Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435890 | XP_024639466.1 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435890 | sp|F4K4Y5|DEKP4_ARATH | 52.261 | 199 | 78 | 4 | 365 | 558 | 301 | 487 | 5.52e-52 | 199 |
| Msa1435890 | sp|F4K4Y5|DEKP4_ARATH | 41.361 | 191 | 105 | 3 | 763 | 948 | 554 | 742 | 4.33e-23 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435890 | A0A396HZU8 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa1435890 | 0.800546 | 1.369929e-48 | -8.615850e-47 |
| Msa0020930 | Msa1435890 | 0.858669 | 7.030284e-63 | -8.615850e-47 |
| Msa0031340 | Msa1435890 | 0.829420 | 5.198472e-55 | -8.615850e-47 |
| Msa0032920 | Msa1435890 | -0.824724 | 6.911497e-54 | -8.615850e-47 |
| Msa0032960 | Msa1435890 | -0.831977 | 1.229102e-55 | -8.615850e-47 |
| Msa0045790 | Msa1435890 | 0.823912 | 1.073019e-53 | -8.615850e-47 |
| Msa0046160 | Msa1435890 | 0.827082 | 1.904299e-54 | -8.615850e-47 |
| Msa0068680 | Msa1435890 | 0.849159 | 3.867901e-60 | -8.615850e-47 |
| Msa0075360 | Msa1435890 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0078650 | Msa1435890 | 0.823871 | 1.096621e-53 | -8.615850e-47 |
| Msa0094120 | Msa1435890 | 0.815117 | 1.089361e-51 | -8.615850e-47 |
| Msa0114060 | Msa1435890 | 0.834074 | 3.698090e-56 | -8.615850e-47 |
| Msa1356140 | Msa1435890 | 0.819800 | 9.603340e-53 | -8.615850e-47 |
| Msa1366600 | Msa1435890 | 0.825438 | 4.686799e-54 | -8.615850e-47 |
| Msa1374040 | Msa1435890 | 0.803000 | 4.296159e-49 | -8.615850e-47 |
| Msa1398340 | Msa1435890 | 0.868821 | 4.909054e-66 | -8.615850e-47 |
| Msa1409700 | Msa1435890 | 0.838753 | 2.384529e-57 | -8.615850e-47 |
| Msa1409870 | Msa1435890 | 0.804338 | 2.266649e-49 | -8.615850e-47 |
| Msa1435890 | Msa1436480 | 0.828871 | 7.063674e-55 | -8.615850e-47 |
| Msa1435890 | Msa1440960 | 0.800866 | 1.178774e-48 | -8.615850e-47 |
| Msa1435890 | Msa1442820 | 0.801956 | 7.048313e-49 | -8.615850e-47 |
| Msa1435890 | Msa1457440 | 0.805205 | 1.493802e-49 | -8.615850e-47 |
| Msa1435890 | Msa1457910 | 0.809113 | 2.221838e-50 | -8.615850e-47 |
| Msa1435890 | Msa1460020 | 0.850489 | 1.643383e-60 | -8.615850e-47 |
| Msa1435890 | Msa1464810 | 0.832064 | 1.169809e-55 | -8.615850e-47 |
| Msa0606720 | Msa1435890 | 0.817150 | 3.829206e-52 | -8.615850e-47 |
| Msa0606730 | Msa1435890 | 0.804283 | 2.327013e-49 | -8.615850e-47 |
| Msa0616160 | Msa1435890 | 0.808957 | 2.399383e-50 | -8.615850e-47 |
| Msa0626450 | Msa1435890 | 0.818434 | 1.964061e-52 | -8.615850e-47 |
| Msa0626490 | Msa1435890 | 0.823215 | 1.561572e-53 | -8.615850e-47 |
| Msa0627450 | Msa1435890 | 0.830320 | 3.139182e-55 | -8.615850e-47 |
| Msa0638050 | Msa1435890 | 0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa0639430 | Msa1435890 | 0.804216 | 2.403047e-49 | -8.615850e-47 |
| Msa0655560 | Msa1435890 | 0.806841 | 6.761942e-50 | -8.615850e-47 |
| Msa0662340 | Msa1435890 | 0.827148 | 1.835744e-54 | -8.615850e-47 |
| Msa0664600 | Msa1435890 | 0.813234 | 2.837979e-51 | -8.615850e-47 |
| Msa0677410 | Msa1435890 | 0.813649 | 2.299590e-51 | -8.615850e-47 |
| Msa0682330 | Msa1435890 | 0.819229 | 1.295858e-52 | -8.615850e-47 |
| Msa0683510 | Msa1435890 | 0.813507 | 2.471308e-51 | -8.615850e-47 |
| Msa0683570 | Msa1435890 | 0.801009 | 1.102066e-48 | -8.615850e-47 |
| Msa0689520 | Msa1435890 | 0.811787 | 5.879367e-51 | -8.615850e-47 |
| Msa0702830 | Msa1435890 | 0.824501 | 7.800782e-54 | -8.615850e-47 |
| Msa0730430 | Msa1435890 | 0.814465 | 1.519696e-51 | -8.615850e-47 |
| Msa0740510 | Msa1435890 | 0.816553 | 5.212725e-52 | -8.615850e-47 |
| Msa0744000 | Msa1435890 | 0.998417 | 1.830153e-264 | -8.615850e-47 |
| Msa0744030 | Msa1435890 | 0.816432 | 5.545927e-52 | -8.615850e-47 |
| Msa0744040 | Msa1435890 | 0.813444 | 2.552255e-51 | -8.615850e-47 |
| Msa0756290 | Msa1435890 | 0.810822 | 9.520969e-51 | -8.615850e-47 |
| Msa0767300 | Msa1435890 | 0.839224 | 1.800683e-57 | -8.615850e-47 |
| Msa0770720 | Msa1435890 | 0.804486 | 2.111116e-49 | -8.615850e-47 |
| Msa0787930 | Msa1435890 | 0.866932 | 1.985423e-65 | -8.615850e-47 |
| Msa0820770 | Msa1435890 | 0.816071 | 6.678453e-52 | -8.615850e-47 |
| Msa0824960 | Msa1435890 | 0.894250 | 2.943213e-75 | -8.615850e-47 |
| Msa0126370 | Msa1435890 | 0.809540 | 1.799228e-50 | -8.615850e-47 |
| Msa0146260 | Msa1435890 | 0.802100 | 6.584040e-49 | -8.615850e-47 |
| Msa0159930 | Msa1435890 | 0.862640 | 4.391496e-64 | -8.615850e-47 |
| Msa0171290 | Msa1435890 | 0.851710 | 7.431531e-61 | -8.615850e-47 |
| Msa0183050 | Msa1435890 | 0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0189320 | Msa1435890 | 0.817933 | 2.550153e-52 | -8.615850e-47 |
| Msa0205850 | Msa1435890 | 0.816442 | 5.519138e-52 | -8.615850e-47 |
| Msa0211150 | Msa1435890 | 0.800967 | 1.124212e-48 | -8.615850e-47 |
| Msa0216240 | Msa1435890 | 0.802434 | 5.620508e-49 | -8.615850e-47 |
| Msa0220580 | Msa1435890 | 0.812259 | 4.638675e-51 | -8.615850e-47 |
| Msa0223690 | Msa1435890 | 0.800510 | 1.393016e-48 | -8.615850e-47 |
| Msa0225740 | Msa1435890 | 0.818677 | 1.730561e-52 | -8.615850e-47 |
| Msa0231650 | Msa1435890 | 0.807722 | 4.398910e-50 | -8.615850e-47 |
| Msa1255330 | Msa1435890 | 0.802183 | 6.329852e-49 | -8.615850e-47 |
| Msa1279380 | Msa1435890 | 0.823520 | 1.325350e-53 | -8.615850e-47 |
| Msa1279400 | Msa1435890 | 0.804467 | 2.130212e-49 | -8.615850e-47 |
| Msa1292830 | Msa1435890 | 0.806414 | 8.322442e-50 | -8.615850e-47 |
| Msa1295910 | Msa1435890 | 0.842887 | 1.965516e-58 | -8.615850e-47 |
| Msa1328710 | Msa1435890 | 0.831093 | 2.029337e-55 | -8.615850e-47 |
| Msa1335540 | Msa1435890 | 0.822750 | 2.004006e-53 | -8.615850e-47 |
| Msa0366240 | Msa1435890 | 0.817752 | 2.802332e-52 | -8.615850e-47 |
| Msa0369850 | Msa1435890 | 0.822595 | 2.177414e-53 | -8.615850e-47 |
| Msa0370380 | Msa1435890 | 0.827462 | 1.543885e-54 | -8.615850e-47 |
| Msa0376350 | Msa1435890 | 0.829517 | 4.923913e-55 | -8.615850e-47 |
| Msa0410650 | Msa1435890 | 0.843917 | 1.043365e-58 | -8.615850e-47 |
| Msa0411160 | Msa1435890 | 0.848298 | 6.698897e-60 | -8.615850e-47 |
| Msa0411190 | Msa1435890 | 0.868111 | 8.322920e-66 | -8.615850e-47 |
| Msa0417270 | Msa1435890 | 0.820733 | 5.869394e-53 | -8.615850e-47 |
| Msa0417880 | Msa1435890 | 0.858283 | 9.159848e-63 | -8.615850e-47 |
| Msa0424790 | Msa1435890 | 0.830735 | 2.483674e-55 | -8.615850e-47 |
| Msa0440750 | Msa1435890 | 0.814861 | 1.241634e-51 | -8.615850e-47 |
| Msa0462390 | Msa1435890 | 0.810341 | 1.209641e-50 | -8.615850e-47 |
| Msa0462430 | Msa1435890 | 0.810134 | 1.340288e-50 | -8.615850e-47 |
| Msa0462480 | Msa1435890 | 0.802303 | 5.980910e-49 | -8.615850e-47 |
| Msa0464380 | Msa1435890 | 0.865749 | 4.710066e-65 | -8.615850e-47 |
| Msa0467430 | Msa1435890 | 0.803566 | 3.279716e-49 | -8.615850e-47 |
| Msa0468150 | Msa1435890 | 0.804374 | 2.227970e-49 | -8.615850e-47 |
| Msa0470690 | Msa1435890 | 0.844263 | 8.424097e-59 | -8.615850e-47 |
| Msa0479170 | Msa1435890 | 0.829828 | 4.136350e-55 | -8.615850e-47 |
| Msa0979730 | Msa1435890 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa1004840 | Msa1435890 | 0.816656 | 4.942374e-52 | -8.615850e-47 |
| Msa1017630 | Msa1435890 | 0.813884 | 2.041737e-51 | -8.615850e-47 |
| Msa1020670 | Msa1435890 | 0.821908 | 3.144095e-53 | -8.615850e-47 |
| Msa1035960 | Msa1435890 | 0.848019 | 8.000947e-60 | -8.615850e-47 |
| Msa1047870 | Msa1435890 | 0.808565 | 2.909187e-50 | -8.615850e-47 |
| Msa1081980 | Msa1435890 | 0.800013 | 1.758443e-48 | -8.615850e-47 |
| Msa1085200 | Msa1435890 | 0.843102 | 1.722441e-58 | -8.615850e-47 |
| Msa1096970 | Msa1435890 | 0.802517 | 5.402928e-49 | -8.615850e-47 |
| Msa0239480 | Msa1435890 | 0.805546 | 1.266958e-49 | -8.615850e-47 |
| Msa0239570 | Msa1435890 | 0.801049 | 1.081419e-48 | -8.615850e-47 |
| Msa0240110 | Msa1435890 | 0.858208 | 9.646746e-63 | -8.615850e-47 |
| Msa0240150 | Msa1435890 | 0.856489 | 3.108821e-62 | -8.615850e-47 |
| Msa0243100 | Msa1435890 | 0.811435 | 7.012585e-51 | -8.615850e-47 |
| Msa0244860 | Msa1435890 | 0.819021 | 1.445131e-52 | -8.615850e-47 |
| Msa0248970 | Msa1435890 | 0.816872 | 4.420873e-52 | -8.615850e-47 |
| Msa0255090 | Msa1435890 | 0.801293 | 9.641091e-49 | -8.615850e-47 |
| Msa0258330 | Msa1435890 | 0.800774 | 1.230838e-48 | -8.615850e-47 |
| Msa0272770 | Msa1435890 | 0.833837 | 4.238755e-56 | -8.615850e-47 |
| Msa0282790 | Msa1435890 | 0.812128 | 4.954169e-51 | -8.615850e-47 |
| Msa0283450 | Msa1435890 | 0.801829 | 7.487325e-49 | -8.615850e-47 |
| Msa0283520 | Msa1435890 | 0.810316 | 1.224931e-50 | -8.615850e-47 |
| Msa0287650 | Msa1435890 | 0.818193 | 2.226687e-52 | -8.615850e-47 |
| Msa0295070 | Msa1435890 | 0.803867 | 2.840210e-49 | -8.615850e-47 |
| Msa0297740 | Msa1435890 | 0.825302 | 5.048117e-54 | -8.615850e-47 |
| Msa0313020 | Msa1435890 | 0.822122 | 2.804792e-53 | -8.615850e-47 |
| Msa0317730 | Msa1435890 | 0.850212 | 1.965537e-60 | -8.615850e-47 |
| Msa0332000 | Msa1435890 | 0.807900 | 4.031548e-50 | -8.615850e-47 |
| Msa0334490 | Msa1435890 | 0.816118 | 6.520456e-52 | -8.615850e-47 |
| Msa0335780 | Msa1435890 | 0.802669 | 5.026962e-49 | -8.615850e-47 |
| Msa0340090 | Msa1435890 | 0.861033 | 1.363180e-63 | -8.615850e-47 |
| Msa0345970 | Msa1435890 | 0.803555 | 3.296716e-49 | -8.615850e-47 |
| Msa1121440 | Msa1435890 | 0.803408 | 3.536410e-49 | -8.615850e-47 |
| Msa1127890 | Msa1435890 | 0.802612 | 5.165136e-49 | -8.615850e-47 |
| Msa1140210 | Msa1435890 | 0.830905 | 2.256813e-55 | -8.615850e-47 |
| Msa1147280 | Msa1435890 | 0.804916 | 1.717174e-49 | -8.615850e-47 |
| Msa1170410 | Msa1435890 | 0.824589 | 7.436737e-54 | -8.615850e-47 |
| Msa1199570 | Msa1435890 | 0.814296 | 1.656432e-51 | -8.615850e-47 |
| Msa1200020 | Msa1435890 | 0.840923 | 6.488526e-58 | -8.615850e-47 |
| Msa1209460 | Msa1435890 | 0.817983 | 2.483913e-52 | -8.615850e-47 |
| Msa0503060 | Msa1435890 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa0507680 | Msa1435890 | 0.857573 | 1.488695e-62 | -8.615850e-47 |
| Msa0509610 | Msa1435890 | 0.832920 | 7.175270e-56 | -8.615850e-47 |
| Msa0516170 | Msa1435890 | 0.817385 | 3.389390e-52 | -8.615850e-47 |
| Msa0546680 | Msa1435890 | 0.843797 | 1.123623e-58 | -8.615850e-47 |
| Msa0566310 | Msa1435890 | 0.870236 | 1.700042e-66 | -8.615850e-47 |
| Msa0569200 | Msa1435890 | 0.810017 | 1.420891e-50 | -8.615850e-47 |
| Msa0602460 | Msa1435890 | 0.818904 | 1.536351e-52 | -8.615850e-47 |
| Msa0856920 | Msa1435890 | 0.809544 | 1.795869e-50 | -8.615850e-47 |
| Msa0861090 | Msa1435890 | 0.815930 | 7.180703e-52 | -8.615850e-47 |
| Msa0863930 | Msa1435890 | 0.809273 | 2.053041e-50 | -8.615850e-47 |
| Msa0864300 | Msa1435890 | 0.996067 | 5.125036e-223 | -8.615850e-47 |
| Msa0880950 | Msa1435890 | 0.834354 | 3.146870e-56 | -8.615850e-47 |
| Msa0888580 | Msa1435890 | 0.824866 | 6.398443e-54 | -8.615850e-47 |
| Msa0906690 | Msa1435890 | 0.805593 | 1.238754e-49 | -8.615850e-47 |
| Msa0933230 | Msa1435890 | 0.816076 | 6.661346e-52 | -8.615850e-47 |
| Msa0966400 | Msa1435890 | 0.823054 | 1.702620e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435890 | MtrunA17_Chr5g0446481 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Msa1435890 | MtrunA17_Chr3g0102341 | 56.552 | 290 | 92 | 8 | 383 | 653 | 370 | 644 | 2.28e-80 | 278 |
| Msa1435890 | MtrunA17_Chr3g0102341 | 54.826 | 259 | 105 | 6 | 701 | 949 | 528 | 784 | 1.40e-48 | 186 |
| Msa1435890 | MtrunA17_Chr3g0132011 | 39.688 | 320 | 147 | 10 | 384 | 676 | 91 | 391 | 1.22e-50 | 187 |
| Msa1435890 | MtrunA17_Chr3g0132011 | 34.884 | 258 | 139 | 10 | 695 | 941 | 249 | 488 | 8.93e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435890 | AT5G55660.1 | 52.261 | 199 | 78 | 4 | 365 | 558 | 301 | 487 | 5.62e-53 | 199 |
| Msa1435890 | AT5G55660.1 | 41.361 | 191 | 105 | 3 | 763 | 948 | 554 | 742 | 4.40e-24 | 109 |
| Msa1435890 | AT4G26630.2 | 53.807 | 197 | 72 | 4 | 380 | 569 | 307 | 491 | 1.30e-49 | 189 |
| Msa1435890 | AT4G26630.2 | 44.792 | 192 | 93 | 4 | 763 | 949 | 551 | 734 | 5.21e-24 | 109 |
| Msa1435890 | AT4G26630.1 | 53.807 | 197 | 72 | 4 | 380 | 569 | 307 | 491 | 1.30e-49 | 189 |
| Msa1435890 | AT4G26630.1 | 44.792 | 192 | 93 | 4 | 763 | 949 | 551 | 734 | 5.21e-24 | 109 |
| Msa1435890 | AT5G63550.2 | 39.667 | 300 | 137 | 6 | 385 | 653 | 94 | 380 | 1.04e-47 | 179 |
| Msa1435890 | AT5G63550.1 | 40.000 | 300 | 135 | 7 | 385 | 653 | 94 | 379 | 1.83e-46 | 175 |
| Msa1435890 | AT3G48710.1 | 32.326 | 430 | 212 | 15 | 384 | 754 | 53 | 462 | 3.25e-36 | 144 |
| Msa1435890 | AT1G64253.3 | 52.381 | 63 | 30 | 0 | 884 | 946 | 122 | 184 | 4.68e-13 | 69.3 |
| Msa1435890 | AT1G64253.2 | 52.381 | 63 | 30 | 0 | 884 | 946 | 254 | 316 | 2.23e-12 | 69.7 |
| Msa1435890 | AT1G64253.1 | 52.381 | 63 | 30 | 0 | 884 | 946 | 330 | 392 | 4.34e-11 | 66.6 |
Find 206 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAACATCCATGGAATTTA+TGG | 0.079462 | tig0027814:+19385 | Msa1435890:three_prime_UTR |
| TGCGAAGCTAATAGACTTTC+TGG | 0.127423 | tig0027814:+16240 | Msa1435890:CDS |
| CTCTTCAATTTGAAATTCTT+TGG | 0.180004 | tig0027814:-14872 | Msa1435890:intergenic |
| ATGCTCTCATCTTTGGCTTC+AGG | 0.206211 | tig0027814:-14607 | Msa1435890:intergenic |
| AACTTGGCATTGGATATATT+TGG | 0.223795 | tig0027814:+13184 | Msa1435890:five_prime_UTR |
| ACTTGAGAAAGTATTGAAAA+AGG | 0.225143 | tig0027814:+14708 | Msa1435890:CDS |
| TGCAACGGATTCTTTCTTTC+TGG | 0.237255 | tig0027814:-17799 | Msa1435890:intergenic |
| GTATTGATATTGTGTATTCT+AGG | 0.238553 | tig0027814:+13452 | Msa1435890:five_prime_UTR |
| GTATCTACCTGCTTTGTCTT+TGG | 0.259843 | tig0027814:-18015 | Msa1435890:intergenic |
| GTCTTTACAGATGCCTTTCT+TGG | 0.280038 | tig0027814:-19174 | Msa1435890:intergenic |
| TGTGACCTTCAATAAGCTTT+TGG | 0.284216 | tig0027814:-13485 | Msa1435890:intergenic |
| TGCCCTCATCTTTGCTTTCA+AGG | 0.287502 | tig0027814:-14411 | Msa1435890:intergenic |
| TAGCATGTTAATGTCAGTTT+TGG | 0.296740 | tig0027814:-13672 | Msa1435890:intergenic |
| AGGATAAGAAAGTTAATATT+GGG | 0.305761 | tig0027814:+14245 | Msa1435890:CDS |
| TGATAAAGGGGAAGAATTAA+AGG | 0.309808 | tig0027814:+14222 | Msa1435890:CDS |
| GAGGATAAGAAAGTTAATAT+TGG | 0.311525 | tig0027814:+14244 | Msa1435890:CDS |
| TCATCCATGGCATCTAATTC+AGG | 0.319577 | tig0027814:-14379 | Msa1435890:intergenic |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | tig0027814:+14172 | Msa1435890:CDS |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | tig0027814:+14208 | Msa1435890:CDS |
| GATAAGAAAGATGATGATAA+TGG | 0.331137 | tig0027814:+14283 | Msa1435890:CDS |
| GTGAGTCGACAATGGTTTCT+TGG | 0.348685 | tig0027814:-17883 | Msa1435890:intergenic |
| TCTTTACAGATGCCTTTCTT+GGG | 0.349273 | tig0027814:-19173 | Msa1435890:intergenic |
| TGCTCTCATCTTTGGCTTCA+GGG | 0.352203 | tig0027814:-14606 | Msa1435890:intergenic |
| ATATTGTGAAATGGTGACTA+TGG | 0.358528 | tig0027814:-13332 | Msa1435890:intergenic |
| TTAACATCCATGGAATTTAT+GGG | 0.367431 | tig0027814:+19386 | Msa1435890:three_prime_UTR |
| TGGCATTTAAATTATCTAGA+AGG | 0.368252 | tig0027814:+15172 | Msa1435890:CDS |
| CTTGTATTTGCATTCCCAAC+TGG | 0.374686 | tig0027814:-15735 | Msa1435890:intergenic |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | tig0027814:+14173 | Msa1435890:CDS |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | tig0027814:+14209 | Msa1435890:CDS |
| GCATGAAACTGCATAATTAC+TGG | 0.376456 | tig0027814:-19457 | Msa1435890:intergenic |
| TTTGTTCTTGATCTTTCTTT+CGG | 0.380948 | tig0027814:-18581 | Msa1435890:intergenic |
| TTCTTCCTTGAAAAGACCTT+GGG | 0.390073 | tig0027814:-17939 | Msa1435890:intergenic |
| ACAGAAAACAATAACAAAAC+CGG | 0.394251 | tig0027814:+13878 | Msa1435890:CDS |
| CGGTTGGTTGTAGGAGTTGT+TGG | 0.399867 | tig0027814:-14790 | Msa1435890:intergenic |
| CGTACAGGACGGTTGGTTGT+AGG | 0.414924 | tig0027814:-14799 | Msa1435890:intergenic |
| AGGATAAGAAAGTTGATGTT+AGG | 0.418299 | tig0027814:+14029 | Msa1435890:CDS |
| AGCGGGAAAGGAAAGGTTGA+TGG | 0.418499 | tig0027814:+14535 | Msa1435890:CDS |
| TAGTACAAAATATTGTGAAA+TGG | 0.419255 | tig0027814:-13341 | Msa1435890:intergenic |
| GTAATGCCTGACCGAGGATT+AGG | 0.419284 | tig0027814:+19265 | Msa1435890:exon |
| AGGATAAGAAAGACGATGTA+GGG | 0.420916 | tig0027814:+13993 | Msa1435890:CDS |
| TCCTACAAAAGAGGATTGTA+TGG | 0.423332 | tig0027814:-15221 | Msa1435890:intergenic |
| ATAGCAAAACAAGGCTCAAC+AGG | 0.431493 | tig0027814:+16458 | Msa1435890:CDS |
| TGACAAATCTGAAGATGAAA+AGG | 0.431708 | tig0027814:+16752 | Msa1435890:CDS |
| GATATTGTGTATTCTAGGAT+TGG | 0.432331 | tig0027814:+13457 | Msa1435890:five_prime_UTR |
| CTTCTTCCTTGAAAAGACCT+TGG | 0.434088 | tig0027814:-17940 | Msa1435890:intergenic |
| CAGAGAGGATGATAAGGATA+AGG | 0.435697 | tig0027814:+14459 | Msa1435890:CDS |
| ATTTCAGTTGAGATAGCAAT+TGG | 0.436096 | tig0027814:+13209 | Msa1435890:five_prime_UTR |
| TGAGTCGACAATGGTTTCTT+GGG | 0.438135 | tig0027814:-17882 | Msa1435890:intergenic |
| TGGGGAGGAAGAACTAGAAA+TGG | 0.438759 | tig0027814:+13826 | Msa1435890:CDS |
| TCTACCTGCTTTGTCTTTGG+AGG | 0.441817 | tig0027814:-18012 | Msa1435890:intergenic |
| AACAATAACAAAACCGGGGA+TGG | 0.443425 | tig0027814:+13884 | Msa1435890:CDS |
| ATAAGAAAGATGATGATAAT+GGG | 0.443554 | tig0027814:+14284 | Msa1435890:CDS |
| AAACAAGGCTCAACAGGATC+TGG | 0.448149 | tig0027814:+16464 | Msa1435890:CDS |
| TTTGTCTTTGGAGGAAGACT+TGG | 0.451286 | tig0027814:-18003 | Msa1435890:intergenic |
| CCTTTCCTCTCCTACAAAAG+AGG | 0.454663 | tig0027814:-15230 | Msa1435890:intergenic |
| GAGGGGAAGAAAGCTGATGA+AGG | 0.456835 | tig0027814:+14100 | Msa1435890:CDS |
| AAGAGAACGAAGAGAACGAC+AGG | 0.458455 | tig0027814:+19242 | Msa1435890:CDS |
| GAGGATTAGGTGTGACTGCT+TGG | 0.464707 | tig0027814:+19278 | Msa1435890:three_prime_UTR |
| AAAACCACGCTCGGCACGAA+AGG | 0.466168 | tig0027814:+17854 | Msa1435890:CDS |
| ATCACTTGCAGAACAAGAAA+AGG | 0.466254 | tig0027814:+16288 | Msa1435890:CDS |
| AAACAAGGTTCATCAAGATC+TGG | 0.467180 | tig0027814:+16930 | Msa1435890:CDS |
| AAACAAAGTTCATCGAGATC+TGG | 0.467180 | tig0027814:+17406 | Msa1435890:CDS |
| GAGGATGAGAAAGTTGTTGA+AGG | 0.467739 | tig0027814:+13920 | Msa1435890:CDS |
| AGATGAGGAGGTGGGCGATA+AGG | 0.469853 | tig0027814:+14648 | Msa1435890:CDS |
| ATGAGAAGAAAGTGAGTGAA+AGG | 0.469883 | tig0027814:+17763 | Msa1435890:CDS |
| TCTTTCACTTTGCAGGGTCG+TGG | 0.471388 | tig0027814:+14964 | Msa1435890:intron |
| GGAGGTGGGCGATAAGGATA+AGG | 0.471989 | tig0027814:+14654 | Msa1435890:CDS |
| AGAAGACAGAGAGGATGATA+AGG | 0.474281 | tig0027814:+14453 | Msa1435890:CDS |
| TCCCCACTTTCAGATTTCTC+CGG | 0.474376 | tig0027814:-17723 | Msa1435890:intergenic |
| GCGGGAAAGGAAAGGTTGAT+GGG | 0.476391 | tig0027814:+14536 | Msa1435890:CDS |
| ATTGATTTAGTGATAAGTGA+TGG | 0.480612 | tig0027814:+13126 | Msa1435890:five_prime_UTR |
| ACTCACTCTGCATCCGATCA+TGG | 0.484372 | tig0027814:+17900 | Msa1435890:CDS |
| TTGATTTAGTGATAAGTGAT+GGG | 0.486399 | tig0027814:+13127 | Msa1435890:five_prime_UTR |
| ACTGATTTCCTTTCACGTAC+AGG | 0.487334 | tig0027814:-14814 | Msa1435890:intergenic |
| ATGTAACAAAGAGAAGTTGC+TGG | 0.487637 | tig0027814:+15689 | Msa1435890:CDS |
| ATCTGCTTGACGTACCAGTT+GGG | 0.489298 | tig0027814:+15721 | Msa1435890:CDS |
| AAAACTGACATTAACATGCT+AGG | 0.489488 | tig0027814:+13674 | Msa1435890:CDS |
| CAAAGATGAGAGCATTGAAA+AGG | 0.490075 | tig0027814:+14615 | Msa1435890:CDS |
| GAGGACAAGCATGCTGATGA+AGG | 0.491058 | tig0027814:+13956 | Msa1435890:CDS |
| AAACCACGCTCGGCACGAAA+GGG | 0.493787 | tig0027814:+17855 | Msa1435890:CDS |
| CTTGTAAATCTTAACATCCA+TGG | 0.494733 | tig0027814:+19376 | Msa1435890:three_prime_UTR |
| GAGGATAAGAAAGTCAATGA+AGG | 0.495054 | tig0027814:+14064 | Msa1435890:CDS |
| GAAATTGATAAGAAAGCTGA+TGG | 0.495376 | tig0027814:+13806 | Msa1435890:CDS |
| CAAAGATGAGGGCAGTGAAA+AGG | 0.496877 | tig0027814:+14420 | Msa1435890:CDS |
| GAAAAGTCGAGATGAGGAGG+TGG | 0.497804 | tig0027814:+14639 | Msa1435890:CDS |
| GAGGATAAGAAAGACGATGT+AGG | 0.498637 | tig0027814:+13992 | Msa1435890:CDS |
| CTTGTTCCCCATAAATTCCA+TGG | 0.498950 | tig0027814:-19393 | Msa1435890:intergenic |
| CATCACTGTTTCAAACAGGT+TGG | 0.499557 | tig0027814:-13250 | Msa1435890:intergenic |
| TAATACCAAAAGCTTATTGA+AGG | 0.503564 | tig0027814:+13480 | Msa1435890:five_prime_UTR |
| ATGTTATCTAAGCACTTCAC+TGG | 0.504941 | tig0027814:-13614 | Msa1435890:intergenic |
| GTCACACCTAATCCTCGGTC+AGG | 0.506796 | tig0027814:-19271 | Msa1435890:intergenic |
| CGTGGATCTCACCCCAAGAA+AGG | 0.508523 | tig0027814:+19161 | Msa1435890:CDS |
| AAACTGACATTAACATGCTA+GGG | 0.509499 | tig0027814:+13675 | Msa1435890:CDS |
| CAATAACAAAACCGGGGATG+GGG | 0.511346 | tig0027814:+13886 | Msa1435890:CDS |
| ACAATAACAAAACCGGGGAT+GGG | 0.512246 | tig0027814:+13885 | Msa1435890:CDS |
| AGGGGAAGAAAGCTGATGAA+GGG | 0.512575 | tig0027814:+14101 | Msa1435890:CDS |
| GAGGATAAGAAAGACGATGC+AGG | 0.513407 | tig0027814:+14136 | Msa1435890:CDS |
| TCCGTAGCAGAGGAGAGAAA+AGG | 0.513706 | tig0027814:+17600 | Msa1435890:CDS |
| GAAGCCTGAATTAGATGCCA+TGG | 0.514285 | tig0027814:+14375 | Msa1435890:CDS |
| AAAGAAGGACCCGGAACCTA+AGG | 0.514727 | tig0027814:+13721 | Msa1435890:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | tig0027814:+14174 | Msa1435890:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | tig0027814:+14210 | Msa1435890:CDS |
| GGAGAAAAGTCGAGATGAGG+AGG | 0.517122 | tig0027814:+14636 | Msa1435890:CDS |
| AAAGGGTGGGAGAGGAAATG+TGG | 0.517698 | tig0027814:+14726 | Msa1435890:CDS |
| GACTATTATTCAGCAAGAGC+TGG | 0.518089 | tig0027814:+19194 | Msa1435890:CDS |
| TATTGGGGATGAAATTAAAG+AGG | 0.520170 | tig0027814:+14261 | Msa1435890:CDS |
| GAAGGAACTGAAGAAGATAG+AGG | 0.526671 | tig0027814:+14579 | Msa1435890:CDS |
| CTTTACAGATGCCTTTCTTG+GGG | 0.527928 | tig0027814:-19172 | Msa1435890:intergenic |
| GGGGAAGAAAGCTGATGAAG+GGG | 0.527985 | tig0027814:+14102 | Msa1435890:CDS |
| TAAAGGGGAAGAATTAAAAG+AGG | 0.528111 | tig0027814:+14189 | Msa1435890:CDS |
| TTGCGTAACTGATCATCACT+CGG | 0.528843 | tig0027814:-18616 | Msa1435890:intergenic |
| TGAGTCTGAGGAAGAACAGA+AGG | 0.530398 | tig0027814:+17641 | Msa1435890:CDS |
| TGGGAGAGGAAATGTGGAGA+AGG | 0.533504 | tig0027814:+14732 | Msa1435890:CDS |
| CAAAGAATTTCAAATTGAAG+AGG | 0.534513 | tig0027814:+14873 | Msa1435890:CDS |
| TTTAGCTTTACTTTGTGCAA+CGG | 0.534541 | tig0027814:-17814 | Msa1435890:intergenic |
| CAGAAAACAATAACAAAACC+GGG | 0.534823 | tig0027814:+13879 | Msa1435890:CDS |
| AGGATAAGAAAGTCAATGAA+GGG | 0.536311 | tig0027814:+14065 | Msa1435890:CDS |
| TGTTAGGCAAGAGGTAAAAG+AGG | 0.536428 | tig0027814:+14045 | Msa1435890:CDS |
| CAAATCCAAGGATGAAAAGC+CGG | 0.539070 | tig0027814:+17704 | Msa1435890:CDS |
| AGAAGACTCGAGTGAAAAGA+AGG | 0.540152 | tig0027814:+13706 | Msa1435890:CDS |
| AACAAAACCGGGGATGGGGA+AGG | 0.541916 | tig0027814:+13890 | Msa1435890:CDS |
| AAGGATACTCTCTTCATCCA+TGG | 0.543834 | tig0027814:-14392 | Msa1435890:intergenic |
| TGAAGGAGAAGAACTAAAAG+AGG | 0.545142 | tig0027814:+13973 | Msa1435890:CDS |
| ATTTAAATTATCTAGAAGGA+AGG | 0.545571 | tig0027814:+15176 | Msa1435890:CDS |
| GTCAAAGATTTGAAAGAGGA+TGG | 0.546722 | tig0027814:+13770 | Msa1435890:CDS |
| CCTTTCACGTACAGGACGGT+TGG | 0.549359 | tig0027814:-14806 | Msa1435890:intergenic |
| TGTAGGGGAAGAAAGAAAAG+AGG | 0.551335 | tig0027814:+14009 | Msa1435890:CDS |
| GAAAGTTGATGTTAGGCAAG+AGG | 0.551951 | tig0027814:+14036 | Msa1435890:CDS |
| TGCTGTCAAAGATTTGAAAG+AGG | 0.553144 | tig0027814:+13766 | Msa1435890:CDS |
| GATCTGCTTGACGTACCAGT+TGG | 0.553892 | tig0027814:+15720 | Msa1435890:CDS |
| TATTGTGAAATGGTGACTAT+GGG | 0.553990 | tig0027814:-13331 | Msa1435890:intergenic |
| GGATAAGAAAGACGATGTAG+GGG | 0.555055 | tig0027814:+13994 | Msa1435890:CDS |
| AGAGGATGGTATAAAAGCAA+TGG | 0.556456 | tig0027814:+13784 | Msa1435890:CDS |
| AAAGAAAATGAAGGAACTGA+AGG | 0.559025 | tig0027814:+14759 | Msa1435890:CDS |
| AGGATGAGAAAGTTGTTGAA+GGG | 0.560754 | tig0027814:+13921 | Msa1435890:CDS |
| GTTCCCTTTCGTGCCGAGCG+TGG | 0.562593 | tig0027814:-17858 | Msa1435890:intergenic |
| ATCATCAAGACGTTCTGCTA+AGG | 0.566618 | tig0027814:+16959 | Msa1435890:CDS |
| TCCATCACTATCACCATGAT+CGG | 0.568310 | tig0027814:-17913 | Msa1435890:intergenic |
| ATGGATAAGCAAGCTGATGA+TGG | 0.569226 | tig0027814:+13845 | Msa1435890:CDS |
| CACGTCAAGACGTTCTGCTA+AGG | 0.570043 | tig0027814:+17435 | Msa1435890:CDS |
| AGCCGGAGAAATCTGAAAGT+GGG | 0.571709 | tig0027814:+17721 | Msa1435890:CDS |
| AGGATAAGAAAGACGATGCA+GGG | 0.573511 | tig0027814:+14137 | Msa1435890:CDS |
| GGATAAGAAAGTCAATGAAG+GGG | 0.576776 | tig0027814:+14066 | Msa1435890:CDS |
| GATAAGAAAGTCAATGAAGG+GGG | 0.580294 | tig0027814:+14067 | Msa1435890:CDS |
| CAGTTGGGAATGCAAATACA+AGG | 0.581246 | tig0027814:+15736 | Msa1435890:CDS |
| AAGCCGGAGAAATCTGAAAG+TGG | 0.581270 | tig0027814:+17720 | Msa1435890:CDS |
| AACGTCAAGACGATCTGCTA+AGG | 0.582795 | tig0027814:+16493 | Msa1435890:CDS |
| TGGGAATGCAAATACAAGGA+AGG | 0.584888 | tig0027814:+15740 | Msa1435890:CDS |
| AAAGGAGAAAAGTCGAGATG+AGG | 0.585952 | tig0027814:+14633 | Msa1435890:CDS |
| GGAAGACTTGGTGAGAGTTG+AGG | 0.586612 | tig0027814:-17991 | Msa1435890:intergenic |
| CCAACCGTCCTGTACGTGAA+AGG | 0.587863 | tig0027814:+14806 | Msa1435890:CDS |
| AGTTAAAGCAAAACCACGCT+CGG | 0.590668 | tig0027814:+17845 | Msa1435890:CDS |
| GAAAGATGAAGAAAACAAAG+AGG | 0.591937 | tig0027814:+16710 | Msa1435890:CDS |
| CACTGTTCCTGACAAATCCA+AGG | 0.592153 | tig0027814:+17692 | Msa1435890:CDS |
| TGAAGGGAAAGAAATAAAAG+AGG | 0.595089 | tig0027814:+13937 | Msa1435890:CDS |
| CTCGAGTGAAAAGAAGGACC+CGG | 0.597637 | tig0027814:+13712 | Msa1435890:CDS |
| AAGGAAATCAGTTCAGCGGT+TGG | 0.598635 | tig0027814:+14825 | Msa1435890:CDS |
| ACCGAGTAGCTTCAAAATGT+CGG | 0.599252 | tig0027814:-18880 | Msa1435890:intergenic |
| GAAAATGAAGGAACTGAAGG+AGG | 0.601330 | tig0027814:+14762 | Msa1435890:CDS |
| GTGAAGTGCTTAGATAACAT+TGG | 0.603102 | tig0027814:+13617 | Msa1435890:five_prime_UTR |
| TGAAGATTCTTCCGTAGCAG+AGG | 0.604934 | tig0027814:+17590 | Msa1435890:CDS |
| TGATAAGAAAGCTGATGGGG+AGG | 0.606760 | tig0027814:+13811 | Msa1435890:CDS |
| TCTTCCTCCAAAGACAAAGC+AGG | 0.608589 | tig0027814:+18008 | Msa1435890:CDS |
| TGCAGGGGTAGAATTAAAAG+AGG | 0.613557 | tig0027814:+14153 | Msa1435890:CDS |
| AAGCAGTCACACCTAATCCT+CGG | 0.613596 | tig0027814:-19276 | Msa1435890:intergenic |
| GGATAAGAAAGTTAATATTG+GGG | 0.615197 | tig0027814:+14246 | Msa1435890:CDS |
| TATCCTTGAAAGCAAAGATG+AGG | 0.617284 | tig0027814:+14408 | Msa1435890:CDS |
| AAAAGTCGAGATGAGGAGGT+GGG | 0.619228 | tig0027814:+14640 | Msa1435890:CDS |
| TAACATCCATGGAATTTATG+GGG | 0.619414 | tig0027814:+19387 | Msa1435890:three_prime_UTR |
| AAGAAGGACCCGGAACCTAA+GGG | 0.623031 | tig0027814:+13722 | Msa1435890:CDS |
| GGATAAGAAAGACGATGCAG+GGG | 0.625327 | tig0027814:+14138 | Msa1435890:CDS |
| TGCGTAACTGATCATCACTC+GGG | 0.628020 | tig0027814:-18615 | Msa1435890:intergenic |
| GCCGGAGAAATCTGAAAGTG+GGG | 0.631822 | tig0027814:+17722 | Msa1435890:CDS |
| AAATTGATAAGAAAGCTGAT+GGG | 0.632945 | tig0027814:+13807 | Msa1435890:CDS |
| TCCGATCATGGTGATAGTGA+TGG | 0.633583 | tig0027814:+17912 | Msa1435890:CDS |
| CGGGAAAGGAAAGGTTGATG+GGG | 0.636918 | tig0027814:+14537 | Msa1435890:CDS |
| TGATTTAGTGATAAGTGATG+GGG | 0.639144 | tig0027814:+13128 | Msa1435890:five_prime_UTR |
| GACTGCTTGGATATATACAT+AGG | 0.639381 | tig0027814:+19291 | Msa1435890:three_prime_UTR |
| TGACACGGAAGATGAGTCTG+AGG | 0.639914 | tig0027814:+17629 | Msa1435890:CDS |
| ATTTCCTTTCACGTACAGGA+CGG | 0.640045 | tig0027814:-14810 | Msa1435890:intergenic |
| CTTAGCAGAACGTCTTGACG+TGG | 0.642847 | tig0027814:-17434 | Msa1435890:intergenic |
| AGATAACATTGGCATGAGTG+AGG | 0.643975 | tig0027814:+13628 | Msa1435890:exon |
| ATCCTTGAAAGCAAAGATGA+GGG | 0.644303 | tig0027814:+14409 | Msa1435890:CDS |
| TACAAAAGAGGATTGTATGG+AGG | 0.648735 | tig0027814:-15218 | Msa1435890:intergenic |
| GGATGGGGAAGGAATAAAAG+AGG | 0.653046 | tig0027814:+13901 | Msa1435890:CDS |
| TGATAGTGATGGAAGTCCCA+AGG | 0.653632 | tig0027814:+17923 | Msa1435890:CDS |
| TAAAGGGGAAGAATTAAAGG+AGG | 0.653663 | tig0027814:+14225 | Msa1435890:CDS |
| TTTATGGGGAACAAGCCAGT+AGG | 0.654503 | tig0027814:+19401 | Msa1435890:three_prime_UTR |
| CCTTTAGAAAATATACCCAA+TGG | 0.655466 | tig0027814:+14991 | Msa1435890:CDS |
| TTAGCAGATCGTCTTGACGT+TGG | 0.655765 | tig0027814:-16491 | Msa1435890:intergenic |
| AATTGATAAGAAAGCTGATG+GGG | 0.657202 | tig0027814:+13808 | Msa1435890:CDS |
| GATGCAGAGTGAGTCGACAA+TGG | 0.657519 | tig0027814:-17891 | Msa1435890:intergenic |
| AAACAGCGCATAGCAAAACA+AGG | 0.662113 | tig0027814:+16449 | Msa1435890:CDS |
| TGAAACAGTGATGAAAATTG+CGG | 0.662904 | tig0027814:+13260 | Msa1435890:five_prime_UTR |
| GATACACTTGTTGTGACTTG+AGG | 0.670370 | tig0027814:-16268 | Msa1435890:intergenic |
| GAGAAAAGGATTTACTGACA+CGG | 0.671908 | tig0027814:+17614 | Msa1435890:CDS |
| AAGGACCCGGAACCTAAGGG+AGG | 0.685854 | tig0027814:+13725 | Msa1435890:CDS |
| TTCAGGTAAGCAATTCGACG+TGG | 0.687225 | tig0027814:+19143 | Msa1435890:intron |
| GTGAAAGGAAATCAGTTCAG+CGG | 0.696158 | tig0027814:+14821 | Msa1435890:CDS |
| TTTCACTCGAGTCTTCTAGG+TGG | 0.696693 | tig0027814:-13700 | Msa1435890:intergenic |
| ATTGTGAAATGGTGACTATG+GGG | 0.697187 | tig0027814:-13330 | Msa1435890:intergenic |
| TGAGAATGACAAATTCAGTG+AGG | 0.705125 | tig0027814:+14309 | Msa1435890:CDS |
| AGAGAACGAAGAGAACGACA+GGG | 0.709851 | tig0027814:+19243 | Msa1435890:CDS |
| TTGTGAAATGGTGACTATGG+GGG | 0.710251 | tig0027814:-13329 | Msa1435890:intergenic |
| AGAAAACAATAACAAAACCG+GGG | 0.717065 | tig0027814:+13880 | Msa1435890:CDS |
| GACAGGGTAATGCCTGACCG+AGG | 0.722362 | tig0027814:+19259 | Msa1435890:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATAATATTATAAAA+AGG | + | tig0027814:18289-18308 | Msa1435890:intron | 0.0% |
| !! | TGATTAAGAAAAATATATTA+AGG | + | tig0027814:15482-15501 | Msa1435890:CDS | 10.0% |
| !! | ACATTTAATCATAAAATTAA+GGG | - | tig0027814:18104-18123 | Msa1435890:intergenic | 10.0% |
| !! | AACATTTAATCATAAAATTA+AGG | - | tig0027814:18105-18124 | Msa1435890:intergenic | 10.0% |
| !!! | ATTTTATGATTAAATGTTTT+TGG | + | tig0027814:18107-18126 | Msa1435890:intron | 10.0% |
| !!! | TTTTTTTTACAAGAAAAAAA+AGG | - | tig0027814:18177-18196 | Msa1435890:intergenic | 10.0% |
| !!! | AAATAACATATTTTTAACAA+AGG | + | tig0027814:18321-18340 | Msa1435890:intron | 10.0% |
| !!! | AATAACATATTTTTAACAAA+GGG | + | tig0027814:18322-18341 | Msa1435890:intron | 10.0% |
| !! | TTAAAATTAAAATCAACATT+AGG | - | tig0027814:18780-18799 | Msa1435890:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACACTGAT+AGG | + | tig0027814:13567-13586 | Msa1435890:intron | 15.0% |
| !!! | ATATTTTAACAGATAACAAA+TGG | - | tig0027814:15307-15326 | Msa1435890:intergenic | 15.0% |
| !!! | AAAAATATATTAAGGTTTTC+TGG | + | tig0027814:15490-15509 | Msa1435890:CDS | 15.0% |
| !! | ATTTATACTACTATTATACT+CGG | + | tig0027814:16028-16047 | Msa1435890:intron | 15.0% |
| !! | TGATTTATAACCAATAAATT+TGG | + | tig0027814:16584-16603 | Msa1435890:intron | 15.0% |
| !!! | TGCTTTAAAACTAATAAATT+TGG | + | tig0027814:17066-17085 | Msa1435890:intron | 15.0% |
| !!! | AATATTAAACCTCTAAAAAA+AGG | - | tig0027814:18209-18228 | Msa1435890:intergenic | 15.0% |
| !! | TGAAATCTGTAATATAAAAA+GGG | - | tig0027814:18388-18407 | Msa1435890:intergenic | 15.0% |
| !! | ATGAAATCTGTAATATAAAA+AGG | - | tig0027814:18389-18408 | Msa1435890:intergenic | 15.0% |
| !! | AAAAAGGTAATAATAAAGAA+GGG | - | tig0027814:18911-18930 | Msa1435890:intergenic | 15.0% |
| !! | TAGTACAAAATATTGTGAAA+TGG | - | tig0027814:13344-13363 | Msa1435890:intergenic | 20.0% |
| !!! | TCACAATATTTTGTACTAAA+TGG | + | tig0027814:13346-13365 | Msa1435890:five_prime_UTR | 20.0% |
| !!! | TTGAAACAATCTTTCATTTT+AGG | + | tig0027814:13415-13434 | Msa1435890:five_prime_UTR | 20.0% |
| !! | AGGATAAGAAAGTTAATATT+GGG | + | tig0027814:14245-14264 | Msa1435890:CDS | 20.0% |
| !! | ATAAGAAAGATGATGATAAT+GGG | + | tig0027814:14284-14303 | Msa1435890:CDS | 20.0% |
| !! | TTCAATATAACACACAATTA+AGG | - | tig0027814:14923-14942 | Msa1435890:intergenic | 20.0% |
| !! | AGAGAATATATAGATCATAA+TGG | - | tig0027814:15048-15067 | Msa1435890:intergenic | 20.0% |
| !! | ATTTAAATTATCTAGAAGGA+AGG | + | tig0027814:15176-15195 | Msa1435890:CDS | 20.0% |
| !! | TGACTGAAATGAAAAAAATT+AGG | - | tig0027814:15277-15296 | Msa1435890:intergenic | 20.0% |
| !! | AATTTCATTATTCAAGGTAA+GGG | - | tig0027814:15393-15412 | Msa1435890:intergenic | 20.0% |
| !! | TAATTTCATTATTCAAGGTA+AGG | - | tig0027814:15394-15413 | Msa1435890:intergenic | 20.0% |
| !! | ACCTTGAATAATGAAATTAA+CGG | + | tig0027814:15395-15414 | Msa1435890:intron | 20.0% |
| !!! | TTGAATTTTTGTAACATTAC+AGG | + | tig0027814:15896-15915 | Msa1435890:intron | 20.0% |
| !! | TATCTAATTAATGTGTATTC+CGG | - | tig0027814:15922-15941 | Msa1435890:intergenic | 20.0% |
| !!! | AATCAATATGTTAAAAGCAT+CGG | - | tig0027814:15985-16004 | Msa1435890:intergenic | 20.0% |
| !! | ATTTAGATATATACCATAAG+TGG | + | tig0027814:16556-16575 | Msa1435890:intron | 20.0% |
| !!! | AATTGTTTTTTTAGAGAAAG+TGG | + | tig0027814:17038-17057 | Msa1435890:intron | 20.0% |
| !! | AAATGTAACTAGATATATGA+TGG | + | tig0027814:17490-17509 | Msa1435890:intron | 20.0% |
| !! | AAGAAGAAAAATGAAAAACA+AGG | + | tig0027814:17957-17976 | Msa1435890:CDS | 20.0% |
| !! | AAAAAGGGAATAATCTATTT+GGG | - | tig0027814:18373-18392 | Msa1435890:intergenic | 20.0% |
| !! | TAAAAAGGGAATAATCTATT+TGG | - | tig0027814:18374-18393 | Msa1435890:intergenic | 20.0% |
| !! | AGATTTATAAACTACATAAG+AGG | - | tig0027814:18530-18549 | Msa1435890:intergenic | 20.0% |
| !! | CAAAAAGGTAATAATAAAGA+AGG | - | tig0027814:18912-18931 | Msa1435890:intergenic | 20.0% |
| !! | TCATTATTAAACTTAAACCA+AGG | - | tig0027814:18936-18955 | Msa1435890:intergenic | 20.0% |
| !!! | GTTTCTTTATTTATCAAAGA+CGG | + | tig0027814:19019-19038 | Msa1435890:intron | 20.0% |
| ! | GAAAAAATGTTAGAACAACA+TGG | - | tig0027814:13106-13125 | Msa0138010:intergenic | 25.0% |
| !! | ATTGATTTAGTGATAAGTGA+TGG | + | tig0027814:13126-13145 | Msa1435890:five_prime_UTR | 25.0% |
| ! | TTGATTTAGTGATAAGTGAT+GGG | + | tig0027814:13127-13146 | Msa1435890:five_prime_UTR | 25.0% |
| !! | GTATTGATATTGTGTATTCT+AGG | + | tig0027814:13452-13471 | Msa1435890:five_prime_UTR | 25.0% |
| ! | TAATACCAAAAGCTTATTGA+AGG | + | tig0027814:13480-13499 | Msa1435890:five_prime_UTR | 25.0% |
| ! | AAATTGATAAGAAAGCTGAT+GGG | + | tig0027814:13807-13826 | Msa1435890:CDS | 25.0% |
| ! | ACAGAAAACAATAACAAAAC+CGG | + | tig0027814:13878-13897 | Msa1435890:CDS | 25.0% |
| ! | GAGGATAAGAAAGTTAATAT+TGG | + | tig0027814:14244-14263 | Msa1435890:CDS | 25.0% |
| ! | GGATAAGAAAGTTAATATTG+GGG | + | tig0027814:14246-14265 | Msa1435890:CDS | 25.0% |
| ! | GATAAGAAAGATGATGATAA+TGG | + | tig0027814:14283-14302 | Msa1435890:CDS | 25.0% |
| ! | GAATGTGAAAAAGAAAATGA+AGG | + | tig0027814:14561-14580 | Msa1435890:CDS | 25.0% |
| !!! | ACTTGAGAAAGTATTGAAAA+AGG | + | tig0027814:14708-14727 | Msa1435890:CDS | 25.0% |
| !!! | CTTGAGAAAGTATTGAAAAA+GGG | + | tig0027814:14709-14728 | Msa1435890:CDS | 25.0% |
| !! | CTCTTCAATTTGAAATTCTT+TGG | - | tig0027814:14875-14894 | Msa1435890:intergenic | 25.0% |
| ! | CAAAGAATTTCAAATTGAAG+AGG | + | tig0027814:14873-14892 | Msa1435890:CDS | 25.0% |
| ! | GAAAGAAGAATTCAAACAAA+TGG | - | tig0027814:15026-15045 | Msa1435890:intergenic | 25.0% |
| ! | TGGCATTTAAATTATCTAGA+AGG | + | tig0027814:15172-15191 | Msa1435890:CDS | 25.0% |
| ! | TCCGTTAATTTCATTATTCA+AGG | - | tig0027814:15399-15418 | Msa1435890:intergenic | 25.0% |
| !!! | TCATTTTGTTATATATGACC+TGG | - | tig0027814:15557-15576 | Msa1435890:intergenic | 25.0% |
| ! | AGATGTTAAGTCAACAAAAA+AGG | - | tig0027814:16158-16177 | Msa1435890:intergenic | 25.0% |
| ! | TATTAATCTTCTACATATGC+AGG | + | tig0027814:16207-16226 | Msa1435890:intron | 25.0% |
| ! | AGGAAAAAGTTGAAAAGAAA+GGG | - | tig0027814:16326-16345 | Msa1435890:intergenic | 25.0% |
| ! | ATAAATCACTTTACCACTTA+TGG | - | tig0027814:16572-16591 | Msa1435890:intergenic | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+TGG | - | tig0027814:16597-16616 | Msa1435890:intergenic | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+TGG | + | tig0027814:16601-16620 | Msa1435890:intron | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | tig0027814:16811-16830 | Msa1435890:intergenic | 25.0% |
| ! | CAGAATAAAATAACACACTA+GGG | - | tig0027814:16812-16831 | Msa1435890:intergenic | 25.0% |
| ! | AAAAAACAATTTATCGCTTC+TGG | - | tig0027814:17029-17048 | Msa1435890:intergenic | 25.0% |
| ! | TGAAAAATCTGAAGATGAAA+AGG | + | tig0027814:17228-17247 | Msa1435890:CDS | 25.0% |
| ! | GGAAAAGTTTGAAAAGAAAA+GGG | - | tig0027814:17266-17285 | Msa1435890:intergenic | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | tig0027814:16811-16830 | Msa1435890:intergenic | 25.0% |
| ! | GAGAATAAAATAACACACTA+GGG | - | tig0027814:17288-17307 | Msa1435890:intergenic | 25.0% |
| ! | AGAGAATAAAATAACACACT+AGG | - | tig0027814:17289-17308 | Msa1435890:intergenic | 25.0% |
| !! | TACTTTTATCAGTCGATTAA+AGG | + | tig0027814:17361-17380 | Msa1435890:intron | 25.0% |
| !!! | TGCTTTAAAACCGATAAATT+TGG | + | tig0027814:17524-17543 | Msa1435890:intron | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+CGG | - | tig0027814:16597-16616 | Msa1435890:intergenic | 25.0% |
| !!! | AATTTGGCTTTCTAATCTTT+AGG | + | tig0027814:16600-16619 | Msa1435890:intron | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+GGG | + | tig0027814:16601-16620 | Msa1435890:intron | 25.0% |
| ! | ACTAGAAATATTTAGAAAGG+CGG | - | tig0027814:18080-18099 | Msa1435890:intergenic | 25.0% |
| ! | GGTACTAGAAATATTTAGAA+AGG | - | tig0027814:18083-18102 | Msa1435890:intergenic | 25.0% |
| ! | TGGCAAAGAAGATTAAAATA+AGG | + | tig0027814:18127-18146 | Msa1435890:intron | 25.0% |
| !!! | ATCATTGTTCCTTTTTTTAG+AGG | + | tig0027814:18197-18216 | Msa1435890:intron | 25.0% |
| ! | TAATATTGTTCCATTGTAAG+AGG | + | tig0027814:18222-18241 | Msa1435890:intron | 25.0% |
| ! | TTTGTTCTTGATCTTTCTTT+CGG | - | tig0027814:18584-18603 | Msa1435890:intergenic | 25.0% |
| ! | TAAAATCAACATTAGGATGT+AGG | - | tig0027814:18773-18792 | Msa1435890:intergenic | 25.0% |
| !! | TATTATTACCTTTTTGTCCT+TGG | + | tig0027814:18916-18935 | Msa1435890:intron | 25.0% |
| !! | ACAAATGAGTGTAACTTTTA+TGG | + | tig0027814:18984-19003 | Msa1435890:intron | 25.0% |
| !!! | TTTTGACTAGTTATGCATTT+TGG | + | tig0027814:19323-19342 | Msa1435890:three_prime_UTR | 25.0% |
| !!! | TTTGACTAGTTATGCATTTT+GGG | + | tig0027814:19324-19343 | Msa1435890:three_prime_UTR | 25.0% |
| ! | TTAACATCCATGGAATTTAT+GGG | + | tig0027814:19386-19405 | Msa1435890:three_prime_UTR | 25.0% |
| !! | AATATGTAAAGAAGCTTTTG+TGG | + | tig0027814:19494-19513 | Msa1435890:three_prime_UTR | 25.0% |
| TGATTTAGTGATAAGTGATG+GGG | + | tig0027814:13128-13147 | Msa1435890:five_prime_UTR | 30.0% | |
| !! | ATTGCAACTTGTTTTCAACT+TGG | + | tig0027814:13168-13187 | Msa1435890:five_prime_UTR | 30.0% |
| ! | AACTTGGCATTGGATATATT+TGG | + | tig0027814:13184-13203 | Msa1435890:five_prime_UTR | 30.0% |
| ATTTCAGTTGAGATAGCAAT+TGG | + | tig0027814:13209-13228 | Msa1435890:five_prime_UTR | 30.0% | |
| ! | TTTTCATCACTGTTTCAAAC+AGG | - | tig0027814:13257-13276 | Msa1435890:intergenic | 30.0% |
| TGAAACAGTGATGAAAATTG+CGG | + | tig0027814:13260-13279 | Msa1435890:five_prime_UTR | 30.0% | |
| TATTGTGAAATGGTGACTAT+GGG | - | tig0027814:13334-13353 | Msa1435890:intergenic | 30.0% | |
| ATATTGTGAAATGGTGACTA+TGG | - | tig0027814:13335-13354 | Msa1435890:intergenic | 30.0% | |
| !! | GATATTGTGTATTCTAGGAT+TGG | + | tig0027814:13457-13476 | Msa1435890:five_prime_UTR | 30.0% |
| CAACATGCAAAAAAAGAAAG+AGG | - | tig0027814:13520-13539 | Msa1435890:intergenic | 30.0% | |
| ! | TAGCATGTTAATGTCAGTTT+TGG | - | tig0027814:13675-13694 | Msa1435890:intergenic | 30.0% |
| AAAACTGACATTAACATGCT+AGG | + | tig0027814:13674-13693 | Msa1435890:CDS | 30.0% | |
| AAACTGACATTAACATGCTA+GGG | + | tig0027814:13675-13694 | Msa1435890:CDS | 30.0% | |
| GAAATTGATAAGAAAGCTGA+TGG | + | tig0027814:13806-13825 | Msa1435890:CDS | 30.0% | |
| AATTGATAAGAAAGCTGATG+GGG | + | tig0027814:13808-13827 | Msa1435890:CDS | 30.0% | |
| CAGAAAACAATAACAAAACC+GGG | + | tig0027814:13879-13898 | Msa1435890:CDS | 30.0% | |
| AGAAAACAATAACAAAACCG+GGG | + | tig0027814:13880-13899 | Msa1435890:CDS | 30.0% | |
| TGAAGGGAAAGAAATAAAAG+AGG | + | tig0027814:13937-13956 | Msa1435890:CDS | 30.0% | |
| !! | AGGATAAGAAAGTTGATGTT+AGG | + | tig0027814:14029-14048 | Msa1435890:CDS | 30.0% |
| AGGATAAGAAAGTCAATGAA+GGG | + | tig0027814:14065-14084 | Msa1435890:CDS | 30.0% | |
| TGAAGGGGAAAAATTAAAAG+AGG | + | tig0027814:14117-14136 | Msa1435890:CDS | 30.0% | |
| TAAAGGGGAAGAATTAAAAG+AGG | + | tig0027814:14189-14208 | Msa1435890:CDS | 30.0% | |
| TGATAAAGGGGAAGAATTAA+AGG | + | tig0027814:14186-14205 | Msa1435890:CDS | 30.0% | |
| TATTGGGGATGAAATTAAAG+AGG | + | tig0027814:14261-14280 | Msa1435890:CDS | 30.0% | |
| GAGAAGAGATTGAAAAAAAG+CGG | + | tig0027814:14517-14536 | Msa1435890:CDS | 30.0% | |
| AGAAGAGATTGAAAAAAAGC+GGG | + | tig0027814:14518-14537 | Msa1435890:CDS | 30.0% | |
| !! | AGAAAGTATTGAAAAAGGGT+GGG | + | tig0027814:14713-14732 | Msa1435890:CDS | 30.0% |
| AAAGAAAATGAAGGAACTGA+AGG | + | tig0027814:14570-14589 | Msa1435890:CDS | 30.0% | |
| ! | TAGTTTTTCTTTCACTTTGC+AGG | + | tig0027814:14957-14976 | Msa1435890:intron | 30.0% |
| ! | AGTTTTTCTTTCACTTTGCA+GGG | + | tig0027814:14958-14977 | Msa1435890:intron | 30.0% |
| ! | CCATTGGGTATATTTTCTAA+AGG | - | tig0027814:14994-15013 | Msa1435890:intergenic | 30.0% |
| ! | CCTTTAGAAAATATACCCAA+TGG | + | tig0027814:14991-15010 | Msa1435890:CDS | 30.0% |
| AAATGGAACACTATACCATT+GGG | - | tig0027814:15009-15028 | Msa1435890:intergenic | 30.0% | |
| ! | AATTAGGTTGTTCATGAAGT+AGG | - | tig0027814:15261-15280 | Msa1435890:intergenic | 30.0% |
| ATATCCTTAACTATAGAGGT+GGG | - | tig0027814:15337-15356 | Msa1435890:intergenic | 30.0% | |
| AATATCCTTAACTATAGAGG+TGG | - | tig0027814:15338-15357 | Msa1435890:intergenic | 30.0% | |
| ACCTCTATAGTTAAGGATAT+TGG | + | tig0027814:15337-15356 | Msa1435890:intron | 30.0% | |
| TCCAATATCCTTAACTATAG+AGG | - | tig0027814:15341-15360 | Msa1435890:intergenic | 30.0% | |
| TTCATCCTTAGACTGTTAAA+AGG | + | tig0027814:15364-15383 | Msa1435890:intron | 30.0% | |
| ! | TGTTTTACTATGTAATTCGC+AGG | + | tig0027814:15453-15472 | Msa1435890:intron | 30.0% |
| AAACCAAATATTGTTACTGC+AGG | + | tig0027814:15629-15648 | Msa1435890:intron | 30.0% | |
| TTTCCTGCAGTAACAATATT+TGG | - | tig0027814:15635-15654 | Msa1435890:intergenic | 30.0% | |
| AATATTGTTACTGCAGGAAA+AGG | + | tig0027814:15635-15654 | Msa1435890:intron | 30.0% | |
| ATACAACAAATGTGTCAACA+GGG | - | tig0027814:15780-15799 | Msa1435890:intergenic | 30.0% | |
| ! | ATTTTTGTAACATTACAGGC+CGG | + | tig0027814:15900-15919 | Msa1435890:intron | 30.0% |
| AACGGCATAATAAATTGCTA+CGG | - | tig0027814:15947-15966 | Msa1435890:intergenic | 30.0% | |
| CGGTAATTCATTATAGACAA+CGG | - | tig0027814:15965-15984 | Msa1435890:intergenic | 30.0% | |
| GAGGAAAAAGTTGAAAAGAA+AGG | - | tig0027814:16327-16346 | Msa1435890:intergenic | 30.0% | |
| ACAGAATAAAGTAACACACT+AGG | - | tig0027814:16353-16372 | Msa1435890:intergenic | 30.0% | |
| CCTTTAGTTGACTGAAAATA+GGG | - | tig0027814:16428-16447 | Msa1435890:intergenic | 30.0% | |
| TCCTTTAGTTGACTGAAAAT+AGG | - | tig0027814:16429-16448 | Msa1435890:intergenic | 30.0% | |
| !! | TATGGTATATTTTTCAGCGT+CGG | + | tig0027814:16619-16638 | Msa1435890:intron | 30.0% |
| GAAAGATGAAGAAAACAAAG+AGG | + | tig0027814:16710-16729 | Msa1435890:CDS | 30.0% | |
| TGACAAATCTGAAGATGAAA+AGG | + | tig0027814:16752-16771 | Msa1435890:CDS | 30.0% | |
| GGAAAAGGTTGAAAAGAAAA+GGG | - | tig0027814:16790-16809 | Msa1435890:intergenic | 30.0% | |
| GCAGAATAAAATAACACACT+AGG | - | tig0027814:16813-16832 | Msa1435890:intergenic | 30.0% | |
| ! | CTCTGAAAAATGTACCATAA+AGG | - | tig0027814:17100-17119 | Msa1435890:intergenic | 30.0% |
| !! | TATGGTACATTTTTCAGAGT+CGG | + | tig0027814:17101-17120 | Msa1435890:intron | 30.0% |
| GGGAAAAGTTTGAAAAGAAA+AGG | - | tig0027814:17267-17286 | Msa1435890:intergenic | 30.0% | |
| !! | TAGGGTATATTTTTCAGAGT+CGG | + | tig0027814:17559-17578 | Msa1435890:intron | 30.0% |
| !! | TTTAGCTTTACTTTGTGCAA+CGG | - | tig0027814:17817-17836 | Msa1435890:intergenic | 30.0% |
| TAAACAAAAAAACTGAGAGG+CGG | - | tig0027814:18056-18075 | Msa1435890:intergenic | 30.0% | |
| GGATAAACAAAAAAACTGAG+AGG | - | tig0027814:18059-18078 | Msa1435890:intergenic | 30.0% | |
| ATATGAACTACCTCTTACAA+TGG | - | tig0027814:18235-18254 | Msa1435890:intergenic | 30.0% | |
| TACATAAGAGGAAGAAGTTA+AGG | - | tig0027814:18518-18537 | Msa1435890:intergenic | 30.0% | |
| !!! | CTGTTTTTTTCCAGAAGAAA+AGG | + | tig0027814:18555-18574 | Msa1435890:intron | 30.0% |
| ATTCCTTCATCAATAACTAG+TGG | + | tig0027814:18709-18728 | Msa1435890:intron | 30.0% | |
| ATTCCACTAGTTATTGATGA+AGG | - | tig0027814:18715-18734 | Msa1435890:intergenic | 30.0% | |
| AACTTAAACCAAGGACAAAA+AGG | - | tig0027814:18927-18946 | Msa1435890:intergenic | 30.0% | |
| AGTTACACTCATTTGTAATC+TGG | - | tig0027814:18980-18999 | Msa1435890:intergenic | 30.0% | |
| !! | TTGACTAGTTATGCATTTTG+GGG | + | tig0027814:19325-19344 | Msa1435890:three_prime_UTR | 30.0% |
| CTTGTAAATCTTAACATCCA+TGG | + | tig0027814:19376-19395 | Msa1435890:three_prime_UTR | 30.0% | |
| CTTAACATCCATGGAATTTA+TGG | + | tig0027814:19385-19404 | Msa1435890:three_prime_UTR | 30.0% | |
| TAACATCCATGGAATTTATG+GGG | + | tig0027814:19387-19406 | Msa1435890:three_prime_UTR | 30.0% | |
| CACAAAAAAAATGAACCTAC+TGG | - | tig0027814:19419-19438 | Msa1435890:intergenic | 30.0% | |
| !!! | CAGTAGGTTCATTTTTTTTG+TGG | + | tig0027814:19417-19436 | Msa1435890:three_prime_UTR | 30.0% |
| !!! | TAGGTTCATTTTTTTTGTGG+TGG | + | tig0027814:19420-19439 | Msa1435890:three_prime_UTR | 30.0% |
| !! | ACTTGTTTTCAACTTGGCAT+TGG | + | tig0027814:13174-13193 | Msa1435890:five_prime_UTR | 35.0% |
| ATTGTGAAATGGTGACTATG+GGG | - | tig0027814:13333-13352 | Msa1435890:intergenic | 35.0% | |
| ! | TGTGACCTTCAATAAGCTTT+TGG | - | tig0027814:13488-13507 | Msa1435890:intergenic | 35.0% |
| ATGTTATCTAAGCACTTCAC+TGG | - | tig0027814:13617-13636 | Msa1435890:intergenic | 35.0% | |
| ! | GTGAAGTGCTTAGATAACAT+TGG | + | tig0027814:13617-13636 | Msa1435890:five_prime_UTR | 35.0% |
| !!! | GTTTTGGAAGCTGTATTAAC+TGG | - | tig0027814:13659-13678 | Msa1435890:intergenic | 35.0% |
| ! | TCAAAGATTTTTCCTCCCTT+AGG | - | tig0027814:13740-13759 | Msa1435890:intergenic | 35.0% |
| TAAGGGAGGAAAAATCTTTG+AGG | + | tig0027814:13739-13758 | Msa1435890:CDS | 35.0% | |
| TGCTGTCAAAGATTTGAAAG+AGG | + | tig0027814:13766-13785 | Msa1435890:CDS | 35.0% | |
| GTCAAAGATTTGAAAGAGGA+TGG | + | tig0027814:13770-13789 | Msa1435890:CDS | 35.0% | |
| AGAGGATGGTATAAAAGCAA+TGG | + | tig0027814:13784-13803 | Msa1435890:CDS | 35.0% | |
| AGGATGAGAAAGTTGTTGAA+GGG | + | tig0027814:13921-13940 | Msa1435890:CDS | 35.0% | |
| TGAAGGAGAAGAACTAAAAG+AGG | + | tig0027814:13973-13992 | Msa1435890:CDS | 35.0% | |
| AGGATAAGAAAGACGATGTA+GGG | + | tig0027814:13993-14012 | Msa1435890:CDS | 35.0% | |
| GAGGATAAGAAAGTCAATGA+AGG | + | tig0027814:14064-14083 | Msa1435890:CDS | 35.0% | |
| GGATAAGAAAGTCAATGAAG+GGG | + | tig0027814:14066-14085 | Msa1435890:CDS | 35.0% | |
| GATAAGAAAGTCAATGAAGG+GGG | + | tig0027814:14067-14086 | Msa1435890:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | tig0027814:14173-14192 | Msa1435890:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | tig0027814:14173-14192 | Msa1435890:CDS | 35.0% | |
| TAAAGGGGAAGAATTAAAGG+AGG | + | tig0027814:14225-14244 | Msa1435890:CDS | 35.0% | |
| TGAGAATGACAAATTCAGTG+AGG | + | tig0027814:14309-14328 | Msa1435890:CDS | 35.0% | |
| TATCCTTGAAAGCAAAGATG+AGG | + | tig0027814:14408-14427 | Msa1435890:CDS | 35.0% | |
| ATCCTTGAAAGCAAAGATGA+GGG | + | tig0027814:14409-14428 | Msa1435890:CDS | 35.0% | |
| GAAAAATCAAGAAGACAGAG+AGG | + | tig0027814:14444-14463 | Msa1435890:CDS | 35.0% | |
| AGATTGAAAAAAAGCGGGAA+AGG | + | tig0027814:14523-14542 | Msa1435890:CDS | 35.0% | |
| ! | CTTTTCAATGCTCTCATCTT+TGG | - | tig0027814:14617-14636 | Msa1435890:intergenic | 35.0% |
| !! | CAAAGATGAGAGCATTGAAA+AGG | + | tig0027814:14615-14634 | Msa1435890:CDS | 35.0% |
| !! | GAGAAAGTATTGAAAAAGGG+TGG | + | tig0027814:14712-14731 | Msa1435890:CDS | 35.0% |
| GAAGGCGAAAAAGAAAATGA+AGG | + | tig0027814:14750-14769 | Msa1435890:CDS | 35.0% | |
| CAAATGGAACACTATACCAT+TGG | - | tig0027814:15010-15029 | Msa1435890:intergenic | 35.0% | |
| AGAAGCAGAAACACGTATAT+AGG | - | tig0027814:15107-15126 | Msa1435890:intergenic | 35.0% | |
| TACAAAAGAGGATTGTATGG+AGG | - | tig0027814:15221-15240 | Msa1435890:intergenic | 35.0% | |
| ! | TCCATACAATCCTCTTTTGT+AGG | + | tig0027814:15220-15239 | Msa1435890:CDS | 35.0% |
| TCCTACAAAAGAGGATTGTA+TGG | - | tig0027814:15224-15243 | Msa1435890:intergenic | 35.0% | |
| TATCCTTAACTATAGAGGTG+GGG | - | tig0027814:15336-15355 | Msa1435890:intergenic | 35.0% | |
| ! | GGTAACCTTTTAACAGTCTA+AGG | - | tig0027814:15372-15391 | Msa1435890:intergenic | 35.0% |
| !!! | TAAGGTTTTCTGGTTTTGTG+TGG | + | tig0027814:15500-15519 | Msa1435890:CDS | 35.0% |
| ! | TTTTGTGTGGCATGAAAATG+AGG | + | tig0027814:15513-15532 | Msa1435890:CDS | 35.0% |
| ! | TATGTTTGTAACTTGCAACC+AGG | + | tig0027814:15536-15555 | Msa1435890:intron | 35.0% |
| ATGTAACAAAGAGAAGTTGC+TGG | + | tig0027814:15689-15708 | Msa1435890:CDS | 35.0% | |
| CAAATACAAGGAAGGTTTGT+TGG | + | tig0027814:15748-15767 | Msa1435890:intron | 35.0% | |
| CATACAACAAATGTGTCAAC+AGG | - | tig0027814:15781-15800 | Msa1435890:intergenic | 35.0% | |
| !! | CTGTTGACACATTTGTTGTA+TGG | + | tig0027814:15779-15798 | Msa1435890:intron | 35.0% |
| ACGACACGAGTATAATATTC+TGG | - | tig0027814:16087-16106 | Msa1435890:intergenic | 35.0% | |
| !! | AGTCAACAAAAAAGGCATCA+AGG | - | tig0027814:16150-16169 | Msa1435890:intergenic | 35.0% |
| ATCACTTGCAGAACAAGAAA+AGG | + | tig0027814:16288-16307 | Msa1435890:CDS | 35.0% | |
| AAAGTAACACACTAGGTTAG+AGG | - | tig0027814:16346-16365 | Msa1435890:intergenic | 35.0% | |
| ! | CCCTATTTTCAGTCAACTAA+AGG | + | tig0027814:16425-16444 | Msa1435890:intron | 35.0% |
| GGGAAAAGGTTGAAAAGAAA+AGG | - | tig0027814:16791-16810 | Msa1435890:intergenic | 35.0% | |
| AAATAACACACTAGGGGAAA+AGG | - | tig0027814:16805-16824 | Msa1435890:intergenic | 35.0% | |
| ! | TCCTTTTATCAGTCGAGTAA+AGG | + | tig0027814:16885-16904 | Msa1435890:intron | 35.0% |
| TCCTTTACTCGACTGATAAA+AGG | - | tig0027814:16889-16908 | Msa1435890:intergenic | 35.0% | |
| AAACAAGGTTCATCAAGATC+TGG | + | tig0027814:16930-16949 | Msa1435890:CDS | 35.0% | |
| AAACAAAGTTCATCGAGATC+TGG | + | tig0027814:17406-17425 | Msa1435890:CDS | 35.0% | |
| GAGAAAAGGATTTACTGACA+CGG | + | tig0027814:17614-17633 | Msa1435890:CDS | 35.0% | |
| ! | TTTTCATCCTTGGATTTGTC+AGG | - | tig0027814:17702-17721 | Msa1435890:intergenic | 35.0% |
| ATGAGAAGAAAGTGAGTGAA+AGG | + | tig0027814:17763-17782 | Msa1435890:CDS | 35.0% | |
| TTCTTCCTTGAAAAGACCTT+GGG | - | tig0027814:17942-17961 | Msa1435890:intergenic | 35.0% | |
| GAGGAAGAAGTTAAGGTAAT+GGG | - | tig0027814:18511-18530 | Msa1435890:intergenic | 35.0% | |
| AGAGGAAGAAGTTAAGGTAA+TGG | - | tig0027814:18512-18531 | Msa1435890:intergenic | 35.0% | |
| ATAAATTACGCCTCTAGTGA+AGG | + | tig0027814:18799-18818 | Msa1435890:intron | 35.0% | |
| !! | CGGAGAATTTTGAAGATAGA+AGG | + | tig0027814:19039-19058 | Msa1435890:intron | 35.0% |
| AAAATTGCTGACCATTGTTC+AGG | + | tig0027814:19126-19145 | Msa1435890:intron | 35.0% | |
| TCTTTACAGATGCCTTTCTT+GGG | - | tig0027814:19176-19195 | Msa1435890:intergenic | 35.0% | |
| GACTGCTTGGATATATACAT+AGG | + | tig0027814:19291-19310 | Msa1435890:three_prime_UTR | 35.0% | |
| GCATGAAACTGCATAATTAC+TGG | - | tig0027814:19460-19479 | Msa1435890:intergenic | 35.0% | |
| ! | ATGTAAAGAAGCTTTTGTGG+AGG | + | tig0027814:19497-19516 | Msa1435890:three_prime_UTR | 35.0% |
| CATCACTGTTTCAAACAGGT+TGG | - | tig0027814:13253-13272 | Msa1435890:intergenic | 40.0% | |
| TTGTGAAATGGTGACTATGG+GGG | - | tig0027814:13332-13351 | Msa1435890:intergenic | 40.0% | |
| AGATAACATTGGCATGAGTG+AGG | + | tig0027814:13628-13647 | Msa1435890:exon | 40.0% | |
| ! | TCTTTTCACTCGAGTCTTCT+AGG | - | tig0027814:13706-13725 | Msa1435890:intergenic | 40.0% |
| AGAAGACTCGAGTGAAAAGA+AGG | + | tig0027814:13706-13725 | Msa1435890:CDS | 40.0% | |
| ! | ATTTTTCCTCCCTTAGGTTC+CGG | - | tig0027814:13734-13753 | Msa1435890:intergenic | 40.0% |
| ATGGATAAGCAAGCTGATGA+TGG | + | tig0027814:13845-13864 | Msa1435890:CDS | 40.0% | |
| AACAATAACAAAACCGGGGA+TGG | + | tig0027814:13884-13903 | Msa1435890:CDS | 40.0% | |
| ACAATAACAAAACCGGGGAT+GGG | + | tig0027814:13885-13904 | Msa1435890:CDS | 40.0% | |
| GAGGATGAGAAAGTTGTTGA+AGG | + | tig0027814:13920-13939 | Msa1435890:CDS | 40.0% | |
| GAGGATAAGAAAGACGATGT+AGG | + | tig0027814:13992-14011 | Msa1435890:CDS | 40.0% | |
| GGATAAGAAAGACGATGTAG+GGG | + | tig0027814:13994-14013 | Msa1435890:CDS | 40.0% | |
| TGTAGGGGAAGAAAGAAAAG+AGG | + | tig0027814:14009-14028 | Msa1435890:CDS | 40.0% | |
| !! | GAAAGTTGATGTTAGGCAAG+AGG | + | tig0027814:14036-14055 | Msa1435890:CDS | 40.0% |
| TGTTAGGCAAGAGGTAAAAG+AGG | + | tig0027814:14045-14064 | Msa1435890:CDS | 40.0% | |
| AGGATAAGAAAGACGATGCA+GGG | + | tig0027814:14137-14156 | Msa1435890:CDS | 40.0% | |
| TGCAGGGGTAGAATTAAAAG+AGG | + | tig0027814:14153-14172 | Msa1435890:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | tig0027814:14172-14191 | Msa1435890:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | tig0027814:14174-14193 | Msa1435890:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | tig0027814:14172-14191 | Msa1435890:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | tig0027814:14174-14193 | Msa1435890:CDS | 40.0% | |
| TCATCCATGGCATCTAATTC+AGG | - | tig0027814:14382-14401 | Msa1435890:intergenic | 40.0% | |
| AAGGATACTCTCTTCATCCA+TGG | - | tig0027814:14395-14414 | Msa1435890:intergenic | 40.0% | |
| AGAAGACAGAGAGGATGATA+AGG | + | tig0027814:14453-14472 | Msa1435890:CDS | 40.0% | |
| CAGAGAGGATGATAAGGATA+AGG | + | tig0027814:14459-14478 | Msa1435890:CDS | 40.0% | |
| GAAAAAAAGCGGGAAAGGAA+AGG | + | tig0027814:14528-14547 | Msa1435890:CDS | 40.0% | |
| GAAGGAACTGAAGAAGATAG+AGG | + | tig0027814:14579-14598 | Msa1435890:CDS | 40.0% | |
| AAAGGAGAAAAGTCGAGATG+AGG | + | tig0027814:14633-14652 | Msa1435890:CDS | 40.0% | |
| GAAAATGAAGGAACTGAAGG+AGG | + | tig0027814:14762-14781 | Msa1435890:CDS | 40.0% | |
| ATTTCCTTTCACGTACAGGA+CGG | - | tig0027814:14813-14832 | Msa1435890:intergenic | 40.0% | |
| ! | ACTGATTTCCTTTCACGTAC+AGG | - | tig0027814:14817-14836 | Msa1435890:intergenic | 40.0% |
| GTGAAAGGAAATCAGTTCAG+CGG | + | tig0027814:14821-14840 | Msa1435890:CDS | 40.0% | |
| ! | TCTTGCGTTTTATGCTTCAG+TGG | + | tig0027814:15152-15171 | Msa1435890:CDS | 40.0% |
| ! | ACAATCCTCTTTTGTAGGAG+AGG | + | tig0027814:15225-15244 | Msa1435890:CDS | 40.0% |
| CTTGTATTTGCATTCCCAAC+TGG | - | tig0027814:15738-15757 | Msa1435890:intergenic | 40.0% | |
| CAGTTGGGAATGCAAATACA+AGG | + | tig0027814:15736-15755 | Msa1435890:CDS | 40.0% | |
| TGGGAATGCAAATACAAGGA+AGG | + | tig0027814:15740-15759 | Msa1435890:CDS | 40.0% | |
| !! | AAAAGGCATCAAGGACTGAT+TGG | - | tig0027814:16141-16160 | Msa1435890:intergenic | 40.0% |
| TGCGAAGCTAATAGACTTTC+TGG | + | tig0027814:16240-16259 | Msa1435890:CDS | 40.0% | |
| !! | GATACACTTGTTGTGACTTG+AGG | - | tig0027814:16271-16290 | Msa1435890:intergenic | 40.0% |
| AAACAGCGCATAGCAAAACA+AGG | + | tig0027814:16449-16468 | Msa1435890:CDS | 40.0% | |
| ATAGCAAAACAAGGCTCAAC+AGG | + | tig0027814:16458-16477 | Msa1435890:CDS | 40.0% | |
| TCTGCTAAGGTGAGATTTCA+TGG | + | tig0027814:16506-16525 | Msa1435890:intron | 40.0% | |
| TAACTTGAGACGAGTGTTTC+TGG | + | tig0027814:16835-16854 | Msa1435890:intron | 40.0% | |
| ATCATCAAGACGTTCTGCTA+AGG | + | tig0027814:16959-16978 | Msa1435890:CDS | 40.0% | |
| CAAATCCAAGGATGAAAAGC+CGG | + | tig0027814:17704-17723 | Msa1435890:CDS | 40.0% | |
| ! | TGCAACGGATTCTTTCTTTC+TGG | - | tig0027814:17802-17821 | Msa1435890:intergenic | 40.0% |
| AGTTAAAGCAAAACCACGCT+CGG | + | tig0027814:17845-17864 | Msa1435890:CDS | 40.0% | |
| TGAGTCGACAATGGTTTCTT+GGG | - | tig0027814:17885-17904 | Msa1435890:intergenic | 40.0% | |
| TCCATCACTATCACCATGAT+CGG | - | tig0027814:17916-17935 | Msa1435890:intergenic | 40.0% | |
| CTTCTTCCTTGAAAAGACCT+TGG | - | tig0027814:17943-17962 | Msa1435890:intergenic | 40.0% | |
| ! | TTTGTCTTTGGAGGAAGACT+TGG | - | tig0027814:18006-18025 | Msa1435890:intergenic | 40.0% |
| GTATCTACCTGCTTTGTCTT+TGG | - | tig0027814:18018-18037 | Msa1435890:intergenic | 40.0% | |
| AGGGAATAATCTATTTGGGC+TGG | - | tig0027814:18369-18388 | Msa1435890:intergenic | 40.0% | |
| ACTAATCACTAGAACGCGAA+AGG | - | tig0027814:18435-18454 | Msa1435890:intergenic | 40.0% | |
| ! | CTTTCGGTAACCTTTTCTTC+TGG | - | tig0027814:18568-18587 | Msa1435890:intergenic | 40.0% |
| TTGCGTAACTGATCATCACT+CGG | - | tig0027814:18619-18638 | Msa1435890:intergenic | 40.0% | |
| CAACAGAAAACCTTCACTAG+AGG | - | tig0027814:18812-18831 | Msa1435890:intergenic | 40.0% | |
| ACCGAGTAGCTTCAAAATGT+CGG | - | tig0027814:18883-18902 | Msa1435890:intergenic | 40.0% | |
| CGAATTGCTTACCTGAACAA+TGG | - | tig0027814:19140-19159 | Msa1435890:intergenic | 40.0% | |
| CTTTACAGATGCCTTTCTTG+GGG | - | tig0027814:19175-19194 | Msa1435890:intergenic | 40.0% | |
| GTCTTTACAGATGCCTTTCT+TGG | - | tig0027814:19177-19196 | Msa1435890:intergenic | 40.0% | |
| GACTATTATTCAGCAAGAGC+TGG | + | tig0027814:19194-19213 | Msa1435890:CDS | 40.0% | |
| CTTGTTCCCCATAAATTCCA+TGG | - | tig0027814:19396-19415 | Msa1435890:intergenic | 40.0% | |
| ! | GAAGCTTTTGTGGAGGATTT+TGG | + | tig0027814:19504-19523 | Msa1435890:three_prime_UTR | 40.0% |
| TTTCACTCGAGTCTTCTAGG+TGG | - | tig0027814:13703-13722 | Msa1435890:intergenic | 45.0% | |
| ! | TTTTTCCTCCCTTAGGTTCC+GGG | - | tig0027814:13733-13752 | Msa1435890:intergenic | 45.0% |
| TGATAAGAAAGCTGATGGGG+AGG | + | tig0027814:13811-13830 | Msa1435890:CDS | 45.0% | |
| TGGGGAGGAAGAACTAGAAA+TGG | + | tig0027814:13826-13845 | Msa1435890:CDS | 45.0% | |
| CAATAACAAAACCGGGGATG+GGG | + | tig0027814:13886-13905 | Msa1435890:CDS | 45.0% | |
| ! | TTTTATTCCTTCCCCATCCC+CGG | - | tig0027814:13900-13919 | Msa1435890:intergenic | 45.0% |
| GGATGGGGAAGGAATAAAAG+AGG | + | tig0027814:13901-13920 | Msa1435890:CDS | 45.0% | |
| TGAAGGGGGAGAGATAAAAG+AGG | + | tig0027814:14081-14100 | Msa1435890:CDS | 45.0% | |
| GAAGGGGGAGAGATAAAAGA+GGG | + | tig0027814:14082-14101 | Msa1435890:CDS | 45.0% | |
| AAGGGGGAGAGATAAAAGAG+GGG | + | tig0027814:14083-14102 | Msa1435890:CDS | 45.0% | |
| AGGGGAAGAAAGCTGATGAA+GGG | + | tig0027814:14101-14120 | Msa1435890:CDS | 45.0% | |
| GAGGATAAGAAAGACGATGC+AGG | + | tig0027814:14136-14155 | Msa1435890:CDS | 45.0% | |
| GGATAAGAAAGACGATGCAG+GGG | + | tig0027814:14138-14157 | Msa1435890:CDS | 45.0% | |
| GAAGCCTGAATTAGATGCCA+TGG | + | tig0027814:14375-14394 | Msa1435890:CDS | 45.0% | |
| TGCCCTCATCTTTGCTTTCA+AGG | - | tig0027814:14414-14433 | Msa1435890:intergenic | 45.0% | |
| CAAAGATGAGGGCAGTGAAA+AGG | + | tig0027814:14420-14439 | Msa1435890:CDS | 45.0% | |
| ! | TGCTCTCATCTTTGGCTTCA+GGG | - | tig0027814:14609-14628 | Msa1435890:intergenic | 45.0% |
| ! | ATGCTCTCATCTTTGGCTTC+AGG | - | tig0027814:14610-14629 | Msa1435890:intergenic | 45.0% |
| AAAAGTCGAGATGAGGAGGT+GGG | + | tig0027814:14640-14659 | Msa1435890:CDS | 45.0% | |
| GTATTGAAAAAGGGTGGGAG+AGG | + | tig0027814:14718-14737 | Msa1435890:CDS | 45.0% | |
| AAGGAAATCAGTTCAGCGGT+TGG | + | tig0027814:14825-14844 | Msa1435890:CDS | 45.0% | |
| CCTTTCCTCTCCTACAAAAG+AGG | - | tig0027814:15233-15252 | Msa1435890:intergenic | 45.0% | |
| ! | CCTCTTTTGTAGGAGAGGAA+AGG | + | tig0027814:15230-15249 | Msa1435890:CDS | 45.0% |
| TCACCCCACCTCTATAGTTA+AGG | + | tig0027814:15330-15349 | Msa1435890:intron | 45.0% | |
| ATCTGCTTGACGTACCAGTT+GGG | + | tig0027814:15721-15740 | Msa1435890:CDS | 45.0% | |
| !! | ACATTTGTTGTATGGCAGCC+TGG | + | tig0027814:15787-15806 | Msa1435890:intron | 45.0% |
| CGACTATTATCAGCATTGCC+AGG | - | tig0027814:15808-15827 | Msa1435890:intergenic | 45.0% | |
| CGTATTCATGCTGTACGCTT+TGG | + | tig0027814:15826-15845 | Msa1435890:intron | 45.0% | |
| TGAGTACGATGCATCTGTCA+AGG | + | tig0027814:16110-16129 | Msa1435890:intron | 45.0% | |
| CTACTCAAGACGAGTGTATC+TGG | + | tig0027814:16375-16394 | Msa1435890:intron | 45.0% | |
| AAACAAGGCTCAACAGGATC+TGG | + | tig0027814:16464-16483 | Msa1435890:CDS | 45.0% | |
| TTAGCAGATCGTCTTGACGT+TGG | - | tig0027814:16494-16513 | Msa1435890:intergenic | 45.0% | |
| AACGTCAAGACGATCTGCTA+AGG | + | tig0027814:16493-16512 | Msa1435890:CDS | 45.0% | |
| CGCAAGCGCATAGAAAAACA+AGG | + | tig0027814:16915-16934 | Msa1435890:CDS | 45.0% | |
| TTACTTGAGACGAGCGTTTC+TGG | + | tig0027814:17311-17330 | Msa1435890:intron | 45.0% | |
| TGAAGATTCTTCCGTAGCAG+AGG | + | tig0027814:17590-17609 | Msa1435890:CDS | 45.0% | |
| ! | TCCTTTTCTCTCCTCTGCTA+CGG | - | tig0027814:17604-17623 | Msa1435890:intergenic | 45.0% |
| TGAGTCTGAGGAAGAACAGA+AGG | + | tig0027814:17641-17660 | Msa1435890:CDS | 45.0% | |
| CACTGTTCCTGACAAATCCA+AGG | + | tig0027814:17692-17711 | Msa1435890:CDS | 45.0% | |
| ! | TTTCTCCGGCTTTTCATCCT+TGG | - | tig0027814:17712-17731 | Msa1435890:intergenic | 45.0% |
| AAGCCGGAGAAATCTGAAAG+TGG | + | tig0027814:17720-17739 | Msa1435890:CDS | 45.0% | |
| AGCCGGAGAAATCTGAAAGT+GGG | + | tig0027814:17721-17740 | Msa1435890:CDS | 45.0% | |
| TCCCCACTTTCAGATTTCTC+CGG | - | tig0027814:17726-17745 | Msa1435890:intergenic | 45.0% | |
| GTGAGTCGACAATGGTTTCT+TGG | - | tig0027814:17886-17905 | Msa1435890:intergenic | 45.0% | |
| ! | TCCGATCATGGTGATAGTGA+TGG | + | tig0027814:17912-17931 | Msa1435890:CDS | 45.0% |
| ! | TGATAGTGATGGAAGTCCCA+AGG | + | tig0027814:17923-17942 | Msa1435890:CDS | 45.0% |
| ! | GAAGTCCCAAGGTCTTTTCA+AGG | + | tig0027814:17934-17953 | Msa1435890:CDS | 45.0% |
| TCTTCCTCCAAAGACAAAGC+AGG | + | tig0027814:18008-18027 | Msa1435890:CDS | 45.0% | |
| TCTACCTGCTTTGTCTTTGG+AGG | - | tig0027814:18015-18034 | Msa1435890:intergenic | 45.0% | |
| TGCGTAACTGATCATCACTC+GGG | - | tig0027814:18618-18637 | Msa1435890:intergenic | 45.0% | |
| !! | ACATTTTCTCCCGCTTTTGC+AGG | + | tig0027814:18848-18867 | Msa1435890:intron | 45.0% |
| CAAATGTAGCCTGCAAAAGC+GGG | - | tig0027814:18860-18879 | Msa1435890:intergenic | 45.0% | |
| GCAAATGTAGCCTGCAAAAG+CGG | - | tig0027814:18861-18880 | Msa1435890:intergenic | 45.0% | |
| !!! | GCCGACATTTTGAAGCTACT+CGG | + | tig0027814:18879-18898 | Msa1435890:CDS | 45.0% |
| TTCAGGTAAGCAATTCGACG+TGG | + | tig0027814:19143-19162 | Msa1435890:intron | 45.0% | |
| AAGAGAACGAAGAGAACGAC+AGG | + | tig0027814:19242-19261 | Msa1435890:CDS | 45.0% | |
| AGAGAACGAAGAGAACGACA+GGG | + | tig0027814:19243-19262 | Msa1435890:CDS | 45.0% | |
| AAGCAGTCACACCTAATCCT+CGG | - | tig0027814:19279-19298 | Msa1435890:intergenic | 45.0% | |
| TTTATGGGGAACAAGCCAGT+AGG | + | tig0027814:19401-19420 | Msa1435890:three_prime_UTR | 45.0% | |
| CTCGAGTGAAAAGAAGGACC+CGG | + | tig0027814:13712-13731 | Msa1435890:CDS | 50.0% | |
| AAAGAAGGACCCGGAACCTA+AGG | + | tig0027814:13721-13740 | Msa1435890:CDS | 50.0% | |
| AAGAAGGACCCGGAACCTAA+GGG | + | tig0027814:13722-13741 | Msa1435890:CDS | 50.0% | |
| GAGGACAAGCATGCTGATGA+AGG | + | tig0027814:13956-13975 | Msa1435890:CDS | 50.0% | |
| GAGGGGAAGAAAGCTGATGA+AGG | + | tig0027814:14100-14119 | Msa1435890:CDS | 50.0% | |
| GGGGAAGAAAGCTGATGAAG+GGG | + | tig0027814:14102-14121 | Msa1435890:CDS | 50.0% | |
| AGCGGGAAAGGAAAGGTTGA+TGG | + | tig0027814:14535-14554 | Msa1435890:CDS | 50.0% | |
| ! | GCGGGAAAGGAAAGGTTGAT+GGG | + | tig0027814:14536-14555 | Msa1435890:CDS | 50.0% |
| !! | CGGGAAAGGAAAGGTTGATG+GGG | + | tig0027814:14537-14556 | Msa1435890:CDS | 50.0% |
| GGAGAAAAGTCGAGATGAGG+AGG | + | tig0027814:14636-14655 | Msa1435890:CDS | 50.0% | |
| GAAAAGTCGAGATGAGGAGG+TGG | + | tig0027814:14639-14658 | Msa1435890:CDS | 50.0% | |
| AAAGGGTGGGAGAGGAAATG+TGG | + | tig0027814:14726-14745 | Msa1435890:CDS | 50.0% | |
| TGGGAGAGGAAATGTGGAGA+AGG | + | tig0027814:14732-14751 | Msa1435890:CDS | 50.0% | |
| ! | CGGTTGGTTGTAGGAGTTGT+TGG | - | tig0027814:14793-14812 | Msa1435890:intergenic | 50.0% |
| TCTTTCACTTTGCAGGGTCG+TGG | + | tig0027814:14964-14983 | Msa1435890:intron | 50.0% | |
| GATCTGCTTGACGTACCAGT+TGG | + | tig0027814:15720-15739 | Msa1435890:CDS | 50.0% | |
| CTTAGCAGAACGTCTTGACG+TGG | - | tig0027814:17437-17456 | Msa1435890:intergenic | 50.0% | |
| CACGTCAAGACGTTCTGCTA+AGG | + | tig0027814:17435-17454 | Msa1435890:CDS | 50.0% | |
| TCCGTAGCAGAGGAGAGAAA+AGG | + | tig0027814:17600-17619 | Msa1435890:CDS | 50.0% | |
| TGACACGGAAGATGAGTCTG+AGG | + | tig0027814:17629-17648 | Msa1435890:CDS | 50.0% | |
| GCCGGAGAAATCTGAAAGTG+GGG | + | tig0027814:17722-17741 | Msa1435890:CDS | 50.0% | |
| GATGCAGAGTGAGTCGACAA+TGG | - | tig0027814:17894-17913 | Msa1435890:intergenic | 50.0% | |
| ACTCACTCTGCATCCGATCA+TGG | + | tig0027814:17900-17919 | Msa1435890:CDS | 50.0% | |
| !! | GGAAGACTTGGTGAGAGTTG+AGG | - | tig0027814:17994-18013 | Msa1435890:intergenic | 50.0% |
| GTAATGCCTGACCGAGGATT+AGG | + | tig0027814:19265-19284 | Msa1435890:exon | 50.0% | |
| GAGGATTAGGTGTGACTGCT+TGG | + | tig0027814:19278-19297 | Msa1435890:three_prime_UTR | 50.0% | |
| AACAAAACCGGGGATGGGGA+AGG | + | tig0027814:13890-13909 | Msa1435890:CDS | 55.0% | |
| AGATGAGGAGGTGGGCGATA+AGG | + | tig0027814:14648-14667 | Msa1435890:CDS | 55.0% | |
| GGAGGTGGGCGATAAGGATA+AGG | + | tig0027814:14654-14673 | Msa1435890:CDS | 55.0% | |
| ! | CGTACAGGACGGTTGGTTGT+AGG | - | tig0027814:14802-14821 | Msa1435890:intergenic | 55.0% |
| CCTTTCACGTACAGGACGGT+TGG | - | tig0027814:14809-14828 | Msa1435890:intergenic | 55.0% | |
| CCAACCGTCCTGTACGTGAA+AGG | + | tig0027814:14806-14825 | Msa1435890:CDS | 55.0% | |
| AAAACCACGCTCGGCACGAA+AGG | + | tig0027814:17854-17873 | Msa1435890:CDS | 55.0% | |
| AAACCACGCTCGGCACGAAA+GGG | + | tig0027814:17855-17874 | Msa1435890:CDS | 55.0% | |
| CGTGGATCTCACCCCAAGAA+AGG | + | tig0027814:19161-19180 | Msa1435890:CDS | 55.0% | |
| GTCACACCTAATCCTCGGTC+AGG | - | tig0027814:19274-19293 | Msa1435890:intergenic | 55.0% | |
| AAGGACCCGGAACCTAAGGG+AGG | + | tig0027814:13725-13744 | Msa1435890:CDS | 60.0% | |
| GACAGGGTAATGCCTGACCG+AGG | + | tig0027814:19259-19278 | Msa1435890:exon | 60.0% | |
| GTTCCCTTTCGTGCCGAGCG+TGG | - | tig0027814:17861-17880 | Msa1435890:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027814 | gene | 13097 | 19600 | 13097 | ID=Msa1435890;Name=Msa1435890 |
| tig0027814 | mRNA | 13097 | 19600 | 13097 | ID=Msa1435890-mRNA-1;Parent=Msa1435890;Name=Msa1435890-mRNA-1;_AED=0.10;_eAED=0.10;_QI=457|0.93|0.93|1|0.93|0.87|16|325|964 |
| tig0027814 | exon | 13097 | 13501 | 13097 | ID=Msa1435890-mRNA-1:exon:9957;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 13589 | 14894 | 13589 | ID=Msa1435890-mRNA-1:exon:9958;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 14979 | 15012 | 14979 | ID=Msa1435890-mRNA-1:exon:9959;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 15136 | 15251 | 15136 | ID=Msa1435890-mRNA-1:exon:9960;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 15475 | 15534 | 15475 | ID=Msa1435890-mRNA-1:exon:9961;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 15651 | 15761 | 15651 | ID=Msa1435890-mRNA-1:exon:9962;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 16229 | 16309 | 16229 | ID=Msa1435890-mRNA-1:exon:9963;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 16437 | 16514 | 16437 | ID=Msa1435890-mRNA-1:exon:9964;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 16636 | 16773 | 16636 | ID=Msa1435890-mRNA-1:exon:9965;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 16897 | 16980 | 16897 | ID=Msa1435890-mRNA-1:exon:9966;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 17118 | 17249 | 17118 | ID=Msa1435890-mRNA-1:exon:9967;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 17373 | 17456 | 17373 | ID=Msa1435890-mRNA-1:exon:9968;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 17576 | 18029 | 17576 | ID=Msa1435890-mRNA-1:exon:9969;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 18569 | 18678 | 18569 | ID=Msa1435890-mRNA-1:exon:9970;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 18870 | 18900 | 18870 | ID=Msa1435890-mRNA-1:exon:9971;Parent=Msa1435890-mRNA-1 |
| tig0027814 | exon | 19148 | 19600 | 19148 | ID=Msa1435890-mRNA-1:exon:9972;Parent=Msa1435890-mRNA-1 |
| tig0027814 | five_prime_UTR | 13097 | 13501 | 13097 | ID=Msa1435890-mRNA-1:five_prime_utr;Parent=Msa1435890-mRNA-1 |
| tig0027814 | five_prime_UTR | 13589 | 13640 | 13589 | ID=Msa1435890-mRNA-1:five_prime_utr;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 13641 | 14894 | 13641 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 14979 | 15012 | 14979 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 15136 | 15251 | 15136 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 15475 | 15534 | 15475 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 15651 | 15761 | 15651 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 16229 | 16309 | 16229 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 16437 | 16514 | 16437 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 16636 | 16773 | 16636 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 16897 | 16980 | 16897 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 17118 | 17249 | 17118 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 17373 | 17456 | 17373 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 17576 | 18029 | 17576 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 18569 | 18678 | 18569 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 18870 | 18900 | 18870 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | CDS | 19148 | 19275 | 19148 | ID=Msa1435890-mRNA-1:cds;Parent=Msa1435890-mRNA-1 |
| tig0027814 | three_prime_UTR | 19276 | 19600 | 19276 | ID=Msa1435890-mRNA-1:three_prime_utr;Parent=Msa1435890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
