Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744000 | XP_024639466.1 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744000 | sp|F4K4Y5|DEKP4_ARATH | 52.261 | 199 | 78 | 4 | 365 | 558 | 301 | 487 | 5.52e-52 | 199 |
| Msa0744000 | sp|F4K4Y5|DEKP4_ARATH | 41.361 | 191 | 105 | 3 | 763 | 948 | 554 | 742 | 4.33e-23 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744000 | A0A396HZU8 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004920 | Msa0744000 | 0.801721 | 7.878919e-49 | -8.615850e-47 |
| Msa0008110 | Msa0744000 | 0.802141 | 6.459562e-49 | -8.615850e-47 |
| Msa0020930 | Msa0744000 | 0.860365 | 2.172906e-63 | -8.615850e-47 |
| Msa0031340 | Msa0744000 | 0.830754 | 2.457342e-55 | -8.615850e-47 |
| Msa0032920 | Msa0744000 | -0.822873 | 1.876047e-53 | -8.615850e-47 |
| Msa0032960 | Msa0744000 | -0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0045790 | Msa0744000 | 0.823082 | 1.677705e-53 | -8.615850e-47 |
| Msa0046160 | Msa0744000 | 0.826310 | 2.910772e-54 | -8.615850e-47 |
| Msa0068680 | Msa0744000 | 0.852549 | 4.291756e-61 | -8.615850e-47 |
| Msa0075360 | Msa0744000 | 0.805224 | 1.480258e-49 | -8.615850e-47 |
| Msa0078650 | Msa0744000 | 0.822932 | 1.818272e-53 | -8.615850e-47 |
| Msa0094120 | Msa0744000 | 0.811919 | 5.500941e-51 | -8.615850e-47 |
| Msa0114060 | Msa0744000 | 0.836185 | 1.085192e-56 | -8.615850e-47 |
| Msa0604540 | Msa0744000 | 0.800123 | 1.670522e-48 | -8.615850e-47 |
| Msa0606720 | Msa0744000 | 0.819808 | 9.560191e-53 | -8.615850e-47 |
| Msa0606730 | Msa0744000 | 0.804525 | 2.072072e-49 | -8.615850e-47 |
| Msa0616160 | Msa0744000 | 0.808025 | 3.793276e-50 | -8.615850e-47 |
| Msa0626450 | Msa0744000 | 0.817996 | 2.467958e-52 | -8.615850e-47 |
| Msa0626490 | Msa0744000 | 0.822804 | 1.946662e-53 | -8.615850e-47 |
| Msa0627450 | Msa0744000 | 0.829697 | 4.451845e-55 | -8.615850e-47 |
| Msa0638050 | Msa0744000 | 0.803704 | 3.070778e-49 | -8.615850e-47 |
| Msa0639430 | Msa0744000 | 0.806646 | 7.433383e-50 | -8.615850e-47 |
| Msa0655560 | Msa0744000 | 0.806967 | 6.359752e-50 | -8.615850e-47 |
| Msa0662340 | Msa0744000 | 0.828493 | 8.718224e-55 | -8.615850e-47 |
| Msa0664600 | Msa0744000 | 0.813160 | 2.946585e-51 | -8.615850e-47 |
| Msa0667050 | Msa0744000 | 0.801186 | 1.014015e-48 | -8.615850e-47 |
| Msa0677410 | Msa0744000 | 0.812893 | 3.371813e-51 | -8.615850e-47 |
| Msa0682330 | Msa0744000 | 0.818532 | 1.866636e-52 | -8.615850e-47 |
| Msa0683510 | Msa0744000 | 0.813026 | 3.151893e-51 | -8.615850e-47 |
| Msa0689520 | Msa0744000 | 0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa0702830 | Msa0744000 | 0.819798 | 9.611012e-53 | -8.615850e-47 |
| Msa0730430 | Msa0744000 | 0.816733 | 4.749425e-52 | -8.615850e-47 |
| Msa0740510 | Msa0744000 | 0.820015 | 8.574685e-53 | -8.615850e-47 |
| Msa0741840 | Msa0744000 | 0.801315 | 9.541216e-49 | -8.615850e-47 |
| Msa0744000 | Msa0744030 | 0.812853 | 3.440322e-51 | -8.615850e-47 |
| Msa0744000 | Msa0744040 | 0.815550 | 8.727992e-52 | -8.615850e-47 |
| Msa0744000 | Msa0756290 | 0.814098 | 1.831543e-51 | -8.615850e-47 |
| Msa0744000 | Msa0767300 | 0.837582 | 4.775194e-57 | -8.615850e-47 |
| Msa0744000 | Msa0770720 | 0.806716 | 7.187577e-50 | -8.615850e-47 |
| Msa0744000 | Msa0787930 | 0.867418 | 1.388616e-65 | -8.615850e-47 |
| Msa0744000 | Msa0820770 | 0.819466 | 1.144613e-52 | -8.615850e-47 |
| Msa0744000 | Msa0824660 | 0.801084 | 1.063676e-48 | -8.615850e-47 |
| Msa0744000 | Msa0824960 | 0.896735 | 2.773935e-76 | -8.615850e-47 |
| Msa0744000 | Msa0828560 | 0.800495 | 1.403441e-48 | -8.615850e-47 |
| Msa0744000 | Msa0856920 | 0.806142 | 9.496704e-50 | -8.615850e-47 |
| Msa0744000 | Msa0861090 | 0.819307 | 1.244029e-52 | -8.615850e-47 |
| Msa0744000 | Msa0863930 | 0.809651 | 1.703365e-50 | -8.615850e-47 |
| Msa0744000 | Msa0864300 | 0.994286 | 5.016806e-206 | -8.615850e-47 |
| Msa0744000 | Msa0880950 | 0.832073 | 1.163955e-55 | -8.615850e-47 |
| Msa0744000 | Msa0888580 | 0.824854 | 6.442366e-54 | -8.615850e-47 |
| Msa0744000 | Msa0906690 | 0.804879 | 1.747930e-49 | -8.615850e-47 |
| Msa0744000 | Msa0933230 | 0.815487 | 9.015169e-52 | -8.615850e-47 |
| Msa0744000 | Msa0966400 | 0.824886 | 6.330055e-54 | -8.615850e-47 |
| Msa0744000 | Msa0979730 | 0.806331 | 8.665257e-50 | -8.615850e-47 |
| Msa0744000 | Msa1004840 | 0.817891 | 2.605877e-52 | -8.615850e-47 |
| Msa0744000 | Msa1017630 | 0.812540 | 4.028325e-51 | -8.615850e-47 |
| Msa0744000 | Msa1020670 | 0.822986 | 1.766163e-53 | -8.615850e-47 |
| Msa0744000 | Msa1035960 | 0.847899 | 8.635920e-60 | -8.615850e-47 |
| Msa0744000 | Msa1047870 | 0.805855 | 1.091060e-49 | -8.615850e-47 |
| Msa0744000 | Msa1085200 | 0.844875 | 5.764550e-59 | -8.615850e-47 |
| Msa0744000 | Msa1096970 | 0.802168 | 6.377305e-49 | -8.615850e-47 |
| Msa0744000 | Msa1121440 | 0.801427 | 9.051911e-49 | -8.615850e-47 |
| Msa0744000 | Msa1127890 | 0.802020 | 6.838953e-49 | -8.615850e-47 |
| Msa0744000 | Msa1140210 | 0.829929 | 3.910587e-55 | -8.615850e-47 |
| Msa0744000 | Msa1147280 | 0.804922 | 1.711967e-49 | -8.615850e-47 |
| Msa0744000 | Msa1170410 | 0.825869 | 3.705213e-54 | -8.615850e-47 |
| Msa0744000 | Msa1199570 | 0.812739 | 3.643441e-51 | -8.615850e-47 |
| Msa0744000 | Msa1200020 | 0.840063 | 1.089440e-57 | -8.615850e-47 |
| Msa0744000 | Msa1203050 | 0.802513 | 5.412973e-49 | -8.615850e-47 |
| Msa0744000 | Msa1204530 | 0.800418 | 1.455038e-48 | -8.615850e-47 |
| Msa0744000 | Msa1209460 | 0.818509 | 1.888959e-52 | -8.615850e-47 |
| Msa0744000 | Msa1255330 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
| Msa0744000 | Msa1279380 | 0.825624 | 4.234171e-54 | -8.615850e-47 |
| Msa0744000 | Msa1279400 | 0.805470 | 1.314598e-49 | -8.615850e-47 |
| Msa0744000 | Msa1292830 | 0.804973 | 1.670216e-49 | -8.615850e-47 |
| Msa0744000 | Msa1295910 | 0.843244 | 1.578377e-58 | -8.615850e-47 |
| Msa0744000 | Msa1296760 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
| Msa0744000 | Msa1328710 | 0.829868 | 4.046751e-55 | -8.615850e-47 |
| Msa0744000 | Msa1335540 | 0.824540 | 7.637439e-54 | -8.615850e-47 |
| Msa0744000 | Msa1356140 | 0.819957 | 8.839510e-53 | -8.615850e-47 |
| Msa0744000 | Msa1366600 | 0.824377 | 8.341877e-54 | -8.615850e-47 |
| Msa0744000 | Msa1398340 | 0.872063 | 4.239685e-67 | -8.615850e-47 |
| Msa0744000 | Msa1409700 | 0.836619 | 8.413144e-57 | -8.615850e-47 |
| Msa0744000 | Msa1409870 | 0.805157 | 1.528597e-49 | -8.615850e-47 |
| Msa0744000 | Msa1435890 | 0.998417 | 1.830153e-264 | -8.615850e-47 |
| Msa0744000 | Msa1436480 | 0.827526 | 1.490064e-54 | -8.615850e-47 |
| Msa0744000 | Msa1440960 | 0.801289 | 9.658502e-49 | -8.615850e-47 |
| Msa0744000 | Msa1442820 | 0.802121 | 6.518783e-49 | -8.615850e-47 |
| Msa0744000 | Msa1457440 | 0.808152 | 3.563933e-50 | -8.615850e-47 |
| Msa0744000 | Msa1457910 | 0.808999 | 2.349554e-50 | -8.615850e-47 |
| Msa0744000 | Msa1460020 | 0.851126 | 1.087257e-60 | -8.615850e-47 |
| Msa0744000 | Msa1464810 | 0.830854 | 2.323146e-55 | -8.615850e-47 |
| Msa0126370 | Msa0744000 | 0.809367 | 1.959395e-50 | -8.615850e-47 |
| Msa0159930 | Msa0744000 | 0.864226 | 1.415668e-64 | -8.615850e-47 |
| Msa0171290 | Msa0744000 | 0.848213 | 7.074085e-60 | -8.615850e-47 |
| Msa0183050 | Msa0744000 | 0.816187 | 6.292154e-52 | -8.615850e-47 |
| Msa0189320 | Msa0744000 | 0.818933 | 1.513441e-52 | -8.615850e-47 |
| Msa0205850 | Msa0744000 | 0.812991 | 3.208607e-51 | -8.615850e-47 |
| Msa0211150 | Msa0744000 | 0.800884 | 1.169038e-48 | -8.615850e-47 |
| Msa0216240 | Msa0744000 | 0.804285 | 2.324338e-49 | -8.615850e-47 |
| Msa0220580 | Msa0744000 | 0.810512 | 1.110909e-50 | -8.615850e-47 |
| Msa0223690 | Msa0744000 | 0.801711 | 7.914178e-49 | -8.615850e-47 |
| Msa0225740 | Msa0744000 | 0.815762 | 7.828907e-52 | -8.615850e-47 |
| Msa0231650 | Msa0744000 | 0.807349 | 5.277957e-50 | -8.615850e-47 |
| Msa0366240 | Msa0744000 | 0.813688 | 2.254885e-51 | -8.615850e-47 |
| Msa0369850 | Msa0744000 | 0.821695 | 3.521764e-53 | -8.615850e-47 |
| Msa0370380 | Msa0744000 | 0.826915 | 2.086857e-54 | -8.615850e-47 |
| Msa0376350 | Msa0744000 | 0.832325 | 1.008376e-55 | -8.615850e-47 |
| Msa0410650 | Msa0744000 | 0.845528 | 3.840361e-59 | -8.615850e-47 |
| Msa0411160 | Msa0744000 | 0.850283 | 1.876524e-60 | -8.615850e-47 |
| Msa0411190 | Msa0744000 | 0.869069 | 4.079410e-66 | -8.615850e-47 |
| Msa0417270 | Msa0744000 | 0.821031 | 5.010962e-53 | -8.615850e-47 |
| Msa0417880 | Msa0744000 | 0.858214 | 9.605212e-63 | -8.615850e-47 |
| Msa0424790 | Msa0744000 | 0.834533 | 2.837738e-56 | -8.615850e-47 |
| Msa0440750 | Msa0744000 | 0.817908 | 2.583631e-52 | -8.615850e-47 |
| Msa0462390 | Msa0744000 | 0.810561 | 1.084096e-50 | -8.615850e-47 |
| Msa0462430 | Msa0744000 | 0.810367 | 1.193849e-50 | -8.615850e-47 |
| Msa0462480 | Msa0744000 | 0.803423 | 3.511523e-49 | -8.615850e-47 |
| Msa0464380 | Msa0744000 | 0.868568 | 5.927368e-66 | -8.615850e-47 |
| Msa0467430 | Msa0744000 | 0.805183 | 1.509609e-49 | -8.615850e-47 |
| Msa0467490 | Msa0744000 | 0.800111 | 1.680108e-48 | -8.615850e-47 |
| Msa0468150 | Msa0744000 | 0.802845 | 4.624761e-49 | -8.615850e-47 |
| Msa0470690 | Msa0744000 | 0.846951 | 1.572986e-59 | -8.615850e-47 |
| Msa0479170 | Msa0744000 | 0.828832 | 7.219049e-55 | -8.615850e-47 |
| Msa0239480 | Msa0744000 | 0.805350 | 1.393016e-49 | -8.615850e-47 |
| Msa0240110 | Msa0744000 | 0.859363 | 4.357016e-63 | -8.615850e-47 |
| Msa0240150 | Msa0744000 | 0.858999 | 5.601578e-63 | -8.615850e-47 |
| Msa0243100 | Msa0744000 | 0.812559 | 3.989200e-51 | -8.615850e-47 |
| Msa0244860 | Msa0744000 | 0.819827 | 9.465039e-53 | -8.615850e-47 |
| Msa0248970 | Msa0744000 | 0.814251 | 1.694646e-51 | -8.615850e-47 |
| Msa0272770 | Msa0744000 | 0.833888 | 4.117536e-56 | -8.615850e-47 |
| Msa0282790 | Msa0744000 | 0.813149 | 2.961624e-51 | -8.615850e-47 |
| Msa0283450 | Msa0744000 | 0.802636 | 5.106753e-49 | -8.615850e-47 |
| Msa0283520 | Msa0744000 | 0.810596 | 1.065281e-50 | -8.615850e-47 |
| Msa0287650 | Msa0744000 | 0.819229 | 1.295769e-52 | -8.615850e-47 |
| Msa0295070 | Msa0744000 | 0.805315 | 1.416340e-49 | -8.615850e-47 |
| Msa0297740 | Msa0744000 | 0.822029 | 2.947835e-53 | -8.615850e-47 |
| Msa0313020 | Msa0744000 | 0.822833 | 1.916659e-53 | -8.615850e-47 |
| Msa0317730 | Msa0744000 | 0.853433 | 2.397151e-61 | -8.615850e-47 |
| Msa0332000 | Msa0744000 | 0.808419 | 3.126544e-50 | -8.615850e-47 |
| Msa0334490 | Msa0744000 | 0.813896 | 2.028992e-51 | -8.615850e-47 |
| Msa0340090 | Msa0744000 | 0.862775 | 3.991793e-64 | -8.615850e-47 |
| Msa0345970 | Msa0744000 | 0.805624 | 1.220049e-49 | -8.615850e-47 |
| Msa0503060 | Msa0744000 | 0.804501 | 2.096018e-49 | -8.615850e-47 |
| Msa0507680 | Msa0744000 | 0.859589 | 3.724510e-63 | -8.615850e-47 |
| Msa0509610 | Msa0744000 | 0.834729 | 2.532657e-56 | -8.615850e-47 |
| Msa0516170 | Msa0744000 | 0.820388 | 7.044131e-53 | -8.615850e-47 |
| Msa0546680 | Msa0744000 | 0.846044 | 2.780934e-59 | -8.615850e-47 |
| Msa0566310 | Msa0744000 | 0.864815 | 9.267697e-65 | -8.615850e-47 |
| Msa0569200 | Msa0744000 | 0.809250 | 2.076684e-50 | -8.615850e-47 |
| Msa0588230 | Msa0744000 | 0.801925 | 7.152816e-49 | -8.615850e-47 |
| Msa0602460 | Msa0744000 | 0.820570 | 6.395269e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744000 | MtrunA17_Chr5g0446481 | 82.570 | 1004 | 98 | 10 | 1 | 964 | 1 | 967 | 0.0 | 1359 |
| Msa0744000 | MtrunA17_Chr3g0102341 | 56.552 | 290 | 92 | 8 | 383 | 653 | 370 | 644 | 2.28e-80 | 278 |
| Msa0744000 | MtrunA17_Chr3g0102341 | 54.826 | 259 | 105 | 6 | 701 | 949 | 528 | 784 | 1.40e-48 | 186 |
| Msa0744000 | MtrunA17_Chr3g0132011 | 39.688 | 320 | 147 | 10 | 384 | 676 | 91 | 391 | 1.22e-50 | 187 |
| Msa0744000 | MtrunA17_Chr3g0132011 | 34.884 | 258 | 139 | 10 | 695 | 941 | 249 | 488 | 8.93e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0744000 | AT5G55660.1 | 52.261 | 199 | 78 | 4 | 365 | 558 | 301 | 487 | 5.62e-53 | 199 |
| Msa0744000 | AT5G55660.1 | 41.361 | 191 | 105 | 3 | 763 | 948 | 554 | 742 | 4.40e-24 | 109 |
| Msa0744000 | AT4G26630.2 | 53.807 | 197 | 72 | 4 | 380 | 569 | 307 | 491 | 1.30e-49 | 189 |
| Msa0744000 | AT4G26630.2 | 44.792 | 192 | 93 | 4 | 763 | 949 | 551 | 734 | 5.21e-24 | 109 |
| Msa0744000 | AT4G26630.1 | 53.807 | 197 | 72 | 4 | 380 | 569 | 307 | 491 | 1.30e-49 | 189 |
| Msa0744000 | AT4G26630.1 | 44.792 | 192 | 93 | 4 | 763 | 949 | 551 | 734 | 5.21e-24 | 109 |
| Msa0744000 | AT5G63550.2 | 39.667 | 300 | 137 | 6 | 385 | 653 | 94 | 380 | 1.04e-47 | 179 |
| Msa0744000 | AT5G63550.1 | 40.000 | 300 | 135 | 7 | 385 | 653 | 94 | 379 | 1.83e-46 | 175 |
| Msa0744000 | AT3G48710.1 | 32.326 | 430 | 212 | 15 | 384 | 754 | 53 | 462 | 3.25e-36 | 144 |
| Msa0744000 | AT1G64253.3 | 52.381 | 63 | 30 | 0 | 884 | 946 | 122 | 184 | 4.68e-13 | 69.3 |
| Msa0744000 | AT1G64253.2 | 52.381 | 63 | 30 | 0 | 884 | 946 | 254 | 316 | 2.23e-12 | 69.7 |
| Msa0744000 | AT1G64253.1 | 52.381 | 63 | 30 | 0 | 884 | 946 | 330 | 392 | 4.34e-11 | 66.6 |
Find 206 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAACATCCATGGAATTTA+TGG | 0.079462 | 5_1:+64647749 | Msa0744000:three_prime_UTR |
| TGCGAAGCTAATAGACTTTC+TGG | 0.127423 | 5_1:+64644604 | Msa0744000:CDS |
| CTCTTCAATTTGAAATTCTT+TGG | 0.180004 | 5_1:-64643236 | None:intergenic |
| ATGCTCTCATCTTTGGCTTC+AGG | 0.206211 | 5_1:-64642971 | None:intergenic |
| AACTTGGCATTGGATATATT+TGG | 0.223795 | 5_1:+64641549 | Msa0744000:five_prime_UTR |
| ACTTGAGAAAGTATTGAAAA+AGG | 0.225143 | 5_1:+64643072 | Msa0744000:CDS |
| TGCAACGGATTCTTTCTTTC+TGG | 0.237255 | 5_1:-64646163 | None:intergenic |
| GTATTGATATTGTGTATTCT+AGG | 0.238553 | 5_1:+64641817 | Msa0744000:five_prime_UTR |
| GTATCTACCTGCTTTGTCTT+TGG | 0.259843 | 5_1:-64646379 | None:intergenic |
| GTCTTTACAGATGCCTTTCT+TGG | 0.280038 | 5_1:-64647538 | None:intergenic |
| TGTGACCTTCAATAAGCTTT+TGG | 0.284216 | 5_1:-64641850 | None:intergenic |
| TGCCCTCATCTTTGCTTTCA+AGG | 0.287502 | 5_1:-64642775 | None:intergenic |
| TAGCATGTTAATGTCAGTTT+TGG | 0.296740 | 5_1:-64642036 | None:intergenic |
| AGGATAAGAAAGTTAATATT+GGG | 0.305761 | 5_1:+64642609 | Msa0744000:CDS |
| TGATAAAGGGGAAGAATTAA+AGG | 0.309808 | 5_1:+64642586 | Msa0744000:CDS |
| GAGGATAAGAAAGTTAATAT+TGG | 0.311525 | 5_1:+64642608 | Msa0744000:CDS |
| TCATCCATGGCATCTAATTC+AGG | 0.319577 | 5_1:-64642743 | None:intergenic |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | 5_1:+64642536 | Msa0744000:CDS |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | 5_1:+64642572 | Msa0744000:CDS |
| GATAAGAAAGATGATGATAA+TGG | 0.331137 | 5_1:+64642647 | Msa0744000:CDS |
| GTGAGTCGACAATGGTTTCT+TGG | 0.348685 | 5_1:-64646247 | None:intergenic |
| TCTTTACAGATGCCTTTCTT+GGG | 0.349273 | 5_1:-64647537 | None:intergenic |
| TGCTCTCATCTTTGGCTTCA+GGG | 0.352203 | 5_1:-64642970 | None:intergenic |
| ATATTGTGAAATGGTGACTA+TGG | 0.358528 | 5_1:-64641697 | None:intergenic |
| TTAACATCCATGGAATTTAT+GGG | 0.367431 | 5_1:+64647750 | Msa0744000:three_prime_UTR |
| TGGCATTTAAATTATCTAGA+AGG | 0.368252 | 5_1:+64643536 | Msa0744000:CDS |
| CTTGTATTTGCATTCCCAAC+TGG | 0.374686 | 5_1:-64644099 | None:intergenic |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | 5_1:+64642537 | Msa0744000:CDS |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | 5_1:+64642573 | Msa0744000:CDS |
| GCATGAAACTGCATAATTAC+TGG | 0.376456 | 5_1:-64647821 | None:intergenic |
| TTTGTTCTTGATCTTTCTTT+CGG | 0.380948 | 5_1:-64646945 | None:intergenic |
| TTCTTCCTTGAAAAGACCTT+GGG | 0.390073 | 5_1:-64646303 | None:intergenic |
| ACAGAAAACAATAACAAAAC+CGG | 0.394251 | 5_1:+64642242 | Msa0744000:CDS |
| CGGTTGGTTGTAGGAGTTGT+TGG | 0.399867 | 5_1:-64643154 | None:intergenic |
| CGTACAGGACGGTTGGTTGT+AGG | 0.414924 | 5_1:-64643163 | None:intergenic |
| AGGATAAGAAAGTTGATGTT+AGG | 0.418299 | 5_1:+64642393 | Msa0744000:CDS |
| AGCGGGAAAGGAAAGGTTGA+TGG | 0.418499 | 5_1:+64642899 | Msa0744000:CDS |
| TAGTACAAAATATTGTGAAA+TGG | 0.419255 | 5_1:-64641706 | None:intergenic |
| GTAATGCCTGACCGAGGATT+AGG | 0.419284 | 5_1:+64647629 | Msa0744000:exon |
| AGGATAAGAAAGACGATGTA+GGG | 0.420916 | 5_1:+64642357 | Msa0744000:CDS |
| TCCTACAAAAGAGGATTGTA+TGG | 0.423332 | 5_1:-64643585 | None:intergenic |
| ATAGCAAAACAAGGCTCAAC+AGG | 0.431493 | 5_1:+64644822 | Msa0744000:CDS |
| TGACAAATCTGAAGATGAAA+AGG | 0.431708 | 5_1:+64645116 | Msa0744000:CDS |
| GATATTGTGTATTCTAGGAT+TGG | 0.432331 | 5_1:+64641822 | Msa0744000:five_prime_UTR |
| CTTCTTCCTTGAAAAGACCT+TGG | 0.434088 | 5_1:-64646304 | None:intergenic |
| CAGAGAGGATGATAAGGATA+AGG | 0.435697 | 5_1:+64642823 | Msa0744000:CDS |
| ATTTCAGTTGAGATAGCAAT+TGG | 0.436096 | 5_1:+64641574 | Msa0744000:five_prime_UTR |
| TGAGTCGACAATGGTTTCTT+GGG | 0.438135 | 5_1:-64646246 | None:intergenic |
| TGGGGAGGAAGAACTAGAAA+TGG | 0.438759 | 5_1:+64642190 | Msa0744000:CDS |
| TCTACCTGCTTTGTCTTTGG+AGG | 0.441817 | 5_1:-64646376 | None:intergenic |
| AACAATAACAAAACCGGGGA+TGG | 0.443425 | 5_1:+64642248 | Msa0744000:CDS |
| ATAAGAAAGATGATGATAAT+GGG | 0.443554 | 5_1:+64642648 | Msa0744000:CDS |
| AAACAAGGCTCAACAGGATC+TGG | 0.448149 | 5_1:+64644828 | Msa0744000:CDS |
| TTTGTCTTTGGAGGAAGACT+TGG | 0.451286 | 5_1:-64646367 | None:intergenic |
| CCTTTCCTCTCCTACAAAAG+AGG | 0.454663 | 5_1:-64643594 | None:intergenic |
| GAGGGGAAGAAAGCTGATGA+AGG | 0.456835 | 5_1:+64642464 | Msa0744000:CDS |
| AAGAGAACGAAGAGAACGAC+AGG | 0.458455 | 5_1:+64647606 | Msa0744000:CDS |
| GAGGATTAGGTGTGACTGCT+TGG | 0.464707 | 5_1:+64647642 | Msa0744000:three_prime_UTR |
| AAAACCACGCTCGGCACGAA+AGG | 0.466168 | 5_1:+64646218 | Msa0744000:CDS |
| ATCACTTGCAGAACAAGAAA+AGG | 0.466254 | 5_1:+64644652 | Msa0744000:CDS |
| AAACAAGGTTCATCAAGATC+TGG | 0.467180 | 5_1:+64645294 | Msa0744000:CDS |
| AAACAAAGTTCATCGAGATC+TGG | 0.467180 | 5_1:+64645770 | Msa0744000:CDS |
| GAGGATGAGAAAGTTGTTGA+AGG | 0.467739 | 5_1:+64642284 | Msa0744000:CDS |
| AGATGAGGAGGTGGGCGATA+AGG | 0.469853 | 5_1:+64643012 | Msa0744000:CDS |
| ATGAGAAGAAAGTGAGTGAA+AGG | 0.469883 | 5_1:+64646127 | Msa0744000:CDS |
| TCTTTCACTTTGCAGGGTCG+TGG | 0.471388 | 5_1:+64643328 | Msa0744000:intron |
| GGAGGTGGGCGATAAGGATA+AGG | 0.471989 | 5_1:+64643018 | Msa0744000:CDS |
| AGAAGACAGAGAGGATGATA+AGG | 0.474281 | 5_1:+64642817 | Msa0744000:CDS |
| TCCCCACTTTCAGATTTCTC+CGG | 0.474376 | 5_1:-64646087 | None:intergenic |
| GCGGGAAAGGAAAGGTTGAT+GGG | 0.476391 | 5_1:+64642900 | Msa0744000:CDS |
| ATTGATTTAGTGATAAGTGA+TGG | 0.480612 | 5_1:+64641491 | Msa0744000:five_prime_UTR |
| ACTCACTCTGCATCCGATCA+TGG | 0.484372 | 5_1:+64646264 | Msa0744000:CDS |
| TTGATTTAGTGATAAGTGAT+GGG | 0.486399 | 5_1:+64641492 | Msa0744000:five_prime_UTR |
| ACTGATTTCCTTTCACGTAC+AGG | 0.487334 | 5_1:-64643178 | None:intergenic |
| ATGTAACAAAGAGAAGTTGC+TGG | 0.487637 | 5_1:+64644053 | Msa0744000:CDS |
| ATCTGCTTGACGTACCAGTT+GGG | 0.489298 | 5_1:+64644085 | Msa0744000:CDS |
| AAAACTGACATTAACATGCT+AGG | 0.489488 | 5_1:+64642038 | Msa0744000:CDS |
| CAAAGATGAGAGCATTGAAA+AGG | 0.490075 | 5_1:+64642979 | Msa0744000:CDS |
| GAGGACAAGCATGCTGATGA+AGG | 0.491058 | 5_1:+64642320 | Msa0744000:CDS |
| AAACCACGCTCGGCACGAAA+GGG | 0.493787 | 5_1:+64646219 | Msa0744000:CDS |
| CTTGTAAATCTTAACATCCA+TGG | 0.494733 | 5_1:+64647740 | Msa0744000:three_prime_UTR |
| GAGGATAAGAAAGTCAATGA+AGG | 0.495054 | 5_1:+64642428 | Msa0744000:CDS |
| GAAATTGATAAGAAAGCTGA+TGG | 0.495376 | 5_1:+64642170 | Msa0744000:CDS |
| CAAAGATGAGGGCAGTGAAA+AGG | 0.496877 | 5_1:+64642784 | Msa0744000:CDS |
| GAAAAGTCGAGATGAGGAGG+TGG | 0.497804 | 5_1:+64643003 | Msa0744000:CDS |
| GAGGATAAGAAAGACGATGT+AGG | 0.498637 | 5_1:+64642356 | Msa0744000:CDS |
| CTTGTTCCCCATAAATTCCA+TGG | 0.498950 | 5_1:-64647757 | None:intergenic |
| CATCACTGTTTCAAACAGGT+TGG | 0.499557 | 5_1:-64641615 | None:intergenic |
| TAATACCAAAAGCTTATTGA+AGG | 0.503564 | 5_1:+64641845 | Msa0744000:five_prime_UTR |
| ATGTTATCTAAGCACTTCAC+TGG | 0.504941 | 5_1:-64641978 | None:intergenic |
| GTCACACCTAATCCTCGGTC+AGG | 0.506796 | 5_1:-64647635 | None:intergenic |
| CGTGGATCTCACCCCAAGAA+AGG | 0.508523 | 5_1:+64647525 | Msa0744000:CDS |
| AAACTGACATTAACATGCTA+GGG | 0.509499 | 5_1:+64642039 | Msa0744000:CDS |
| CAATAACAAAACCGGGGATG+GGG | 0.511346 | 5_1:+64642250 | Msa0744000:CDS |
| ACAATAACAAAACCGGGGAT+GGG | 0.512246 | 5_1:+64642249 | Msa0744000:CDS |
| AGGGGAAGAAAGCTGATGAA+GGG | 0.512575 | 5_1:+64642465 | Msa0744000:CDS |
| GAGGATAAGAAAGACGATGC+AGG | 0.513407 | 5_1:+64642500 | Msa0744000:CDS |
| TCCGTAGCAGAGGAGAGAAA+AGG | 0.513706 | 5_1:+64645964 | Msa0744000:CDS |
| GAAGCCTGAATTAGATGCCA+TGG | 0.514285 | 5_1:+64642739 | Msa0744000:CDS |
| AAAGAAGGACCCGGAACCTA+AGG | 0.514727 | 5_1:+64642085 | Msa0744000:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | 5_1:+64642538 | Msa0744000:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | 5_1:+64642574 | Msa0744000:CDS |
| GGAGAAAAGTCGAGATGAGG+AGG | 0.517122 | 5_1:+64643000 | Msa0744000:CDS |
| AAAGGGTGGGAGAGGAAATG+TGG | 0.517698 | 5_1:+64643090 | Msa0744000:CDS |
| GACTATTATTCAGCAAGAGC+TGG | 0.518089 | 5_1:+64647558 | Msa0744000:CDS |
| TATTGGGGATGAAATTAAAG+AGG | 0.520170 | 5_1:+64642625 | Msa0744000:CDS |
| GAAGGAACTGAAGAAGATAG+AGG | 0.526671 | 5_1:+64642943 | Msa0744000:CDS |
| CTTTACAGATGCCTTTCTTG+GGG | 0.527928 | 5_1:-64647536 | None:intergenic |
| GGGGAAGAAAGCTGATGAAG+GGG | 0.527985 | 5_1:+64642466 | Msa0744000:CDS |
| TAAAGGGGAAGAATTAAAAG+AGG | 0.528111 | 5_1:+64642553 | Msa0744000:CDS |
| TTGCGTAACTGATCATCACT+CGG | 0.528843 | 5_1:-64646980 | None:intergenic |
| TGAGTCTGAGGAAGAACAGA+AGG | 0.530398 | 5_1:+64646005 | Msa0744000:CDS |
| TGGGAGAGGAAATGTGGAGA+AGG | 0.533504 | 5_1:+64643096 | Msa0744000:CDS |
| CAAAGAATTTCAAATTGAAG+AGG | 0.534513 | 5_1:+64643237 | Msa0744000:CDS |
| TTTAGCTTTACTTTGTGCAA+CGG | 0.534541 | 5_1:-64646178 | None:intergenic |
| CAGAAAACAATAACAAAACC+GGG | 0.534823 | 5_1:+64642243 | Msa0744000:CDS |
| AGGATAAGAAAGTCAATGAA+GGG | 0.536311 | 5_1:+64642429 | Msa0744000:CDS |
| TGTTAGGCAAGAGGTAAAAG+AGG | 0.536428 | 5_1:+64642409 | Msa0744000:CDS |
| CAAATCCAAGGATGAAAAGC+CGG | 0.539070 | 5_1:+64646068 | Msa0744000:CDS |
| AGAAGACTCGAGTGAAAAGA+AGG | 0.540152 | 5_1:+64642070 | Msa0744000:CDS |
| AACAAAACCGGGGATGGGGA+AGG | 0.541916 | 5_1:+64642254 | Msa0744000:CDS |
| AAGGATACTCTCTTCATCCA+TGG | 0.543834 | 5_1:-64642756 | None:intergenic |
| TGAAGGAGAAGAACTAAAAG+AGG | 0.545142 | 5_1:+64642337 | Msa0744000:CDS |
| ATTTAAATTATCTAGAAGGA+AGG | 0.545571 | 5_1:+64643540 | Msa0744000:CDS |
| GTCAAAGATTTGAAAGAGGA+TGG | 0.546722 | 5_1:+64642134 | Msa0744000:CDS |
| CCTTTCACGTACAGGACGGT+TGG | 0.549359 | 5_1:-64643170 | None:intergenic |
| TGTAGGGGAAGAAAGAAAAG+AGG | 0.551335 | 5_1:+64642373 | Msa0744000:CDS |
| GAAAGTTGATGTTAGGCAAG+AGG | 0.551951 | 5_1:+64642400 | Msa0744000:CDS |
| TGCTGTCAAAGATTTGAAAG+AGG | 0.553144 | 5_1:+64642130 | Msa0744000:CDS |
| GATCTGCTTGACGTACCAGT+TGG | 0.553892 | 5_1:+64644084 | Msa0744000:CDS |
| TATTGTGAAATGGTGACTAT+GGG | 0.553990 | 5_1:-64641696 | None:intergenic |
| GGATAAGAAAGACGATGTAG+GGG | 0.555055 | 5_1:+64642358 | Msa0744000:CDS |
| AGAGGATGGTATAAAAGCAA+TGG | 0.556456 | 5_1:+64642148 | Msa0744000:CDS |
| AAAGAAAATGAAGGAACTGA+AGG | 0.559025 | 5_1:+64643123 | Msa0744000:CDS |
| AGGATGAGAAAGTTGTTGAA+GGG | 0.560754 | 5_1:+64642285 | Msa0744000:CDS |
| GTTCCCTTTCGTGCCGAGCG+TGG | 0.562593 | 5_1:-64646222 | None:intergenic |
| ATCATCAAGACGTTCTGCTA+AGG | 0.566618 | 5_1:+64645323 | Msa0744000:CDS |
| TCCATCACTATCACCATGAT+CGG | 0.568310 | 5_1:-64646277 | None:intergenic |
| ATGGATAAGCAAGCTGATGA+TGG | 0.569226 | 5_1:+64642209 | Msa0744000:CDS |
| CACGTCAAGACGTTCTGCTA+AGG | 0.570043 | 5_1:+64645799 | Msa0744000:CDS |
| AGCCGGAGAAATCTGAAAGT+GGG | 0.571709 | 5_1:+64646085 | Msa0744000:CDS |
| AGGATAAGAAAGACGATGCA+GGG | 0.573511 | 5_1:+64642501 | Msa0744000:CDS |
| GGATAAGAAAGTCAATGAAG+GGG | 0.576776 | 5_1:+64642430 | Msa0744000:CDS |
| GATAAGAAAGTCAATGAAGG+GGG | 0.580294 | 5_1:+64642431 | Msa0744000:CDS |
| CAGTTGGGAATGCAAATACA+AGG | 0.581246 | 5_1:+64644100 | Msa0744000:CDS |
| AAGCCGGAGAAATCTGAAAG+TGG | 0.581270 | 5_1:+64646084 | Msa0744000:CDS |
| AACGTCAAGACGATCTGCTA+AGG | 0.582795 | 5_1:+64644857 | Msa0744000:CDS |
| TGGGAATGCAAATACAAGGA+AGG | 0.584888 | 5_1:+64644104 | Msa0744000:CDS |
| AAAGGAGAAAAGTCGAGATG+AGG | 0.585952 | 5_1:+64642997 | Msa0744000:CDS |
| GGAAGACTTGGTGAGAGTTG+AGG | 0.586612 | 5_1:-64646355 | None:intergenic |
| CCAACCGTCCTGTACGTGAA+AGG | 0.587863 | 5_1:+64643170 | Msa0744000:CDS |
| AGTTAAAGCAAAACCACGCT+CGG | 0.590668 | 5_1:+64646209 | Msa0744000:CDS |
| GAAAGATGAAGAAAACAAAG+AGG | 0.591937 | 5_1:+64645074 | Msa0744000:CDS |
| CACTGTTCCTGACAAATCCA+AGG | 0.592153 | 5_1:+64646056 | Msa0744000:CDS |
| TGAAGGGAAAGAAATAAAAG+AGG | 0.595089 | 5_1:+64642301 | Msa0744000:CDS |
| CTCGAGTGAAAAGAAGGACC+CGG | 0.597637 | 5_1:+64642076 | Msa0744000:CDS |
| AAGGAAATCAGTTCAGCGGT+TGG | 0.598635 | 5_1:+64643189 | Msa0744000:CDS |
| ACCGAGTAGCTTCAAAATGT+CGG | 0.599252 | 5_1:-64647244 | None:intergenic |
| GAAAATGAAGGAACTGAAGG+AGG | 0.601330 | 5_1:+64643126 | Msa0744000:CDS |
| GTGAAGTGCTTAGATAACAT+TGG | 0.603102 | 5_1:+64641981 | Msa0744000:five_prime_UTR |
| TGAAGATTCTTCCGTAGCAG+AGG | 0.604934 | 5_1:+64645954 | Msa0744000:CDS |
| TGATAAGAAAGCTGATGGGG+AGG | 0.606760 | 5_1:+64642175 | Msa0744000:CDS |
| TCTTCCTCCAAAGACAAAGC+AGG | 0.608589 | 5_1:+64646372 | Msa0744000:CDS |
| TGCAGGGGTAGAATTAAAAG+AGG | 0.613557 | 5_1:+64642517 | Msa0744000:CDS |
| AAGCAGTCACACCTAATCCT+CGG | 0.613596 | 5_1:-64647640 | None:intergenic |
| GGATAAGAAAGTTAATATTG+GGG | 0.615197 | 5_1:+64642610 | Msa0744000:CDS |
| TATCCTTGAAAGCAAAGATG+AGG | 0.617284 | 5_1:+64642772 | Msa0744000:CDS |
| AAAAGTCGAGATGAGGAGGT+GGG | 0.619228 | 5_1:+64643004 | Msa0744000:CDS |
| TAACATCCATGGAATTTATG+GGG | 0.619414 | 5_1:+64647751 | Msa0744000:three_prime_UTR |
| AAGAAGGACCCGGAACCTAA+GGG | 0.623031 | 5_1:+64642086 | Msa0744000:CDS |
| GGATAAGAAAGACGATGCAG+GGG | 0.625327 | 5_1:+64642502 | Msa0744000:CDS |
| TGCGTAACTGATCATCACTC+GGG | 0.628020 | 5_1:-64646979 | None:intergenic |
| GCCGGAGAAATCTGAAAGTG+GGG | 0.631822 | 5_1:+64646086 | Msa0744000:CDS |
| AAATTGATAAGAAAGCTGAT+GGG | 0.632945 | 5_1:+64642171 | Msa0744000:CDS |
| TCCGATCATGGTGATAGTGA+TGG | 0.633583 | 5_1:+64646276 | Msa0744000:CDS |
| CGGGAAAGGAAAGGTTGATG+GGG | 0.636918 | 5_1:+64642901 | Msa0744000:CDS |
| TGATTTAGTGATAAGTGATG+GGG | 0.639144 | 5_1:+64641493 | Msa0744000:five_prime_UTR |
| GACTGCTTGGATATATACAT+AGG | 0.639381 | 5_1:+64647655 | Msa0744000:three_prime_UTR |
| TGACACGGAAGATGAGTCTG+AGG | 0.639914 | 5_1:+64645993 | Msa0744000:CDS |
| ATTTCCTTTCACGTACAGGA+CGG | 0.640045 | 5_1:-64643174 | None:intergenic |
| CTTAGCAGAACGTCTTGACG+TGG | 0.642847 | 5_1:-64645798 | None:intergenic |
| AGATAACATTGGCATGAGTG+AGG | 0.643975 | 5_1:+64641992 | Msa0744000:exon |
| ATCCTTGAAAGCAAAGATGA+GGG | 0.644303 | 5_1:+64642773 | Msa0744000:CDS |
| TACAAAAGAGGATTGTATGG+AGG | 0.648735 | 5_1:-64643582 | None:intergenic |
| GGATGGGGAAGGAATAAAAG+AGG | 0.653046 | 5_1:+64642265 | Msa0744000:CDS |
| TGATAGTGATGGAAGTCCCA+AGG | 0.653632 | 5_1:+64646287 | Msa0744000:CDS |
| TAAAGGGGAAGAATTAAAGG+AGG | 0.653663 | 5_1:+64642589 | Msa0744000:CDS |
| TTTATGGGGAACAAGCCAGT+AGG | 0.654503 | 5_1:+64647765 | Msa0744000:three_prime_UTR |
| CCTTTAGAAAATATACCCAA+TGG | 0.655466 | 5_1:+64643355 | Msa0744000:CDS |
| TTAGCAGATCGTCTTGACGT+TGG | 0.655765 | 5_1:-64644855 | None:intergenic |
| AATTGATAAGAAAGCTGATG+GGG | 0.657202 | 5_1:+64642172 | Msa0744000:CDS |
| GATGCAGAGTGAGTCGACAA+TGG | 0.657519 | 5_1:-64646255 | None:intergenic |
| AAACAGCGCATAGCAAAACA+AGG | 0.662113 | 5_1:+64644813 | Msa0744000:CDS |
| TGAAACAGTGATGAAAATTG+CGG | 0.662904 | 5_1:+64641625 | Msa0744000:five_prime_UTR |
| GATACACTTGTTGTGACTTG+AGG | 0.670370 | 5_1:-64644632 | None:intergenic |
| GAGAAAAGGATTTACTGACA+CGG | 0.671908 | 5_1:+64645978 | Msa0744000:CDS |
| AAGGACCCGGAACCTAAGGG+AGG | 0.685854 | 5_1:+64642089 | Msa0744000:CDS |
| TTCAGGTAAGCAATTCGACG+TGG | 0.687225 | 5_1:+64647507 | Msa0744000:intron |
| GTGAAAGGAAATCAGTTCAG+CGG | 0.696158 | 5_1:+64643185 | Msa0744000:CDS |
| TTTCACTCGAGTCTTCTAGG+TGG | 0.696693 | 5_1:-64642064 | None:intergenic |
| ATTGTGAAATGGTGACTATG+GGG | 0.697187 | 5_1:-64641695 | None:intergenic |
| TGAGAATGACAAATTCAGTG+AGG | 0.705125 | 5_1:+64642673 | Msa0744000:CDS |
| AGAGAACGAAGAGAACGACA+GGG | 0.709851 | 5_1:+64647607 | Msa0744000:CDS |
| TTGTGAAATGGTGACTATGG+GGG | 0.710251 | 5_1:-64641694 | None:intergenic |
| AGAAAACAATAACAAAACCG+GGG | 0.717065 | 5_1:+64642244 | Msa0744000:CDS |
| GACAGGGTAATGCCTGACCG+AGG | 0.722362 | 5_1:+64647623 | Msa0744000:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATAATATTATAAAA+AGG | + | chr5_1:64646653-64646672 | Msa0744000:intron | 0.0% |
| !! | TGATTAAGAAAAATATATTA+AGG | + | chr5_1:64643846-64643865 | Msa0744000:CDS | 10.0% |
| !! | ACATTTAATCATAAAATTAA+GGG | - | chr5_1:64646468-64646487 | None:intergenic | 10.0% |
| !! | AACATTTAATCATAAAATTA+AGG | - | chr5_1:64646469-64646488 | None:intergenic | 10.0% |
| !!! | ATTTTATGATTAAATGTTTT+TGG | + | chr5_1:64646471-64646490 | Msa0744000:intron | 10.0% |
| !!! | TTTTTTTTACAAGAAAAAAA+AGG | - | chr5_1:64646541-64646560 | None:intergenic | 10.0% |
| !!! | AAATAACATATTTTTAACAA+AGG | + | chr5_1:64646685-64646704 | Msa0744000:intron | 10.0% |
| !!! | AATAACATATTTTTAACAAA+GGG | + | chr5_1:64646686-64646705 | Msa0744000:intron | 10.0% |
| !! | TTAAAATTAAAATCAACATT+AGG | - | chr5_1:64647144-64647163 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACACTGAT+AGG | + | chr5_1:64641931-64641950 | Msa0744000:intron | 15.0% |
| !!! | ATATTTTAACAGATAACAAA+TGG | - | chr5_1:64643671-64643690 | None:intergenic | 15.0% |
| !!! | AAAAATATATTAAGGTTTTC+TGG | + | chr5_1:64643854-64643873 | Msa0744000:CDS | 15.0% |
| !! | ATTTATACTACTATTATACT+CGG | + | chr5_1:64644392-64644411 | Msa0744000:intron | 15.0% |
| !! | TGATTTATAACCAATAAATT+TGG | + | chr5_1:64644948-64644967 | Msa0744000:intron | 15.0% |
| !!! | TGCTTTAAAACTAATAAATT+TGG | + | chr5_1:64645430-64645449 | Msa0744000:intron | 15.0% |
| !!! | AATATTAAACCTCTAAAAAA+AGG | - | chr5_1:64646573-64646592 | None:intergenic | 15.0% |
| !! | TGAAATCTGTAATATAAAAA+GGG | - | chr5_1:64646752-64646771 | None:intergenic | 15.0% |
| !! | ATGAAATCTGTAATATAAAA+AGG | - | chr5_1:64646753-64646772 | None:intergenic | 15.0% |
| !! | AAAAAGGTAATAATAAAGAA+GGG | - | chr5_1:64647275-64647294 | None:intergenic | 15.0% |
| !! | TAGTACAAAATATTGTGAAA+TGG | - | chr5_1:64641709-64641728 | None:intergenic | 20.0% |
| !!! | TCACAATATTTTGTACTAAA+TGG | + | chr5_1:64641711-64641730 | Msa0744000:five_prime_UTR | 20.0% |
| !!! | TTGAAACAATCTTTCATTTT+AGG | + | chr5_1:64641780-64641799 | Msa0744000:five_prime_UTR | 20.0% |
| !! | AGGATAAGAAAGTTAATATT+GGG | + | chr5_1:64642609-64642628 | Msa0744000:CDS | 20.0% |
| !! | ATAAGAAAGATGATGATAAT+GGG | + | chr5_1:64642648-64642667 | Msa0744000:CDS | 20.0% |
| !! | TTCAATATAACACACAATTA+AGG | - | chr5_1:64643287-64643306 | None:intergenic | 20.0% |
| !! | AGAGAATATATAGATCATAA+TGG | - | chr5_1:64643412-64643431 | None:intergenic | 20.0% |
| !! | ATTTAAATTATCTAGAAGGA+AGG | + | chr5_1:64643540-64643559 | Msa0744000:CDS | 20.0% |
| !! | TGACTGAAATGAAAAAAATT+AGG | - | chr5_1:64643641-64643660 | None:intergenic | 20.0% |
| !! | AATTTCATTATTCAAGGTAA+GGG | - | chr5_1:64643757-64643776 | None:intergenic | 20.0% |
| !! | TAATTTCATTATTCAAGGTA+AGG | - | chr5_1:64643758-64643777 | None:intergenic | 20.0% |
| !! | ACCTTGAATAATGAAATTAA+CGG | + | chr5_1:64643759-64643778 | Msa0744000:intron | 20.0% |
| !!! | TTGAATTTTTGTAACATTAC+AGG | + | chr5_1:64644260-64644279 | Msa0744000:intron | 20.0% |
| !! | TATCTAATTAATGTGTATTC+CGG | - | chr5_1:64644286-64644305 | None:intergenic | 20.0% |
| !!! | AATCAATATGTTAAAAGCAT+CGG | - | chr5_1:64644349-64644368 | None:intergenic | 20.0% |
| !! | ATTTAGATATATACCATAAG+TGG | + | chr5_1:64644920-64644939 | Msa0744000:intron | 20.0% |
| !!! | AATTGTTTTTTTAGAGAAAG+TGG | + | chr5_1:64645402-64645421 | Msa0744000:intron | 20.0% |
| !! | AAATGTAACTAGATATATGA+TGG | + | chr5_1:64645854-64645873 | Msa0744000:intron | 20.0% |
| !! | AAGAAGAAAAATGAAAAACA+AGG | + | chr5_1:64646321-64646340 | Msa0744000:CDS | 20.0% |
| !! | AAAAAGGGAATAATCTATTT+GGG | - | chr5_1:64646737-64646756 | None:intergenic | 20.0% |
| !! | TAAAAAGGGAATAATCTATT+TGG | - | chr5_1:64646738-64646757 | None:intergenic | 20.0% |
| !! | AGATTTATAAACTACATAAG+AGG | - | chr5_1:64646894-64646913 | None:intergenic | 20.0% |
| !! | CAAAAAGGTAATAATAAAGA+AGG | - | chr5_1:64647276-64647295 | None:intergenic | 20.0% |
| !! | TCATTATTAAACTTAAACCA+AGG | - | chr5_1:64647300-64647319 | None:intergenic | 20.0% |
| !!! | GTTTCTTTATTTATCAAAGA+CGG | + | chr5_1:64647383-64647402 | Msa0744000:intron | 20.0% |
| ! | GAAAAAATGTTAGAACAACA+TGG | - | chr5_1:64641471-64641490 | None:intergenic | 25.0% |
| !! | ATTGATTTAGTGATAAGTGA+TGG | + | chr5_1:64641491-64641510 | Msa0744000:five_prime_UTR | 25.0% |
| ! | TTGATTTAGTGATAAGTGAT+GGG | + | chr5_1:64641492-64641511 | Msa0744000:five_prime_UTR | 25.0% |
| !! | GTATTGATATTGTGTATTCT+AGG | + | chr5_1:64641817-64641836 | Msa0744000:five_prime_UTR | 25.0% |
| ! | TAATACCAAAAGCTTATTGA+AGG | + | chr5_1:64641845-64641864 | Msa0744000:five_prime_UTR | 25.0% |
| ! | AAATTGATAAGAAAGCTGAT+GGG | + | chr5_1:64642171-64642190 | Msa0744000:CDS | 25.0% |
| ! | ACAGAAAACAATAACAAAAC+CGG | + | chr5_1:64642242-64642261 | Msa0744000:CDS | 25.0% |
| ! | GAGGATAAGAAAGTTAATAT+TGG | + | chr5_1:64642608-64642627 | Msa0744000:CDS | 25.0% |
| ! | GGATAAGAAAGTTAATATTG+GGG | + | chr5_1:64642610-64642629 | Msa0744000:CDS | 25.0% |
| ! | GATAAGAAAGATGATGATAA+TGG | + | chr5_1:64642647-64642666 | Msa0744000:CDS | 25.0% |
| ! | GAATGTGAAAAAGAAAATGA+AGG | + | chr5_1:64642925-64642944 | Msa0744000:CDS | 25.0% |
| !!! | ACTTGAGAAAGTATTGAAAA+AGG | + | chr5_1:64643072-64643091 | Msa0744000:CDS | 25.0% |
| !!! | CTTGAGAAAGTATTGAAAAA+GGG | + | chr5_1:64643073-64643092 | Msa0744000:CDS | 25.0% |
| !! | CTCTTCAATTTGAAATTCTT+TGG | - | chr5_1:64643239-64643258 | None:intergenic | 25.0% |
| ! | CAAAGAATTTCAAATTGAAG+AGG | + | chr5_1:64643237-64643256 | Msa0744000:CDS | 25.0% |
| ! | GAAAGAAGAATTCAAACAAA+TGG | - | chr5_1:64643390-64643409 | None:intergenic | 25.0% |
| ! | TGGCATTTAAATTATCTAGA+AGG | + | chr5_1:64643536-64643555 | Msa0744000:CDS | 25.0% |
| ! | TCCGTTAATTTCATTATTCA+AGG | - | chr5_1:64643763-64643782 | None:intergenic | 25.0% |
| !!! | TCATTTTGTTATATATGACC+TGG | - | chr5_1:64643921-64643940 | None:intergenic | 25.0% |
| ! | AGATGTTAAGTCAACAAAAA+AGG | - | chr5_1:64644522-64644541 | None:intergenic | 25.0% |
| ! | TATTAATCTTCTACATATGC+AGG | + | chr5_1:64644571-64644590 | Msa0744000:intron | 25.0% |
| ! | AGGAAAAAGTTGAAAAGAAA+GGG | - | chr5_1:64644690-64644709 | None:intergenic | 25.0% |
| ! | ATAAATCACTTTACCACTTA+TGG | - | chr5_1:64644936-64644955 | None:intergenic | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+TGG | - | chr5_1:64644961-64644980 | None:intergenic | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+TGG | + | chr5_1:64644965-64644984 | Msa0744000:intron | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | chr5_1:64645175-64645194 | None:intergenic | 25.0% |
| ! | CAGAATAAAATAACACACTA+GGG | - | chr5_1:64645176-64645195 | None:intergenic | 25.0% |
| ! | AAAAAACAATTTATCGCTTC+TGG | - | chr5_1:64645393-64645412 | None:intergenic | 25.0% |
| ! | TGAAAAATCTGAAGATGAAA+AGG | + | chr5_1:64645592-64645611 | Msa0744000:CDS | 25.0% |
| ! | GGAAAAGTTTGAAAAGAAAA+GGG | - | chr5_1:64645630-64645649 | None:intergenic | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | chr5_1:64645175-64645194 | None:intergenic | 25.0% |
| ! | GAGAATAAAATAACACACTA+GGG | - | chr5_1:64645652-64645671 | None:intergenic | 25.0% |
| ! | AGAGAATAAAATAACACACT+AGG | - | chr5_1:64645653-64645672 | None:intergenic | 25.0% |
| !! | TACTTTTATCAGTCGATTAA+AGG | + | chr5_1:64645725-64645744 | Msa0744000:intron | 25.0% |
| !!! | TGCTTTAAAACCGATAAATT+TGG | + | chr5_1:64645888-64645907 | Msa0744000:intron | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+CGG | - | chr5_1:64644961-64644980 | None:intergenic | 25.0% |
| !!! | AATTTGGCTTTCTAATCTTT+AGG | + | chr5_1:64644964-64644983 | Msa0744000:intron | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+GGG | + | chr5_1:64644965-64644984 | Msa0744000:intron | 25.0% |
| ! | ACTAGAAATATTTAGAAAGG+CGG | - | chr5_1:64646444-64646463 | None:intergenic | 25.0% |
| ! | GGTACTAGAAATATTTAGAA+AGG | - | chr5_1:64646447-64646466 | None:intergenic | 25.0% |
| ! | TGGCAAAGAAGATTAAAATA+AGG | + | chr5_1:64646491-64646510 | Msa0744000:intron | 25.0% |
| !!! | ATCATTGTTCCTTTTTTTAG+AGG | + | chr5_1:64646561-64646580 | Msa0744000:intron | 25.0% |
| ! | TAATATTGTTCCATTGTAAG+AGG | + | chr5_1:64646586-64646605 | Msa0744000:intron | 25.0% |
| ! | TTTGTTCTTGATCTTTCTTT+CGG | - | chr5_1:64646948-64646967 | None:intergenic | 25.0% |
| ! | TAAAATCAACATTAGGATGT+AGG | - | chr5_1:64647137-64647156 | None:intergenic | 25.0% |
| !! | TATTATTACCTTTTTGTCCT+TGG | + | chr5_1:64647280-64647299 | Msa0744000:intron | 25.0% |
| !! | ACAAATGAGTGTAACTTTTA+TGG | + | chr5_1:64647348-64647367 | Msa0744000:intron | 25.0% |
| !!! | TTTTGACTAGTTATGCATTT+TGG | + | chr5_1:64647687-64647706 | Msa0744000:three_prime_UTR | 25.0% |
| !!! | TTTGACTAGTTATGCATTTT+GGG | + | chr5_1:64647688-64647707 | Msa0744000:three_prime_UTR | 25.0% |
| ! | TTAACATCCATGGAATTTAT+GGG | + | chr5_1:64647750-64647769 | Msa0744000:three_prime_UTR | 25.0% |
| !! | AATATGTAAAGAAGCTTTTG+TGG | + | chr5_1:64647858-64647877 | Msa0744000:three_prime_UTR | 25.0% |
| TGATTTAGTGATAAGTGATG+GGG | + | chr5_1:64641493-64641512 | Msa0744000:five_prime_UTR | 30.0% | |
| !! | ATTGCAACTTGTTTTCAACT+TGG | + | chr5_1:64641533-64641552 | Msa0744000:five_prime_UTR | 30.0% |
| ! | AACTTGGCATTGGATATATT+TGG | + | chr5_1:64641549-64641568 | Msa0744000:five_prime_UTR | 30.0% |
| ATTTCAGTTGAGATAGCAAT+TGG | + | chr5_1:64641574-64641593 | Msa0744000:five_prime_UTR | 30.0% | |
| ! | TTTTCATCACTGTTTCAAAC+AGG | - | chr5_1:64641622-64641641 | None:intergenic | 30.0% |
| TGAAACAGTGATGAAAATTG+CGG | + | chr5_1:64641625-64641644 | Msa0744000:five_prime_UTR | 30.0% | |
| TATTGTGAAATGGTGACTAT+GGG | - | chr5_1:64641699-64641718 | None:intergenic | 30.0% | |
| ATATTGTGAAATGGTGACTA+TGG | - | chr5_1:64641700-64641719 | None:intergenic | 30.0% | |
| !! | GATATTGTGTATTCTAGGAT+TGG | + | chr5_1:64641822-64641841 | Msa0744000:five_prime_UTR | 30.0% |
| CAACATGCAAAAAAAGAAAG+AGG | - | chr5_1:64641885-64641904 | None:intergenic | 30.0% | |
| ! | TAGCATGTTAATGTCAGTTT+TGG | - | chr5_1:64642039-64642058 | None:intergenic | 30.0% |
| AAAACTGACATTAACATGCT+AGG | + | chr5_1:64642038-64642057 | Msa0744000:CDS | 30.0% | |
| AAACTGACATTAACATGCTA+GGG | + | chr5_1:64642039-64642058 | Msa0744000:CDS | 30.0% | |
| GAAATTGATAAGAAAGCTGA+TGG | + | chr5_1:64642170-64642189 | Msa0744000:CDS | 30.0% | |
| AATTGATAAGAAAGCTGATG+GGG | + | chr5_1:64642172-64642191 | Msa0744000:CDS | 30.0% | |
| CAGAAAACAATAACAAAACC+GGG | + | chr5_1:64642243-64642262 | Msa0744000:CDS | 30.0% | |
| AGAAAACAATAACAAAACCG+GGG | + | chr5_1:64642244-64642263 | Msa0744000:CDS | 30.0% | |
| TGAAGGGAAAGAAATAAAAG+AGG | + | chr5_1:64642301-64642320 | Msa0744000:CDS | 30.0% | |
| !! | AGGATAAGAAAGTTGATGTT+AGG | + | chr5_1:64642393-64642412 | Msa0744000:CDS | 30.0% |
| AGGATAAGAAAGTCAATGAA+GGG | + | chr5_1:64642429-64642448 | Msa0744000:CDS | 30.0% | |
| TGAAGGGGAAAAATTAAAAG+AGG | + | chr5_1:64642481-64642500 | Msa0744000:CDS | 30.0% | |
| TAAAGGGGAAGAATTAAAAG+AGG | + | chr5_1:64642553-64642572 | Msa0744000:CDS | 30.0% | |
| TGATAAAGGGGAAGAATTAA+AGG | + | chr5_1:64642550-64642569 | Msa0744000:CDS | 30.0% | |
| TATTGGGGATGAAATTAAAG+AGG | + | chr5_1:64642625-64642644 | Msa0744000:CDS | 30.0% | |
| GAGAAGAGATTGAAAAAAAG+CGG | + | chr5_1:64642881-64642900 | Msa0744000:CDS | 30.0% | |
| AGAAGAGATTGAAAAAAAGC+GGG | + | chr5_1:64642882-64642901 | Msa0744000:CDS | 30.0% | |
| !! | AGAAAGTATTGAAAAAGGGT+GGG | + | chr5_1:64643077-64643096 | Msa0744000:CDS | 30.0% |
| AAAGAAAATGAAGGAACTGA+AGG | + | chr5_1:64642934-64642953 | Msa0744000:CDS | 30.0% | |
| ! | TAGTTTTTCTTTCACTTTGC+AGG | + | chr5_1:64643321-64643340 | Msa0744000:intron | 30.0% |
| ! | AGTTTTTCTTTCACTTTGCA+GGG | + | chr5_1:64643322-64643341 | Msa0744000:intron | 30.0% |
| ! | CCATTGGGTATATTTTCTAA+AGG | - | chr5_1:64643358-64643377 | None:intergenic | 30.0% |
| ! | CCTTTAGAAAATATACCCAA+TGG | + | chr5_1:64643355-64643374 | Msa0744000:CDS | 30.0% |
| AAATGGAACACTATACCATT+GGG | - | chr5_1:64643373-64643392 | None:intergenic | 30.0% | |
| ! | AATTAGGTTGTTCATGAAGT+AGG | - | chr5_1:64643625-64643644 | None:intergenic | 30.0% |
| ATATCCTTAACTATAGAGGT+GGG | - | chr5_1:64643701-64643720 | None:intergenic | 30.0% | |
| AATATCCTTAACTATAGAGG+TGG | - | chr5_1:64643702-64643721 | None:intergenic | 30.0% | |
| ACCTCTATAGTTAAGGATAT+TGG | + | chr5_1:64643701-64643720 | Msa0744000:intron | 30.0% | |
| TCCAATATCCTTAACTATAG+AGG | - | chr5_1:64643705-64643724 | None:intergenic | 30.0% | |
| TTCATCCTTAGACTGTTAAA+AGG | + | chr5_1:64643728-64643747 | Msa0744000:intron | 30.0% | |
| ! | TGTTTTACTATGTAATTCGC+AGG | + | chr5_1:64643817-64643836 | Msa0744000:intron | 30.0% |
| AAACCAAATATTGTTACTGC+AGG | + | chr5_1:64643993-64644012 | Msa0744000:intron | 30.0% | |
| TTTCCTGCAGTAACAATATT+TGG | - | chr5_1:64643999-64644018 | None:intergenic | 30.0% | |
| AATATTGTTACTGCAGGAAA+AGG | + | chr5_1:64643999-64644018 | Msa0744000:intron | 30.0% | |
| ATACAACAAATGTGTCAACA+GGG | - | chr5_1:64644144-64644163 | None:intergenic | 30.0% | |
| ! | ATTTTTGTAACATTACAGGC+CGG | + | chr5_1:64644264-64644283 | Msa0744000:intron | 30.0% |
| AACGGCATAATAAATTGCTA+CGG | - | chr5_1:64644311-64644330 | None:intergenic | 30.0% | |
| CGGTAATTCATTATAGACAA+CGG | - | chr5_1:64644329-64644348 | None:intergenic | 30.0% | |
| GAGGAAAAAGTTGAAAAGAA+AGG | - | chr5_1:64644691-64644710 | None:intergenic | 30.0% | |
| ACAGAATAAAGTAACACACT+AGG | - | chr5_1:64644717-64644736 | None:intergenic | 30.0% | |
| CCTTTAGTTGACTGAAAATA+GGG | - | chr5_1:64644792-64644811 | None:intergenic | 30.0% | |
| TCCTTTAGTTGACTGAAAAT+AGG | - | chr5_1:64644793-64644812 | None:intergenic | 30.0% | |
| !! | TATGGTATATTTTTCAGCGT+CGG | + | chr5_1:64644983-64645002 | Msa0744000:intron | 30.0% |
| GAAAGATGAAGAAAACAAAG+AGG | + | chr5_1:64645074-64645093 | Msa0744000:CDS | 30.0% | |
| TGACAAATCTGAAGATGAAA+AGG | + | chr5_1:64645116-64645135 | Msa0744000:CDS | 30.0% | |
| GGAAAAGGTTGAAAAGAAAA+GGG | - | chr5_1:64645154-64645173 | None:intergenic | 30.0% | |
| GCAGAATAAAATAACACACT+AGG | - | chr5_1:64645177-64645196 | None:intergenic | 30.0% | |
| !! | TATGGTACATTTTTCAGAGT+CGG | + | chr5_1:64645465-64645484 | Msa0744000:intron | 30.0% |
| GGGAAAAGTTTGAAAAGAAA+AGG | - | chr5_1:64645631-64645650 | None:intergenic | 30.0% | |
| !! | TAGGGTATATTTTTCAGAGT+CGG | + | chr5_1:64645923-64645942 | Msa0744000:intron | 30.0% |
| !! | TTTAGCTTTACTTTGTGCAA+CGG | - | chr5_1:64646181-64646200 | None:intergenic | 30.0% |
| TAAACAAAAAAACTGAGAGG+CGG | - | chr5_1:64646420-64646439 | None:intergenic | 30.0% | |
| GGATAAACAAAAAAACTGAG+AGG | - | chr5_1:64646423-64646442 | None:intergenic | 30.0% | |
| ATATGAACTACCTCTTACAA+TGG | - | chr5_1:64646599-64646618 | None:intergenic | 30.0% | |
| TACATAAGAGGAAGAAGTTA+AGG | - | chr5_1:64646882-64646901 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTTTCCAGAAGAAA+AGG | + | chr5_1:64646919-64646938 | Msa0744000:intron | 30.0% |
| ATTCCTTCATCAATAACTAG+TGG | + | chr5_1:64647073-64647092 | Msa0744000:intron | 30.0% | |
| ATTCCACTAGTTATTGATGA+AGG | - | chr5_1:64647079-64647098 | None:intergenic | 30.0% | |
| AACTTAAACCAAGGACAAAA+AGG | - | chr5_1:64647291-64647310 | None:intergenic | 30.0% | |
| AGTTACACTCATTTGTAATC+TGG | - | chr5_1:64647344-64647363 | None:intergenic | 30.0% | |
| !! | TTGACTAGTTATGCATTTTG+GGG | + | chr5_1:64647689-64647708 | Msa0744000:three_prime_UTR | 30.0% |
| CTTGTAAATCTTAACATCCA+TGG | + | chr5_1:64647740-64647759 | Msa0744000:three_prime_UTR | 30.0% | |
| CTTAACATCCATGGAATTTA+TGG | + | chr5_1:64647749-64647768 | Msa0744000:three_prime_UTR | 30.0% | |
| TAACATCCATGGAATTTATG+GGG | + | chr5_1:64647751-64647770 | Msa0744000:three_prime_UTR | 30.0% | |
| CACAAAAAAAATGAACCTAC+TGG | - | chr5_1:64647783-64647802 | None:intergenic | 30.0% | |
| !!! | CAGTAGGTTCATTTTTTTTG+TGG | + | chr5_1:64647781-64647800 | Msa0744000:three_prime_UTR | 30.0% |
| !!! | TAGGTTCATTTTTTTTGTGG+TGG | + | chr5_1:64647784-64647803 | Msa0744000:three_prime_UTR | 30.0% |
| !! | ACTTGTTTTCAACTTGGCAT+TGG | + | chr5_1:64641539-64641558 | Msa0744000:five_prime_UTR | 35.0% |
| ATTGTGAAATGGTGACTATG+GGG | - | chr5_1:64641698-64641717 | None:intergenic | 35.0% | |
| ! | TGTGACCTTCAATAAGCTTT+TGG | - | chr5_1:64641853-64641872 | None:intergenic | 35.0% |
| ATGTTATCTAAGCACTTCAC+TGG | - | chr5_1:64641981-64642000 | None:intergenic | 35.0% | |
| ! | GTGAAGTGCTTAGATAACAT+TGG | + | chr5_1:64641981-64642000 | Msa0744000:five_prime_UTR | 35.0% |
| !!! | GTTTTGGAAGCTGTATTAAC+TGG | - | chr5_1:64642023-64642042 | None:intergenic | 35.0% |
| ! | TCAAAGATTTTTCCTCCCTT+AGG | - | chr5_1:64642104-64642123 | None:intergenic | 35.0% |
| TAAGGGAGGAAAAATCTTTG+AGG | + | chr5_1:64642103-64642122 | Msa0744000:CDS | 35.0% | |
| TGCTGTCAAAGATTTGAAAG+AGG | + | chr5_1:64642130-64642149 | Msa0744000:CDS | 35.0% | |
| GTCAAAGATTTGAAAGAGGA+TGG | + | chr5_1:64642134-64642153 | Msa0744000:CDS | 35.0% | |
| AGAGGATGGTATAAAAGCAA+TGG | + | chr5_1:64642148-64642167 | Msa0744000:CDS | 35.0% | |
| AGGATGAGAAAGTTGTTGAA+GGG | + | chr5_1:64642285-64642304 | Msa0744000:CDS | 35.0% | |
| TGAAGGAGAAGAACTAAAAG+AGG | + | chr5_1:64642337-64642356 | Msa0744000:CDS | 35.0% | |
| AGGATAAGAAAGACGATGTA+GGG | + | chr5_1:64642357-64642376 | Msa0744000:CDS | 35.0% | |
| GAGGATAAGAAAGTCAATGA+AGG | + | chr5_1:64642428-64642447 | Msa0744000:CDS | 35.0% | |
| GGATAAGAAAGTCAATGAAG+GGG | + | chr5_1:64642430-64642449 | Msa0744000:CDS | 35.0% | |
| GATAAGAAAGTCAATGAAGG+GGG | + | chr5_1:64642431-64642450 | Msa0744000:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | chr5_1:64642537-64642556 | Msa0744000:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | chr5_1:64642537-64642556 | Msa0744000:CDS | 35.0% | |
| TAAAGGGGAAGAATTAAAGG+AGG | + | chr5_1:64642589-64642608 | Msa0744000:CDS | 35.0% | |
| TGAGAATGACAAATTCAGTG+AGG | + | chr5_1:64642673-64642692 | Msa0744000:CDS | 35.0% | |
| TATCCTTGAAAGCAAAGATG+AGG | + | chr5_1:64642772-64642791 | Msa0744000:CDS | 35.0% | |
| ATCCTTGAAAGCAAAGATGA+GGG | + | chr5_1:64642773-64642792 | Msa0744000:CDS | 35.0% | |
| GAAAAATCAAGAAGACAGAG+AGG | + | chr5_1:64642808-64642827 | Msa0744000:CDS | 35.0% | |
| AGATTGAAAAAAAGCGGGAA+AGG | + | chr5_1:64642887-64642906 | Msa0744000:CDS | 35.0% | |
| ! | CTTTTCAATGCTCTCATCTT+TGG | - | chr5_1:64642981-64643000 | None:intergenic | 35.0% |
| !! | CAAAGATGAGAGCATTGAAA+AGG | + | chr5_1:64642979-64642998 | Msa0744000:CDS | 35.0% |
| !! | GAGAAAGTATTGAAAAAGGG+TGG | + | chr5_1:64643076-64643095 | Msa0744000:CDS | 35.0% |
| GAAGGCGAAAAAGAAAATGA+AGG | + | chr5_1:64643114-64643133 | Msa0744000:CDS | 35.0% | |
| CAAATGGAACACTATACCAT+TGG | - | chr5_1:64643374-64643393 | None:intergenic | 35.0% | |
| AGAAGCAGAAACACGTATAT+AGG | - | chr5_1:64643471-64643490 | None:intergenic | 35.0% | |
| TACAAAAGAGGATTGTATGG+AGG | - | chr5_1:64643585-64643604 | None:intergenic | 35.0% | |
| ! | TCCATACAATCCTCTTTTGT+AGG | + | chr5_1:64643584-64643603 | Msa0744000:CDS | 35.0% |
| TCCTACAAAAGAGGATTGTA+TGG | - | chr5_1:64643588-64643607 | None:intergenic | 35.0% | |
| TATCCTTAACTATAGAGGTG+GGG | - | chr5_1:64643700-64643719 | None:intergenic | 35.0% | |
| ! | GGTAACCTTTTAACAGTCTA+AGG | - | chr5_1:64643736-64643755 | None:intergenic | 35.0% |
| !!! | TAAGGTTTTCTGGTTTTGTG+TGG | + | chr5_1:64643864-64643883 | Msa0744000:CDS | 35.0% |
| ! | TTTTGTGTGGCATGAAAATG+AGG | + | chr5_1:64643877-64643896 | Msa0744000:CDS | 35.0% |
| ! | TATGTTTGTAACTTGCAACC+AGG | + | chr5_1:64643900-64643919 | Msa0744000:intron | 35.0% |
| ATGTAACAAAGAGAAGTTGC+TGG | + | chr5_1:64644053-64644072 | Msa0744000:CDS | 35.0% | |
| CAAATACAAGGAAGGTTTGT+TGG | + | chr5_1:64644112-64644131 | Msa0744000:intron | 35.0% | |
| CATACAACAAATGTGTCAAC+AGG | - | chr5_1:64644145-64644164 | None:intergenic | 35.0% | |
| !! | CTGTTGACACATTTGTTGTA+TGG | + | chr5_1:64644143-64644162 | Msa0744000:intron | 35.0% |
| ACGACACGAGTATAATATTC+TGG | - | chr5_1:64644451-64644470 | None:intergenic | 35.0% | |
| !! | AGTCAACAAAAAAGGCATCA+AGG | - | chr5_1:64644514-64644533 | None:intergenic | 35.0% |
| ATCACTTGCAGAACAAGAAA+AGG | + | chr5_1:64644652-64644671 | Msa0744000:CDS | 35.0% | |
| AAAGTAACACACTAGGTTAG+AGG | - | chr5_1:64644710-64644729 | None:intergenic | 35.0% | |
| ! | CCCTATTTTCAGTCAACTAA+AGG | + | chr5_1:64644789-64644808 | Msa0744000:intron | 35.0% |
| GGGAAAAGGTTGAAAAGAAA+AGG | - | chr5_1:64645155-64645174 | None:intergenic | 35.0% | |
| AAATAACACACTAGGGGAAA+AGG | - | chr5_1:64645169-64645188 | None:intergenic | 35.0% | |
| ! | TCCTTTTATCAGTCGAGTAA+AGG | + | chr5_1:64645249-64645268 | Msa0744000:intron | 35.0% |
| TCCTTTACTCGACTGATAAA+AGG | - | chr5_1:64645253-64645272 | None:intergenic | 35.0% | |
| AAACAAGGTTCATCAAGATC+TGG | + | chr5_1:64645294-64645313 | Msa0744000:CDS | 35.0% | |
| AAACAAAGTTCATCGAGATC+TGG | + | chr5_1:64645770-64645789 | Msa0744000:CDS | 35.0% | |
| GAGAAAAGGATTTACTGACA+CGG | + | chr5_1:64645978-64645997 | Msa0744000:CDS | 35.0% | |
| ! | TTTTCATCCTTGGATTTGTC+AGG | - | chr5_1:64646066-64646085 | None:intergenic | 35.0% |
| ATGAGAAGAAAGTGAGTGAA+AGG | + | chr5_1:64646127-64646146 | Msa0744000:CDS | 35.0% | |
| TTCTTCCTTGAAAAGACCTT+GGG | - | chr5_1:64646306-64646325 | None:intergenic | 35.0% | |
| GAGGAAGAAGTTAAGGTAAT+GGG | - | chr5_1:64646875-64646894 | None:intergenic | 35.0% | |
| AGAGGAAGAAGTTAAGGTAA+TGG | - | chr5_1:64646876-64646895 | None:intergenic | 35.0% | |
| ATAAATTACGCCTCTAGTGA+AGG | + | chr5_1:64647163-64647182 | Msa0744000:intron | 35.0% | |
| !! | CGGAGAATTTTGAAGATAGA+AGG | + | chr5_1:64647403-64647422 | Msa0744000:intron | 35.0% |
| AAAATTGCTGACCATTGTTC+AGG | + | chr5_1:64647490-64647509 | Msa0744000:intron | 35.0% | |
| TCTTTACAGATGCCTTTCTT+GGG | - | chr5_1:64647540-64647559 | None:intergenic | 35.0% | |
| GACTGCTTGGATATATACAT+AGG | + | chr5_1:64647655-64647674 | Msa0744000:three_prime_UTR | 35.0% | |
| GCATGAAACTGCATAATTAC+TGG | - | chr5_1:64647824-64647843 | None:intergenic | 35.0% | |
| ! | ATGTAAAGAAGCTTTTGTGG+AGG | + | chr5_1:64647861-64647880 | Msa0744000:three_prime_UTR | 35.0% |
| CATCACTGTTTCAAACAGGT+TGG | - | chr5_1:64641618-64641637 | None:intergenic | 40.0% | |
| TTGTGAAATGGTGACTATGG+GGG | - | chr5_1:64641697-64641716 | None:intergenic | 40.0% | |
| AGATAACATTGGCATGAGTG+AGG | + | chr5_1:64641992-64642011 | Msa0744000:exon | 40.0% | |
| ! | TCTTTTCACTCGAGTCTTCT+AGG | - | chr5_1:64642070-64642089 | None:intergenic | 40.0% |
| AGAAGACTCGAGTGAAAAGA+AGG | + | chr5_1:64642070-64642089 | Msa0744000:CDS | 40.0% | |
| ! | ATTTTTCCTCCCTTAGGTTC+CGG | - | chr5_1:64642098-64642117 | None:intergenic | 40.0% |
| ATGGATAAGCAAGCTGATGA+TGG | + | chr5_1:64642209-64642228 | Msa0744000:CDS | 40.0% | |
| AACAATAACAAAACCGGGGA+TGG | + | chr5_1:64642248-64642267 | Msa0744000:CDS | 40.0% | |
| ACAATAACAAAACCGGGGAT+GGG | + | chr5_1:64642249-64642268 | Msa0744000:CDS | 40.0% | |
| GAGGATGAGAAAGTTGTTGA+AGG | + | chr5_1:64642284-64642303 | Msa0744000:CDS | 40.0% | |
| GAGGATAAGAAAGACGATGT+AGG | + | chr5_1:64642356-64642375 | Msa0744000:CDS | 40.0% | |
| GGATAAGAAAGACGATGTAG+GGG | + | chr5_1:64642358-64642377 | Msa0744000:CDS | 40.0% | |
| TGTAGGGGAAGAAAGAAAAG+AGG | + | chr5_1:64642373-64642392 | Msa0744000:CDS | 40.0% | |
| !! | GAAAGTTGATGTTAGGCAAG+AGG | + | chr5_1:64642400-64642419 | Msa0744000:CDS | 40.0% |
| TGTTAGGCAAGAGGTAAAAG+AGG | + | chr5_1:64642409-64642428 | Msa0744000:CDS | 40.0% | |
| AGGATAAGAAAGACGATGCA+GGG | + | chr5_1:64642501-64642520 | Msa0744000:CDS | 40.0% | |
| TGCAGGGGTAGAATTAAAAG+AGG | + | chr5_1:64642517-64642536 | Msa0744000:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | chr5_1:64642536-64642555 | Msa0744000:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | chr5_1:64642538-64642557 | Msa0744000:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | chr5_1:64642536-64642555 | Msa0744000:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | chr5_1:64642538-64642557 | Msa0744000:CDS | 40.0% | |
| TCATCCATGGCATCTAATTC+AGG | - | chr5_1:64642746-64642765 | None:intergenic | 40.0% | |
| AAGGATACTCTCTTCATCCA+TGG | - | chr5_1:64642759-64642778 | None:intergenic | 40.0% | |
| AGAAGACAGAGAGGATGATA+AGG | + | chr5_1:64642817-64642836 | Msa0744000:CDS | 40.0% | |
| CAGAGAGGATGATAAGGATA+AGG | + | chr5_1:64642823-64642842 | Msa0744000:CDS | 40.0% | |
| GAAAAAAAGCGGGAAAGGAA+AGG | + | chr5_1:64642892-64642911 | Msa0744000:CDS | 40.0% | |
| GAAGGAACTGAAGAAGATAG+AGG | + | chr5_1:64642943-64642962 | Msa0744000:CDS | 40.0% | |
| AAAGGAGAAAAGTCGAGATG+AGG | + | chr5_1:64642997-64643016 | Msa0744000:CDS | 40.0% | |
| GAAAATGAAGGAACTGAAGG+AGG | + | chr5_1:64643126-64643145 | Msa0744000:CDS | 40.0% | |
| ATTTCCTTTCACGTACAGGA+CGG | - | chr5_1:64643177-64643196 | None:intergenic | 40.0% | |
| ! | ACTGATTTCCTTTCACGTAC+AGG | - | chr5_1:64643181-64643200 | None:intergenic | 40.0% |
| GTGAAAGGAAATCAGTTCAG+CGG | + | chr5_1:64643185-64643204 | Msa0744000:CDS | 40.0% | |
| ! | TCTTGCGTTTTATGCTTCAG+TGG | + | chr5_1:64643516-64643535 | Msa0744000:CDS | 40.0% |
| ! | ACAATCCTCTTTTGTAGGAG+AGG | + | chr5_1:64643589-64643608 | Msa0744000:CDS | 40.0% |
| CTTGTATTTGCATTCCCAAC+TGG | - | chr5_1:64644102-64644121 | None:intergenic | 40.0% | |
| CAGTTGGGAATGCAAATACA+AGG | + | chr5_1:64644100-64644119 | Msa0744000:CDS | 40.0% | |
| TGGGAATGCAAATACAAGGA+AGG | + | chr5_1:64644104-64644123 | Msa0744000:CDS | 40.0% | |
| !! | AAAAGGCATCAAGGACTGAT+TGG | - | chr5_1:64644505-64644524 | None:intergenic | 40.0% |
| TGCGAAGCTAATAGACTTTC+TGG | + | chr5_1:64644604-64644623 | Msa0744000:CDS | 40.0% | |
| !! | GATACACTTGTTGTGACTTG+AGG | - | chr5_1:64644635-64644654 | None:intergenic | 40.0% |
| AAACAGCGCATAGCAAAACA+AGG | + | chr5_1:64644813-64644832 | Msa0744000:CDS | 40.0% | |
| ATAGCAAAACAAGGCTCAAC+AGG | + | chr5_1:64644822-64644841 | Msa0744000:CDS | 40.0% | |
| TCTGCTAAGGTGAGATTTCA+TGG | + | chr5_1:64644870-64644889 | Msa0744000:intron | 40.0% | |
| TAACTTGAGACGAGTGTTTC+TGG | + | chr5_1:64645199-64645218 | Msa0744000:intron | 40.0% | |
| ATCATCAAGACGTTCTGCTA+AGG | + | chr5_1:64645323-64645342 | Msa0744000:CDS | 40.0% | |
| CAAATCCAAGGATGAAAAGC+CGG | + | chr5_1:64646068-64646087 | Msa0744000:CDS | 40.0% | |
| ! | TGCAACGGATTCTTTCTTTC+TGG | - | chr5_1:64646166-64646185 | None:intergenic | 40.0% |
| AGTTAAAGCAAAACCACGCT+CGG | + | chr5_1:64646209-64646228 | Msa0744000:CDS | 40.0% | |
| TGAGTCGACAATGGTTTCTT+GGG | - | chr5_1:64646249-64646268 | None:intergenic | 40.0% | |
| TCCATCACTATCACCATGAT+CGG | - | chr5_1:64646280-64646299 | None:intergenic | 40.0% | |
| CTTCTTCCTTGAAAAGACCT+TGG | - | chr5_1:64646307-64646326 | None:intergenic | 40.0% | |
| ! | TTTGTCTTTGGAGGAAGACT+TGG | - | chr5_1:64646370-64646389 | None:intergenic | 40.0% |
| GTATCTACCTGCTTTGTCTT+TGG | - | chr5_1:64646382-64646401 | None:intergenic | 40.0% | |
| AGGGAATAATCTATTTGGGC+TGG | - | chr5_1:64646733-64646752 | None:intergenic | 40.0% | |
| ACTAATCACTAGAACGCGAA+AGG | - | chr5_1:64646799-64646818 | None:intergenic | 40.0% | |
| ! | CTTTCGGTAACCTTTTCTTC+TGG | - | chr5_1:64646932-64646951 | None:intergenic | 40.0% |
| TTGCGTAACTGATCATCACT+CGG | - | chr5_1:64646983-64647002 | None:intergenic | 40.0% | |
| CAACAGAAAACCTTCACTAG+AGG | - | chr5_1:64647176-64647195 | None:intergenic | 40.0% | |
| ACCGAGTAGCTTCAAAATGT+CGG | - | chr5_1:64647247-64647266 | None:intergenic | 40.0% | |
| CGAATTGCTTACCTGAACAA+TGG | - | chr5_1:64647504-64647523 | None:intergenic | 40.0% | |
| CTTTACAGATGCCTTTCTTG+GGG | - | chr5_1:64647539-64647558 | None:intergenic | 40.0% | |
| GTCTTTACAGATGCCTTTCT+TGG | - | chr5_1:64647541-64647560 | None:intergenic | 40.0% | |
| GACTATTATTCAGCAAGAGC+TGG | + | chr5_1:64647558-64647577 | Msa0744000:CDS | 40.0% | |
| CTTGTTCCCCATAAATTCCA+TGG | - | chr5_1:64647760-64647779 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGTGGAGGATTT+TGG | + | chr5_1:64647868-64647887 | Msa0744000:three_prime_UTR | 40.0% |
| TTTCACTCGAGTCTTCTAGG+TGG | - | chr5_1:64642067-64642086 | None:intergenic | 45.0% | |
| ! | TTTTTCCTCCCTTAGGTTCC+GGG | - | chr5_1:64642097-64642116 | None:intergenic | 45.0% |
| TGATAAGAAAGCTGATGGGG+AGG | + | chr5_1:64642175-64642194 | Msa0744000:CDS | 45.0% | |
| TGGGGAGGAAGAACTAGAAA+TGG | + | chr5_1:64642190-64642209 | Msa0744000:CDS | 45.0% | |
| CAATAACAAAACCGGGGATG+GGG | + | chr5_1:64642250-64642269 | Msa0744000:CDS | 45.0% | |
| ! | TTTTATTCCTTCCCCATCCC+CGG | - | chr5_1:64642264-64642283 | None:intergenic | 45.0% |
| GGATGGGGAAGGAATAAAAG+AGG | + | chr5_1:64642265-64642284 | Msa0744000:CDS | 45.0% | |
| TGAAGGGGGAGAGATAAAAG+AGG | + | chr5_1:64642445-64642464 | Msa0744000:CDS | 45.0% | |
| GAAGGGGGAGAGATAAAAGA+GGG | + | chr5_1:64642446-64642465 | Msa0744000:CDS | 45.0% | |
| AAGGGGGAGAGATAAAAGAG+GGG | + | chr5_1:64642447-64642466 | Msa0744000:CDS | 45.0% | |
| AGGGGAAGAAAGCTGATGAA+GGG | + | chr5_1:64642465-64642484 | Msa0744000:CDS | 45.0% | |
| GAGGATAAGAAAGACGATGC+AGG | + | chr5_1:64642500-64642519 | Msa0744000:CDS | 45.0% | |
| GGATAAGAAAGACGATGCAG+GGG | + | chr5_1:64642502-64642521 | Msa0744000:CDS | 45.0% | |
| GAAGCCTGAATTAGATGCCA+TGG | + | chr5_1:64642739-64642758 | Msa0744000:CDS | 45.0% | |
| TGCCCTCATCTTTGCTTTCA+AGG | - | chr5_1:64642778-64642797 | None:intergenic | 45.0% | |
| CAAAGATGAGGGCAGTGAAA+AGG | + | chr5_1:64642784-64642803 | Msa0744000:CDS | 45.0% | |
| ! | TGCTCTCATCTTTGGCTTCA+GGG | - | chr5_1:64642973-64642992 | None:intergenic | 45.0% |
| ! | ATGCTCTCATCTTTGGCTTC+AGG | - | chr5_1:64642974-64642993 | None:intergenic | 45.0% |
| AAAAGTCGAGATGAGGAGGT+GGG | + | chr5_1:64643004-64643023 | Msa0744000:CDS | 45.0% | |
| GTATTGAAAAAGGGTGGGAG+AGG | + | chr5_1:64643082-64643101 | Msa0744000:CDS | 45.0% | |
| AAGGAAATCAGTTCAGCGGT+TGG | + | chr5_1:64643189-64643208 | Msa0744000:CDS | 45.0% | |
| CCTTTCCTCTCCTACAAAAG+AGG | - | chr5_1:64643597-64643616 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGTAGGAGAGGAA+AGG | + | chr5_1:64643594-64643613 | Msa0744000:CDS | 45.0% |
| TCACCCCACCTCTATAGTTA+AGG | + | chr5_1:64643694-64643713 | Msa0744000:intron | 45.0% | |
| ATCTGCTTGACGTACCAGTT+GGG | + | chr5_1:64644085-64644104 | Msa0744000:CDS | 45.0% | |
| !! | ACATTTGTTGTATGGCAGCC+TGG | + | chr5_1:64644151-64644170 | Msa0744000:intron | 45.0% |
| CGACTATTATCAGCATTGCC+AGG | - | chr5_1:64644172-64644191 | None:intergenic | 45.0% | |
| CGTATTCATGCTGTACGCTT+TGG | + | chr5_1:64644190-64644209 | Msa0744000:intron | 45.0% | |
| TGAGTACGATGCATCTGTCA+AGG | + | chr5_1:64644474-64644493 | Msa0744000:intron | 45.0% | |
| CTACTCAAGACGAGTGTATC+TGG | + | chr5_1:64644739-64644758 | Msa0744000:intron | 45.0% | |
| AAACAAGGCTCAACAGGATC+TGG | + | chr5_1:64644828-64644847 | Msa0744000:CDS | 45.0% | |
| TTAGCAGATCGTCTTGACGT+TGG | - | chr5_1:64644858-64644877 | None:intergenic | 45.0% | |
| AACGTCAAGACGATCTGCTA+AGG | + | chr5_1:64644857-64644876 | Msa0744000:CDS | 45.0% | |
| CGCAAGCGCATAGAAAAACA+AGG | + | chr5_1:64645279-64645298 | Msa0744000:CDS | 45.0% | |
| TTACTTGAGACGAGCGTTTC+TGG | + | chr5_1:64645675-64645694 | Msa0744000:intron | 45.0% | |
| TGAAGATTCTTCCGTAGCAG+AGG | + | chr5_1:64645954-64645973 | Msa0744000:CDS | 45.0% | |
| ! | TCCTTTTCTCTCCTCTGCTA+CGG | - | chr5_1:64645968-64645987 | None:intergenic | 45.0% |
| TGAGTCTGAGGAAGAACAGA+AGG | + | chr5_1:64646005-64646024 | Msa0744000:CDS | 45.0% | |
| CACTGTTCCTGACAAATCCA+AGG | + | chr5_1:64646056-64646075 | Msa0744000:CDS | 45.0% | |
| ! | TTTCTCCGGCTTTTCATCCT+TGG | - | chr5_1:64646076-64646095 | None:intergenic | 45.0% |
| AAGCCGGAGAAATCTGAAAG+TGG | + | chr5_1:64646084-64646103 | Msa0744000:CDS | 45.0% | |
| AGCCGGAGAAATCTGAAAGT+GGG | + | chr5_1:64646085-64646104 | Msa0744000:CDS | 45.0% | |
| TCCCCACTTTCAGATTTCTC+CGG | - | chr5_1:64646090-64646109 | None:intergenic | 45.0% | |
| GTGAGTCGACAATGGTTTCT+TGG | - | chr5_1:64646250-64646269 | None:intergenic | 45.0% | |
| ! | TCCGATCATGGTGATAGTGA+TGG | + | chr5_1:64646276-64646295 | Msa0744000:CDS | 45.0% |
| ! | TGATAGTGATGGAAGTCCCA+AGG | + | chr5_1:64646287-64646306 | Msa0744000:CDS | 45.0% |
| ! | GAAGTCCCAAGGTCTTTTCA+AGG | + | chr5_1:64646298-64646317 | Msa0744000:CDS | 45.0% |
| TCTTCCTCCAAAGACAAAGC+AGG | + | chr5_1:64646372-64646391 | Msa0744000:CDS | 45.0% | |
| TCTACCTGCTTTGTCTTTGG+AGG | - | chr5_1:64646379-64646398 | None:intergenic | 45.0% | |
| TGCGTAACTGATCATCACTC+GGG | - | chr5_1:64646982-64647001 | None:intergenic | 45.0% | |
| !! | ACATTTTCTCCCGCTTTTGC+AGG | + | chr5_1:64647212-64647231 | Msa0744000:intron | 45.0% |
| CAAATGTAGCCTGCAAAAGC+GGG | - | chr5_1:64647224-64647243 | None:intergenic | 45.0% | |
| GCAAATGTAGCCTGCAAAAG+CGG | - | chr5_1:64647225-64647244 | None:intergenic | 45.0% | |
| !!! | GCCGACATTTTGAAGCTACT+CGG | + | chr5_1:64647243-64647262 | Msa0744000:CDS | 45.0% |
| TTCAGGTAAGCAATTCGACG+TGG | + | chr5_1:64647507-64647526 | Msa0744000:intron | 45.0% | |
| AAGAGAACGAAGAGAACGAC+AGG | + | chr5_1:64647606-64647625 | Msa0744000:CDS | 45.0% | |
| AGAGAACGAAGAGAACGACA+GGG | + | chr5_1:64647607-64647626 | Msa0744000:CDS | 45.0% | |
| AAGCAGTCACACCTAATCCT+CGG | - | chr5_1:64647643-64647662 | None:intergenic | 45.0% | |
| TTTATGGGGAACAAGCCAGT+AGG | + | chr5_1:64647765-64647784 | Msa0744000:three_prime_UTR | 45.0% | |
| CTCGAGTGAAAAGAAGGACC+CGG | + | chr5_1:64642076-64642095 | Msa0744000:CDS | 50.0% | |
| AAAGAAGGACCCGGAACCTA+AGG | + | chr5_1:64642085-64642104 | Msa0744000:CDS | 50.0% | |
| AAGAAGGACCCGGAACCTAA+GGG | + | chr5_1:64642086-64642105 | Msa0744000:CDS | 50.0% | |
| GAGGACAAGCATGCTGATGA+AGG | + | chr5_1:64642320-64642339 | Msa0744000:CDS | 50.0% | |
| GAGGGGAAGAAAGCTGATGA+AGG | + | chr5_1:64642464-64642483 | Msa0744000:CDS | 50.0% | |
| GGGGAAGAAAGCTGATGAAG+GGG | + | chr5_1:64642466-64642485 | Msa0744000:CDS | 50.0% | |
| AGCGGGAAAGGAAAGGTTGA+TGG | + | chr5_1:64642899-64642918 | Msa0744000:CDS | 50.0% | |
| ! | GCGGGAAAGGAAAGGTTGAT+GGG | + | chr5_1:64642900-64642919 | Msa0744000:CDS | 50.0% |
| !! | CGGGAAAGGAAAGGTTGATG+GGG | + | chr5_1:64642901-64642920 | Msa0744000:CDS | 50.0% |
| GGAGAAAAGTCGAGATGAGG+AGG | + | chr5_1:64643000-64643019 | Msa0744000:CDS | 50.0% | |
| GAAAAGTCGAGATGAGGAGG+TGG | + | chr5_1:64643003-64643022 | Msa0744000:CDS | 50.0% | |
| AAAGGGTGGGAGAGGAAATG+TGG | + | chr5_1:64643090-64643109 | Msa0744000:CDS | 50.0% | |
| TGGGAGAGGAAATGTGGAGA+AGG | + | chr5_1:64643096-64643115 | Msa0744000:CDS | 50.0% | |
| ! | CGGTTGGTTGTAGGAGTTGT+TGG | - | chr5_1:64643157-64643176 | None:intergenic | 50.0% |
| TCTTTCACTTTGCAGGGTCG+TGG | + | chr5_1:64643328-64643347 | Msa0744000:intron | 50.0% | |
| GATCTGCTTGACGTACCAGT+TGG | + | chr5_1:64644084-64644103 | Msa0744000:CDS | 50.0% | |
| CTTAGCAGAACGTCTTGACG+TGG | - | chr5_1:64645801-64645820 | None:intergenic | 50.0% | |
| CACGTCAAGACGTTCTGCTA+AGG | + | chr5_1:64645799-64645818 | Msa0744000:CDS | 50.0% | |
| TCCGTAGCAGAGGAGAGAAA+AGG | + | chr5_1:64645964-64645983 | Msa0744000:CDS | 50.0% | |
| TGACACGGAAGATGAGTCTG+AGG | + | chr5_1:64645993-64646012 | Msa0744000:CDS | 50.0% | |
| GCCGGAGAAATCTGAAAGTG+GGG | + | chr5_1:64646086-64646105 | Msa0744000:CDS | 50.0% | |
| GATGCAGAGTGAGTCGACAA+TGG | - | chr5_1:64646258-64646277 | None:intergenic | 50.0% | |
| ACTCACTCTGCATCCGATCA+TGG | + | chr5_1:64646264-64646283 | Msa0744000:CDS | 50.0% | |
| !! | GGAAGACTTGGTGAGAGTTG+AGG | - | chr5_1:64646358-64646377 | None:intergenic | 50.0% |
| GTAATGCCTGACCGAGGATT+AGG | + | chr5_1:64647629-64647648 | Msa0744000:exon | 50.0% | |
| GAGGATTAGGTGTGACTGCT+TGG | + | chr5_1:64647642-64647661 | Msa0744000:three_prime_UTR | 50.0% | |
| AACAAAACCGGGGATGGGGA+AGG | + | chr5_1:64642254-64642273 | Msa0744000:CDS | 55.0% | |
| AGATGAGGAGGTGGGCGATA+AGG | + | chr5_1:64643012-64643031 | Msa0744000:CDS | 55.0% | |
| GGAGGTGGGCGATAAGGATA+AGG | + | chr5_1:64643018-64643037 | Msa0744000:CDS | 55.0% | |
| ! | CGTACAGGACGGTTGGTTGT+AGG | - | chr5_1:64643166-64643185 | None:intergenic | 55.0% |
| CCTTTCACGTACAGGACGGT+TGG | - | chr5_1:64643173-64643192 | None:intergenic | 55.0% | |
| CCAACCGTCCTGTACGTGAA+AGG | + | chr5_1:64643170-64643189 | Msa0744000:CDS | 55.0% | |
| AAAACCACGCTCGGCACGAA+AGG | + | chr5_1:64646218-64646237 | Msa0744000:CDS | 55.0% | |
| AAACCACGCTCGGCACGAAA+GGG | + | chr5_1:64646219-64646238 | Msa0744000:CDS | 55.0% | |
| CGTGGATCTCACCCCAAGAA+AGG | + | chr5_1:64647525-64647544 | Msa0744000:CDS | 55.0% | |
| GTCACACCTAATCCTCGGTC+AGG | - | chr5_1:64647638-64647657 | None:intergenic | 55.0% | |
| AAGGACCCGGAACCTAAGGG+AGG | + | chr5_1:64642089-64642108 | Msa0744000:CDS | 60.0% | |
| GACAGGGTAATGCCTGACCG+AGG | + | chr5_1:64647623-64647642 | Msa0744000:exon | 60.0% | |
| GTTCCCTTTCGTGCCGAGCG+TGG | - | chr5_1:64646225-64646244 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 64641462 | 64647964 | 64641462 | ID=Msa0744000;Name=Msa0744000 |
| chr5_1 | mRNA | 64641462 | 64647964 | 64641462 | ID=Msa0744000-mRNA-1;Parent=Msa0744000;Name=Msa0744000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=457|0.93|0.93|1|0.93|0.87|16|325|964 |
| chr5_1 | exon | 64641462 | 64641866 | 64641462 | ID=Msa0744000-mRNA-1:exon:19091;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64641953 | 64643258 | 64641953 | ID=Msa0744000-mRNA-1:exon:19092;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64643343 | 64643376 | 64643343 | ID=Msa0744000-mRNA-1:exon:19093;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64643500 | 64643615 | 64643500 | ID=Msa0744000-mRNA-1:exon:19094;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64643839 | 64643898 | 64643839 | ID=Msa0744000-mRNA-1:exon:19095;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64644015 | 64644125 | 64644015 | ID=Msa0744000-mRNA-1:exon:19096;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64644593 | 64644673 | 64644593 | ID=Msa0744000-mRNA-1:exon:19097;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64644801 | 64644878 | 64644801 | ID=Msa0744000-mRNA-1:exon:19098;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64645000 | 64645137 | 64645000 | ID=Msa0744000-mRNA-1:exon:19099;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64645261 | 64645344 | 64645261 | ID=Msa0744000-mRNA-1:exon:19100;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64645482 | 64645613 | 64645482 | ID=Msa0744000-mRNA-1:exon:19101;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64645737 | 64645820 | 64645737 | ID=Msa0744000-mRNA-1:exon:19102;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64645940 | 64646393 | 64645940 | ID=Msa0744000-mRNA-1:exon:19103;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64646933 | 64647042 | 64646933 | ID=Msa0744000-mRNA-1:exon:19104;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64647234 | 64647264 | 64647234 | ID=Msa0744000-mRNA-1:exon:19105;Parent=Msa0744000-mRNA-1 |
| chr5_1 | exon | 64647512 | 64647964 | 64647512 | ID=Msa0744000-mRNA-1:exon:19106;Parent=Msa0744000-mRNA-1 |
| chr5_1 | five_prime_UTR | 64641462 | 64641866 | 64641462 | ID=Msa0744000-mRNA-1:five_prime_utr;Parent=Msa0744000-mRNA-1 |
| chr5_1 | five_prime_UTR | 64641953 | 64642004 | 64641953 | ID=Msa0744000-mRNA-1:five_prime_utr;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64642005 | 64643258 | 64642005 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64643343 | 64643376 | 64643343 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64643500 | 64643615 | 64643500 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64643839 | 64643898 | 64643839 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64644015 | 64644125 | 64644015 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64644593 | 64644673 | 64644593 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64644801 | 64644878 | 64644801 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64645000 | 64645137 | 64645000 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64645261 | 64645344 | 64645261 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64645482 | 64645613 | 64645482 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64645737 | 64645820 | 64645737 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64645940 | 64646393 | 64645940 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64646933 | 64647042 | 64646933 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64647234 | 64647264 | 64647234 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | CDS | 64647512 | 64647639 | 64647512 | ID=Msa0744000-mRNA-1:cds;Parent=Msa0744000-mRNA-1 |
| chr5_1 | three_prime_UTR | 64647640 | 64647964 | 64647640 | ID=Msa0744000-mRNA-1:three_prime_utr;Parent=Msa0744000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
