCTTTTGT+CGG + chr6_2:5344321-5344340 Msa0906690:intron 35.0%
! TATTCTCTTTTGTCGGAACT+AGG + chr6_2:5344328-5344347 Msa0906690:intron 35.0%
CATGGTTTAGGCAAAATTCA+AGG - chr6_2:5344455-5344474 None:intergenic 35.0%
ATTGCAAGGAAATCTTACCA+AGG + chr6_2:5344531-5344550 Msa0906690:intron 35.0%
TATTCTACAGTGGTAATCCT+TGG - chr6_2:5344551-5344570 None:intergenic 35.0%
TAATCATCGACAAAGTAACG+TGG - chr6_2:5344720-5344739 None:intergenic 35.0%
ACTCTTGCTTCTCAATAAGA+AGG - chr6_2:5344812-5344831 None:intergenic 35.0%
TTCTTATTGAGAAGCAAGAG+TGG + chr6_2:5344811-5344830 Msa0906690:CDS 35.0%
TTGAGTTTAGAAAAGCAGTG+TGG + chr6_2:5344960-5344979 Msa0906690:CDS 35.0%
GTATTGGATACGTTGATCAT+AGG + chr6_2:5345099-5345118 Msa0906690:intron 35.0%
!! TTGATCATAGGCTTTGAACT+GGG + chr6_2:5345111-5345130 Msa0906690:intron 35.0%
TAGTGATGTTAAAGGAACAG+GGG - chr6_2:5345171-5345190 None:intergenic 35.0%
CATAGTGATGTTAAAGGAAC+AGG - chr6_2:5345173-5345192 None:intergenic 35.0%
GATGTCAAGGACAAAAATGT+AGG - chr6_2:5345393-5345412 None:intergenic 35.0%
! TTTTTGTCCTTGACATCATC+AGG + chr6_2:5345396-5345415 Msa0906690:intron 35.0%
!! CTCCAAACATGTGTTTTTGT+TGG - chr6_2:5345492-5345511 None:intergenic 35.0%
CAACAAAAACACATGTTTGG+AGG + chr6_2:5345490-5345509 Msa0906690:intron 35.0%
CAAGTATAATGCCCTTTGTA+CGG - chr6_2:5345519-5345538 None:intergenic 35.0%
! TCTAAAGTATCAAGTATGGC+CGG - chr6_2:5345602-5345621 None:intergenic 35.0%
CTTTAGTCAAACTACTTCCT+AGG + chr6_2:5345704-5345723 Msa0906690:intron 35.0%
AAAGCAAATGAATTGGTGGA+TGG + chr6_2:5346002-5346021 Msa0906690:CDS 35.0%
! TCGTGAAAGTTTGCTTCAAA+AGG + chr6_2:5346139-5346158 Msa0906690:CDS 35.0%
! AAAGTTTGCTTCAAAAGGAG+CGG + chr6_2:5346144-5346163 Msa0906690:CDS 35.0%
CAAACAAAGGGAAGATTTGA+AGG + chr6_2:5346314-5346333 Msa0906690:CDS 35.0%
ATGGTTATGATTGCAGAAAG+TGG + chr6_2:5346647-5346666 Msa0906690:intron 35.0%
AAAGTGTGAGTACATGTACT+TGG + chr6_2:5346742-5346761 Msa0906690:intron 35.0%
!! GAGTTGATTTGGTTTGAGTT+TGG - chr6_2:5346895-5346914 None:intergenic 35.0%
!! ATATTGACCTCAAAGGTACT+AGG - chr6_2:5346931-5346950 None:intergenic 35.0%
!! TAGTACCTTTGAGGTCAATA+TGG + chr6_2:5346930-5346949 Msa0906690:intron 35.0%
AATCACCATATTGACCTCAA+AGG - chr6_2:5346938-5346957 None:intergenic 35.0%
TTTGCTCATCAAGAAGTTTC+TGG - chr6_2:5347197-5347216 None:intergenic 35.0%
TGATGAGCAAAAACATACTC+TGG + chr6_2:5347206-5347225 Msa0906690:CDS 35.0%
AGCTTGAAATGGAACAAAAG+CGG + chr6_2:5347250-5347269 Msa0906690:CDS 35.0%
TACGAAGTCTGAGAGAATAA+AGG + chr6_2:5347380-5347399 Msa0906690:CDS 35.0%
GAGAATAAAGGAGCAAGATA+AGG + chr6_2:5347392-5347411 Msa0906690:CDS 35.0%
GAAAATAAAAGAGAGAGAGC+TGG + chr6_2:5347461-5347480 Msa0906690:CDS 35.0%
TTTGCAATTGGAACTAAAGC+AGG + chr6_2:5347644-5347663 Msa0906690:CDS 35.0%
GCTTAGGTTTGAGAAAGAAT+GGG + chr6_2:5347734-5347753 Msa0906690:CDS 35.0%
TGAAGAACAGTGAAGAAGAA+AGG + chr6_2:5347835-5347854 Msa0906690:CDS 35.0%
GAAAAGAGAGAAGCAAGATA+TGG + chr6_2:5347860-5347879 Msa0906690:CDS 35.0%
GGAAAGAGAGAGAAAATTTC+AGG + chr6_2:5348082-5348101 Msa0906690:CDS 35.0%
AAGAGAGAGAAAATTTCAGG+AGG + chr6_2:5348085-5348104 Msa0906690:CDS 35.0%
CACGTTCTTTCTTTACTTTC+TGG - chr6_2:5348295-5348314 None:intergenic 35.0%
CAAACCATTCTGGATCTAAA+TGG + chr6_2:5348507-5348526 Msa0906690:CDS 35.0%
AGGGGATAAACTGAAAATCT+TGG - chr6_2:5348561-5348580 None:intergenic 35.0%
AGAATCTGTGTTAGTACTAG+GGG - chr6_2:5348579-5348598 None:intergenic 35.0%
AACATTTACATCAGACTCAG+GGG - chr6_2:5348630-5348649 None:intergenic 35.0%
TCTATATTAGGAGATGACAC+AGG - chr6_2:5348674-5348693 None:intergenic 35.0%
GTGTCATCTCCTAATATAGA+AGG + chr6_2:5348674-5348693 Msa0906690:CDS 35.0%
ACTATCGGTCCTTCTATATT+AGG - chr6_2:5348686-5348705 None:intergenic 35.0%
CGTTCTTGAAGAGTAACTAT+CGG - chr6_2:5348701-5348720 None:intergenic 35.0%
!! TTTGCAAACTCGTTTTTCCT+AGG - chr6_2:5348961-5348980 None:intergenic 35.0%
!! CAAACTTCTAAGATTGCTGA+AGG + chr6_2:5349076-5349095 Msa0906690:CDS 35.0%
TAAGACGTAAGTTTAGTCTC+AGG + chr6_2:5349228-5349247 Msa0906690:intron 35.0%
AAGACGTAAGTTTAGTCTCA+GGG + chr6_2:5349229-5349248 Msa0906690:intron 35.0%
TATTGTATCAGTGTACACAC+TGG + chr6_2:5349289-5349308 Msa0906690:intron 35.0%
! CACTTTTATAAAAGACCCGT+GGG - chr6_2:5349705-5349724 None:intergenic 35.0%
!! TCACTTTTATAAAAGACCCG+TGG - chr6_2:5349706-5349725 None:intergenic 35.0%
! ACGGGTCTTTTATAAAAGTG+AGG + chr6_2:5349705-5349724 Msa0906690:intron 35.0%
ATAGGAACAGTTATGATCTG+CGG - chr6_2:5349809-5349828 None:intergenic 35.0%
ATGGAAAAACTGCAAGTCTT+TGG + chr6_2:5349914-5349933 Msa0906690:intron 35.0%
AAATACGACAACACCTAATG+CGG - chr6_2:5350001-5350020 None:intergenic 35.0%
AACTAGATAACCAGGATTGA+GGG - chr6_2:5350175-5350194 None:intergenic 35.0%
AAACTAGATAACCAGGATTG+AGG - chr6_2:5350176-5350195 None:intergenic 35.0%
! TTATCTGAAGGAAGTGCATT+TGG + chr6_2:5350252-5350271 Msa0906690:intron 35.0%
ATCTTACTGTGTGTAATAGG+AGG + chr6_2:5350312-5350331 Msa0906690:intron 35.0%
GAGAAACTATTTAATGCAGG+AGG + chr6_2:5350353-5350372 Msa0906690:intron 35.0%
!! TGACAGTTTTATGTTGACTG+TGG + chr6_2:5350513-5350532 Msa0906690:intron 35.0%
TTTGATCTCCACAGACTTTA+CGG - chr6_2:5350825-5350844 None:intergenic 35.0%
! TCAAAGATGATCGAGTTGTA+AGG + chr6_2:5350840-5350859 Msa0906690:CDS 35.0%
! CAAAGATGATCGAGTTGTAA+GGG + chr6_2:5350841-5350860 Msa0906690:CDS 35.0%
TTGTCATCAACATTGTCTCT+TGG - chr6_2:5350965-5350984 None:intergenic 35.0%
!! AGAGACAATGTTGATGACAA+TGG + chr6_2:5350965-5350984 Msa0906690:CDS 35.0%
AGTCAATGACGTTGAAAATG+AGG + chr6_2:5351060-5351079 Msa0906690:CDS 35.0%
TGGCTACTCTCCTATTTAAA+AGG - chr6_2:5351233-5351252 None:intergenic 35.0%
!! CAGTACATTTAATTTGCCAG+AGG - chr6_2:5351359-5351378 None:intergenic 35.0%
! ATAGGTCGTGATTTTCTCTG+CGG - chr6_2:5343397-5343416 None:intergenic 40.0%
CAGAGAAAATCACGACCTAT+CGG + chr6_2:5343397-5343416 Msa0906690:CDS 40.0%
GAATCAGTCAAAGAACCCAA+CGG - chr6_2:5343520-5343539 None:intergenic 40.0%
! TTGGGTTCTTTGACTGATTC+TGG + chr6_2:5343520-5343539 Msa0906690:CDS 40.0%
GTTATGCTGAAGATTGGAAG+AGG + chr6_2:5343566-5343585 Msa0906690:CDS 40.0%
TGGAAGAGGTTTAGAGATGT+TGG + chr6_2:5343580-5343599 Msa0906690:CDS 40.0%
GAAAGATGATGAAGCGATGT+TGG + chr6_2:5343730-5343749 Msa0906690:CDS 40.0%
!! GGGTCTGTTTTTCTAGGAAT+TGG + chr6_2:5343914-5343933 Msa0906690:intron 40.0%
CGTTCAAAAACCAACTCATC+CGG - chr6_2:5343943-5343962 None:intergenic 40.0%
!!! CGGATGAGTTGGTTTTTGAA+CGG + chr6_2:5343941-5343960 Msa0906690:intron 40.0%
!!! GGATGAGTTGGTTTTTGAAC+GGG + chr6_2:5343942-5343961 Msa0906690:intron 40.0%
GAGCTATAAGTAGAGAGAGA+TGG + chr6_2:5344363-5344382 Msa0906690:intron 40.0%
GTAGAGAGAGATGGTATGAA+AGG + chr6_2:5344372-5344391 Msa0906690:intron 40.0%
! AGAGACCATATGCCTTTTGT+GGG + chr6_2:5344417-5344436 Msa0906690:intron 40.0%
GCACGAGAAATTGAATCACA+TGG - chr6_2:5344473-5344492 None:intergenic 40.0%
GGATAATCGAGAGAACTCTT+TGG + chr6_2:5344603-5344622 Msa0906690:intron 40.0%
AGTGGAGTTCCAAGTTTGAT+CGG + chr6_2:5344829-5344848 Msa0906690:CDS 40.0%
!! GTTGATCATAGGCTTTGAAC+TGG + chr6_2:5345110-5345129 Msa0906690:intron 40.0%
CATAAGAAGACAAAACCCAG+AGG - chr6_2:5345257-5345276 None:intergenic 40.0%
! TAACGATCCTGATGATGTCA+AGG - chr6_2:5345406-5345425 None:intergenic 40.0%
TTTGGAGGATACCGTACAAA+GGG + chr6_2:5345505-5345524 Msa0906690:intron 40.0%
!! CGTACAAAGGGCATTATACT+TGG + chr6_2:5345517-5345536 Msa0906690:intron 40.0%
CCAATTAATGGCAGTTTCCT+AGG - chr6_2:5345724-5345743 None:intergenic 40.0%
CCTAGGAAACTGCCATTAAT+TGG + chr6_2:5345721-5345740 Msa0906690:intron 40.0%
AAAGGGAAGATTTGAAGGAG+TGG + chr6_2:5346319-5346338 Msa0906690:CDS 40.0%
AAGGGAAGATTTGAAGGAGT+GGG + chr6_2:5346320-5346339 Msa0906690:CDS 40.0%
AGAGAGGATATGCTAAGTGA+TGG + chr6_2:5346360-5346379 Msa0906690:CDS 40.0%
AGGATATGCTAAGTGATGGT+AGG + chr6_2:5346364-5346383 Msa0906690:CDS 40.0%
AGTGATGGTAGGCAAAATCT+TGG + chr6_2:5346375-5346394 Msa0906690:CDS 40.0%
! AGAGAGAGATCTAGAAGTGT+TGG + chr6_2:5346446-5346465 Msa0906690:CDS 40.0%
AGATGTAGATGCAGAAGAGA+AGG + chr6_2:5346536-5346555 Msa0906690:CDS 40.0%
ACATGTACTCACACTTTCTC+TGG - chr6_2:5346739-5346758 None:intergenic 40.0%
! CCATAACAATGGACTTGGAT+TGG - chr6_2:5346804-5346823 None:intergenic 40.0%
CCAATCCAAGTCCATTGTTA+TGG + chr6_2:5346801-5346820 Msa0906690:intron 40.0%
! CCAAACCATAACAATGGACT+TGG - chr6_2:5346809-5346828 None:intergenic 40.0%
CCAAGTCCATTGTTATGGTT+TGG + chr6_2:5346806-5346825 Msa0906690:intron 40.0%
GCAACTCCAAACCATAACAA+TGG - chr6_2:5346815-5346834 None:intergenic 40.0%
!! GGGGTGTTAATGAGTTGATT+TGG - chr6_2:5346906-5346925 None:intergenic 40.0%
TTCGATTTCCCTATACTCCA+AGG - chr6_2:5347313-5347332 None:intergenic 40.0%
GGAAATCGAAGTCAACCATA+GGG + chr6_2:5347323-5347342 Msa0906690:CDS 40.0%
! TTGCTCTTCTTTTCCAACCT+TGG - chr6_2:5347352-5347371 None:intergenic 40.0%
! AGGAGAAATTGCTTGCTGAT+CGG + chr6_2:5347493-5347512 Msa0906690:CDS 40.0%
GCTTCAAATTCTCAGTCTCT+TGG - chr6_2:5347593-5347612 None:intergenic 40.0%
TGAAGCTTACTCAAGATGAG+AGG + chr6_2:5347607-5347626 Msa0906690:CDS 40.0%
! AGAGCATTCTCGTTTGCAAT+TGG + chr6_2:5347632-5347651 Msa0906690:CDS 40.0%
TGAAGGAAGCTGAAAACTTG+AGG + chr6_2:5347703-5347722 Msa0906690:CDS 40.0%
GAAGGAAGCTGAAAACTTGA+GGG + chr6_2:5347704-5347723 Msa0906690:CDS 40.0%
GGCTTAGGTTTGAGAAAGAA+TGG + chr6_2:5347733-5347752 Msa0906690:CDS 40.0%
TGAGAAAGAATGGGAAGAAC+TGG + chr6_2:5347743-5347762 Msa0906690:CDS 40.0%
TGACATTAGTGCAGAACAAC+AGG + chr6_2:5347779-5347798 Msa0906690:CDS 40.0%
AGAACAACAGGAAGTTGAGA+AGG + chr6_2:5347791-5347810 Msa0906690:CDS 40.0%
GGAGCTTGAAAAGCTTGAAT+TGG + chr6_2:5347899-5347918 Msa0906690:CDS 40.0%
TCAGAAAAGGAAAGAGGAGA+TGG + chr6_2:5348046-5348065 Msa0906690:CDS 40.0%
! ATTTTCTCTCTCTTTCCTGC+AGG - chr6_2:5348079-5348098 None:intergenic 40.0%
GAGAAAATTTCAGGAGGAGA+TGG + chr6_2:5348091-5348110 Msa0906690:CDS 40.0%
CTTGAAAGATGCTGCTGAAA+AGG + chr6_2:5348139-5348158 Msa0906690:CDS 40.0%
AAGATGCTGCTGAAAAGGAA+TGG + chr6_2:5348144-5348163 Msa0906690:CDS 40.0%
AGATGCTGCTGAAAAGGAAT+GGG + chr6_2:5348145-5348164 Msa0906690:CDS 40.0%
AGGGGATCAGATTAGAGAAT+GGG + chr6_2:5348183-5348202 Msa0906690:CDS 40.0%
AATCTTCATGCATCTCACGT+TGG - chr6_2:5348250-5348269 None:intergenic 40.0%
AATGGTTTCTTTCAGCCACA+AGG - chr6_2:5348322-5348341 None:intergenic 40.0%
TCTCAACAAGTGCGAGAAAA+TGG - chr6_2:5348340-5348359 None:intergenic 40.0%
TTACCTGACAGTAAAGAGTG+TGG + chr6_2:5348422-5348441 Msa0906690:CDS 40.0%
! TACCTGACAGTAAAGAGTGT+GGG + chr6_2:5348423-5348442 Msa0906690:CDS 40.0%
ATCTCCTCTTGAGAACTCAA+AGG + chr6_2:5348463-5348482 Msa0906690:CDS 40.0%
! TTGTCCTTTGAGTTCTCAAG+AGG - chr6_2:5348470-5348489 None:intergenic 40.0%
AAGGACAATGTTATCGCTTC+TGG + chr6_2:5348482-5348501 Msa0906690:CDS 40.0%
AAATCTTGGACGTGCATTTG+CGG - chr6_2:5348547-5348566 None:intergenic 40.0%
CAAGAACGACAAATAGCAGA+TGG + chr6_2:5348713-5348732 Msa0906690:CDS 40.0%
CATGTAGCTGTGTTCATCTA+TGG - chr6_2:5348798-5348817 None:intergenic 40.0%
CATAGATGAACACAGCTACA+TGG + chr6_2:5348796-5348815 Msa0906690:CDS 40.0%
AGCTACATGGAAAGTTTGAC+AGG + chr6_2:5348809-5348828 Msa0906690:CDS 40.0%
GCTACATGGAAAGTTTGACA+GGG + chr6_2:5348810-5348829 Msa0906690:CDS 40.0%
CTACATGGAAAGTTTGACAG+GGG + chr6_2:5348811-5348830 Msa0906690:CDS 40.0%
TACATGGAAAGTTTGACAGG+GGG + chr6_2:5348812-5348831 Msa0906690:CDS 40.0%
ACTGACTGTTGAGAATCATC+TGG - chr6_2:5348842-5348861 None:intergenic 40.0%
! CGTTTTTCCTAGGAACTCAT+TGG - chr6_2:5348951-5348970 None:intergenic 40.0%
AAGCTACTGGTAACAGTACA+AGG + chr6_2:5349038-5349057 Msa0906690:CDS 40.0%
AGACGTAAGTTTAGTCTCAG+GGG + chr6_2:5349230-5349249 Msa0906690:intron 40.0%
!! AAGCTTTATTGCCCCAAACA+AGG - chr6_2:5349256-5349275 None:intergenic 40.0%
TATGATCTGCGGGGAAAATA+TGG - chr6_2:5349798-5349817 None:intergenic 40.0%
TAGGAACAGTTATGATCTGC+GGG - chr6_2:5349808-5349827 None:intergenic 40.0%
AATCCAAACATACCCGCATT+AGG + chr6_2:5349985-5350004 Msa0906690:intron 40.0%
AATACGACAACACCTAATGC+GGG - chr6_2:5350000-5350019 None:intergenic 40.0%
ACTAGATAACCAGGATTGAG+GGG - chr6_2:5350174-5350193 None:intergenic 40.0%
!! AAGTGCATTTGGCTTTACTG+TGG + chr6_2:5350263-5350282 Msa0906690:intron 40.0%
ACTGTGTGTAATAGGAGGAA+TGG + chr6_2:5350317-5350336 Msa0906690:intron 40.0%
TTTAATGCAGGAGGATGTCA+AGG + chr6_2:5350362-5350381 Msa0906690:intron 40.0%
TTAATGCAGGAGGATGTCAA+GGG + chr6_2:5350363-5350382 Msa0906690:intron 40.0%
TTAGCACCATGCATCATTGT+CGG + chr6_2:5350437-5350456 Msa0906690:intron 40.0%
! CGTTGGATAACTCCTGTTTT+AGG - chr6_2:5350543-5350562 None:intergenic 40.0%
ATTCTATCAAACGGCATCGT+TGG - chr6_2:5350560-5350579 None:intergenic 40.0%
GCTCTTGAAAAAGAAGCTTC+TGG + chr6_2:5350710-5350729 Msa0906690:CDS 40.0%
CTTGAAAAAGAAGCTTCTGG+TGG + chr6_2:5350713-5350732 Msa0906690:CDS 40.0%
AAAAAACCCTGAAGTAGCAG+TGG + chr6_2:5350754-5350773 Msa0906690:CDS 40.0%
GTGTAGCACTTTCTTCAATG+CGG - chr6_2:5351012-5351031 None:intergenic 40.0%
!! CATTGAAGAAAGTGCTACAC+TGG + chr6_2:5351012-5351031 Msa0906690:CDS 40.0%
! AACAGCTTTTCCCTTTGCGA+GGG - chr6_2:5343473-5343492 None:intergenic 45.0%
TGATTCTGGCGATGATGTTG+TGG + chr6_2:5343534-5343553 Msa0906690:CDS 45.0%
TGTTGGACTGCTTGATGAAG+CGG + chr6_2:5343597-5343616 Msa0906690:CDS 45.0%
GTTGGAGAAGATTTCGAGAC+TGG + chr6_2:5343748-5343767 Msa0906690:CDS 45.0%
GATTTCGAGACTGGAGAAAG+AGG + chr6_2:5343757-5343776 Msa0906690:CDS 45.0%
AGTCGAATACGGACACAACA+CGG + chr6_2:5344091-5344110 Msa0906690:intron 45.0%
TGGTATGAAAGGAGTGAGCT+AGG + chr6_2:5344383-5344402 Msa0906690:intron 45.0%
GGTATGAAAGGAGTGAGCTA+GGG + chr6_2:5344384-5344403 Msa0906690:intron 45.0%
AAAGGAGTGAGCTAGGGAAT+TGG + chr6_2:5344390-5344409 Msa0906690:intron 45.0%
AAGGAGTGAGCTAGGGAATT+GGG + chr6_2:5344391-5344410 Msa0906690:intron 45.0%
! GAGAGACCATATGCCTTTTG+TGG + chr6_2:5344416-5344435 Msa0906690:intron 45.0%
AAATAACCCAGGCCCACAAA+AGG - chr6_2:5344432-5344451 None:intergenic 45.0%
GCAAGAACTAGCTGAAACTC+AGG + chr6_2:5344857-5344876 Msa0906690:CDS 45.0%
AGAACTAGCTGAAACTCAGG+AGG + chr6_2:5344860-5344879 Msa0906690:CDS 45.0%
! GTCTGAAGTCCAAAAACGAG+AGG + chr6_2:5344920-5344939 Msa0906690:CDS 45.0%
CATCGTATATGCTGGAAGTC+TGG + chr6_2:5345359-5345378 Msa0906690:intron 45.0%
GTTTGGAGGATACCGTACAA+AGG + chr6_2:5345504-5345523 Msa0906690:intron 45.0%
ATGGGAAGAAGACTGGACTT+CGG - chr6_2:5345970-5345989 None:intergenic 45.0%
GCTTTGTATGGGAAGAAGAC+TGG - chr6_2:5345977-5345996 None:intergenic 45.0%
GGTGGATGGAATTGAAGAGA+AGG + chr6_2:5346016-5346035 Msa0906690:CDS 45.0%
AGATATGAAGTTGCGAGAGC+TGG + chr6_2:5346112-5346131 Msa0906690:CDS 45.0%
TTGTCAGTAGCTACCGAGTA+TGG + chr6_2:5346167-5346186 Msa0906690:intron 45.0%
AAGATTTGAAGGAGTGGGAG+AGG + chr6_2:5346325-5346344 Msa0906690:CDS 45.0%
GGATTCTGCAAAGAAAACGC+TGG + chr6_2:5346668-5346687 Msa0906690:CDS 45.0%
GCAGCAGTTTGAGCTTGAAA+TGG + chr6_2:5347239-5347258 Msa0906690:CDS 45.0%
GGGAAATCGAAGTCAACCAT+AGG + chr6_2:5347322-5347341 Msa0906690:CDS 45.0%
AGTCAACCATAGGGAAACCA+AGG + chr6_2:5347332-5347351 Msa0906690:CDS 45.0%
AACCATAGGGAAACCAAGGT+TGG + chr6_2:5347336-5347355 Msa0906690:CDS 45.0%
TTCCAACCTTGGTTTCCCTA+TGG - chr6_2:5347341-5347360 None:intergenic 45.0%
AAAAGAGAGAGAGCTGGAGA+AGG + chr6_2:5347467-5347486 Msa0906690:CDS 45.0%
CTGAAAACTTGAGGGATGAG+AGG + chr6_2:5347712-5347731 Msa0906690:CDS 45.0%
ACAGGAAGTTGAGAAGGAGA+AGG + chr6_2:5347797-5347816 Msa0906690:CDS 45.0%
ATGGGAAGAAGTCAAGTCTG+AGG + chr6_2:5348163-5348182 Msa0906690:CDS 45.0%
TGGGAAGAAGTCAAGTCTGA+GGG + chr6_2:5348164-5348183 Msa0906690:CDS 45.0%
GAGGGGATCAGATTAGAGAA+TGG + chr6_2:5348182-5348201 Msa0906690:CDS 45.0%
TGAGAAGCTCAGGAATTGCA+AGG + chr6_2:5348355-5348374 Msa0906690:CDS 45.0%
! ACCTGACAGTAAAGAGTGTG+GGG + chr6_2:5348424-5348443 Msa0906690:CDS 45.0%
TCAAGAGGAGATGTAGGCAA+GGG - chr6_2:5348455-5348474 None:intergenic 45.0%
GAGTTCTCAAGAGGAGATGT+AGG - chr6_2:5348461-5348480 None:intergenic 45.0%
CAGGCCATTTAGATCCAGAA+TGG - chr6_2:5348514-5348533 None:intergenic 45.0%
ACGACAAATAGCAGATGGAG+TGG + chr6_2:5348718-5348737 Msa0906690:CDS 45.0%
TTCTGATACAGCACACAGAG+AGG + chr6_2:5348751-5348770 Msa0906690:CDS 45.0%
TCTGATACAGCACACAGAGA+GGG + chr6_2:5348752-5348771 Msa0906690:CDS 45.0%
TTCTCAACAGTCAGTCCCAA+AGG + chr6_2:5348847-5348866 Msa0906690:CDS 45.0%
GTCTTTGTCGACCAACCTTT+GGG - chr6_2:5348865-5348884 None:intergenic 45.0%
AGTAGCTTTCTCAGTGTGAC+TGG - chr6_2:5349026-5349045 None:intergenic 45.0%
AGTCACACTGAGAAAGCTAC+TGG + chr6_2:5349025-5349044 Msa0906690:CDS 45.0%
! CAGAATGCTGCTGATAGTGA+AGG + chr6_2:5349103-5349122 Msa0906690:CDS 45.0%
CATTCAGACAGTACAACAGC+TGG + chr6_2:5349127-5349146 Msa0906690:CDS 45.0%
! TTCTCCCCTGTAACTTGTGT+GGG - chr6_2:5349187-5349206 None:intergenic 45.0%
TCTTATTGGGAAGAGGGGAA+CGG - chr6_2:5349477-5349496 None:intergenic 45.0%
GGTGCAATCAATGAGACGAT+TGG - chr6_2:5349522-5349541 None:intergenic 45.0%
TAGAAACTGAAAGGGGGCAA+CGG - chr6_2:5349552-5349571 None:intergenic 45.0%
TGAGGTGTGGATGTAGTTCT+AGG + chr6_2:5349723-5349742 Msa0906690:intron 45.0%
CTGCGGGGAAAATATGGTTA+GGG - chr6_2:5349792-5349811 None:intergenic 45.0%
TCTGCGGGGAAAATATGGTT+AGG - chr6_2:5349793-5349812 None:intergenic 45.0%
AGGAACAGTTATGATCTGCG+GGG - chr6_2:5349807-5349826 None:intergenic 45.0%
ACACCTAATGCGGGTATGTT+TGG - chr6_2:5349991-5350010 None:intergenic 45.0%
!! TGCATTTGGCTTTACTGTGG+TGG + chr6_2:5350266-5350285 Msa0906690:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr6_2:5350605-5350624 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr6_2:5350606-5350625 None:intergenic 45.0%
TGTCTTTCTTTGAGCAGTGC+AGG + chr6_2:5350647-5350666 Msa0906690:intron 45.0%
AGGCACAGTTTCATCAACAC+AGG + chr6_2:5350667-5350686 Msa0906690:intron 45.0%
GGAGTTATCCAGCGAAACAA+AGG + chr6_2:5350688-5350707 Msa0906690:intron 45.0%
! TTCAAGAGCCTTTGTTTCGC+TGG - chr6_2:5350699-5350718 None:intergenic 45.0%
AGAAGCTTCTGGTGGTAAAC+AGG + chr6_2:5350721-5350740 Msa0906690:CDS 45.0%
GATCTCAACCGTAAAGTCTG+TGG + chr6_2:5350814-5350833 Msa0906690:CDS 45.0%
!! GAAAGTGCTACACTGGAGTA+TGG + chr6_2:5351019-5351038 Msa0906690:CDS 45.0%
CTGGAGTATGGAGATGAAGA+TGG + chr6_2:5351031-5351050 Msa0906690:CDS 45.0%
TGACGTTGAAAATGAGGACG+AGG + chr6_2:5351066-5351085 Msa0906690:CDS 45.0%
GACGTTGAAAATGAGGACGA+GGG + chr6_2:5351067-5351086 Msa0906690:CDS 45.0%
ACGTTGAAAATGAGGACGAG+GGG + chr6_2:5351068-5351087 Msa0906690:CDS 45.0%
AGATGAAGAGGAAGACGAAG+AGG + chr6_2:5351093-5351112 Msa0906690:CDS 45.0%
TTGCCAGAGGACAGTCATAA+CGG - chr6_2:5351346-5351365 None:intergenic 45.0%
AATGTACTGCTTAGGCACAG+AGG + chr6_2:5351370-5351389 Msa0906690:three_prime_UTR 45.0%
!! TAGAATAAAATTATATTATT+TGG - chr6_2:5346870-5346889 None:intergenic 5.0%
ATCACGACCTATCGGTACAC+CGG + chr6_2:5343405-5343424 Msa0906690:CDS 50.0%
! AATGATGCCGGTGTACCGAT+AGG - chr6_2:5343415-5343434 None:intergenic 50.0%
TCATTCACACCGCGTCGAAT+TGG + chr6_2:5343430-5343449 Msa0906690:CDS 50.0%
ACCTAAATCTGCCCTCGCAA+AGG + chr6_2:5343459-5343478 Msa0906690:CDS 50.0%
CCTAAATCTGCCCTCGCAAA+GGG + chr6_2:5343460-5343479 Msa0906690:CDS 50.0%
! CAACAGCTTTTCCCTTTGCG+AGG - chr6_2:5343474-5343493 None:intergenic 50.0%
TCAGTCAAAGAACCCAACGG+CGG - chr6_2:5343517-5343536 None:intergenic 50.0%
TTCTGGCGATGATGTTGTGG+TGG + chr6_2:5343537-5343556 Msa0906690:CDS 50.0%
! GAATTGGTCTCCGGATGAGT+TGG + chr6_2:5343930-5343949 Msa0906690:intron 50.0%
CGGAACTAGGAAACGTACAC+AGG + chr6_2:5344341-5344360 Msa0906690:intron 50.0%
AGGAGTGAGCTAGGGAATTG+GGG + chr6_2:5344392-5344411 Msa0906690:intron 50.0%
! CATATGCCTTTTGTGGGCCT+GGG + chr6_2:5344423-5344442 Msa0906690:intron 50.0%
GTTCCAAGTTTGATCGGCTG+AGG + chr6_2:5344835-5344854 Msa0906690:CDS 50.0%
TTGCCTCAGCCGATCAAACT+TGG - chr6_2:5344841-5344860 None:intergenic 50.0%
AACTGCATGATGCAGAAGCC+AGG + chr6_2:5346057-5346076 Msa0906690:CDS 50.0%
TATGAAGTTGCGAGAGCTGG+AGG + chr6_2:5346115-5346134 Msa0906690:CDS 50.0%
!! ACCTCAAAGGTACTAGGCAG+GGG - chr6_2:5346925-5346944 None:intergenic 50.0%
!! GACCTCAAAGGTACTAGGCA+GGG - chr6_2:5346926-5346945 None:intergenic 50.0%
!! TGACCTCAAAGGTACTAGGC+AGG - chr6_2:5346927-5346946 None:intergenic 50.0%
AAAGCGGAAATCTCTCGCTG+AGG + chr6_2:5347266-5347285 Msa0906690:CDS 50.0%
TGAGGAGTTTAGCAGCAAGG+AGG + chr6_2:5347284-5347303 Msa0906690:CDS 50.0%
GAGAGAGCTGGAGAAGGAAA+AGG + chr6_2:5347473-5347492 Msa0906690:CDS 50.0%
! GCTTGCTGATCGGAAGAGTT+TGG + chr6_2:5347503-5347522 Msa0906690:CDS 50.0%
ACTTGAGGGATGAGAGGCTT+AGG + chr6_2:5347718-5347737 Msa0906690:CDS 50.0%
GGGAAGAAGTCAAGTCTGAG+GGG + chr6_2:5348165-5348184 Msa0906690:CDS 50.0%
GAAAGAACGTGAACGCCTTG+TGG + chr6_2:5348304-5348323 Msa0906690:CDS 50.0%
! TCGCACTTGTTGAGAAGCTC+AGG + chr6_2:5348345-5348364 Msa0906690:CDS 50.0%
ACCCCACACTCTTTACTGTC+AGG - chr6_2:5348428-5348447 None:intergenic 50.0%
CTCAAGAGGAGATGTAGGCA+AGG - chr6_2:5348456-5348475 None:intergenic 50.0%
!! GCTTCTGGCTCAAACCATTC+TGG + chr6_2:5348497-5348516 Msa0906690:CDS 50.0%
CATTTGCGGAACACAGACAC+AGG - chr6_2:5348533-5348552 None:intergenic 50.0%
CTGATACAGCACACAGAGAG+GGG + chr6_2:5348753-5348772 Msa0906690:CDS 50.0%
ATGGAAAGTTTGACAGGGGG+AGG + chr6_2:5348815-5348834 Msa0906690:CDS 50.0%
CAACAGTCAGTCCCAAAGGT+TGG + chr6_2:5348851-5348870 Msa0906690:CDS 50.0%
GGTCTTTGTCGACCAACCTT+TGG - chr6_2:5348866-5348885 None:intergenic 50.0%
! AAGGTTGGTCGACAAAGACC+TGG + chr6_2:5348866-5348885 Msa0906690:CDS 50.0%
! AGGTTGGTCGACAAAGACCT+GGG + chr6_2:5348867-5348886 Msa0906690:CDS 50.0%
!! CCAGATTTGCTTTTCCTCCC+AGG - chr6_2:5348887-5348906 None:intergenic 50.0%
CCTGGGAGGAAAAGCAAATC+TGG + chr6_2:5348884-5348903 Msa0906690:CDS 50.0%
TGCTAGAACACGCTCAGTGA+AGG + chr6_2:5348910-5348929 Msa0906690:CDS 50.0%
CTCAGTGAAGGCTGTGGTTA+AGG + chr6_2:5348922-5348941 Msa0906690:CDS 50.0%
AGTGAAGGCTGTGGTTAAGG+AGG + chr6_2:5348925-5348944 Msa0906690:CDS 50.0%
AAGGAGGCCAATGAGTTCCT+AGG + chr6_2:5348941-5348960 Msa0906690:CDS 50.0%
TCAGACAGTACAACAGCTGG+TGG + chr6_2:5349130-5349149 Msa0906690:CDS 50.0%
CAGACAGTACAACAGCTGGT+GGG + chr6_2:5349131-5349150 Msa0906690:CDS 50.0%
CTCCACCCACACAAGTTACA+GGG + chr6_2:5349179-5349198 Msa0906690:CDS 50.0%
TCCACCCACACAAGTTACAG+GGG + chr6_2:5349180-5349199 Msa0906690:CDS 50.0%
! CTTCTCCCCTGTAACTTGTG+TGG - chr6_2:5349188-5349207 None:intergenic 50.0%
!! AGAAGCGTTACAACCTCAGG+CGG + chr6_2:5349203-5349222 Msa0906690:CDS 50.0%
!! TTAGTCTCAGGGGCCTTGTT+TGG + chr6_2:5349240-5349259 Msa0906690:intron 50.0%
!! TAGTCTCAGGGGCCTTGTTT+GGG + chr6_2:5349241-5349260 Msa0906690:intron 50.0%
CTTATTGGGAAGAGGGGAAC+GGG - chr6_2:5349476-5349495 None:intergenic 50.0%
AGAAACTGAAAGGGGGCAAC+GGG - chr6_2:5349551-5349570 None:intergenic 50.0%
TAATTGCAGCCCCTCAATCC+TGG + chr6_2:5350162-5350181 Msa0906690:intron 50.0%
CCACAACCGACAATGATGCA+TGG - chr6_2:5350446-5350465 None:intergenic 50.0%
! CCATGCATCATTGTCGGTTG+TGG + chr6_2:5350443-5350462 Msa0906690:intron 50.0%
! CATCATTGTCGGTTGTGGTC+TGG + chr6_2:5350448-5350467 Msa0906690:intron 50.0%
! GACTGTGGACTGCCTAAAAC+AGG + chr6_2:5350528-5350547 Msa0906690:intron 50.0%
TTGAGCTGACCCCACTTAGT+GGG + chr6_2:5350593-5350612 Msa0906690:intron 50.0%
TGACCCCACTTAGTGGGATA+AGG + chr6_2:5350599-5350618 Msa0906690:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr6_2:5350607-5350626 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr6_2:5350604-5350623 Msa0906690:intron 50.0%
AGCTTCTGGTGGTAAACAGG+AGG + chr6_2:5350724-5350743 Msa0906690:CDS 50.0%
! CAGCTACCACTGCTACTTCA+GGG - chr6_2:5350763-5350782 None:intergenic 50.0%
! TCAGCTACCACTGCTACTTC+AGG - chr6_2:5350764-5350783 None:intergenic 50.0%
TCTGCACTAGAGTCGTGGTT+TGG - chr6_2:5350796-5350815 None:intergenic 50.0%
TGAGATCTGCACTAGAGTCG+TGG - chr6_2:5350801-5350820 None:intergenic 50.0%
!! TGGTGCTACAACCAACTCTG+TGG + chr6_2:5350985-5351004 Msa0906690:CDS 50.0%
TTCAATGCGGTCCACAGAGT+TGG - chr6_2:5350999-5351018 None:intergenic 50.0%
CGTTGAAAATGAGGACGAGG+GGG + chr6_2:5351069-5351088 Msa0906690:CDS 50.0%
TGAAGAGGAAGACGAAGAGG+AGG + chr6_2:5351096-5351115 Msa0906690:CDS 50.0%
TTTCCGATAGACACCTCACC+GGG - chr6_2:5351130-5351149 None:intergenic 50.0%
CTTTCCGATAGACACCTCAC+CGG - chr6_2:5351131-5351150 None:intergenic 50.0%
TGTCCGTTATGACTGTCCTC+TGG + chr6_2:5351340-5351359 Msa0906690:three_prime_UTR 50.0%
TGCGAGGGCAGATTTAGGTG+TGG - chr6_2:5343458-5343477 None:intergenic 55.0%
CCCTTTGCGAGGGCAGATTT+AGG - chr6_2:5343463-5343482 None:intergenic 55.0%
GGAGTGAGCTAGGGAATTGG+GGG + chr6_2:5344393-5344412 Msa0906690:intron 55.0%
GAGTGAGCTAGGGAATTGGG+GGG + chr6_2:5344394-5344413 Msa0906690:intron 55.0%
! CCAGGCCCACAAAAGGCATA+TGG - chr6_2:5344425-5344444 None:intergenic 55.0%
! CCATATGCCTTTTGTGGGCC+TGG + chr6_2:5344422-5344441 Msa0906690:intron 55.0%
! AGAGTACCACTCAGCTCCTC+TGG + chr6_2:5345238-5345257 Msa0906690:intron 55.0%
GAGTACCACTCAGCTCCTCT+GGG + chr6_2:5345239-5345258 Msa0906690:intron 55.0%
CAAAACCCAGAGGAGCTGAG+TGG - chr6_2:5345247-5345266 None:intergenic 55.0%
CCTGTTTACCTCAGCAAGCC+TGG - chr6_2:5346078-5346097 None:intergenic 55.0%
!! CCAGGCTTGCTGAGGTAAAC+AGG + chr6_2:5346075-5346094 Msa0906690:CDS 55.0%
AGGAGTGGGAGAGGAAGCTA+CGG + chr6_2:5346334-5346353 Msa0906690:CDS 55.0%
GAGGAAGCTACGGCAAAGAG+AGG + chr6_2:5346344-5346363 Msa0906690:CDS 55.0%
ACCCCTGCCTAGTACCTTTG+AGG + chr6_2:5346921-5346940 Msa0906690:intron 55.0%
CGCTGAGGAGTTTAGCAGCA+AGG + chr6_2:5347281-5347300 Msa0906690:CDS 55.0%
GGAGTTTAGCAGCAAGGAGG+AGG + chr6_2:5347287-5347306 Msa0906690:CDS 55.0%
AGGAGGAGGCCTTGGAGTAT+AGG + chr6_2:5347301-5347320 Msa0906690:CDS 55.0%
GGAGGAGGCCTTGGAGTATA+GGG + chr6_2:5347302-5347321 Msa0906690:CDS 55.0%
GGAGATGGAGAAAGACCTGC+AGG + chr6_2:5348061-5348080 Msa0906690:CDS 55.0%
TTGGTCGACAAAGACCTGGG+AGG + chr6_2:5348870-5348889 Msa0906690:CDS 55.0%
AACACGCTCAGTGAAGGCTG+TGG + chr6_2:5348916-5348935 Msa0906690:CDS 55.0%
! CTGGTGGGCGCAAGAAGAAA+AGG + chr6_2:5349146-5349165 Msa0906690:CDS 55.0%
GCTCCACCCACACAAGTTAC+AGG + chr6_2:5349178-5349197 Msa0906690:CDS 55.0%
! TCCCCTGTAACTTGTGTGGG+TGG - chr6_2:5349184-5349203 None:intergenic 55.0%
!! GGGAGAAGCGTTACAACCTC+AGG + chr6_2:5349200-5349219 Msa0906690:CDS 55.0%
CTTACGTCTTATGCCGCCTG+AGG - chr6_2:5349219-5349238 None:intergenic 55.0%
!! AGTCTCAGGGGCCTTGTTTG+GGG + chr6_2:5349242-5349261 Msa0906690:intron 55.0%
AAAGGGGGCAACGGGACAAT+TGG - chr6_2:5349543-5349562 None:intergenic 55.0%
AGTGGGGTCAGCTCAAGGAA+AGG - chr6_2:5350589-5350608 None:intergenic 55.0%
CACTAAGTGGGGTCAGCTCA+AGG - chr6_2:5350594-5350613 None:intergenic 55.0%
CTTGAGCTGACCCCACTTAG+TGG + chr6_2:5350592-5350611 Msa0906690:intron 55.0%
TCTGGTGGTAAACAGGAGGC+AGG + chr6_2:5350728-5350747 Msa0906690:CDS 55.0%
AGAGGAAGACGAAGAGGAGG+AGG + chr6_2:5351099-5351118 Msa0906690:CDS 55.0%
! GATCCCGGTGAGGTGTCTAT+CGG + chr6_2:5351124-5351143 Msa0906690:CDS 55.0%
CGACGCGGTGTGAATGATGC+CGG - chr6_2:5343427-5343446 None:intergenic 60.0%
GGTGTGGCACCAATTCGACG+CGG - chr6_2:5343442-5343461 None:intergenic 60.0%
GTCAAAGAACCCAACGGCGG+CGG - chr6_2:5343514-5343533 None:intergenic 60.0%
!! TGCAGAAGCCAGGCTTGCTG+AGG + chr6_2:5346067-5346086 Msa0906690:CDS 60.0%
TAGCAGCAAGGAGGAGGCCT+TGG + chr6_2:5347293-5347312 Msa0906690:CDS 60.0%
GGACGAGGGGGAAGATGAAG+AGG + chr6_2:5351081-5351100 Msa0906690:CDS 60.0%
GGAAGACGAAGAGGAGGAGG+AGG + chr6_2:5351102-5351121 Msa0906690:CDS 60.0%
GAAGAGGAGGAGGAGGATCC+CGG + chr6_2:5351109-5351128 Msa0906690:CDS 60.0%
CAACGGCGGCGGAGGTTCAT+CGG - chr6_2:5343503-5343522 None:intergenic 65.0%
GATGAACCTCCGCCGCCGTT+GGG + chr6_2:5343502-5343521 Msa0906690:CDS 65.0%
AAAGAACCCAACGGCGGCGG+AGG - chr6_2:5343511-5343530 None:intergenic 65.0%
CGATGAACCTCCGCCGCCGT+TGG + chr6_2:5343501-5343520 Msa0906690:CDS 70.0%
GGAGGAGGAGGATCCCGGTG+AGG + chr6_2:5351114-5351133 Msa0906690:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 5343385 5351451 5343385 ID=Msa0906690;Name=Msa0906690
chr6_2 mRNA 5343385 5351451 5343385 ID=Msa0906690-mRNA-1;Parent=Msa0906690;Name=Msa0906690-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.75|0.66|1|0.75|0.88|9|274|1179
chr6_2 exon 5343385 5343618 5343385 ID=Msa0906690-mRNA-1:exon:1580;Parent=Msa0906690-mRNA-1
chr6_2 exon 5343728 5343778 5343728 ID=Msa0906690-mRNA-1:exon:1581;Parent=Msa0906690-mRNA-1
chr6_2 exon 5344780 5344989 5344780 ID=Msa0906690-mRNA-1:exon:1582;Parent=Msa0906690-mRNA-1
chr6_2 exon 5345930 5346183 5345930 ID=Msa0906690-mRNA-1:exon:1583;Parent=Msa0906690-mRNA-1
chr6_2 exon 5346287 5346557 5346287 ID=Msa0906690-mRNA-1:exon:1584;Parent=Msa0906690-mRNA-1
chr6_2 exon 5346663 5346746 5346663 ID=Msa0906690-mRNA-1:exon:1585;Parent=Msa0906690-mRNA-1
chr6_2 exon 5347186 5349233 5347186 ID=Msa0906690-mRNA-1:exon:1586;Parent=Msa0906690-mRNA-1
chr6_2 exon 5350700 5350862 5350700 ID=Msa0906690-mRNA-1:exon:1587;Parent=Msa0906690-mRNA-1
chr6_2 exon 5350953 5351451 5350953 ID=Msa0906690-mRNA-1:exon:1588;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5343385 5343618 5343385 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5343728 5343778 5343728 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5344780 5344989 5344780 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5345930 5346183 5345930 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5346287 5346557 5346287 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5346663 5346746 5346663 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5347186 5349233 5347186 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5350700 5350862 5350700 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 CDS 5350953 5351177 5350953 ID=Msa0906690-mRNA-1:cds;Parent=Msa0906690-mRNA-1
chr6_2 three_prime_UTR 5351178 5351451 5351178 ID=Msa0906690-mRNA-1:three_prime_utr;Parent=Msa0906690-mRNA-1
Gene Sequence

>Msa0906690

ATGTTCACGCCGCAGAGAAAATCACGACCTATCGGTACACCGGCATCATTCACACCGCGTCGAATTGGTGCCACACCTAAATCTGCCCTCGCAAAGGGAAAAGCTGTTGTCATCGCCGATGAACCTCCGCCGCCGTTGGGTTCTTTGACTGATTCTGGCGATGATGTTGTGGTGGCTTCTAGTTATGCTGAAGATTGGAAGAGGTTTAGAGATGTTGGACTGCTTGATGAAGCGAGGAAAGATGATGAAGCGATGTTGGAGAAGATTTCGAGACTGGAGAAAGAGCTTTATGATTATCAGTACAACATGGGTCTCCTTCTTATTGAGAAGCAAGAGTGGAGTTCCAAGTTTGATCGGCTGAGGCAAGAACTAGCTGAAACTCAGGAGGTTCTAAAACGAGATCAATCATCGCATTTGATTGCATTGTCTGAAGTCCAAAAACGAGAGGAAAATTTGAGGAAAGCTTTGAGTTTAGAAAAGCAGTGTGGAGCTGATCTTGAGAGAGCTTTGCGTGCAATGCAAGAAGAGCTTGCCGAAGTCCAGTCTTCTTCCCATACAAAGCTAGATAAAGCAAATGAATTGGTGGATGGAATTGAAGAGAAGGCTTCAACAGTTAACAAGAAACTGCATGATGCAGAAGCCAGGCTTGCTGAGGTAAACAGGAAAAATACAGAGCTAGATATGAAGTTGCGAGAGCTGGAGGTTCGTGAAAGTTTGCTTCAAAAGGAGCGGTTGTCAGTAGCTACCGATCGAGAATCGTTTGAATCAGTATTCTACAAACAAAGGGAAGATTTGAAGGAGTGGGAGAGGAAGCTACGGCAAAGAGAGGATATGCTAAGTGATGGTAGGCAAAATCTTGGTGAGAAAGAAAAGAATGTGACTGAAACAGAAAAAAAGCTGAAGCAGAAAGAGAGAGATCTAGAAGTGTTGGAGAAGAATATTAACTCATCTAATTCTTTATTAAAAGAAAAGGAAGCTGAGATGAGTAGAAGAGTAGCAGATGTAGATGCAGAAGAGAAGAAAGTGGATTCTGCAAAGAAAACGCTGGATATTAAAGAGAAAGAATTACATGAACTGGAACTAAAGCTTAGTGCCAGAGAAAGTGAAGGGATCCAGAAACTTCTTGATGAGCAAAAACATACTCTGGATTTAAAGTTGCAGCAGTTTGAGCTTGAAATGGAACAAAAGCGGAAATCTCTCGCTGAGGAGTTTAGCAGCAAGGAGGAGGCCTTGGAGTATAGGGAAATCGAAGTCAACCATAGGGAAACCAAGGTTGGAAAAGAAGAGCAAGCTTTGAGTACGAAGTCTGAGAGAATAAAGGAGCAAGATAAGGAACTTTTAACAAAGTTGAAATCATTGAAGGAGGAAGAAAAGACTATGAAAATAAAAGAGAGAGAGCTGGAGAAGGAAAAGGAGAAATTGCTTGCTGATCGGAAGAGTTTGGAGAATTTAAATGCTGAACTTGGGAAGCTTAAAGCTGAGATTTCTCAGCAGAAGCTGCAAATATGCCAAGAGACTGAGAATTTGAAGCTTACTCAAGATGAGAGGTCAGAGCATTCTCGTTTGCAATTGGAACTAAAGCAGGAGATAGAGCATACGAGAACGCAGAAAGATTTAATTATGAAGGAAGCTGAAAACTTGAGGGATGAGAGGCTTAGGTTTGAGAAAGAATGGGAAGAACTGGATAAGAAAAGAGCTGACATTAGTGCAGAACAACAGGAAGTTGAGAAGGAGAAGGAAAAGTTAAGAAAACTGAAGAACAGTGAAGAAGAAAGGTTGAAAAGAGAGAAGCAAGATATGGAAGATAATTTAAAGAAGGAGCTTGAAAAGCTTGAATTGGATAAGAAATCATTTAGTGATTCAATTAAACAAGAGGAATTTCTTTTATCTGAAAAGGTAAAAAATGAAAAGGCACAAATGGTTCAAGATTTTGAATGGAAAACAAGAAATCTTGAGAATGAAATTCAGAAAAGGAAAGAGGAGATGGAGAAAGACCTGCAGGAAAGAGAGAGAAAATTTCAGGAGGAGATGGAAAAAGAGCTTAATAATATTAATATCTTGAAAGATGCTGCTGAAAAGGAATGGGAAGAAGTCAAGTCTGAGGGGATCAGATTAGAGAATGGGAGAAAAGAACTCGAGACAAACAAGCAACAGCTGAAGTCTGACCAACGTGAGATGCATGAAGATTCTGAAATGCTTATGAATCTTAGCCAGAAAGTAAAGAAAGAACGTGAACGCCTTGTGGCTGAAAGAAACCATTTTCTCGCACTTGTTGAGAAGCTCAGGAATTGCAAGGACTGTGGGGAAGTTGTCAGGGACGTTGTTGTGTCTGATCTTCAGTTACCTGACAGTAAAGAGTGTGGGGTTCTTCCCTTGCCTACATCTCCTCTTGAGAACTCAAAGGACAATGTTATCGCTTCTGGCTCAAACCATTCTGGATCTAAATGGCCTGTGTCTGTGTTCCGCAAATGCACGTCCAAGATTTTCAGTTTATCCCCTAGTACTAACACAGATTCTATTGGTACTTCAAATATAGCTGGGACGTCCCCTGAGTCTGATGTAAATGTTAATATAGAAAAAGTAGGAGAGCCTGTGTCATCTCCTAATATAGAAGGACCGATAGTTACTCTTCAAGAACGACAAATAGCAGATGGAGTGGCTTTTCACTCTTCTGATACAGCACACAGAGAGGGGAATACTGAATATTCTTTATCCATAGATGAACACAGCTACATGGAAAGTTTGACAGGGGGAGGTCCAGATGATTCTCAACAGTCAGTCCCAAAGGTTGGTCGACAAAGACCTGGGAGGAAAAGCAAATCTGGAATTGCTAGAACACGCTCAGTGAAGGCTGTGGTTAAGGAGGCCAATGAGTTCCTAGGAAAAACGAGTTTGCAAAATCTTGATACTGATCATATCAAAGAAAATAGTCATGAAGAGTCCAGTCACACTGAGAAAGCTACTGGTAACAGTACAAGGAAGCGACAACGTGCACAAACTTCTAAGATTGCTGAAGGTGAGCAGAATGCTGCTGATAGTGAAGGACATTCAGACAGTACAACAGCTGGTGGGCGCAAGAAGAAAAGGTCAACAGTTGCTCCACCCACACAAGTTACAGGGGAGAAGCGTTACAACCTCAGGCGGCATAAGACCGAAACAAAGGCTCTTGAAAAAGAAGCTTCTGGTGGTAAACAGGAGGCAGGTGAAAAAAACCCTGAAGTAGCAGTGGTAGCTGATGACAATATCCAAACCACGACTCTAGTGCAGATCTCAACCGTAAAGTCTGTGGAGATCAAAGATGATCGAGTTGTAAGGTTTGAAATACCAAGAGACAATGTTGATGACAATGGTGCTACAACCAACTCTGTGGACCGCATTGAAGAAAGTGCTACACTGGAGTATGGAGATGAAGATGGAAGCATAGTCAATGACGTTGAAAATGAGGACGAGGGGGAAGATGAAGAGGAAGACGAAGAGGAGGAGGAGGATCCCGGTGAGGTGTCTATCGGAAAGAAGATCTTCAAATTTTTCACAACATGA
Protein sequence

>Msa0906690

MFTPQRKSRPIGTPASFTPRRIGATPKSALAKGKAVVIADEPPPPLGSLTDSGDDVVVASSYAEDWKRFRDVGLLDEARKDDEAMLEKISRLEKELYDYQYNMGLLLIEKQEWSSKFDRLRQELAETQEVLKRDQSSHLIALSEVQKREENLRKALSLEKQCGADLERALRAMQEELAEVQSSSHTKLDKANELVDGIEEKASTVNKKLHDAEARLAEVNRKNTELDMKLRELEVRESLLQKERLSVATDRESFESVFYKQREDLKEWERKLRQREDMLSDGRQNLGEKEKNVTETEKKLKQKERDLEVLEKNINSSNSLLKEKEAEMSRRVADVDAEEKKVDSAKKTLDIKEKELHELELKLSARESEGIQKLLDEQKHTLDLKLQQFELEMEQKRKSLAEEFSSKEEALEYREIEVNHRETKVGKEEQALSTKSERIKEQDKELLTKLKSLKEEEKTMKIKERELEKEKEKLLADRKSLENLNAELGKLKAEISQQKLQICQETENLKLTQDERSEHSRLQLELKQEIEHTRTQKDLIMKEAENLRDERLRFEKEWEELDKKRADISAEQQEVEKEKEKLRKLKNSEEERLKREKQDMEDNLKKELEKLELDKKSFSDSIKQEEFLLSEKVKNEKAQMVQDFEWKTRNLENEIQKRKEEMEKDLQERERKFQEEMEKELNNINILKDAAEKEWEEVKSEGIRLENGRKELETNKQQLKSDQREMHEDSEMLMNLSQKVKKERERLVAERNHFLALVEKLRNCKDCGEVVRDVVVSDLQLPDSKECGVLPLPTSPLENSKDNVIASGSNHSGSKWPVSVFRKCTSKIFSLSPSTNTDSIGTSNIAGTSPESDVNVNIEKVGEPVSSPNIEGPIVTLQERQIADGVAFHSSDTAHREGNTEYSLSIDEHSYMESLTGGGPDDSQQSVPKVGRQRPGRKSKSGIARTRSVKAVVKEANEFLGKTSLQNLDTDHIKENSHEESSHTEKATGNSTRKRQRAQTSKIAEGEQNAADSEGHSDSTTAGGRKKKRSTVAPPTQVTGEKRYNLRRHKTETKALEKEASGGKQEAGEKNPEVAVVADDNIQTTTLVQISTVKSVEIKDDRVVRFEIPRDNVDDNGATTNSVDRIEESATLEYGDEDGSIVNDVENEDEGEDEEEDEEEEEDPGEVSIGKKIFKFFTT*