Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864300 | XP_024639466.1 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864300 | sp|F4K4Y5|DEKP4_ARATH | 52.261 | 199 | 78 | 4 | 365 | 558 | 301 | 487 | 5.52e-52 | 199 |
| Msa0864300 | sp|F4K4Y5|DEKP4_ARATH | 41.361 | 191 | 105 | 3 | 763 | 948 | 554 | 742 | 4.33e-23 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864300 | A0A396HZU8 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020930 | Msa0864300 | 0.854759 | 9.934586e-62 | -8.615850e-47 |
| Msa0031340 | Msa0864300 | 0.823520 | 1.325376e-53 | -8.615850e-47 |
| Msa0032920 | Msa0864300 | -0.821598 | 3.707818e-53 | -8.615850e-47 |
| Msa0032960 | Msa0864300 | -0.827624 | 1.411317e-54 | -8.615850e-47 |
| Msa0045790 | Msa0864300 | 0.817560 | 3.095180e-52 | -8.615850e-47 |
| Msa0046160 | Msa0864300 | 0.820925 | 5.299992e-53 | -8.615850e-47 |
| Msa0068680 | Msa0864300 | 0.843300 | 1.525562e-58 | -8.615850e-47 |
| Msa0078650 | Msa0864300 | 0.822670 | 2.092459e-53 | -8.615850e-47 |
| Msa0094120 | Msa0864300 | 0.812606 | 3.895993e-51 | -8.615850e-47 |
| Msa0114060 | Msa0864300 | 0.825749 | 3.955572e-54 | -8.615850e-47 |
| Msa0606720 | Msa0864300 | 0.807219 | 5.625649e-50 | -8.615850e-47 |
| Msa0606730 | Msa0864300 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
| Msa0616160 | Msa0864300 | 0.811530 | 6.686613e-51 | -8.615850e-47 |
| Msa0626450 | Msa0864300 | 0.813964 | 1.960138e-51 | -8.615850e-47 |
| Msa0626490 | Msa0864300 | 0.819024 | 1.443272e-52 | -8.615850e-47 |
| Msa0627450 | Msa0864300 | 0.830584 | 2.704778e-55 | -8.615850e-47 |
| Msa0639430 | Msa0864300 | 0.802551 | 5.316221e-49 | -8.615850e-47 |
| Msa0655560 | Msa0864300 | 0.806546 | 7.803907e-50 | -8.615850e-47 |
| Msa0662340 | Msa0864300 | 0.819960 | 8.824189e-53 | -8.615850e-47 |
| Msa0664600 | Msa0864300 | 0.809420 | 1.908851e-50 | -8.615850e-47 |
| Msa0677410 | Msa0864300 | 0.805333 | 1.404063e-49 | -8.615850e-47 |
| Msa0682330 | Msa0864300 | 0.817826 | 2.695274e-52 | -8.615850e-47 |
| Msa0683510 | Msa0864300 | 0.815451 | 9.181706e-52 | -8.615850e-47 |
| Msa0689520 | Msa0864300 | 0.808642 | 2.801707e-50 | -8.615850e-47 |
| Msa0702830 | Msa0864300 | 0.820778 | 5.730207e-53 | -8.615850e-47 |
| Msa0718550 | Msa0864300 | 0.805550 | 1.264648e-49 | -8.615850e-47 |
| Msa0730430 | Msa0864300 | 0.808315 | 3.290122e-50 | -8.615850e-47 |
| Msa0740510 | Msa0864300 | 0.811398 | 7.143722e-51 | -8.615850e-47 |
| Msa0744000 | Msa0864300 | 0.994286 | 5.016806e-206 | -8.615850e-47 |
| Msa0744030 | Msa0864300 | 0.822259 | 2.606682e-53 | -8.615850e-47 |
| Msa0744040 | Msa0864300 | 0.809353 | 1.973056e-50 | -8.615850e-47 |
| Msa0756290 | Msa0864300 | 0.803865 | 2.842938e-49 | -8.615850e-47 |
| Msa0767300 | Msa0864300 | 0.835793 | 1.364216e-56 | -8.615850e-47 |
| Msa0787930 | Msa0864300 | 0.866190 | 3.416685e-65 | -8.615850e-47 |
| Msa0820770 | Msa0864300 | 0.811746 | 5.999195e-51 | -8.615850e-47 |
| Msa0824960 | Msa0864300 | 0.894265 | 2.901754e-75 | -8.615850e-47 |
| Msa0126370 | Msa0864300 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
| Msa0159930 | Msa0864300 | 0.855748 | 5.121569e-62 | -8.615850e-47 |
| Msa0171290 | Msa0864300 | 0.848393 | 6.307875e-60 | -8.615850e-47 |
| Msa0183050 | Msa0864300 | 0.813092 | 3.049581e-51 | -8.615850e-47 |
| Msa0189320 | Msa0864300 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
| Msa0205850 | Msa0864300 | 0.813427 | 2.574315e-51 | -8.615850e-47 |
| Msa0216240 | Msa0864300 | 0.800374 | 1.485392e-48 | -8.615850e-47 |
| Msa0220580 | Msa0864300 | 0.808110 | 3.637318e-50 | -8.615850e-47 |
| Msa0223690 | Msa0864300 | 0.800084 | 1.701260e-48 | -8.615850e-47 |
| Msa0225740 | Msa0864300 | 0.813935 | 1.989947e-51 | -8.615850e-47 |
| Msa0231650 | Msa0864300 | 0.801694 | 7.977169e-49 | -8.615850e-47 |
| Msa0366240 | Msa0864300 | 0.815207 | 1.040378e-51 | -8.615850e-47 |
| Msa0369850 | Msa0864300 | 0.822594 | 2.178882e-53 | -8.615850e-47 |
| Msa0370380 | Msa0864300 | 0.823055 | 1.701706e-53 | -8.615850e-47 |
| Msa0376350 | Msa0864300 | 0.824593 | 7.421516e-54 | -8.615850e-47 |
| Msa0410650 | Msa0864300 | 0.837257 | 5.784058e-57 | -8.615850e-47 |
| Msa0411160 | Msa0864300 | 0.841900 | 3.588385e-58 | -8.615850e-47 |
| Msa0411190 | Msa0864300 | 0.860555 | 1.903085e-63 | -8.615850e-47 |
| Msa0417270 | Msa0864300 | 0.818749 | 1.666240e-52 | -8.615850e-47 |
| Msa0417880 | Msa0864300 | 0.857727 | 1.340537e-62 | -8.615850e-47 |
| Msa0424790 | Msa0864300 | 0.824947 | 6.124266e-54 | -8.615850e-47 |
| Msa0440750 | Msa0864300 | 0.810537 | 1.097041e-50 | -8.615850e-47 |
| Msa0462390 | Msa0864300 | 0.808105 | 3.646314e-50 | -8.615850e-47 |
| Msa0462430 | Msa0864300 | 0.808248 | 3.400442e-50 | -8.615850e-47 |
| Msa0464380 | Msa0864300 | 0.860543 | 1.919881e-63 | -8.615850e-47 |
| Msa0468150 | Msa0864300 | 0.807365 | 5.238539e-50 | -8.615850e-47 |
| Msa0470690 | Msa0864300 | 0.842170 | 3.045290e-58 | -8.615850e-47 |
| Msa0479170 | Msa0864300 | 0.824846 | 6.468862e-54 | -8.615850e-47 |
| Msa0239480 | Msa0864300 | 0.801187 | 1.013413e-48 | -8.615850e-47 |
| Msa0240110 | Msa0864300 | 0.859008 | 5.567638e-63 | -8.615850e-47 |
| Msa0240150 | Msa0864300 | 0.857057 | 2.115514e-62 | -8.615850e-47 |
| Msa0243100 | Msa0864300 | 0.809768 | 1.606790e-50 | -8.615850e-47 |
| Msa0244860 | Msa0864300 | 0.813844 | 2.083177e-51 | -8.615850e-47 |
| Msa0248970 | Msa0864300 | 0.812583 | 3.940725e-51 | -8.615850e-47 |
| Msa0272770 | Msa0864300 | 0.826709 | 2.337918e-54 | -8.615850e-47 |
| Msa0282790 | Msa0864300 | 0.810357 | 1.199841e-50 | -8.615850e-47 |
| Msa0283520 | Msa0864300 | 0.807098 | 5.966207e-50 | -8.615850e-47 |
| Msa0287650 | Msa0864300 | 0.815532 | 8.809655e-52 | -8.615850e-47 |
| Msa0297740 | Msa0864300 | 0.816231 | 6.151002e-52 | -8.615850e-47 |
| Msa0313020 | Msa0864300 | 0.815326 | 9.791148e-52 | -8.615850e-47 |
| Msa0317730 | Msa0864300 | 0.845529 | 3.837344e-59 | -8.615850e-47 |
| Msa0332000 | Msa0864300 | 0.803924 | 2.763612e-49 | -8.615850e-47 |
| Msa0334490 | Msa0864300 | 0.812634 | 3.840482e-51 | -8.615850e-47 |
| Msa0340090 | Msa0864300 | 0.862610 | 4.487504e-64 | -8.615850e-47 |
| Msa0345970 | Msa0864300 | 0.801768 | 7.705602e-49 | -8.615850e-47 |
| Msa0507680 | Msa0864300 | 0.850423 | 1.714465e-60 | -8.615850e-47 |
| Msa0509610 | Msa0864300 | 0.829492 | 4.993818e-55 | -8.615850e-47 |
| Msa0516170 | Msa0864300 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa0546680 | Msa0864300 | 0.844160 | 8.977456e-59 | -8.615850e-47 |
| Msa0566310 | Msa0864300 | 0.864610 | 1.074608e-64 | -8.615850e-47 |
| Msa0569200 | Msa0864300 | 0.807308 | 5.387077e-50 | -8.615850e-47 |
| Msa0602460 | Msa0864300 | 0.817312 | 3.520855e-52 | -8.615850e-47 |
| Msa0856920 | Msa0864300 | 0.809723 | 1.643790e-50 | -8.615850e-47 |
| Msa0861090 | Msa0864300 | 0.811442 | 6.987980e-51 | -8.615850e-47 |
| Msa0863930 | Msa0864300 | 0.806907 | 6.548289e-50 | -8.615850e-47 |
| Msa0864300 | Msa0880950 | 0.827947 | 1.180666e-54 | -8.615850e-47 |
| Msa0864300 | Msa0888580 | 0.824617 | 7.325829e-54 | -8.615850e-47 |
| Msa0864300 | Msa0906690 | 0.800978 | 1.118235e-48 | -8.615850e-47 |
| Msa0864300 | Msa0933230 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa0864300 | Msa0966400 | 0.819406 | 1.181011e-52 | -8.615850e-47 |
| Msa0864300 | Msa0979730 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
| Msa0864300 | Msa1004840 | 0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0864300 | Msa1017630 | 0.814044 | 1.882477e-51 | -8.615850e-47 |
| Msa0864300 | Msa1020670 | 0.816856 | 4.457817e-52 | -8.615850e-47 |
| Msa0864300 | Msa1035960 | 0.839875 | 1.219325e-57 | -8.615850e-47 |
| Msa0864300 | Msa1047870 | 0.807178 | 5.737992e-50 | -8.615850e-47 |
| Msa0864300 | Msa1085200 | 0.836507 | 8.984783e-57 | -8.615850e-47 |
| Msa0864300 | Msa1127890 | 0.803485 | 3.408591e-49 | -8.615850e-47 |
| Msa0864300 | Msa1140210 | 0.828716 | 7.703068e-55 | -8.615850e-47 |
| Msa0864300 | Msa1170410 | 0.817832 | 2.687325e-52 | -8.615850e-47 |
| Msa0864300 | Msa1199570 | 0.808356 | 3.224363e-50 | -8.615850e-47 |
| Msa0864300 | Msa1200020 | 0.843457 | 1.384539e-58 | -8.615850e-47 |
| Msa0864300 | Msa1209460 | 0.814780 | 1.294461e-51 | -8.615850e-47 |
| Msa0864300 | Msa1279380 | 0.823934 | 1.059943e-53 | -8.615850e-47 |
| Msa0864300 | Msa1292830 | 0.808253 | 3.391959e-50 | -8.615850e-47 |
| Msa0864300 | Msa1295910 | 0.842200 | 2.989698e-58 | -8.615850e-47 |
| Msa0864300 | Msa1328710 | 0.824721 | 6.921927e-54 | -8.615850e-47 |
| Msa0864300 | Msa1335540 | 0.815350 | 9.671924e-52 | -8.615850e-47 |
| Msa0864300 | Msa1356140 | 0.810602 | 1.062438e-50 | -8.615850e-47 |
| Msa0864300 | Msa1366600 | 0.821749 | 3.421175e-53 | -8.615850e-47 |
| Msa0864300 | Msa1374040 | 0.800741 | 1.249924e-48 | -8.615850e-47 |
| Msa0864300 | Msa1398340 | 0.863872 | 1.825864e-64 | -8.615850e-47 |
| Msa0864300 | Msa1409700 | 0.832914 | 7.201178e-56 | -8.615850e-47 |
| Msa0864300 | Msa1435890 | 0.996067 | 5.125036e-223 | -8.615850e-47 |
| Msa0864300 | Msa1436480 | 0.823433 | 1.388866e-53 | -8.615850e-47 |
| Msa0864300 | Msa1457440 | 0.807968 | 3.900098e-50 | -8.615850e-47 |
| Msa0864300 | Msa1457910 | 0.803255 | 3.804007e-49 | -8.615850e-47 |
| Msa0864300 | Msa1460020 | 0.849909 | 2.388428e-60 | -8.615850e-47 |
| Msa0864300 | Msa1464810 | 0.825548 | 4.415556e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864300 | MtrunA17_Chr5g0446481 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Msa0864300 | MtrunA17_Chr3g0102341 | 56.552 | 290 | 92 | 8 | 383 | 653 | 370 | 644 | 2.28e-80 | 278 |
| Msa0864300 | MtrunA17_Chr3g0102341 | 54.826 | 259 | 105 | 6 | 701 | 949 | 528 | 784 | 1.40e-48 | 186 |
| Msa0864300 | MtrunA17_Chr3g0132011 | 39.688 | 320 | 147 | 10 | 384 | 676 | 91 | 391 | 1.22e-50 | 187 |
| Msa0864300 | MtrunA17_Chr3g0132011 | 34.884 | 258 | 139 | 10 | 695 | 941 | 249 | 488 | 8.93e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864300 | AT5G55660.1 | 52.261 | 199 | 78 | 4 | 365 | 558 | 301 | 487 | 5.62e-53 | 199 |
| Msa0864300 | AT5G55660.1 | 41.361 | 191 | 105 | 3 | 763 | 948 | 554 | 742 | 4.40e-24 | 109 |
| Msa0864300 | AT4G26630.2 | 53.807 | 197 | 72 | 4 | 380 | 569 | 307 | 491 | 1.30e-49 | 189 |
| Msa0864300 | AT4G26630.2 | 44.792 | 192 | 93 | 4 | 763 | 949 | 551 | 734 | 5.21e-24 | 109 |
| Msa0864300 | AT4G26630.1 | 53.807 | 197 | 72 | 4 | 380 | 569 | 307 | 491 | 1.30e-49 | 189 |
| Msa0864300 | AT4G26630.1 | 44.792 | 192 | 93 | 4 | 763 | 949 | 551 | 734 | 5.21e-24 | 109 |
| Msa0864300 | AT5G63550.2 | 39.667 | 300 | 137 | 6 | 385 | 653 | 94 | 380 | 1.04e-47 | 179 |
| Msa0864300 | AT5G63550.1 | 40.000 | 300 | 135 | 7 | 385 | 653 | 94 | 379 | 1.83e-46 | 175 |
| Msa0864300 | AT3G48710.1 | 32.326 | 430 | 212 | 15 | 384 | 754 | 53 | 462 | 3.25e-36 | 144 |
| Msa0864300 | AT1G64253.3 | 52.381 | 63 | 30 | 0 | 884 | 946 | 122 | 184 | 4.68e-13 | 69.3 |
| Msa0864300 | AT1G64253.2 | 52.381 | 63 | 30 | 0 | 884 | 946 | 254 | 316 | 2.23e-12 | 69.7 |
| Msa0864300 | AT1G64253.1 | 52.381 | 63 | 30 | 0 | 884 | 946 | 330 | 392 | 4.34e-11 | 66.6 |
Find 206 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAACATCCATGGAATTTA+TGG | 0.079462 | 5_4:+64564424 | Msa0864300:three_prime_UTR |
| TGCGAAGCTAATAGACTTTC+TGG | 0.127423 | 5_4:+64561279 | Msa0864300:CDS |
| CTCTTCAATTTGAAATTCTT+TGG | 0.180004 | 5_4:-64559911 | None:intergenic |
| ATGCTCTCATCTTTGGCTTC+AGG | 0.206211 | 5_4:-64559646 | None:intergenic |
| AACTTGGCATTGGATATATT+TGG | 0.223795 | 5_4:+64558222 | Msa0864300:five_prime_UTR |
| ACTTGAGAAAGTATTGAAAA+AGG | 0.225143 | 5_4:+64559747 | Msa0864300:CDS |
| TGCAACGGATTCTTTCTTTC+TGG | 0.237255 | 5_4:-64562838 | None:intergenic |
| GTATTGATATTGTGTATTCT+AGG | 0.238553 | 5_4:+64558490 | Msa0864300:five_prime_UTR |
| GTATCTACCTGCTTTGTCTT+TGG | 0.259843 | 5_4:-64563054 | None:intergenic |
| GTCTTTACAGATGCCTTTCT+TGG | 0.280038 | 5_4:-64564213 | None:intergenic |
| TGTGACCTTCAATAAGCTTT+TGG | 0.284216 | 5_4:-64558523 | None:intergenic |
| TGCCCTCATCTTTGCTTTCA+AGG | 0.287502 | 5_4:-64559450 | None:intergenic |
| TAGCATGTTAATGTCAGTTT+TGG | 0.296740 | 5_4:-64558711 | None:intergenic |
| AGGATAAGAAAGTTAATATT+GGG | 0.305761 | 5_4:+64559284 | Msa0864300:CDS |
| TGATAAAGGGGAAGAATTAA+AGG | 0.309808 | 5_4:+64559261 | Msa0864300:CDS |
| GAGGATAAGAAAGTTAATAT+TGG | 0.311525 | 5_4:+64559283 | Msa0864300:CDS |
| TCATCCATGGCATCTAATTC+AGG | 0.319577 | 5_4:-64559418 | None:intergenic |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | 5_4:+64559211 | Msa0864300:CDS |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | 5_4:+64559247 | Msa0864300:CDS |
| GATAAGAAAGATGATGATAA+TGG | 0.331137 | 5_4:+64559322 | Msa0864300:CDS |
| GTGAGTCGACAATGGTTTCT+TGG | 0.348685 | 5_4:-64562922 | None:intergenic |
| TCTTTACAGATGCCTTTCTT+GGG | 0.349273 | 5_4:-64564212 | None:intergenic |
| TGCTCTCATCTTTGGCTTCA+GGG | 0.352203 | 5_4:-64559645 | None:intergenic |
| ATATTGTGAAATGGTGACTA+TGG | 0.358528 | 5_4:-64558370 | None:intergenic |
| TTAACATCCATGGAATTTAT+GGG | 0.367431 | 5_4:+64564425 | Msa0864300:three_prime_UTR |
| TGGCATTTAAATTATCTAGA+AGG | 0.368252 | 5_4:+64560211 | Msa0864300:CDS |
| CTTGTATTTGCATTCCCAAC+TGG | 0.374686 | 5_4:-64560774 | None:intergenic |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | 5_4:+64559212 | Msa0864300:CDS |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | 5_4:+64559248 | Msa0864300:CDS |
| GCATGAAACTGCATAATTAC+TGG | 0.376456 | 5_4:-64564496 | None:intergenic |
| TTTGTTCTTGATCTTTCTTT+CGG | 0.380948 | 5_4:-64563620 | None:intergenic |
| TTCTTCCTTGAAAAGACCTT+GGG | 0.390073 | 5_4:-64562978 | None:intergenic |
| ACAGAAAACAATAACAAAAC+CGG | 0.394251 | 5_4:+64558917 | Msa0864300:CDS |
| CGGTTGGTTGTAGGAGTTGT+TGG | 0.399867 | 5_4:-64559829 | None:intergenic |
| CGTACAGGACGGTTGGTTGT+AGG | 0.414924 | 5_4:-64559838 | None:intergenic |
| AGGATAAGAAAGTTGATGTT+AGG | 0.418299 | 5_4:+64559068 | Msa0864300:CDS |
| AGCGGGAAAGGAAAGGTTGA+TGG | 0.418499 | 5_4:+64559574 | Msa0864300:CDS |
| TAGTACAAAATATTGTGAAA+TGG | 0.419255 | 5_4:-64558379 | None:intergenic |
| GTAATGCCTGACCGAGGATT+AGG | 0.419284 | 5_4:+64564304 | Msa0864300:exon |
| AGGATAAGAAAGACGATGTA+GGG | 0.420916 | 5_4:+64559032 | Msa0864300:CDS |
| TCCTACAAAAGAGGATTGTA+TGG | 0.423332 | 5_4:-64560260 | None:intergenic |
| ATAGCAAAACAAGGCTCAAC+AGG | 0.431493 | 5_4:+64561497 | Msa0864300:CDS |
| TGACAAATCTGAAGATGAAA+AGG | 0.431708 | 5_4:+64561791 | Msa0864300:CDS |
| GATATTGTGTATTCTAGGAT+TGG | 0.432331 | 5_4:+64558495 | Msa0864300:five_prime_UTR |
| CTTCTTCCTTGAAAAGACCT+TGG | 0.434088 | 5_4:-64562979 | None:intergenic |
| CAGAGAGGATGATAAGGATA+AGG | 0.435697 | 5_4:+64559498 | Msa0864300:CDS |
| ATTTCAGTTGAGATAGCAAT+TGG | 0.436096 | 5_4:+64558247 | Msa0864300:five_prime_UTR |
| TGAGTCGACAATGGTTTCTT+GGG | 0.438135 | 5_4:-64562921 | None:intergenic |
| TGGGGAGGAAGAACTAGAAA+TGG | 0.438759 | 5_4:+64558865 | Msa0864300:CDS |
| TCTACCTGCTTTGTCTTTGG+AGG | 0.441817 | 5_4:-64563051 | None:intergenic |
| AACAATAACAAAACCGGGGA+TGG | 0.443425 | 5_4:+64558923 | Msa0864300:CDS |
| ATAAGAAAGATGATGATAAT+GGG | 0.443554 | 5_4:+64559323 | Msa0864300:CDS |
| AAACAAGGCTCAACAGGATC+TGG | 0.448149 | 5_4:+64561503 | Msa0864300:CDS |
| TTTGTCTTTGGAGGAAGACT+TGG | 0.451286 | 5_4:-64563042 | None:intergenic |
| CCTTTCCTCTCCTACAAAAG+AGG | 0.454663 | 5_4:-64560269 | None:intergenic |
| GAGGGGAAGAAAGCTGATGA+AGG | 0.456835 | 5_4:+64559139 | Msa0864300:CDS |
| AAGAGAACGAAGAGAACGAC+AGG | 0.458455 | 5_4:+64564281 | Msa0864300:CDS |
| GAGGATTAGGTGTGACTGCT+TGG | 0.464707 | 5_4:+64564317 | Msa0864300:three_prime_UTR |
| AAAACCACGCTCGGCACGAA+AGG | 0.466168 | 5_4:+64562893 | Msa0864300:CDS |
| ATCACTTGCAGAACAAGAAA+AGG | 0.466254 | 5_4:+64561327 | Msa0864300:CDS |
| AAACAAGGTTCATCAAGATC+TGG | 0.467180 | 5_4:+64561969 | Msa0864300:CDS |
| AAACAAAGTTCATCGAGATC+TGG | 0.467180 | 5_4:+64562445 | Msa0864300:CDS |
| GAGGATGAGAAAGTTGTTGA+AGG | 0.467739 | 5_4:+64558959 | Msa0864300:CDS |
| AGATGAGGAGGTGGGCGATA+AGG | 0.469853 | 5_4:+64559687 | Msa0864300:CDS |
| ATGAGAAGAAAGTGAGTGAA+AGG | 0.469883 | 5_4:+64562802 | Msa0864300:CDS |
| TCTTTCACTTTGCAGGGTCG+TGG | 0.471388 | 5_4:+64560003 | Msa0864300:intron |
| GGAGGTGGGCGATAAGGATA+AGG | 0.471989 | 5_4:+64559693 | Msa0864300:CDS |
| AGAAGACAGAGAGGATGATA+AGG | 0.474281 | 5_4:+64559492 | Msa0864300:CDS |
| TCCCCACTTTCAGATTTCTC+CGG | 0.474376 | 5_4:-64562762 | None:intergenic |
| GCGGGAAAGGAAAGGTTGAT+GGG | 0.476391 | 5_4:+64559575 | Msa0864300:CDS |
| ATTGATTTAGTGATAAGTGA+TGG | 0.480612 | 5_4:+64558164 | Msa0864300:five_prime_UTR |
| ACTCACTCTGCATCCGATCA+TGG | 0.484372 | 5_4:+64562939 | Msa0864300:CDS |
| TTGATTTAGTGATAAGTGAT+GGG | 0.486399 | 5_4:+64558165 | Msa0864300:five_prime_UTR |
| ACTGATTTCCTTTCACGTAC+AGG | 0.487334 | 5_4:-64559853 | None:intergenic |
| ATGTAACAAAGAGAAGTTGC+TGG | 0.487637 | 5_4:+64560728 | Msa0864300:CDS |
| ATCTGCTTGACGTACCAGTT+GGG | 0.489298 | 5_4:+64560760 | Msa0864300:CDS |
| AAAACTGACATTAACATGCT+AGG | 0.489488 | 5_4:+64558713 | Msa0864300:CDS |
| CAAAGATGAGAGCATTGAAA+AGG | 0.490075 | 5_4:+64559654 | Msa0864300:CDS |
| GAGGACAAGCATGCTGATGA+AGG | 0.491058 | 5_4:+64558995 | Msa0864300:CDS |
| AAACCACGCTCGGCACGAAA+GGG | 0.493787 | 5_4:+64562894 | Msa0864300:CDS |
| CTTGTAAATCTTAACATCCA+TGG | 0.494733 | 5_4:+64564415 | Msa0864300:three_prime_UTR |
| GAGGATAAGAAAGTCAATGA+AGG | 0.495054 | 5_4:+64559103 | Msa0864300:CDS |
| GAAATTGATAAGAAAGCTGA+TGG | 0.495376 | 5_4:+64558845 | Msa0864300:CDS |
| CAAAGATGAGGGCAGTGAAA+AGG | 0.496877 | 5_4:+64559459 | Msa0864300:CDS |
| GAAAAGTCGAGATGAGGAGG+TGG | 0.497804 | 5_4:+64559678 | Msa0864300:CDS |
| GAGGATAAGAAAGACGATGT+AGG | 0.498637 | 5_4:+64559031 | Msa0864300:CDS |
| CTTGTTCCCCATAAATTCCA+TGG | 0.498950 | 5_4:-64564432 | None:intergenic |
| CATCACTGTTTCAAACAGGT+TGG | 0.499557 | 5_4:-64558288 | None:intergenic |
| TAATACCAAAAGCTTATTGA+AGG | 0.503564 | 5_4:+64558518 | Msa0864300:five_prime_UTR |
| ATGTTATCTAAGCACTTCAC+TGG | 0.504941 | 5_4:-64558653 | None:intergenic |
| GTCACACCTAATCCTCGGTC+AGG | 0.506796 | 5_4:-64564310 | None:intergenic |
| CGTGGATCTCACCCCAAGAA+AGG | 0.508523 | 5_4:+64564200 | Msa0864300:CDS |
| AAACTGACATTAACATGCTA+GGG | 0.509499 | 5_4:+64558714 | Msa0864300:CDS |
| CAATAACAAAACCGGGGATG+GGG | 0.511346 | 5_4:+64558925 | Msa0864300:CDS |
| ACAATAACAAAACCGGGGAT+GGG | 0.512246 | 5_4:+64558924 | Msa0864300:CDS |
| AGGGGAAGAAAGCTGATGAA+GGG | 0.512575 | 5_4:+64559140 | Msa0864300:CDS |
| GAGGATAAGAAAGACGATGC+AGG | 0.513407 | 5_4:+64559175 | Msa0864300:CDS |
| TCCGTAGCAGAGGAGAGAAA+AGG | 0.513706 | 5_4:+64562639 | Msa0864300:CDS |
| GAAGCCTGAATTAGATGCCA+TGG | 0.514285 | 5_4:+64559414 | Msa0864300:CDS |
| AAAGAAGGACCCGGAACCTA+AGG | 0.514727 | 5_4:+64558760 | Msa0864300:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | 5_4:+64559213 | Msa0864300:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | 5_4:+64559249 | Msa0864300:CDS |
| GGAGAAAAGTCGAGATGAGG+AGG | 0.517122 | 5_4:+64559675 | Msa0864300:CDS |
| AAAGGGTGGGAGAGGAAATG+TGG | 0.517698 | 5_4:+64559765 | Msa0864300:CDS |
| GACTATTATTCAGCAAGAGC+TGG | 0.518089 | 5_4:+64564233 | Msa0864300:CDS |
| TATTGGGGATGAAATTAAAG+AGG | 0.520170 | 5_4:+64559300 | Msa0864300:CDS |
| GAAGGAACTGAAGAAGATAG+AGG | 0.526671 | 5_4:+64559618 | Msa0864300:CDS |
| CTTTACAGATGCCTTTCTTG+GGG | 0.527928 | 5_4:-64564211 | None:intergenic |
| GGGGAAGAAAGCTGATGAAG+GGG | 0.527985 | 5_4:+64559141 | Msa0864300:CDS |
| TAAAGGGGAAGAATTAAAAG+AGG | 0.528111 | 5_4:+64559228 | Msa0864300:CDS |
| TTGCGTAACTGATCATCACT+CGG | 0.528843 | 5_4:-64563655 | None:intergenic |
| TGAGTCTGAGGAAGAACAGA+AGG | 0.530398 | 5_4:+64562680 | Msa0864300:CDS |
| TGGGAGAGGAAATGTGGAGA+AGG | 0.533504 | 5_4:+64559771 | Msa0864300:CDS |
| CAAAGAATTTCAAATTGAAG+AGG | 0.534513 | 5_4:+64559912 | Msa0864300:CDS |
| TTTAGCTTTACTTTGTGCAA+CGG | 0.534541 | 5_4:-64562853 | None:intergenic |
| CAGAAAACAATAACAAAACC+GGG | 0.534823 | 5_4:+64558918 | Msa0864300:CDS |
| AGGATAAGAAAGTCAATGAA+GGG | 0.536311 | 5_4:+64559104 | Msa0864300:CDS |
| TGTTAGGCAAGAGGTAAAAG+AGG | 0.536428 | 5_4:+64559084 | Msa0864300:CDS |
| CAAATCCAAGGATGAAAAGC+CGG | 0.539070 | 5_4:+64562743 | Msa0864300:CDS |
| AGAAGACTCGAGTGAAAAGA+AGG | 0.540152 | 5_4:+64558745 | Msa0864300:CDS |
| AACAAAACCGGGGATGGGGA+AGG | 0.541916 | 5_4:+64558929 | Msa0864300:CDS |
| AAGGATACTCTCTTCATCCA+TGG | 0.543834 | 5_4:-64559431 | None:intergenic |
| TGAAGGAGAAGAACTAAAAG+AGG | 0.545142 | 5_4:+64559012 | Msa0864300:CDS |
| ATTTAAATTATCTAGAAGGA+AGG | 0.545571 | 5_4:+64560215 | Msa0864300:CDS |
| GTCAAAGATTTGAAAGAGGA+TGG | 0.546722 | 5_4:+64558809 | Msa0864300:CDS |
| CCTTTCACGTACAGGACGGT+TGG | 0.549359 | 5_4:-64559845 | None:intergenic |
| TGTAGGGGAAGAAAGAAAAG+AGG | 0.551335 | 5_4:+64559048 | Msa0864300:CDS |
| GAAAGTTGATGTTAGGCAAG+AGG | 0.551951 | 5_4:+64559075 | Msa0864300:CDS |
| TGCTGTCAAAGATTTGAAAG+AGG | 0.553144 | 5_4:+64558805 | Msa0864300:CDS |
| GATCTGCTTGACGTACCAGT+TGG | 0.553892 | 5_4:+64560759 | Msa0864300:CDS |
| TATTGTGAAATGGTGACTAT+GGG | 0.553990 | 5_4:-64558369 | None:intergenic |
| GGATAAGAAAGACGATGTAG+GGG | 0.555055 | 5_4:+64559033 | Msa0864300:CDS |
| AGAGGATGGTATAAAAGCAA+TGG | 0.556456 | 5_4:+64558823 | Msa0864300:CDS |
| AAAGAAAATGAAGGAACTGA+AGG | 0.559025 | 5_4:+64559798 | Msa0864300:CDS |
| AGGATGAGAAAGTTGTTGAA+GGG | 0.560754 | 5_4:+64558960 | Msa0864300:CDS |
| GTTCCCTTTCGTGCCGAGCG+TGG | 0.562593 | 5_4:-64562897 | None:intergenic |
| ATCATCAAGACGTTCTGCTA+AGG | 0.566618 | 5_4:+64561998 | Msa0864300:CDS |
| TCCATCACTATCACCATGAT+CGG | 0.568310 | 5_4:-64562952 | None:intergenic |
| ATGGATAAGCAAGCTGATGA+TGG | 0.569226 | 5_4:+64558884 | Msa0864300:CDS |
| CACGTCAAGACGTTCTGCTA+AGG | 0.570043 | 5_4:+64562474 | Msa0864300:CDS |
| AGCCGGAGAAATCTGAAAGT+GGG | 0.571709 | 5_4:+64562760 | Msa0864300:CDS |
| AGGATAAGAAAGACGATGCA+GGG | 0.573511 | 5_4:+64559176 | Msa0864300:CDS |
| GGATAAGAAAGTCAATGAAG+GGG | 0.576776 | 5_4:+64559105 | Msa0864300:CDS |
| GATAAGAAAGTCAATGAAGG+GGG | 0.580294 | 5_4:+64559106 | Msa0864300:CDS |
| CAGTTGGGAATGCAAATACA+AGG | 0.581246 | 5_4:+64560775 | Msa0864300:CDS |
| AAGCCGGAGAAATCTGAAAG+TGG | 0.581270 | 5_4:+64562759 | Msa0864300:CDS |
| AACGTCAAGACGATCTGCTA+AGG | 0.582795 | 5_4:+64561532 | Msa0864300:CDS |
| TGGGAATGCAAATACAAGGA+AGG | 0.584888 | 5_4:+64560779 | Msa0864300:CDS |
| AAAGGAGAAAAGTCGAGATG+AGG | 0.585952 | 5_4:+64559672 | Msa0864300:CDS |
| GGAAGACTTGGTGAGAGTTG+AGG | 0.586612 | 5_4:-64563030 | None:intergenic |
| CCAACCGTCCTGTACGTGAA+AGG | 0.587863 | 5_4:+64559845 | Msa0864300:CDS |
| AGTTAAAGCAAAACCACGCT+CGG | 0.590668 | 5_4:+64562884 | Msa0864300:CDS |
| GAAAGATGAAGAAAACAAAG+AGG | 0.591937 | 5_4:+64561749 | Msa0864300:CDS |
| CACTGTTCCTGACAAATCCA+AGG | 0.592153 | 5_4:+64562731 | Msa0864300:CDS |
| TGAAGGGAAAGAAATAAAAG+AGG | 0.595089 | 5_4:+64558976 | Msa0864300:CDS |
| CTCGAGTGAAAAGAAGGACC+CGG | 0.597637 | 5_4:+64558751 | Msa0864300:CDS |
| AAGGAAATCAGTTCAGCGGT+TGG | 0.598635 | 5_4:+64559864 | Msa0864300:CDS |
| ACCGAGTAGCTTCAAAATGT+CGG | 0.599252 | 5_4:-64563919 | None:intergenic |
| GAAAATGAAGGAACTGAAGG+AGG | 0.601330 | 5_4:+64559801 | Msa0864300:CDS |
| GTGAAGTGCTTAGATAACAT+TGG | 0.603102 | 5_4:+64558656 | Msa0864300:five_prime_UTR |
| TGAAGATTCTTCCGTAGCAG+AGG | 0.604934 | 5_4:+64562629 | Msa0864300:CDS |
| TGATAAGAAAGCTGATGGGG+AGG | 0.606760 | 5_4:+64558850 | Msa0864300:CDS |
| TCTTCCTCCAAAGACAAAGC+AGG | 0.608589 | 5_4:+64563047 | Msa0864300:CDS |
| TGCAGGGGTAGAATTAAAAG+AGG | 0.613557 | 5_4:+64559192 | Msa0864300:CDS |
| AAGCAGTCACACCTAATCCT+CGG | 0.613596 | 5_4:-64564315 | None:intergenic |
| GGATAAGAAAGTTAATATTG+GGG | 0.615197 | 5_4:+64559285 | Msa0864300:CDS |
| TATCCTTGAAAGCAAAGATG+AGG | 0.617284 | 5_4:+64559447 | Msa0864300:CDS |
| AAAAGTCGAGATGAGGAGGT+GGG | 0.619228 | 5_4:+64559679 | Msa0864300:CDS |
| TAACATCCATGGAATTTATG+GGG | 0.619414 | 5_4:+64564426 | Msa0864300:three_prime_UTR |
| AAGAAGGACCCGGAACCTAA+GGG | 0.623031 | 5_4:+64558761 | Msa0864300:CDS |
| GGATAAGAAAGACGATGCAG+GGG | 0.625327 | 5_4:+64559177 | Msa0864300:CDS |
| TGCGTAACTGATCATCACTC+GGG | 0.628020 | 5_4:-64563654 | None:intergenic |
| GCCGGAGAAATCTGAAAGTG+GGG | 0.631822 | 5_4:+64562761 | Msa0864300:CDS |
| AAATTGATAAGAAAGCTGAT+GGG | 0.632945 | 5_4:+64558846 | Msa0864300:CDS |
| TCCGATCATGGTGATAGTGA+TGG | 0.633583 | 5_4:+64562951 | Msa0864300:CDS |
| CGGGAAAGGAAAGGTTGATG+GGG | 0.636918 | 5_4:+64559576 | Msa0864300:CDS |
| TGATTTAGTGATAAGTGATG+GGG | 0.639144 | 5_4:+64558166 | Msa0864300:five_prime_UTR |
| GACTGCTTGGATATATACAT+AGG | 0.639381 | 5_4:+64564330 | Msa0864300:three_prime_UTR |
| TGACACGGAAGATGAGTCTG+AGG | 0.639914 | 5_4:+64562668 | Msa0864300:CDS |
| ATTTCCTTTCACGTACAGGA+CGG | 0.640045 | 5_4:-64559849 | None:intergenic |
| CTTAGCAGAACGTCTTGACG+TGG | 0.642847 | 5_4:-64562473 | None:intergenic |
| AGATAACATTGGCATGAGTG+AGG | 0.643975 | 5_4:+64558667 | Msa0864300:exon |
| ATCCTTGAAAGCAAAGATGA+GGG | 0.644303 | 5_4:+64559448 | Msa0864300:CDS |
| TACAAAAGAGGATTGTATGG+AGG | 0.648735 | 5_4:-64560257 | None:intergenic |
| GGATGGGGAAGGAATAAAAG+AGG | 0.653046 | 5_4:+64558940 | Msa0864300:CDS |
| TGATAGTGATGGAAGTCCCA+AGG | 0.653632 | 5_4:+64562962 | Msa0864300:CDS |
| TAAAGGGGAAGAATTAAAGG+AGG | 0.653663 | 5_4:+64559264 | Msa0864300:CDS |
| TTTATGGGGAACAAGCCAGT+AGG | 0.654503 | 5_4:+64564440 | Msa0864300:three_prime_UTR |
| CCTTTAGAAAATATACCCAA+TGG | 0.655466 | 5_4:+64560030 | Msa0864300:CDS |
| TTAGCAGATCGTCTTGACGT+TGG | 0.655765 | 5_4:-64561530 | None:intergenic |
| AATTGATAAGAAAGCTGATG+GGG | 0.657202 | 5_4:+64558847 | Msa0864300:CDS |
| GATGCAGAGTGAGTCGACAA+TGG | 0.657519 | 5_4:-64562930 | None:intergenic |
| AAACAGCGCATAGCAAAACA+AGG | 0.662113 | 5_4:+64561488 | Msa0864300:CDS |
| TGAAACAGTGATGAAAATTG+CGG | 0.662904 | 5_4:+64558298 | Msa0864300:five_prime_UTR |
| GATACACTTGTTGTGACTTG+AGG | 0.670370 | 5_4:-64561307 | None:intergenic |
| GAGAAAAGGATTTACTGACA+CGG | 0.671908 | 5_4:+64562653 | Msa0864300:CDS |
| AAGGACCCGGAACCTAAGGG+AGG | 0.685854 | 5_4:+64558764 | Msa0864300:CDS |
| TTCAGGTAAGCAATTCGACG+TGG | 0.687225 | 5_4:+64564182 | Msa0864300:intron |
| GTGAAAGGAAATCAGTTCAG+CGG | 0.696158 | 5_4:+64559860 | Msa0864300:CDS |
| TTTCACTCGAGTCTTCTAGG+TGG | 0.696693 | 5_4:-64558739 | None:intergenic |
| ATTGTGAAATGGTGACTATG+GGG | 0.697187 | 5_4:-64558368 | None:intergenic |
| TGAGAATGACAAATTCAGTG+AGG | 0.705125 | 5_4:+64559348 | Msa0864300:CDS |
| AGAGAACGAAGAGAACGACA+GGG | 0.709851 | 5_4:+64564282 | Msa0864300:CDS |
| TTGTGAAATGGTGACTATGG+GGG | 0.710251 | 5_4:-64558367 | None:intergenic |
| AGAAAACAATAACAAAACCG+GGG | 0.717065 | 5_4:+64558919 | Msa0864300:CDS |
| GACAGGGTAATGCCTGACCG+AGG | 0.722362 | 5_4:+64564298 | Msa0864300:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATAATATTATAAAA+AGG | + | chr5_4:64563328-64563347 | Msa0864300:intron | 0.0% |
| !! | TGATTAAGAAAAATATATTA+AGG | + | chr5_4:64560521-64560540 | Msa0864300:CDS | 10.0% |
| !! | ACATTTAATCATAAAATTAA+GGG | - | chr5_4:64563143-64563162 | None:intergenic | 10.0% |
| !! | AACATTTAATCATAAAATTA+AGG | - | chr5_4:64563144-64563163 | None:intergenic | 10.0% |
| !!! | ATTTTATGATTAAATGTTTT+TGG | + | chr5_4:64563146-64563165 | Msa0864300:intron | 10.0% |
| !!! | TTTTTTTTACAAGAAAAAAA+AGG | - | chr5_4:64563216-64563235 | None:intergenic | 10.0% |
| !!! | AAATAACATATTTTTAACAA+AGG | + | chr5_4:64563360-64563379 | Msa0864300:intron | 10.0% |
| !!! | AATAACATATTTTTAACAAA+GGG | + | chr5_4:64563361-64563380 | Msa0864300:intron | 10.0% |
| !! | TTAAAATTAAAATCAACATT+AGG | - | chr5_4:64563819-64563838 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACACTGAT+AGG | + | chr5_4:64558606-64558625 | Msa0864300:intron | 15.0% |
| !!! | ATATTTTAACAGATAACAAA+TGG | - | chr5_4:64560346-64560365 | None:intergenic | 15.0% |
| !!! | AAAAATATATTAAGGTTTTC+TGG | + | chr5_4:64560529-64560548 | Msa0864300:CDS | 15.0% |
| !! | ATTTATACTACTATTATACT+CGG | + | chr5_4:64561067-64561086 | Msa0864300:intron | 15.0% |
| !! | TGATTTATAACCAATAAATT+TGG | + | chr5_4:64561623-64561642 | Msa0864300:intron | 15.0% |
| !!! | TGCTTTAAAACTAATAAATT+TGG | + | chr5_4:64562105-64562124 | Msa0864300:intron | 15.0% |
| !!! | AATATTAAACCTCTAAAAAA+AGG | - | chr5_4:64563248-64563267 | None:intergenic | 15.0% |
| !! | TGAAATCTGTAATATAAAAA+GGG | - | chr5_4:64563427-64563446 | None:intergenic | 15.0% |
| !! | ATGAAATCTGTAATATAAAA+AGG | - | chr5_4:64563428-64563447 | None:intergenic | 15.0% |
| !! | AAAAAGGTAATAATAAAGAA+GGG | - | chr5_4:64563950-64563969 | None:intergenic | 15.0% |
| !! | TAGTACAAAATATTGTGAAA+TGG | - | chr5_4:64558382-64558401 | None:intergenic | 20.0% |
| !!! | TCACAATATTTTGTACTAAA+TGG | + | chr5_4:64558384-64558403 | Msa0864300:five_prime_UTR | 20.0% |
| !!! | TTGAAACAATCTTTCATTTT+AGG | + | chr5_4:64558453-64558472 | Msa0864300:five_prime_UTR | 20.0% |
| !! | AGGATAAGAAAGTTAATATT+GGG | + | chr5_4:64559284-64559303 | Msa0864300:CDS | 20.0% |
| !! | ATAAGAAAGATGATGATAAT+GGG | + | chr5_4:64559323-64559342 | Msa0864300:CDS | 20.0% |
| !! | TTCAATATAACACACAATTA+AGG | - | chr5_4:64559962-64559981 | None:intergenic | 20.0% |
| !! | AGAGAATATATAGATCATAA+TGG | - | chr5_4:64560087-64560106 | None:intergenic | 20.0% |
| !! | ATTTAAATTATCTAGAAGGA+AGG | + | chr5_4:64560215-64560234 | Msa0864300:CDS | 20.0% |
| !! | TGACTGAAATGAAAAAAATT+AGG | - | chr5_4:64560316-64560335 | None:intergenic | 20.0% |
| !! | AATTTCATTATTCAAGGTAA+GGG | - | chr5_4:64560432-64560451 | None:intergenic | 20.0% |
| !! | TAATTTCATTATTCAAGGTA+AGG | - | chr5_4:64560433-64560452 | None:intergenic | 20.0% |
| !! | ACCTTGAATAATGAAATTAA+CGG | + | chr5_4:64560434-64560453 | Msa0864300:intron | 20.0% |
| !!! | TTGAATTTTTGTAACATTAC+AGG | + | chr5_4:64560935-64560954 | Msa0864300:intron | 20.0% |
| !! | TATCTAATTAATGTGTATTC+CGG | - | chr5_4:64560961-64560980 | None:intergenic | 20.0% |
| !!! | AATCAATATGTTAAAAGCAT+CGG | - | chr5_4:64561024-64561043 | None:intergenic | 20.0% |
| !! | ATTTAGATATATACCATAAG+TGG | + | chr5_4:64561595-64561614 | Msa0864300:intron | 20.0% |
| !!! | AATTGTTTTTTTAGAGAAAG+TGG | + | chr5_4:64562077-64562096 | Msa0864300:intron | 20.0% |
| !! | AAATGTAACTAGATATATGA+TGG | + | chr5_4:64562529-64562548 | Msa0864300:intron | 20.0% |
| !! | AAGAAGAAAAATGAAAAACA+AGG | + | chr5_4:64562996-64563015 | Msa0864300:CDS | 20.0% |
| !! | AAAAAGGGAATAATCTATTT+GGG | - | chr5_4:64563412-64563431 | None:intergenic | 20.0% |
| !! | TAAAAAGGGAATAATCTATT+TGG | - | chr5_4:64563413-64563432 | None:intergenic | 20.0% |
| !! | AGATTTATAAACTACATAAG+AGG | - | chr5_4:64563569-64563588 | None:intergenic | 20.0% |
| !! | CAAAAAGGTAATAATAAAGA+AGG | - | chr5_4:64563951-64563970 | None:intergenic | 20.0% |
| !! | TCATTATTAAACTTAAACCA+AGG | - | chr5_4:64563975-64563994 | None:intergenic | 20.0% |
| !!! | GTTTCTTTATTTATCAAAGA+CGG | + | chr5_4:64564058-64564077 | Msa0864300:intron | 20.0% |
| ! | GAAAAAATGTTAGAACAACA+TGG | - | chr5_4:64558144-64558163 | None:intergenic | 25.0% |
| !! | ATTGATTTAGTGATAAGTGA+TGG | + | chr5_4:64558164-64558183 | Msa0864300:five_prime_UTR | 25.0% |
| ! | TTGATTTAGTGATAAGTGAT+GGG | + | chr5_4:64558165-64558184 | Msa0864300:five_prime_UTR | 25.0% |
| !! | GTATTGATATTGTGTATTCT+AGG | + | chr5_4:64558490-64558509 | Msa0864300:five_prime_UTR | 25.0% |
| ! | TAATACCAAAAGCTTATTGA+AGG | + | chr5_4:64558518-64558537 | Msa0864300:five_prime_UTR | 25.0% |
| ! | AAATTGATAAGAAAGCTGAT+GGG | + | chr5_4:64558846-64558865 | Msa0864300:CDS | 25.0% |
| ! | ACAGAAAACAATAACAAAAC+CGG | + | chr5_4:64558917-64558936 | Msa0864300:CDS | 25.0% |
| ! | GAGGATAAGAAAGTTAATAT+TGG | + | chr5_4:64559283-64559302 | Msa0864300:CDS | 25.0% |
| ! | GGATAAGAAAGTTAATATTG+GGG | + | chr5_4:64559285-64559304 | Msa0864300:CDS | 25.0% |
| ! | GATAAGAAAGATGATGATAA+TGG | + | chr5_4:64559322-64559341 | Msa0864300:CDS | 25.0% |
| ! | GAATGTGAAAAAGAAAATGA+AGG | + | chr5_4:64559600-64559619 | Msa0864300:CDS | 25.0% |
| !!! | ACTTGAGAAAGTATTGAAAA+AGG | + | chr5_4:64559747-64559766 | Msa0864300:CDS | 25.0% |
| !!! | CTTGAGAAAGTATTGAAAAA+GGG | + | chr5_4:64559748-64559767 | Msa0864300:CDS | 25.0% |
| !! | CTCTTCAATTTGAAATTCTT+TGG | - | chr5_4:64559914-64559933 | None:intergenic | 25.0% |
| ! | CAAAGAATTTCAAATTGAAG+AGG | + | chr5_4:64559912-64559931 | Msa0864300:CDS | 25.0% |
| ! | GAAAGAAGAATTCAAACAAA+TGG | - | chr5_4:64560065-64560084 | None:intergenic | 25.0% |
| ! | TGGCATTTAAATTATCTAGA+AGG | + | chr5_4:64560211-64560230 | Msa0864300:CDS | 25.0% |
| ! | TCCGTTAATTTCATTATTCA+AGG | - | chr5_4:64560438-64560457 | None:intergenic | 25.0% |
| !!! | TCATTTTGTTATATATGACC+TGG | - | chr5_4:64560596-64560615 | None:intergenic | 25.0% |
| ! | AGATGTTAAGTCAACAAAAA+AGG | - | chr5_4:64561197-64561216 | None:intergenic | 25.0% |
| ! | TATTAATCTTCTACATATGC+AGG | + | chr5_4:64561246-64561265 | Msa0864300:intron | 25.0% |
| ! | AGGAAAAAGTTGAAAAGAAA+GGG | - | chr5_4:64561365-64561384 | None:intergenic | 25.0% |
| ! | ATAAATCACTTTACCACTTA+TGG | - | chr5_4:64561611-64561630 | None:intergenic | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+TGG | - | chr5_4:64561636-64561655 | None:intergenic | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+TGG | + | chr5_4:64561640-64561659 | Msa0864300:intron | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | chr5_4:64561850-64561869 | None:intergenic | 25.0% |
| ! | CAGAATAAAATAACACACTA+GGG | - | chr5_4:64561851-64561870 | None:intergenic | 25.0% |
| ! | AAAAAACAATTTATCGCTTC+TGG | - | chr5_4:64562068-64562087 | None:intergenic | 25.0% |
| ! | TGAAAAATCTGAAGATGAAA+AGG | + | chr5_4:64562267-64562286 | Msa0864300:CDS | 25.0% |
| ! | GGAAAAGTTTGAAAAGAAAA+GGG | - | chr5_4:64562305-64562324 | None:intergenic | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | chr5_4:64561850-64561869 | None:intergenic | 25.0% |
| ! | GAGAATAAAATAACACACTA+GGG | - | chr5_4:64562327-64562346 | None:intergenic | 25.0% |
| ! | AGAGAATAAAATAACACACT+AGG | - | chr5_4:64562328-64562347 | None:intergenic | 25.0% |
| !! | TACTTTTATCAGTCGATTAA+AGG | + | chr5_4:64562400-64562419 | Msa0864300:intron | 25.0% |
| !!! | TGCTTTAAAACCGATAAATT+TGG | + | chr5_4:64562563-64562582 | Msa0864300:intron | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+CGG | - | chr5_4:64561636-64561655 | None:intergenic | 25.0% |
| !!! | AATTTGGCTTTCTAATCTTT+AGG | + | chr5_4:64561639-64561658 | Msa0864300:intron | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+GGG | + | chr5_4:64561640-64561659 | Msa0864300:intron | 25.0% |
| ! | ACTAGAAATATTTAGAAAGG+CGG | - | chr5_4:64563119-64563138 | None:intergenic | 25.0% |
| ! | GGTACTAGAAATATTTAGAA+AGG | - | chr5_4:64563122-64563141 | None:intergenic | 25.0% |
| ! | TGGCAAAGAAGATTAAAATA+AGG | + | chr5_4:64563166-64563185 | Msa0864300:intron | 25.0% |
| !!! | ATCATTGTTCCTTTTTTTAG+AGG | + | chr5_4:64563236-64563255 | Msa0864300:intron | 25.0% |
| ! | TAATATTGTTCCATTGTAAG+AGG | + | chr5_4:64563261-64563280 | Msa0864300:intron | 25.0% |
| ! | TTTGTTCTTGATCTTTCTTT+CGG | - | chr5_4:64563623-64563642 | None:intergenic | 25.0% |
| ! | TAAAATCAACATTAGGATGT+AGG | - | chr5_4:64563812-64563831 | None:intergenic | 25.0% |
| !! | TATTATTACCTTTTTGTCCT+TGG | + | chr5_4:64563955-64563974 | Msa0864300:intron | 25.0% |
| !! | ACAAATGAGTGTAACTTTTA+TGG | + | chr5_4:64564023-64564042 | Msa0864300:intron | 25.0% |
| !!! | TTTTGACTAGTTATGCATTT+TGG | + | chr5_4:64564362-64564381 | Msa0864300:three_prime_UTR | 25.0% |
| !!! | TTTGACTAGTTATGCATTTT+GGG | + | chr5_4:64564363-64564382 | Msa0864300:three_prime_UTR | 25.0% |
| ! | TTAACATCCATGGAATTTAT+GGG | + | chr5_4:64564425-64564444 | Msa0864300:three_prime_UTR | 25.0% |
| !! | AATATGTAAAGAAGCTTTTG+TGG | + | chr5_4:64564533-64564552 | Msa0864300:three_prime_UTR | 25.0% |
| TGATTTAGTGATAAGTGATG+GGG | + | chr5_4:64558166-64558185 | Msa0864300:five_prime_UTR | 30.0% | |
| !! | ATTGCAACTTGTTTTCAACT+TGG | + | chr5_4:64558206-64558225 | Msa0864300:five_prime_UTR | 30.0% |
| ! | AACTTGGCATTGGATATATT+TGG | + | chr5_4:64558222-64558241 | Msa0864300:five_prime_UTR | 30.0% |
| ATTTCAGTTGAGATAGCAAT+TGG | + | chr5_4:64558247-64558266 | Msa0864300:five_prime_UTR | 30.0% | |
| ! | TTTTCATCACTGTTTCAAAC+AGG | - | chr5_4:64558295-64558314 | None:intergenic | 30.0% |
| TGAAACAGTGATGAAAATTG+CGG | + | chr5_4:64558298-64558317 | Msa0864300:five_prime_UTR | 30.0% | |
| TATTGTGAAATGGTGACTAT+GGG | - | chr5_4:64558372-64558391 | None:intergenic | 30.0% | |
| ATATTGTGAAATGGTGACTA+TGG | - | chr5_4:64558373-64558392 | None:intergenic | 30.0% | |
| !! | GATATTGTGTATTCTAGGAT+TGG | + | chr5_4:64558495-64558514 | Msa0864300:five_prime_UTR | 30.0% |
| CAACATGCAAAAAAAGAAAG+AGG | - | chr5_4:64558558-64558577 | None:intergenic | 30.0% | |
| ! | TAGCATGTTAATGTCAGTTT+TGG | - | chr5_4:64558714-64558733 | None:intergenic | 30.0% |
| AAAACTGACATTAACATGCT+AGG | + | chr5_4:64558713-64558732 | Msa0864300:CDS | 30.0% | |
| AAACTGACATTAACATGCTA+GGG | + | chr5_4:64558714-64558733 | Msa0864300:CDS | 30.0% | |
| GAAATTGATAAGAAAGCTGA+TGG | + | chr5_4:64558845-64558864 | Msa0864300:CDS | 30.0% | |
| AATTGATAAGAAAGCTGATG+GGG | + | chr5_4:64558847-64558866 | Msa0864300:CDS | 30.0% | |
| CAGAAAACAATAACAAAACC+GGG | + | chr5_4:64558918-64558937 | Msa0864300:CDS | 30.0% | |
| AGAAAACAATAACAAAACCG+GGG | + | chr5_4:64558919-64558938 | Msa0864300:CDS | 30.0% | |
| TGAAGGGAAAGAAATAAAAG+AGG | + | chr5_4:64558976-64558995 | Msa0864300:CDS | 30.0% | |
| !! | AGGATAAGAAAGTTGATGTT+AGG | + | chr5_4:64559068-64559087 | Msa0864300:CDS | 30.0% |
| AGGATAAGAAAGTCAATGAA+GGG | + | chr5_4:64559104-64559123 | Msa0864300:CDS | 30.0% | |
| TGAAGGGGAAAAATTAAAAG+AGG | + | chr5_4:64559156-64559175 | Msa0864300:CDS | 30.0% | |
| TAAAGGGGAAGAATTAAAAG+AGG | + | chr5_4:64559228-64559247 | Msa0864300:CDS | 30.0% | |
| TGATAAAGGGGAAGAATTAA+AGG | + | chr5_4:64559225-64559244 | Msa0864300:CDS | 30.0% | |
| TATTGGGGATGAAATTAAAG+AGG | + | chr5_4:64559300-64559319 | Msa0864300:CDS | 30.0% | |
| GAGAAGAGATTGAAAAAAAG+CGG | + | chr5_4:64559556-64559575 | Msa0864300:CDS | 30.0% | |
| AGAAGAGATTGAAAAAAAGC+GGG | + | chr5_4:64559557-64559576 | Msa0864300:CDS | 30.0% | |
| !! | AGAAAGTATTGAAAAAGGGT+GGG | + | chr5_4:64559752-64559771 | Msa0864300:CDS | 30.0% |
| AAAGAAAATGAAGGAACTGA+AGG | + | chr5_4:64559609-64559628 | Msa0864300:CDS | 30.0% | |
| ! | TAGTTTTTCTTTCACTTTGC+AGG | + | chr5_4:64559996-64560015 | Msa0864300:intron | 30.0% |
| ! | AGTTTTTCTTTCACTTTGCA+GGG | + | chr5_4:64559997-64560016 | Msa0864300:intron | 30.0% |
| ! | CCATTGGGTATATTTTCTAA+AGG | - | chr5_4:64560033-64560052 | None:intergenic | 30.0% |
| ! | CCTTTAGAAAATATACCCAA+TGG | + | chr5_4:64560030-64560049 | Msa0864300:CDS | 30.0% |
| AAATGGAACACTATACCATT+GGG | - | chr5_4:64560048-64560067 | None:intergenic | 30.0% | |
| ! | AATTAGGTTGTTCATGAAGT+AGG | - | chr5_4:64560300-64560319 | None:intergenic | 30.0% |
| ATATCCTTAACTATAGAGGT+GGG | - | chr5_4:64560376-64560395 | None:intergenic | 30.0% | |
| AATATCCTTAACTATAGAGG+TGG | - | chr5_4:64560377-64560396 | None:intergenic | 30.0% | |
| ACCTCTATAGTTAAGGATAT+TGG | + | chr5_4:64560376-64560395 | Msa0864300:intron | 30.0% | |
| TCCAATATCCTTAACTATAG+AGG | - | chr5_4:64560380-64560399 | None:intergenic | 30.0% | |
| TTCATCCTTAGACTGTTAAA+AGG | + | chr5_4:64560403-64560422 | Msa0864300:intron | 30.0% | |
| ! | TGTTTTACTATGTAATTCGC+AGG | + | chr5_4:64560492-64560511 | Msa0864300:intron | 30.0% |
| AAACCAAATATTGTTACTGC+AGG | + | chr5_4:64560668-64560687 | Msa0864300:intron | 30.0% | |
| TTTCCTGCAGTAACAATATT+TGG | - | chr5_4:64560674-64560693 | None:intergenic | 30.0% | |
| AATATTGTTACTGCAGGAAA+AGG | + | chr5_4:64560674-64560693 | Msa0864300:intron | 30.0% | |
| ATACAACAAATGTGTCAACA+GGG | - | chr5_4:64560819-64560838 | None:intergenic | 30.0% | |
| ! | ATTTTTGTAACATTACAGGC+CGG | + | chr5_4:64560939-64560958 | Msa0864300:intron | 30.0% |
| AACGGCATAATAAATTGCTA+CGG | - | chr5_4:64560986-64561005 | None:intergenic | 30.0% | |
| CGGTAATTCATTATAGACAA+CGG | - | chr5_4:64561004-64561023 | None:intergenic | 30.0% | |
| GAGGAAAAAGTTGAAAAGAA+AGG | - | chr5_4:64561366-64561385 | None:intergenic | 30.0% | |
| ACAGAATAAAGTAACACACT+AGG | - | chr5_4:64561392-64561411 | None:intergenic | 30.0% | |
| CCTTTAGTTGACTGAAAATA+GGG | - | chr5_4:64561467-64561486 | None:intergenic | 30.0% | |
| TCCTTTAGTTGACTGAAAAT+AGG | - | chr5_4:64561468-64561487 | None:intergenic | 30.0% | |
| !! | TATGGTATATTTTTCAGCGT+CGG | + | chr5_4:64561658-64561677 | Msa0864300:intron | 30.0% |
| GAAAGATGAAGAAAACAAAG+AGG | + | chr5_4:64561749-64561768 | Msa0864300:CDS | 30.0% | |
| TGACAAATCTGAAGATGAAA+AGG | + | chr5_4:64561791-64561810 | Msa0864300:CDS | 30.0% | |
| GGAAAAGGTTGAAAAGAAAA+GGG | - | chr5_4:64561829-64561848 | None:intergenic | 30.0% | |
| GCAGAATAAAATAACACACT+AGG | - | chr5_4:64561852-64561871 | None:intergenic | 30.0% | |
| ! | CTCTGAAAAATGTACCATAA+AGG | - | chr5_4:64562139-64562158 | None:intergenic | 30.0% |
| !! | TATGGTACATTTTTCAGAGT+CGG | + | chr5_4:64562140-64562159 | Msa0864300:intron | 30.0% |
| GGGAAAAGTTTGAAAAGAAA+AGG | - | chr5_4:64562306-64562325 | None:intergenic | 30.0% | |
| !! | TAGGGTATATTTTTCAGAGT+CGG | + | chr5_4:64562598-64562617 | Msa0864300:intron | 30.0% |
| !! | TTTAGCTTTACTTTGTGCAA+CGG | - | chr5_4:64562856-64562875 | None:intergenic | 30.0% |
| TAAACAAAAAAACTGAGAGG+CGG | - | chr5_4:64563095-64563114 | None:intergenic | 30.0% | |
| GGATAAACAAAAAAACTGAG+AGG | - | chr5_4:64563098-64563117 | None:intergenic | 30.0% | |
| ATATGAACTACCTCTTACAA+TGG | - | chr5_4:64563274-64563293 | None:intergenic | 30.0% | |
| TACATAAGAGGAAGAAGTTA+AGG | - | chr5_4:64563557-64563576 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTTTCCAGAAGAAA+AGG | + | chr5_4:64563594-64563613 | Msa0864300:intron | 30.0% |
| ATTCCTTCATCAATAACTAG+TGG | + | chr5_4:64563748-64563767 | Msa0864300:intron | 30.0% | |
| ATTCCACTAGTTATTGATGA+AGG | - | chr5_4:64563754-64563773 | None:intergenic | 30.0% | |
| AACTTAAACCAAGGACAAAA+AGG | - | chr5_4:64563966-64563985 | None:intergenic | 30.0% | |
| AGTTACACTCATTTGTAATC+TGG | - | chr5_4:64564019-64564038 | None:intergenic | 30.0% | |
| !! | TTGACTAGTTATGCATTTTG+GGG | + | chr5_4:64564364-64564383 | Msa0864300:three_prime_UTR | 30.0% |
| CTTGTAAATCTTAACATCCA+TGG | + | chr5_4:64564415-64564434 | Msa0864300:three_prime_UTR | 30.0% | |
| CTTAACATCCATGGAATTTA+TGG | + | chr5_4:64564424-64564443 | Msa0864300:three_prime_UTR | 30.0% | |
| TAACATCCATGGAATTTATG+GGG | + | chr5_4:64564426-64564445 | Msa0864300:three_prime_UTR | 30.0% | |
| CACAAAAAAAATGAACCTAC+TGG | - | chr5_4:64564458-64564477 | None:intergenic | 30.0% | |
| !!! | CAGTAGGTTCATTTTTTTTG+TGG | + | chr5_4:64564456-64564475 | Msa0864300:three_prime_UTR | 30.0% |
| !!! | TAGGTTCATTTTTTTTGTGG+TGG | + | chr5_4:64564459-64564478 | Msa0864300:three_prime_UTR | 30.0% |
| !! | ACTTGTTTTCAACTTGGCAT+TGG | + | chr5_4:64558212-64558231 | Msa0864300:five_prime_UTR | 35.0% |
| ATTGTGAAATGGTGACTATG+GGG | - | chr5_4:64558371-64558390 | None:intergenic | 35.0% | |
| ! | TGTGACCTTCAATAAGCTTT+TGG | - | chr5_4:64558526-64558545 | None:intergenic | 35.0% |
| ATGTTATCTAAGCACTTCAC+TGG | - | chr5_4:64558656-64558675 | None:intergenic | 35.0% | |
| ! | GTGAAGTGCTTAGATAACAT+TGG | + | chr5_4:64558656-64558675 | Msa0864300:five_prime_UTR | 35.0% |
| !!! | GTTTTGGAAGCTGTATTAAC+TGG | - | chr5_4:64558698-64558717 | None:intergenic | 35.0% |
| ! | TCAAAGATTTTTCCTCCCTT+AGG | - | chr5_4:64558779-64558798 | None:intergenic | 35.0% |
| TAAGGGAGGAAAAATCTTTG+AGG | + | chr5_4:64558778-64558797 | Msa0864300:CDS | 35.0% | |
| TGCTGTCAAAGATTTGAAAG+AGG | + | chr5_4:64558805-64558824 | Msa0864300:CDS | 35.0% | |
| GTCAAAGATTTGAAAGAGGA+TGG | + | chr5_4:64558809-64558828 | Msa0864300:CDS | 35.0% | |
| AGAGGATGGTATAAAAGCAA+TGG | + | chr5_4:64558823-64558842 | Msa0864300:CDS | 35.0% | |
| AGGATGAGAAAGTTGTTGAA+GGG | + | chr5_4:64558960-64558979 | Msa0864300:CDS | 35.0% | |
| TGAAGGAGAAGAACTAAAAG+AGG | + | chr5_4:64559012-64559031 | Msa0864300:CDS | 35.0% | |
| AGGATAAGAAAGACGATGTA+GGG | + | chr5_4:64559032-64559051 | Msa0864300:CDS | 35.0% | |
| GAGGATAAGAAAGTCAATGA+AGG | + | chr5_4:64559103-64559122 | Msa0864300:CDS | 35.0% | |
| GGATAAGAAAGTCAATGAAG+GGG | + | chr5_4:64559105-64559124 | Msa0864300:CDS | 35.0% | |
| GATAAGAAAGTCAATGAAGG+GGG | + | chr5_4:64559106-64559125 | Msa0864300:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | chr5_4:64559212-64559231 | Msa0864300:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | chr5_4:64559212-64559231 | Msa0864300:CDS | 35.0% | |
| TAAAGGGGAAGAATTAAAGG+AGG | + | chr5_4:64559264-64559283 | Msa0864300:CDS | 35.0% | |
| TGAGAATGACAAATTCAGTG+AGG | + | chr5_4:64559348-64559367 | Msa0864300:CDS | 35.0% | |
| TATCCTTGAAAGCAAAGATG+AGG | + | chr5_4:64559447-64559466 | Msa0864300:CDS | 35.0% | |
| ATCCTTGAAAGCAAAGATGA+GGG | + | chr5_4:64559448-64559467 | Msa0864300:CDS | 35.0% | |
| GAAAAATCAAGAAGACAGAG+AGG | + | chr5_4:64559483-64559502 | Msa0864300:CDS | 35.0% | |
| AGATTGAAAAAAAGCGGGAA+AGG | + | chr5_4:64559562-64559581 | Msa0864300:CDS | 35.0% | |
| ! | CTTTTCAATGCTCTCATCTT+TGG | - | chr5_4:64559656-64559675 | None:intergenic | 35.0% |
| !! | CAAAGATGAGAGCATTGAAA+AGG | + | chr5_4:64559654-64559673 | Msa0864300:CDS | 35.0% |
| !! | GAGAAAGTATTGAAAAAGGG+TGG | + | chr5_4:64559751-64559770 | Msa0864300:CDS | 35.0% |
| GAAGGCGAAAAAGAAAATGA+AGG | + | chr5_4:64559789-64559808 | Msa0864300:CDS | 35.0% | |
| CAAATGGAACACTATACCAT+TGG | - | chr5_4:64560049-64560068 | None:intergenic | 35.0% | |
| AGAAGCAGAAACACGTATAT+AGG | - | chr5_4:64560146-64560165 | None:intergenic | 35.0% | |
| TACAAAAGAGGATTGTATGG+AGG | - | chr5_4:64560260-64560279 | None:intergenic | 35.0% | |
| ! | TCCATACAATCCTCTTTTGT+AGG | + | chr5_4:64560259-64560278 | Msa0864300:CDS | 35.0% |
| TCCTACAAAAGAGGATTGTA+TGG | - | chr5_4:64560263-64560282 | None:intergenic | 35.0% | |
| TATCCTTAACTATAGAGGTG+GGG | - | chr5_4:64560375-64560394 | None:intergenic | 35.0% | |
| ! | GGTAACCTTTTAACAGTCTA+AGG | - | chr5_4:64560411-64560430 | None:intergenic | 35.0% |
| !!! | TAAGGTTTTCTGGTTTTGTG+TGG | + | chr5_4:64560539-64560558 | Msa0864300:CDS | 35.0% |
| ! | TTTTGTGTGGCATGAAAATG+AGG | + | chr5_4:64560552-64560571 | Msa0864300:CDS | 35.0% |
| ! | TATGTTTGTAACTTGCAACC+AGG | + | chr5_4:64560575-64560594 | Msa0864300:intron | 35.0% |
| ATGTAACAAAGAGAAGTTGC+TGG | + | chr5_4:64560728-64560747 | Msa0864300:CDS | 35.0% | |
| CAAATACAAGGAAGGTTTGT+TGG | + | chr5_4:64560787-64560806 | Msa0864300:intron | 35.0% | |
| CATACAACAAATGTGTCAAC+AGG | - | chr5_4:64560820-64560839 | None:intergenic | 35.0% | |
| !! | CTGTTGACACATTTGTTGTA+TGG | + | chr5_4:64560818-64560837 | Msa0864300:intron | 35.0% |
| ACGACACGAGTATAATATTC+TGG | - | chr5_4:64561126-64561145 | None:intergenic | 35.0% | |
| !! | AGTCAACAAAAAAGGCATCA+AGG | - | chr5_4:64561189-64561208 | None:intergenic | 35.0% |
| ATCACTTGCAGAACAAGAAA+AGG | + | chr5_4:64561327-64561346 | Msa0864300:CDS | 35.0% | |
| AAAGTAACACACTAGGTTAG+AGG | - | chr5_4:64561385-64561404 | None:intergenic | 35.0% | |
| ! | CCCTATTTTCAGTCAACTAA+AGG | + | chr5_4:64561464-64561483 | Msa0864300:intron | 35.0% |
| GGGAAAAGGTTGAAAAGAAA+AGG | - | chr5_4:64561830-64561849 | None:intergenic | 35.0% | |
| AAATAACACACTAGGGGAAA+AGG | - | chr5_4:64561844-64561863 | None:intergenic | 35.0% | |
| ! | TCCTTTTATCAGTCGAGTAA+AGG | + | chr5_4:64561924-64561943 | Msa0864300:intron | 35.0% |
| TCCTTTACTCGACTGATAAA+AGG | - | chr5_4:64561928-64561947 | None:intergenic | 35.0% | |
| AAACAAGGTTCATCAAGATC+TGG | + | chr5_4:64561969-64561988 | Msa0864300:CDS | 35.0% | |
| AAACAAAGTTCATCGAGATC+TGG | + | chr5_4:64562445-64562464 | Msa0864300:CDS | 35.0% | |
| GAGAAAAGGATTTACTGACA+CGG | + | chr5_4:64562653-64562672 | Msa0864300:CDS | 35.0% | |
| ! | TTTTCATCCTTGGATTTGTC+AGG | - | chr5_4:64562741-64562760 | None:intergenic | 35.0% |
| ATGAGAAGAAAGTGAGTGAA+AGG | + | chr5_4:64562802-64562821 | Msa0864300:CDS | 35.0% | |
| TTCTTCCTTGAAAAGACCTT+GGG | - | chr5_4:64562981-64563000 | None:intergenic | 35.0% | |
| GAGGAAGAAGTTAAGGTAAT+GGG | - | chr5_4:64563550-64563569 | None:intergenic | 35.0% | |
| AGAGGAAGAAGTTAAGGTAA+TGG | - | chr5_4:64563551-64563570 | None:intergenic | 35.0% | |
| ATAAATTACGCCTCTAGTGA+AGG | + | chr5_4:64563838-64563857 | Msa0864300:intron | 35.0% | |
| !! | CGGAGAATTTTGAAGATAGA+AGG | + | chr5_4:64564078-64564097 | Msa0864300:intron | 35.0% |
| AAAATTGCTGACCATTGTTC+AGG | + | chr5_4:64564165-64564184 | Msa0864300:intron | 35.0% | |
| TCTTTACAGATGCCTTTCTT+GGG | - | chr5_4:64564215-64564234 | None:intergenic | 35.0% | |
| GACTGCTTGGATATATACAT+AGG | + | chr5_4:64564330-64564349 | Msa0864300:three_prime_UTR | 35.0% | |
| GCATGAAACTGCATAATTAC+TGG | - | chr5_4:64564499-64564518 | None:intergenic | 35.0% | |
| ! | ATGTAAAGAAGCTTTTGTGG+AGG | + | chr5_4:64564536-64564555 | Msa0864300:three_prime_UTR | 35.0% |
| CATCACTGTTTCAAACAGGT+TGG | - | chr5_4:64558291-64558310 | None:intergenic | 40.0% | |
| TTGTGAAATGGTGACTATGG+GGG | - | chr5_4:64558370-64558389 | None:intergenic | 40.0% | |
| AGATAACATTGGCATGAGTG+AGG | + | chr5_4:64558667-64558686 | Msa0864300:exon | 40.0% | |
| ! | TCTTTTCACTCGAGTCTTCT+AGG | - | chr5_4:64558745-64558764 | None:intergenic | 40.0% |
| AGAAGACTCGAGTGAAAAGA+AGG | + | chr5_4:64558745-64558764 | Msa0864300:CDS | 40.0% | |
| ! | ATTTTTCCTCCCTTAGGTTC+CGG | - | chr5_4:64558773-64558792 | None:intergenic | 40.0% |
| ATGGATAAGCAAGCTGATGA+TGG | + | chr5_4:64558884-64558903 | Msa0864300:CDS | 40.0% | |
| AACAATAACAAAACCGGGGA+TGG | + | chr5_4:64558923-64558942 | Msa0864300:CDS | 40.0% | |
| ACAATAACAAAACCGGGGAT+GGG | + | chr5_4:64558924-64558943 | Msa0864300:CDS | 40.0% | |
| GAGGATGAGAAAGTTGTTGA+AGG | + | chr5_4:64558959-64558978 | Msa0864300:CDS | 40.0% | |
| GAGGATAAGAAAGACGATGT+AGG | + | chr5_4:64559031-64559050 | Msa0864300:CDS | 40.0% | |
| GGATAAGAAAGACGATGTAG+GGG | + | chr5_4:64559033-64559052 | Msa0864300:CDS | 40.0% | |
| TGTAGGGGAAGAAAGAAAAG+AGG | + | chr5_4:64559048-64559067 | Msa0864300:CDS | 40.0% | |
| !! | GAAAGTTGATGTTAGGCAAG+AGG | + | chr5_4:64559075-64559094 | Msa0864300:CDS | 40.0% |
| TGTTAGGCAAGAGGTAAAAG+AGG | + | chr5_4:64559084-64559103 | Msa0864300:CDS | 40.0% | |
| AGGATAAGAAAGACGATGCA+GGG | + | chr5_4:64559176-64559195 | Msa0864300:CDS | 40.0% | |
| TGCAGGGGTAGAATTAAAAG+AGG | + | chr5_4:64559192-64559211 | Msa0864300:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | chr5_4:64559211-64559230 | Msa0864300:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | chr5_4:64559213-64559232 | Msa0864300:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | chr5_4:64559211-64559230 | Msa0864300:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | chr5_4:64559213-64559232 | Msa0864300:CDS | 40.0% | |
| TCATCCATGGCATCTAATTC+AGG | - | chr5_4:64559421-64559440 | None:intergenic | 40.0% | |
| AAGGATACTCTCTTCATCCA+TGG | - | chr5_4:64559434-64559453 | None:intergenic | 40.0% | |
| AGAAGACAGAGAGGATGATA+AGG | + | chr5_4:64559492-64559511 | Msa0864300:CDS | 40.0% | |
| CAGAGAGGATGATAAGGATA+AGG | + | chr5_4:64559498-64559517 | Msa0864300:CDS | 40.0% | |
| GAAAAAAAGCGGGAAAGGAA+AGG | + | chr5_4:64559567-64559586 | Msa0864300:CDS | 40.0% | |
| GAAGGAACTGAAGAAGATAG+AGG | + | chr5_4:64559618-64559637 | Msa0864300:CDS | 40.0% | |
| AAAGGAGAAAAGTCGAGATG+AGG | + | chr5_4:64559672-64559691 | Msa0864300:CDS | 40.0% | |
| GAAAATGAAGGAACTGAAGG+AGG | + | chr5_4:64559801-64559820 | Msa0864300:CDS | 40.0% | |
| ATTTCCTTTCACGTACAGGA+CGG | - | chr5_4:64559852-64559871 | None:intergenic | 40.0% | |
| ! | ACTGATTTCCTTTCACGTAC+AGG | - | chr5_4:64559856-64559875 | None:intergenic | 40.0% |
| GTGAAAGGAAATCAGTTCAG+CGG | + | chr5_4:64559860-64559879 | Msa0864300:CDS | 40.0% | |
| ! | TCTTGCGTTTTATGCTTCAG+TGG | + | chr5_4:64560191-64560210 | Msa0864300:CDS | 40.0% |
| ! | ACAATCCTCTTTTGTAGGAG+AGG | + | chr5_4:64560264-64560283 | Msa0864300:CDS | 40.0% |
| CTTGTATTTGCATTCCCAAC+TGG | - | chr5_4:64560777-64560796 | None:intergenic | 40.0% | |
| CAGTTGGGAATGCAAATACA+AGG | + | chr5_4:64560775-64560794 | Msa0864300:CDS | 40.0% | |
| TGGGAATGCAAATACAAGGA+AGG | + | chr5_4:64560779-64560798 | Msa0864300:CDS | 40.0% | |
| !! | AAAAGGCATCAAGGACTGAT+TGG | - | chr5_4:64561180-64561199 | None:intergenic | 40.0% |
| TGCGAAGCTAATAGACTTTC+TGG | + | chr5_4:64561279-64561298 | Msa0864300:CDS | 40.0% | |
| !! | GATACACTTGTTGTGACTTG+AGG | - | chr5_4:64561310-64561329 | None:intergenic | 40.0% |
| AAACAGCGCATAGCAAAACA+AGG | + | chr5_4:64561488-64561507 | Msa0864300:CDS | 40.0% | |
| ATAGCAAAACAAGGCTCAAC+AGG | + | chr5_4:64561497-64561516 | Msa0864300:CDS | 40.0% | |
| TCTGCTAAGGTGAGATTTCA+TGG | + | chr5_4:64561545-64561564 | Msa0864300:intron | 40.0% | |
| TAACTTGAGACGAGTGTTTC+TGG | + | chr5_4:64561874-64561893 | Msa0864300:intron | 40.0% | |
| ATCATCAAGACGTTCTGCTA+AGG | + | chr5_4:64561998-64562017 | Msa0864300:CDS | 40.0% | |
| CAAATCCAAGGATGAAAAGC+CGG | + | chr5_4:64562743-64562762 | Msa0864300:CDS | 40.0% | |
| ! | TGCAACGGATTCTTTCTTTC+TGG | - | chr5_4:64562841-64562860 | None:intergenic | 40.0% |
| AGTTAAAGCAAAACCACGCT+CGG | + | chr5_4:64562884-64562903 | Msa0864300:CDS | 40.0% | |
| TGAGTCGACAATGGTTTCTT+GGG | - | chr5_4:64562924-64562943 | None:intergenic | 40.0% | |
| TCCATCACTATCACCATGAT+CGG | - | chr5_4:64562955-64562974 | None:intergenic | 40.0% | |
| CTTCTTCCTTGAAAAGACCT+TGG | - | chr5_4:64562982-64563001 | None:intergenic | 40.0% | |
| ! | TTTGTCTTTGGAGGAAGACT+TGG | - | chr5_4:64563045-64563064 | None:intergenic | 40.0% |
| GTATCTACCTGCTTTGTCTT+TGG | - | chr5_4:64563057-64563076 | None:intergenic | 40.0% | |
| AGGGAATAATCTATTTGGGC+TGG | - | chr5_4:64563408-64563427 | None:intergenic | 40.0% | |
| ACTAATCACTAGAACGCGAA+AGG | - | chr5_4:64563474-64563493 | None:intergenic | 40.0% | |
| ! | CTTTCGGTAACCTTTTCTTC+TGG | - | chr5_4:64563607-64563626 | None:intergenic | 40.0% |
| TTGCGTAACTGATCATCACT+CGG | - | chr5_4:64563658-64563677 | None:intergenic | 40.0% | |
| CAACAGAAAACCTTCACTAG+AGG | - | chr5_4:64563851-64563870 | None:intergenic | 40.0% | |
| ACCGAGTAGCTTCAAAATGT+CGG | - | chr5_4:64563922-64563941 | None:intergenic | 40.0% | |
| CGAATTGCTTACCTGAACAA+TGG | - | chr5_4:64564179-64564198 | None:intergenic | 40.0% | |
| CTTTACAGATGCCTTTCTTG+GGG | - | chr5_4:64564214-64564233 | None:intergenic | 40.0% | |
| GTCTTTACAGATGCCTTTCT+TGG | - | chr5_4:64564216-64564235 | None:intergenic | 40.0% | |
| GACTATTATTCAGCAAGAGC+TGG | + | chr5_4:64564233-64564252 | Msa0864300:CDS | 40.0% | |
| CTTGTTCCCCATAAATTCCA+TGG | - | chr5_4:64564435-64564454 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGTGGAGGATTT+TGG | + | chr5_4:64564543-64564562 | Msa0864300:three_prime_UTR | 40.0% |
| TTTCACTCGAGTCTTCTAGG+TGG | - | chr5_4:64558742-64558761 | None:intergenic | 45.0% | |
| ! | TTTTTCCTCCCTTAGGTTCC+GGG | - | chr5_4:64558772-64558791 | None:intergenic | 45.0% |
| TGATAAGAAAGCTGATGGGG+AGG | + | chr5_4:64558850-64558869 | Msa0864300:CDS | 45.0% | |
| TGGGGAGGAAGAACTAGAAA+TGG | + | chr5_4:64558865-64558884 | Msa0864300:CDS | 45.0% | |
| CAATAACAAAACCGGGGATG+GGG | + | chr5_4:64558925-64558944 | Msa0864300:CDS | 45.0% | |
| ! | TTTTATTCCTTCCCCATCCC+CGG | - | chr5_4:64558939-64558958 | None:intergenic | 45.0% |
| GGATGGGGAAGGAATAAAAG+AGG | + | chr5_4:64558940-64558959 | Msa0864300:CDS | 45.0% | |
| TGAAGGGGGAGAGATAAAAG+AGG | + | chr5_4:64559120-64559139 | Msa0864300:CDS | 45.0% | |
| GAAGGGGGAGAGATAAAAGA+GGG | + | chr5_4:64559121-64559140 | Msa0864300:CDS | 45.0% | |
| AAGGGGGAGAGATAAAAGAG+GGG | + | chr5_4:64559122-64559141 | Msa0864300:CDS | 45.0% | |
| AGGGGAAGAAAGCTGATGAA+GGG | + | chr5_4:64559140-64559159 | Msa0864300:CDS | 45.0% | |
| GAGGATAAGAAAGACGATGC+AGG | + | chr5_4:64559175-64559194 | Msa0864300:CDS | 45.0% | |
| GGATAAGAAAGACGATGCAG+GGG | + | chr5_4:64559177-64559196 | Msa0864300:CDS | 45.0% | |
| GAAGCCTGAATTAGATGCCA+TGG | + | chr5_4:64559414-64559433 | Msa0864300:CDS | 45.0% | |
| TGCCCTCATCTTTGCTTTCA+AGG | - | chr5_4:64559453-64559472 | None:intergenic | 45.0% | |
| CAAAGATGAGGGCAGTGAAA+AGG | + | chr5_4:64559459-64559478 | Msa0864300:CDS | 45.0% | |
| ! | TGCTCTCATCTTTGGCTTCA+GGG | - | chr5_4:64559648-64559667 | None:intergenic | 45.0% |
| ! | ATGCTCTCATCTTTGGCTTC+AGG | - | chr5_4:64559649-64559668 | None:intergenic | 45.0% |
| AAAAGTCGAGATGAGGAGGT+GGG | + | chr5_4:64559679-64559698 | Msa0864300:CDS | 45.0% | |
| GTATTGAAAAAGGGTGGGAG+AGG | + | chr5_4:64559757-64559776 | Msa0864300:CDS | 45.0% | |
| AAGGAAATCAGTTCAGCGGT+TGG | + | chr5_4:64559864-64559883 | Msa0864300:CDS | 45.0% | |
| CCTTTCCTCTCCTACAAAAG+AGG | - | chr5_4:64560272-64560291 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGTAGGAGAGGAA+AGG | + | chr5_4:64560269-64560288 | Msa0864300:CDS | 45.0% |
| TCACCCCACCTCTATAGTTA+AGG | + | chr5_4:64560369-64560388 | Msa0864300:intron | 45.0% | |
| ATCTGCTTGACGTACCAGTT+GGG | + | chr5_4:64560760-64560779 | Msa0864300:CDS | 45.0% | |
| !! | ACATTTGTTGTATGGCAGCC+TGG | + | chr5_4:64560826-64560845 | Msa0864300:intron | 45.0% |
| CGACTATTATCAGCATTGCC+AGG | - | chr5_4:64560847-64560866 | None:intergenic | 45.0% | |
| CGTATTCATGCTGTACGCTT+TGG | + | chr5_4:64560865-64560884 | Msa0864300:intron | 45.0% | |
| TGAGTACGATGCATCTGTCA+AGG | + | chr5_4:64561149-64561168 | Msa0864300:intron | 45.0% | |
| CTACTCAAGACGAGTGTATC+TGG | + | chr5_4:64561414-64561433 | Msa0864300:intron | 45.0% | |
| AAACAAGGCTCAACAGGATC+TGG | + | chr5_4:64561503-64561522 | Msa0864300:CDS | 45.0% | |
| TTAGCAGATCGTCTTGACGT+TGG | - | chr5_4:64561533-64561552 | None:intergenic | 45.0% | |
| AACGTCAAGACGATCTGCTA+AGG | + | chr5_4:64561532-64561551 | Msa0864300:CDS | 45.0% | |
| CGCAAGCGCATAGAAAAACA+AGG | + | chr5_4:64561954-64561973 | Msa0864300:CDS | 45.0% | |
| TTACTTGAGACGAGCGTTTC+TGG | + | chr5_4:64562350-64562369 | Msa0864300:intron | 45.0% | |
| TGAAGATTCTTCCGTAGCAG+AGG | + | chr5_4:64562629-64562648 | Msa0864300:CDS | 45.0% | |
| ! | TCCTTTTCTCTCCTCTGCTA+CGG | - | chr5_4:64562643-64562662 | None:intergenic | 45.0% |
| TGAGTCTGAGGAAGAACAGA+AGG | + | chr5_4:64562680-64562699 | Msa0864300:CDS | 45.0% | |
| CACTGTTCCTGACAAATCCA+AGG | + | chr5_4:64562731-64562750 | Msa0864300:CDS | 45.0% | |
| ! | TTTCTCCGGCTTTTCATCCT+TGG | - | chr5_4:64562751-64562770 | None:intergenic | 45.0% |
| AAGCCGGAGAAATCTGAAAG+TGG | + | chr5_4:64562759-64562778 | Msa0864300:CDS | 45.0% | |
| AGCCGGAGAAATCTGAAAGT+GGG | + | chr5_4:64562760-64562779 | Msa0864300:CDS | 45.0% | |
| TCCCCACTTTCAGATTTCTC+CGG | - | chr5_4:64562765-64562784 | None:intergenic | 45.0% | |
| GTGAGTCGACAATGGTTTCT+TGG | - | chr5_4:64562925-64562944 | None:intergenic | 45.0% | |
| ! | TCCGATCATGGTGATAGTGA+TGG | + | chr5_4:64562951-64562970 | Msa0864300:CDS | 45.0% |
| ! | TGATAGTGATGGAAGTCCCA+AGG | + | chr5_4:64562962-64562981 | Msa0864300:CDS | 45.0% |
| ! | GAAGTCCCAAGGTCTTTTCA+AGG | + | chr5_4:64562973-64562992 | Msa0864300:CDS | 45.0% |
| TCTTCCTCCAAAGACAAAGC+AGG | + | chr5_4:64563047-64563066 | Msa0864300:CDS | 45.0% | |
| TCTACCTGCTTTGTCTTTGG+AGG | - | chr5_4:64563054-64563073 | None:intergenic | 45.0% | |
| TGCGTAACTGATCATCACTC+GGG | - | chr5_4:64563657-64563676 | None:intergenic | 45.0% | |
| !! | ACATTTTCTCCCGCTTTTGC+AGG | + | chr5_4:64563887-64563906 | Msa0864300:intron | 45.0% |
| CAAATGTAGCCTGCAAAAGC+GGG | - | chr5_4:64563899-64563918 | None:intergenic | 45.0% | |
| GCAAATGTAGCCTGCAAAAG+CGG | - | chr5_4:64563900-64563919 | None:intergenic | 45.0% | |
| !!! | GCCGACATTTTGAAGCTACT+CGG | + | chr5_4:64563918-64563937 | Msa0864300:CDS | 45.0% |
| TTCAGGTAAGCAATTCGACG+TGG | + | chr5_4:64564182-64564201 | Msa0864300:intron | 45.0% | |
| AAGAGAACGAAGAGAACGAC+AGG | + | chr5_4:64564281-64564300 | Msa0864300:CDS | 45.0% | |
| AGAGAACGAAGAGAACGACA+GGG | + | chr5_4:64564282-64564301 | Msa0864300:CDS | 45.0% | |
| AAGCAGTCACACCTAATCCT+CGG | - | chr5_4:64564318-64564337 | None:intergenic | 45.0% | |
| TTTATGGGGAACAAGCCAGT+AGG | + | chr5_4:64564440-64564459 | Msa0864300:three_prime_UTR | 45.0% | |
| CTCGAGTGAAAAGAAGGACC+CGG | + | chr5_4:64558751-64558770 | Msa0864300:CDS | 50.0% | |
| AAAGAAGGACCCGGAACCTA+AGG | + | chr5_4:64558760-64558779 | Msa0864300:CDS | 50.0% | |
| AAGAAGGACCCGGAACCTAA+GGG | + | chr5_4:64558761-64558780 | Msa0864300:CDS | 50.0% | |
| GAGGACAAGCATGCTGATGA+AGG | + | chr5_4:64558995-64559014 | Msa0864300:CDS | 50.0% | |
| GAGGGGAAGAAAGCTGATGA+AGG | + | chr5_4:64559139-64559158 | Msa0864300:CDS | 50.0% | |
| GGGGAAGAAAGCTGATGAAG+GGG | + | chr5_4:64559141-64559160 | Msa0864300:CDS | 50.0% | |
| AGCGGGAAAGGAAAGGTTGA+TGG | + | chr5_4:64559574-64559593 | Msa0864300:CDS | 50.0% | |
| ! | GCGGGAAAGGAAAGGTTGAT+GGG | + | chr5_4:64559575-64559594 | Msa0864300:CDS | 50.0% |
| !! | CGGGAAAGGAAAGGTTGATG+GGG | + | chr5_4:64559576-64559595 | Msa0864300:CDS | 50.0% |
| GGAGAAAAGTCGAGATGAGG+AGG | + | chr5_4:64559675-64559694 | Msa0864300:CDS | 50.0% | |
| GAAAAGTCGAGATGAGGAGG+TGG | + | chr5_4:64559678-64559697 | Msa0864300:CDS | 50.0% | |
| AAAGGGTGGGAGAGGAAATG+TGG | + | chr5_4:64559765-64559784 | Msa0864300:CDS | 50.0% | |
| TGGGAGAGGAAATGTGGAGA+AGG | + | chr5_4:64559771-64559790 | Msa0864300:CDS | 50.0% | |
| ! | CGGTTGGTTGTAGGAGTTGT+TGG | - | chr5_4:64559832-64559851 | None:intergenic | 50.0% |
| TCTTTCACTTTGCAGGGTCG+TGG | + | chr5_4:64560003-64560022 | Msa0864300:intron | 50.0% | |
| GATCTGCTTGACGTACCAGT+TGG | + | chr5_4:64560759-64560778 | Msa0864300:CDS | 50.0% | |
| CTTAGCAGAACGTCTTGACG+TGG | - | chr5_4:64562476-64562495 | None:intergenic | 50.0% | |
| CACGTCAAGACGTTCTGCTA+AGG | + | chr5_4:64562474-64562493 | Msa0864300:CDS | 50.0% | |
| TCCGTAGCAGAGGAGAGAAA+AGG | + | chr5_4:64562639-64562658 | Msa0864300:CDS | 50.0% | |
| TGACACGGAAGATGAGTCTG+AGG | + | chr5_4:64562668-64562687 | Msa0864300:CDS | 50.0% | |
| GCCGGAGAAATCTGAAAGTG+GGG | + | chr5_4:64562761-64562780 | Msa0864300:CDS | 50.0% | |
| GATGCAGAGTGAGTCGACAA+TGG | - | chr5_4:64562933-64562952 | None:intergenic | 50.0% | |
| ACTCACTCTGCATCCGATCA+TGG | + | chr5_4:64562939-64562958 | Msa0864300:CDS | 50.0% | |
| !! | GGAAGACTTGGTGAGAGTTG+AGG | - | chr5_4:64563033-64563052 | None:intergenic | 50.0% |
| GTAATGCCTGACCGAGGATT+AGG | + | chr5_4:64564304-64564323 | Msa0864300:exon | 50.0% | |
| GAGGATTAGGTGTGACTGCT+TGG | + | chr5_4:64564317-64564336 | Msa0864300:three_prime_UTR | 50.0% | |
| AACAAAACCGGGGATGGGGA+AGG | + | chr5_4:64558929-64558948 | Msa0864300:CDS | 55.0% | |
| AGATGAGGAGGTGGGCGATA+AGG | + | chr5_4:64559687-64559706 | Msa0864300:CDS | 55.0% | |
| GGAGGTGGGCGATAAGGATA+AGG | + | chr5_4:64559693-64559712 | Msa0864300:CDS | 55.0% | |
| ! | CGTACAGGACGGTTGGTTGT+AGG | - | chr5_4:64559841-64559860 | None:intergenic | 55.0% |
| CCTTTCACGTACAGGACGGT+TGG | - | chr5_4:64559848-64559867 | None:intergenic | 55.0% | |
| CCAACCGTCCTGTACGTGAA+AGG | + | chr5_4:64559845-64559864 | Msa0864300:CDS | 55.0% | |
| AAAACCACGCTCGGCACGAA+AGG | + | chr5_4:64562893-64562912 | Msa0864300:CDS | 55.0% | |
| AAACCACGCTCGGCACGAAA+GGG | + | chr5_4:64562894-64562913 | Msa0864300:CDS | 55.0% | |
| CGTGGATCTCACCCCAAGAA+AGG | + | chr5_4:64564200-64564219 | Msa0864300:CDS | 55.0% | |
| GTCACACCTAATCCTCGGTC+AGG | - | chr5_4:64564313-64564332 | None:intergenic | 55.0% | |
| AAGGACCCGGAACCTAAGGG+AGG | + | chr5_4:64558764-64558783 | Msa0864300:CDS | 60.0% | |
| GACAGGGTAATGCCTGACCG+AGG | + | chr5_4:64564298-64564317 | Msa0864300:exon | 60.0% | |
| GTTCCCTTTCGTGCCGAGCG+TGG | - | chr5_4:64562900-64562919 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 64558135 | 64564639 | 64558135 | ID=Msa0864300;Name=Msa0864300 |
| chr5_4 | mRNA | 64558135 | 64564639 | 64558135 | ID=Msa0864300-mRNA-1;Parent=Msa0864300;Name=Msa0864300-mRNA-1;_AED=0.10;_eAED=0.10;_QI=457|0.93|0.93|1|0.93|0.93|16|325|964 |
| chr5_4 | exon | 64558135 | 64558539 | 64558135 | ID=Msa0864300-mRNA-1:exon:20289;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64558628 | 64559933 | 64558628 | ID=Msa0864300-mRNA-1:exon:20290;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64560018 | 64560051 | 64560018 | ID=Msa0864300-mRNA-1:exon:20291;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64560175 | 64560290 | 64560175 | ID=Msa0864300-mRNA-1:exon:20292;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64560514 | 64560573 | 64560514 | ID=Msa0864300-mRNA-1:exon:20293;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64560690 | 64560800 | 64560690 | ID=Msa0864300-mRNA-1:exon:20294;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64561268 | 64561348 | 64561268 | ID=Msa0864300-mRNA-1:exon:20295;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64561476 | 64561553 | 64561476 | ID=Msa0864300-mRNA-1:exon:20296;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64561675 | 64561812 | 64561675 | ID=Msa0864300-mRNA-1:exon:20297;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64561936 | 64562019 | 64561936 | ID=Msa0864300-mRNA-1:exon:20298;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64562157 | 64562288 | 64562157 | ID=Msa0864300-mRNA-1:exon:20299;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64562412 | 64562495 | 64562412 | ID=Msa0864300-mRNA-1:exon:20300;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64562615 | 64563068 | 64562615 | ID=Msa0864300-mRNA-1:exon:20301;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64563608 | 64563717 | 64563608 | ID=Msa0864300-mRNA-1:exon:20302;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64563909 | 64563939 | 64563909 | ID=Msa0864300-mRNA-1:exon:20303;Parent=Msa0864300-mRNA-1 |
| chr5_4 | exon | 64564187 | 64564639 | 64564187 | ID=Msa0864300-mRNA-1:exon:20304;Parent=Msa0864300-mRNA-1 |
| chr5_4 | five_prime_UTR | 64558135 | 64558539 | 64558135 | ID=Msa0864300-mRNA-1:five_prime_utr;Parent=Msa0864300-mRNA-1 |
| chr5_4 | five_prime_UTR | 64558628 | 64558679 | 64558628 | ID=Msa0864300-mRNA-1:five_prime_utr;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64558680 | 64559933 | 64558680 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64560018 | 64560051 | 64560018 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64560175 | 64560290 | 64560175 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64560514 | 64560573 | 64560514 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64560690 | 64560800 | 64560690 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64561268 | 64561348 | 64561268 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64561476 | 64561553 | 64561476 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64561675 | 64561812 | 64561675 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64561936 | 64562019 | 64561936 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64562157 | 64562288 | 64562157 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64562412 | 64562495 | 64562412 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64562615 | 64563068 | 64562615 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64563608 | 64563717 | 64563608 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64563909 | 64563939 | 64563909 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | CDS | 64564187 | 64564314 | 64564187 | ID=Msa0864300-mRNA-1:cds;Parent=Msa0864300-mRNA-1 |
| chr5_4 | three_prime_UTR | 64564315 | 64564639 | 64564315 | ID=Msa0864300-mRNA-1:three_prime_utr;Parent=Msa0864300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
